AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0170200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170200 MtrunA17_Chr5g0443891 92.654 2110 108 7 1 2065 1 2108 0.0 3768
Msa0170200 MtrunA17_Chr5g0443841 43.590 117 55 5 1554 1665 36 146 3.25e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0170200 AT3G06530.4 44.553 1533 726 37 626 2069 713 2210 0.0 1099
Msa0170200 AT3G06530.4 48.988 692 321 13 1 665 1 687 3.24e-178 599
Msa0170200 AT3G06530.5 44.553 1533 726 37 626 2069 711 2208 0.0 1099
Msa0170200 AT3G06530.5 49.275 690 320 12 1 665 1 685 1.03e-179 603
Msa0170200 AT3G06530.1 44.780 1523 726 37 626 2069 711 2197 0.0 1099
Msa0170200 AT3G06530.1 49.275 690 320 12 1 665 1 685 9.05e-180 603
Msa0170200 AT3G06530.3 44.481 1522 721 38 626 2069 713 2188 0.0 1081
Msa0170200 AT3G06530.3 48.988 692 321 13 1 665 1 687 2.50e-178 599
Msa0170200 AT3G06530.2 44.256 1532 721 38 626 2069 713 2199 0.0 1081
Msa0170200 AT3G06530.2 48.988 692 321 13 1 665 1 687 2.47e-178 599

Find 398 sgRNAs with CRISPR-Local

Find 1127 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAGTGTTTGAAAATTTC+TGG 0.082321 1_4:-54121641 None:intergenic
ATTGATATTCTTCCAGTTAT+TGG 0.102959 1_4:+54124317 Msa0170200:CDS
TACAACAGGGTTCCAGTTTC+TGG 0.138676 1_4:+54120324 Msa0170200:intron
AGAAATACTTGAGTTCATTT+TGG 0.152846 1_4:+54121292 Msa0170200:CDS
ATTATCACCTGCAGATAATT+AGG 0.158360 1_4:-54114243 None:intergenic
TGTTGACCAGTCAATGTTTC+TGG 0.167580 1_4:+54125118 Msa0170200:CDS
CTTCTGTGCTCAACAATTTC+AGG 0.172948 1_4:-54124758 None:intergenic
AATGCCACCTTTCCTTTAAA+TGG 0.183419 1_4:-54129062 None:intergenic
ATCTCTAATTCCATTTAAAA+AGG 0.186771 1_4:-54129184 None:intergenic
TTGGAAGTGTGTCAACATTT+TGG 0.188777 1_4:-54114008 None:intergenic
ATCAATGCTGTCTAATTTAA+TGG 0.189325 1_4:+54121587 Msa0170200:CDS
CCGTATTTGAAACTACTTTC+TGG 0.193440 1_4:+54111791 Msa0170200:CDS
TGCTGTTGTTGTTGAAGTTT+TGG 0.200325 1_4:+54112386 Msa0170200:CDS
ATTTCCTCTCTGTTCATAAA+AGG 0.208310 1_4:-54125090 None:intergenic
ACATGCTCTCTGTAAGCTTT+AGG 0.211122 1_4:-54127460 None:intergenic
AAGTTATGGCTTGCATATTT+TGG 0.215559 1_4:+54119058 Msa0170200:CDS
AATCCTTCAAAGAATGTAAT+TGG 0.216676 1_4:+54112354 Msa0170200:CDS
GCTGCAAGGCAGTAGGGTTT+AGG 0.219910 1_4:-54111233 None:intergenic
GATATGTTGGCAACATTTAT+TGG 0.222201 1_4:+54127290 Msa0170200:CDS
AACATATTATGGCCATTTAA+AGG 0.225353 1_4:+54129050 Msa0170200:three_prime_UTR
TTCTGTTAAGGAATGGTATA+TGG 0.227314 1_4:+54112135 Msa0170200:intron
CTTTCCTTGCTCAAGGGAAT+TGG 0.240940 1_4:+54121549 Msa0170200:CDS
TGGATGTCAAACTGATATTT+TGG 0.241563 1_4:+54119927 Msa0170200:CDS
TATGATCATTTGCAGTTCTA+AGG 0.249022 1_4:+54114331 Msa0170200:intron
TAAGATGTTGGATGGCAATT+TGG 0.271688 1_4:+54114982 Msa0170200:CDS
AATGTTTCTGGAGTTGTTTC+TGG 0.274972 1_4:+54125130 Msa0170200:CDS
ATGATGAACAGAGTCATTTA+TGG 0.277685 1_4:-54114399 None:intergenic
GGTATATGGGAGTTTCTTAA+AGG 0.279802 1_4:+54112149 Msa0170200:CDS
CAAGATTGATTAAGGCAATA+AGG 0.280374 1_4:-54113846 None:intergenic
TCGCTAAGAAGTTTAAATAA+AGG 0.280802 1_4:-54123887 None:intergenic
CTCTTATCAGCGGCTTCTTT+AGG 0.291025 1_4:-54111473 None:intergenic
CTGCAAGGCAGTAGGGTTTA+GGG 0.292602 1_4:-54111232 None:intergenic
TCAAGTTTCGACAGTGCTTT+TGG 0.294129 1_4:-54126836 None:intergenic
GCTGCGTTGATCAAAGTTCT+TGG 0.297231 1_4:+54126812 Msa0170200:CDS
AGAATTGAGAAGTTAGGGTT+AGG 0.306103 1_4:-54111322 None:intergenic
GATAAAGTCCTCTAAGGATT+TGG 0.308192 1_4:+54126874 Msa0170200:CDS
GAAGGAAGAATTGAGAAGTT+AGG 0.308727 1_4:-54111328 None:intergenic
CGCTAAGAAGTTTAAATAAA+GGG 0.309156 1_4:-54123886 None:intergenic
GAATGCTGGTGATGTTCTTT+TGG 0.309414 1_4:+54118845 Msa0170200:CDS
CTAAAGATCTTCATTGGTTT+CGG 0.310067 1_4:+54113818 Msa0170200:CDS
TTTGCATATTTGGAGGTAAT+AGG 0.311235 1_4:-54120465 None:intergenic
CTGTCAAGGGCTGGCATCTC+AGG 0.316846 1_4:+54128082 Msa0170200:CDS
ATATCTCGATGTCAAAAGTT+TGG 0.318754 1_4:+54115017 Msa0170200:CDS
TCTAGTTTGAACAACAATTC+AGG 0.319024 1_4:-54125185 None:intergenic
AGAAGGCTCTCTTGTCATTC+AGG 0.319624 1_4:+54125214 Msa0170200:CDS
TTAGAAGTTCTTCCAGAAAC+TGG 0.324863 1_4:-54120336 None:intergenic
CTTTGTACTCTGCAGCAAAA+TGG 0.327871 1_4:+54119907 Msa0170200:CDS
CTCTTTACAGAAAGTGTTGC+AGG 0.331318 1_4:+54121815 Msa0170200:CDS
ATATATCCTTTCGTGAATTC+TGG 0.333723 1_4:+54112441 Msa0170200:CDS
CGTGTTCTTCTTCTTCGTTT+TGG 0.336037 1_4:-54111287 None:intergenic
AATGGCCATAATATGTTCAT+TGG 0.337522 1_4:-54129044 None:intergenic
TCTATTCCTGAGACAAATTC+TGG 0.343670 1_4:-54127040 None:intergenic
AGCGTTGTTCACGTCCTCAC+TGG 0.343696 1_4:+54120411 Msa0170200:CDS
CATGCTCTCTGTAAGCTTTA+GGG 0.347308 1_4:-54127459 None:intergenic
TTGAGCAGCGATGGTGTAAA+TGG 0.347980 1_4:-54111504 None:intergenic
GTAGACCAATGAACATATTA+TGG 0.352074 1_4:+54129039 Msa0170200:three_prime_UTR
AGTTCAAAACATTGATTTAG+TGG 0.354050 1_4:+54127403 Msa0170200:CDS
TTTATCTTCAATTAACTTGA+AGG 0.354964 1_4:+54118468 Msa0170200:CDS
CTGCTTGATATAAATTCTTC+GGG 0.357022 1_4:+54115208 Msa0170200:CDS
CTAAGAAATGGAGGTGTTCA+TGG 0.357685 1_4:-54119494 None:intergenic
TGTTTCTGTTCTTGTTACTT+TGG 0.358918 1_4:+54126943 Msa0170200:CDS
TATCTGCGATTGTTCCTTGT+TGG 0.359436 1_4:+54124578 Msa0170200:CDS
TTGAATATGATTTACAGTTT+CGG 0.362706 1_4:-54123984 None:intergenic
TGTTAAGTTACACGCTTTGC+GGG 0.365295 1_4:+54120206 Msa0170200:CDS
TCAATTCTACACGGGGTTGC+AGG 0.365876 1_4:+54121994 Msa0170200:CDS
GATAGGGCCATATCTTTCTA+TGG 0.367033 1_4:+54127548 Msa0170200:CDS
TGCTGCACTATAACCATTCT+AGG 0.367211 1_4:-54112197 None:intergenic
TCCTTCTCTTCTTGTTCCAT+TGG 0.368665 1_4:+54119957 Msa0170200:CDS
AGATTGCCTGATGATTTATC+TGG 0.368678 1_4:-54119102 None:intergenic
TACCTGGACAAGATTGATTA+AGG 0.369079 1_4:-54113854 None:intergenic
TTTCCTTGCTCAAGGGAATT+GGG 0.371626 1_4:+54121550 Msa0170200:CDS
CACACAAGTTGATAGGATCT+TGG 0.372295 1_4:-54114429 None:intergenic
ATCATCAAACTGTCTCAATA+TGG 0.372395 1_4:-54116511 None:intergenic
AACTGTCTCAATATGGCCTC+TGG 0.372558 1_4:-54116504 None:intergenic
AAAATTGGCTGGCAATTTCA+TGG 0.372685 1_4:+54118498 Msa0170200:CDS
TCACGTGTACTCCAGGCTCT+TGG 0.376330 1_4:+54126458 Msa0170200:intron
ACTGCTTGATATAAATTCTT+CGG 0.376474 1_4:+54115207 Msa0170200:CDS
CAGAAAGCAGAGAAAATATA+TGG 0.378151 1_4:-54124253 None:intergenic
GAAATTCTTTGCAGTCTGTA+AGG 0.379461 1_4:+54120163 Msa0170200:intron
GAGTCAACTCGGAGAGCTTA+TGG 0.379771 1_4:+54125908 Msa0170200:intron
TGTTCACTTCCTTAGTTTCA+AGG 0.380452 1_4:+54124937 Msa0170200:CDS
CAGTCCCCAGAGTAAAGAAT+TGG 0.381140 1_4:+54111715 Msa0170200:CDS
CACCAAAGTGTGGCAAAATT+AGG 0.381449 1_4:+54123627 Msa0170200:CDS
TGCATTTAGAGGTCCGAGTT+TGG 0.383943 1_4:-54119034 None:intergenic
TTGATGATAGTTTGCTTGCT+TGG 0.385008 1_4:+54113715 Msa0170200:CDS
CTTGAACCTTTGTTGCCTTT+AGG 0.387639 1_4:-54126527 None:intergenic
ACAGCTGATTCTCCAATAAC+TGG 0.392134 1_4:-54124329 None:intergenic
AAGTTCTCGTTGGCTTCAAT+TGG 0.392921 1_4:+54126559 Msa0170200:CDS
AAAGTTTCTCATTGTTCTGT+TGG 0.393136 1_4:+54114216 Msa0170200:CDS
GGTTTGATACGTTCAGTTGC+CGG 0.395567 1_4:+54113772 Msa0170200:CDS
AAGCCAATTACATTCTTTGA+AGG 0.395856 1_4:-54112357 None:intergenic
GTCTGTAAGGGTTGCTTCCA+TGG 0.396373 1_4:+54120176 Msa0170200:intron
GAATTGAGAAGTTAGGGTTA+GGG 0.397023 1_4:-54111321 None:intergenic
AACAATTGTGTTTGATATGT+TGG 0.397730 1_4:+54127277 Msa0170200:CDS
TATTCTAGCTCGTGTCTTCT+CGG 0.397937 1_4:-54128777 None:intergenic
CTCTATCCAATTCTTTACTC+TGG 0.397972 1_4:-54111721 None:intergenic
ACCAATCGATATTATCTTCA+TGG 0.398205 1_4:-54118525 None:intergenic
GACCGTGATAAAGTCCTCTA+AGG 0.400034 1_4:+54126868 Msa0170200:CDS
GTACAAAATGTTAAAGCATC+TGG 0.400035 1_4:-54124990 None:intergenic
GAAGACACGAGCTAGAATAT+TGG 0.402292 1_4:+54128781 Msa0170200:CDS
CTAAGCAAGTATTTGAAGTA+AGG 0.403689 1_4:-54127943 None:intergenic
TCTGAAAGATCCTTCTTATC+AGG 0.405015 1_4:-54112471 None:intergenic
AAGGAAGAATTGAGAAGTTA+GGG 0.405988 1_4:-54111327 None:intergenic
CGGAAAGACTTGACGGCGGT+TGG 0.408112 1_4:-54123964 None:intergenic
TTAGCACCGATGAAAGGTTT+AGG 0.409118 1_4:+54111672 Msa0170200:CDS
TACCCAACTGCTGTTGAGGC+TGG 0.410333 1_4:+54127242 Msa0170200:CDS
GTACATCACCATTAGCATTA+CGG 0.411573 1_4:-54122371 None:intergenic
TAATAGTCAAAGAAATTAAC+TGG 0.411747 1_4:+54117973 Msa0170200:CDS
ATAGTTTCACACAAGTTGAT+AGG 0.411967 1_4:-54114436 None:intergenic
GGACTTAAATTTAAAAGCTC+TGG 0.412126 1_4:+54117950 Msa0170200:CDS
CGTCTCAATATTGAGGAAAC+AGG 0.412781 1_4:-54124967 None:intergenic
TACCTCCAAATATGCAAAAC+AGG 0.412938 1_4:+54120470 Msa0170200:CDS
AGGAGGCTAAAGATCTTCAT+TGG 0.414016 1_4:+54113812 Msa0170200:CDS
AGATCAAGTTGAGAAACAAT+AGG 0.414597 1_4:-54128478 None:intergenic
CGTTGAACTGCTTGAGGATG+TGG 0.415239 1_4:+54128883 Msa0170200:CDS
CATATGCAGAATAGATAATC+TGG 0.415561 1_4:+54123706 Msa0170200:CDS
GCAGGATGATAGCAAGATAA+AGG 0.416003 1_4:+54119428 Msa0170200:intron
CAGAGAAAATATATGGTTGC+GGG 0.417767 1_4:-54124246 None:intergenic
TCTAGCAATGGCAAATTCCT+TGG 0.418379 1_4:+54111361 Msa0170200:exon
CCAGAAAGTAGTTTCAAATA+CGG 0.419098 1_4:-54111791 None:intergenic
TCCATTGGCCGGTGATGATC+AGG 0.421713 1_4:+54119972 Msa0170200:CDS
CTGATCATGGAAGTATGATA+TGG 0.423107 1_4:-54117752 None:intergenic
CACGTGTACTCCAGGCTCTT+GGG 0.423504 1_4:+54126459 Msa0170200:intron
AACTGTGTAATGTCTTCTTC+AGG 0.424258 1_4:+54121774 Msa0170200:CDS
TGAAACTGCTGCCACTTTCA+AGG 0.426613 1_4:-54126660 None:intergenic
AAGACACGAGCTAGAATATT+GGG 0.426925 1_4:+54128782 Msa0170200:CDS
TTATCACCTGCAGATAATTA+GGG 0.429558 1_4:-54114242 None:intergenic
TGATGAACAGAGTCATTTAT+GGG 0.430170 1_4:-54114398 None:intergenic
TTGTTGTTCAAACTAGAATC+AGG 0.430374 1_4:+54125191 Msa0170200:CDS
GGTCAAATGGCGGTCACAGC+TGG 0.430545 1_4:+54128580 Msa0170200:CDS
TTCTGTTCTTGTTACTTTGG+AGG 0.431905 1_4:+54126946 Msa0170200:CDS
TTGTTAAGTTACACGCTTTG+CGG 0.433714 1_4:+54120205 Msa0170200:CDS
TGTTGTTTGCATCGGTCAAA+TGG 0.435055 1_4:+54128567 Msa0170200:CDS
AGATGGGGTGCATTTGAGGC+TGG 0.435141 1_4:-54126920 None:intergenic
AACAAGATGGGGTGCATTTG+AGG 0.436206 1_4:-54126924 None:intergenic
CAGATAGATTTCAAAACTGT+TGG 0.436222 1_4:+54123581 Msa0170200:intron
GTCGATGAAACTGTATCTTC+AGG 0.437715 1_4:+54127518 Msa0170200:CDS
TCCTCACTGGGGTCCACACC+GGG 0.439221 1_4:+54120424 Msa0170200:CDS
GCGTTGTTCACGTCCTCACT+GGG 0.440734 1_4:+54120412 Msa0170200:CDS
TCGAGAAGCTTAGAAGAATC+TGG 0.442401 1_4:-54116588 None:intergenic
ATCTTCTAATAATAGATTCA+AGG 0.442427 1_4:-54126739 None:intergenic
AAGATTGATTAAGGCAATAA+GGG 0.442710 1_4:-54113845 None:intergenic
AGTAACTGTGTTCATCATCT+TGG 0.443392 1_4:+54127964 Msa0170200:CDS
TTTCTTATAGGGATTTGCCT+GGG 0.443564 1_4:+54114158 Msa0170200:intron
TCGATGTCAAAAGTTTGGTT+TGG 0.445202 1_4:+54115022 Msa0170200:CDS
ACCTCTAAATGCAAAAGTTA+TGG 0.445268 1_4:+54119044 Msa0170200:CDS
ACTGGGAAATTCTCCAACTA+CGG 0.446747 1_4:+54121320 Msa0170200:CDS
TGGTTGTGTTTCAGGATTGG+AGG 0.446865 1_4:+54111643 Msa0170200:intron
CTAGAATTGTGTAATCATAT+AGG 0.447034 1_4:+54129005 Msa0170200:three_prime_UTR
AACATTGATTTAGTGGAAGA+AGG 0.447201 1_4:+54127410 Msa0170200:CDS
TTAGGATCGAACAAGATAGA+AGG 0.448135 1_4:-54111455 None:intergenic
CTCACAAGCACGAGCAATCC+CGG 0.449224 1_4:-54113791 None:intergenic
AGATAAAGATGTTGGAGAAA+AGG 0.450730 1_4:+54126103 Msa0170200:CDS
TCTCTTCTTGTTCCATTGGC+CGG 0.453208 1_4:+54119961 Msa0170200:CDS
CACACTTCCAACGAAGGCCT+TGG 0.454043 1_4:+54114020 Msa0170200:CDS
TCATTCAAAGCATGTATTTG+AGG 0.454056 1_4:+54124549 Msa0170200:CDS
CTGAAATTGTTGAGCACAGA+AGG 0.454487 1_4:+54124759 Msa0170200:CDS
ATGCAAGGCTCTACATAAGC+AGG 0.456426 1_4:-54121947 None:intergenic
GGTGGCTTTCCTTGAAACTA+AGG 0.458786 1_4:-54124946 None:intergenic
TGAACTGTGCTGCTAAGAAA+TGG 0.461333 1_4:-54119506 None:intergenic
TCTATCCAATTCTTTACTCT+GGG 0.461382 1_4:-54111720 None:intergenic
GGAAAGACTTGACGGCGGTT+GGG 0.464408 1_4:-54123963 None:intergenic
GGTTCAGAGGTTGCCACAAA+AGG 0.464770 1_4:-54128609 None:intergenic
TCAAATGTCAATTAGCTGGC+TGG 0.465347 1_4:+54114744 Msa0170200:intron
TACCATGCCATAGAAAGATA+TGG 0.465493 1_4:-54127555 None:intergenic
TTCAGTTAAATCTCTTGCAC+AGG 0.468315 1_4:+54128910 Msa0170200:CDS
TTGATAGAGGAAATTTCAGT+TGG 0.469921 1_4:+54111192 None:intergenic
CTCAAGCAGTTCAACGAGGA+TGG 0.471313 1_4:-54128876 None:intergenic
GACTCAACATCTTCGATGTC+AGG 0.472414 1_4:+54114473 Msa0170200:CDS
GTTTGATACGTTCAGTTGCC+GGG 0.473503 1_4:+54113773 Msa0170200:CDS
TGCCTTAATCAATCTTGTCC+AGG 0.474061 1_4:+54113852 Msa0170200:CDS
CACACTTTGGTGCAAGTATG+AGG 0.477598 1_4:-54123616 None:intergenic
AGGTAATAGGATATTATGAT+AGG 0.478047 1_4:-54120452 None:intergenic
GATGGGGTGCATTTGAGGCT+GGG 0.478686 1_4:-54126919 None:intergenic
ACCCAACTGCTGTTGAGGCT+GGG 0.479632 1_4:+54127243 Msa0170200:CDS
TCCCCAGCCTCAACAGCAGT+TGG 0.481565 1_4:-54127245 None:intergenic
CATTGTGAGGAAAGAGTTGA+AGG 0.483626 1_4:+54125992 Msa0170200:CDS
GCGTCAAACCTTCCCGTAGT+TGG 0.484266 1_4:-54121333 None:intergenic
CTTCGTCCAGAATTTGTCTC+AGG 0.484756 1_4:+54127034 Msa0170200:CDS
ATAGAGGAAATTTCAGTTGG+CGG 0.486354 1_4:+54111195 Msa0170200:five_prime_UTR
GCAGTTGTTGTCAAACTTGG+TGG 0.487519 1_4:+54126968 Msa0170200:CDS
CAGAGTAAAGAATTGGATAG+AGG 0.488546 1_4:+54111722 Msa0170200:CDS
AGCTTTAAATGTCGATGGCT+TGG 0.489294 1_4:+54116557 Msa0170200:CDS
TGATAATATTGCTGAAGAAA+CGG 0.490134 1_4:+54118004 Msa0170200:CDS
TGACAACAACATCAGTAGTC+CGG 0.490271 1_4:-54124223 None:intergenic
ACAGACTCTATTGATTATCC+TGG 0.490500 1_4:+54124006 Msa0170200:CDS
AGCTACTGATAGAGTTTGCC+CGG 0.490850 1_4:+54124204 Msa0170200:CDS
CTTCTTTCAAGTTATCTACA+AGG 0.490910 1_4:-54128823 None:intergenic
TGCTTTCCAAGTACTGATCA+TGG 0.491140 1_4:-54117765 None:intergenic
ATGAGCACGGGATTCCACTT+TGG 0.491601 1_4:-54127065 None:intergenic
CTTTCAACTTGGACTACAGC+AGG 0.493781 1_4:-54119865 None:intergenic
CCCAACTGCTGTTGAGGCTG+GGG 0.493988 1_4:+54127244 Msa0170200:CDS
CTCAACGAATCTAACATCAT+AGG 0.495228 1_4:-54128982 None:intergenic
TGTGTTGGCAAGCTGCTGTC+TGG 0.498264 1_4:+54116636 Msa0170200:CDS
GGGTCGAAATTACTTGATAG+AGG 0.499518 1_4:+54111179 None:intergenic
ACAGTCAGCTTAACGCCTAA+AGG 0.499628 1_4:+54126512 Msa0170200:CDS
TCTGTTAAGGAATGGTATAT+GGG 0.499920 1_4:+54112136 Msa0170200:intron
TAACAAGAACAGAAACAAGA+TGG 0.500724 1_4:-54126937 None:intergenic
AATGATTCTTTCCTTGCTCA+AGG 0.500806 1_4:+54121542 Msa0170200:CDS
TGAAGAAAGACATAACAAAC+AGG 0.501969 1_4:+54123765 Msa0170200:CDS
CAAATGTCAATTAGCTGGCT+GGG 0.502489 1_4:+54114745 Msa0170200:intron
GAGGCAGTTGTTGTCAAACT+TGG 0.502858 1_4:+54126965 Msa0170200:CDS
ATATTTCTAACAATGGCGGC+AGG 0.504743 1_4:-54127220 None:intergenic
TCCTATTCTGAAGGCTGAGT+GGG 0.506035 1_4:+54118812 Msa0170200:CDS
TGGTCTTCAGCCTGATAAGA+AGG 0.506036 1_4:+54112461 Msa0170200:CDS
TATCTTCAGGAAGCATGGAT+AGG 0.507487 1_4:+54127531 Msa0170200:CDS
AACAGATATCTTGTCTGTCA+AGG 0.508062 1_4:+54128068 Msa0170200:CDS
TCCCACTCAGCCTTCAGAAT+AGG 0.509055 1_4:-54118813 None:intergenic
TACAAAGAGATCCATAGCAC+TGG 0.509387 1_4:-54119891 None:intergenic
TTTGCTGTCCTTGATAGAAA+AGG 0.510636 1_4:+54114373 Msa0170200:CDS
ATCAAACCATTCAAAAGTGA+TGG 0.511914 1_4:-54113757 None:intergenic
TCATCTATTGTGGCATTCCA+TGG 0.512846 1_4:+54127326 Msa0170200:CDS
CCCCAGCCTCAACAGCAGTT+GGG 0.512947 1_4:-54127244 None:intergenic
ATCAAACAACTCCTTGAAAG+TGG 0.513706 1_4:+54126649 Msa0170200:CDS
AAACAAGGCATTTGTTTCAG+AGG 0.513764 1_4:+54115240 Msa0170200:CDS
CTAGTGCCAGATAAATCATC+AGG 0.514392 1_4:+54119096 Msa0170200:CDS
CTTGTGCTGATAAAACCAAA+AGG 0.516170 1_4:+54118613 Msa0170200:CDS
CATCCTCGTTGAACTGCTTG+AGG 0.516563 1_4:+54128877 Msa0170200:CDS
GGCCATATCTTTCTATGGCA+TGG 0.516981 1_4:+54127553 Msa0170200:CDS
TTTCTGTGCCGTAATGCTAA+TGG 0.517009 1_4:+54122363 Msa0170200:CDS
TTCTTATAGGGATTTGCCTG+GGG 0.518384 1_4:+54114159 Msa0170200:intron
AGCACTGGAGACTTTCAACT+TGG 0.518538 1_4:-54119876 None:intergenic
AAGAGAAGCTGCAAGGCAGT+AGG 0.518720 1_4:-54111240 None:intergenic
GGCAACATTTATTGGTACAA+TGG 0.519554 1_4:+54127298 Msa0170200:CDS
AAAGTGGAATCCCGTGCTCA+TGG 0.520023 1_4:+54127067 Msa0170200:CDS
GTCCTCACTGGGGTCCACAC+CGG 0.522145 1_4:+54120423 Msa0170200:CDS
TTAATTGAAGATAAACATCC+AGG 0.522220 1_4:-54118460 None:intergenic
ATACTTCCATGATCAGTACT+TGG 0.522733 1_4:+54117759 Msa0170200:CDS
AAGGAGTAATGGATAAATCA+TGG 0.523492 1_4:-54117794 None:intergenic
GATCATTCAGATAAAGATGT+TGG 0.523801 1_4:+54126095 Msa0170200:CDS
CTATTGTGGCATTCCATGGA+AGG 0.527726 1_4:+54127330 Msa0170200:CDS
ATGTGGTCATCCAACGAGGC+AGG 0.528235 1_4:-54128508 None:intergenic
TCAAGGACAGCAAAGCCTGC+TGG 0.528595 1_4:-54114364 None:intergenic
ATCTTCAGGAAGCATGGATA+GGG 0.529004 1_4:+54127532 Msa0170200:CDS
TAACTTAACAATACACTCCA+TGG 0.529174 1_4:-54120193 None:intergenic
TAAATCATCAGGCAATCTAC+TGG 0.529570 1_4:+54119107 Msa0170200:CDS
AACTGTATCTTCAGGAAGCA+TGG 0.529959 1_4:+54127526 Msa0170200:CDS
ACAGTTTCGGAAAGACTTGA+CGG 0.531853 1_4:-54123971 None:intergenic
TCAGTAACAAAACATCAAGA+AGG 0.531872 1_4:-54123745 None:intergenic
TCTAGAGCCACCTGCCTCGT+TGG 0.532500 1_4:+54128498 Msa0170200:CDS
ATTACTCCTTGCTATGCCAC+AGG 0.533955 1_4:+54117807 Msa0170200:CDS
TCTTGCACAGGAAATTCTGC+AGG 0.535392 1_4:+54128922 Msa0170200:CDS
GGGTGCAACACTACCTAGAA+TGG 0.535731 1_4:+54112184 Msa0170200:CDS
ATAATTCCTAAACCTTTCAT+CGG 0.535764 1_4:-54111678 None:intergenic
AAATTCTTTGCAGTCTGTAA+GGG 0.537394 1_4:+54120164 Msa0170200:intron
CAATCGCAGACATCGATACC+TGG 0.537531 1_4:+54118442 Msa0170200:intron
GGAAGAACTTCTAATTGCGT+TGG 0.537618 1_4:+54120345 Msa0170200:CDS
CTTAATAGTCAATTCTACAC+GGG 0.538323 1_4:+54121986 Msa0170200:CDS
TGGCATACAAAAGCTGATCA+AGG 0.538573 1_4:-54119014 None:intergenic
GTTTGGCTTGTATCATCCAA+AGG 0.541542 1_4:+54115039 Msa0170200:CDS
CTTAAAGGTGTGAAAGACTC+GGG 0.541680 1_4:+54112164 Msa0170200:CDS
CAAGCAGCTTTAAATGTCGA+TGG 0.545621 1_4:+54116552 Msa0170200:CDS
AAAACATCCAAGGCCTTCGT+TGG 0.546236 1_4:-54114027 None:intergenic
ATATCTTGTCTGTCAAGGGC+TGG 0.546502 1_4:+54128073 Msa0170200:CDS
GTTGAAAGTCTCCAGTGCTA+TGG 0.546932 1_4:+54119880 Msa0170200:CDS
GACAACAACATCAGTAGTCC+GGG 0.546932 1_4:-54124222 None:intergenic
ATTATGGCCATTTAAAGGAA+AGG 0.546945 1_4:+54129055 Msa0170200:three_prime_UTR
AATTATACTTCGCGGTTCAG+AGG 0.551394 1_4:-54128622 None:intergenic
TTGCGGGGTCGCATTGAACA+TGG 0.551712 1_4:+54120222 Msa0170200:CDS
TGGACTCCCTAATTATCTGC+AGG 0.551807 1_4:+54114236 Msa0170200:CDS
AAGATAGAAGGACGAGTGAA+CGG 0.552986 1_4:-54111443 None:intergenic
AGAGAAGCTGCAAGGCAGTA+GGG 0.553654 1_4:-54111239 None:intergenic
CATCTGGCGTCTCAATATTG+AGG 0.553929 1_4:-54124974 None:intergenic
CTTTCGTAATCCATGAGCAC+GGG 0.554981 1_4:-54127077 None:intergenic
AGTGGCAGCAGTTTCAGCGT+TGG 0.555141 1_4:+54126667 Msa0170200:CDS
GACCTACTTGTTGTTTGCAT+CGG 0.555245 1_4:+54128559 Msa0170200:CDS
AACAAGAACAGAAACAAGAT+GGG 0.555402 1_4:-54126936 None:intergenic
GACAATTCTAATAAAACCCC+AGG 0.555785 1_4:-54114175 None:intergenic
TGCGGAATCAGTAAGTGCTA+TGG 0.557132 1_4:-54111408 None:intergenic
CTGGGAAATTCTCCAACTAC+GGG 0.557628 1_4:+54121321 Msa0170200:CDS
TGTTTGATGAATCGTCATCA+AGG 0.559889 1_4:-54126634 None:intergenic
TAAGGATGAAGACTGCCAGC+AGG 0.559986 1_4:+54114349 Msa0170200:CDS
TTTCAACCTGTGGCATAGCA+AGG 0.561730 1_4:-54117813 None:intergenic
GAGACATGATTATATCCTCC+AGG 0.561844 1_4:-54124024 None:intergenic
GCAGAGAAAATATATGGTTG+CGG 0.561950 1_4:-54124247 None:intergenic
TGTGGCATAGCAAGGAGTAA+TGG 0.562119 1_4:-54117805 None:intergenic
GAACAACAATATAAGTAATG+AGG 0.562235 1_4:-54124919 None:intergenic
GAAGTTACCTTGAGCAGCGA+TGG 0.562297 1_4:-54111513 None:intergenic
GCCAATGGAACAAGAAGAGA+AGG 0.564011 1_4:-54119958 None:intergenic
ACCATGAAGATAATATCGAT+TGG 0.565898 1_4:+54118524 Msa0170200:CDS
TACAGAGCGCGGTTGAAAAG+AGG 0.566020 1_4:-54111264 None:intergenic
ACTGTCTCAATATGGCCTCT+GGG 0.566125 1_4:-54116503 None:intergenic
TCAAGCAGTTCAACGAGGAT+GGG 0.566456 1_4:-54128875 None:intergenic
TTCTGATTAGCACCGATGAA+AGG 0.567079 1_4:+54111666 Msa0170200:CDS
AATATACCCAACTGCTGTTG+AGG 0.567549 1_4:+54127238 Msa0170200:CDS
AAGTGTGTTTCCTATTCTGA+AGG 0.567559 1_4:+54118803 Msa0170200:CDS
ATGGGGTGCATTTGAGGCTG+GGG 0.567866 1_4:-54126918 None:intergenic
CTAATATTGCAGAGTCAACT+CGG 0.568126 1_4:+54125897 Msa0170200:intron
CAGCAATGTCTTCGTGATTG+TGG 0.568575 1_4:+54112215 Msa0170200:CDS
TCTTAAAGGTGTGAAAGACT+CGG 0.569391 1_4:+54112163 Msa0170200:CDS
AGCTTGTAATTGAGAAGCCA+AGG 0.570228 1_4:-54111378 None:intergenic
TAGTTTCTTTAAAACATCCA+AGG 0.571442 1_4:-54114037 None:intergenic
CGGGATTGCTCGTGCTTGTG+AGG 0.575385 1_4:+54113792 Msa0170200:CDS
ACCTGATCATCACCGGCCAA+TGG 0.576742 1_4:-54119973 None:intergenic
ATAAGCTTGCTGAGAACCAT+CGG 0.577111 1_4:+54127579 Msa0170200:CDS
GACTCGTACCTGATCATCAC+CGG 0.577862 1_4:-54119980 None:intergenic
TCATCAAATTCCGTCACGCT+AGG 0.579162 1_4:-54128538 None:intergenic
ACAGATATCTTGTCTGTCAA+GGG 0.582471 1_4:+54128069 Msa0170200:CDS
GACACACTTTCCCTTGAGGA+AGG 0.584709 1_4:+54123935 Msa0170200:CDS
TGTGTTCATCATCTTGGCGA+TGG 0.584716 1_4:+54127970 Msa0170200:CDS
TCATAAAAGGAAACTAAAGA+AGG 0.584814 1_4:-54125077 None:intergenic
TAAATTTCTCTGTCATTGTG+AGG 0.584896 1_4:+54125979 Msa0170200:CDS
ACTCACATTTATGCGCATCA+AGG 0.585262 1_4:-54122412 None:intergenic
CTCAGGAATAGATGCCAAAG+TGG 0.587107 1_4:+54127051 Msa0170200:CDS
ATTTACACCATCGCTGCTCA+AGG 0.587470 1_4:+54111506 Msa0170200:CDS
TCGAGCGTTTGAAGTGCAGC+CGG 0.587577 1_4:-54111827 None:intergenic
TCATCGCAAAATTCTAGCAA+TGG 0.587825 1_4:+54111349 Msa0170200:exon
GTTGGGTATATTTCTAACAA+TGG 0.588872 1_4:-54127227 None:intergenic
ATGATTCTTTCCTTGCTCAA+GGG 0.589553 1_4:+54121543 Msa0170200:CDS
AGAGTAAAGAATTGGATAGA+GGG 0.592118 1_4:+54111723 Msa0170200:CDS
AATCATGTCTCATGATAGCA+TGG 0.592596 1_4:+54124036 Msa0170200:CDS
TCAACGCAGCGGAAGTTCGA+AGG 0.593614 1_4:-54126799 None:intergenic
GGATTCAGTACTCTTATCAG+CGG 0.596784 1_4:-54111483 None:intergenic
AGGAAATAGAGTCTTTGAGT+GGG 0.597321 1_4:+54128942 Msa0170200:CDS
GATCAAGATCAAGTTCTCGT+TGG 0.598397 1_4:+54126549 Msa0170200:CDS
TTGCATCTACAAGATGCAAG+AGG 0.600709 1_4:-54125944 None:intergenic
ATCCTTAGAGGACTTTATCA+CGG 0.603588 1_4:-54126870 None:intergenic
GTTAAGTTACACGCTTTGCG+GGG 0.603818 1_4:+54120207 Msa0170200:CDS
ACTGCTGCACGGAGTTCAGA+AGG 0.604583 1_4:-54114803 None:intergenic
TTCAAGGCATGCAACGAAGG+TGG 0.605103 1_4:-54126723 None:intergenic
TAGTACAGATACTTAACATA+CGG 0.606001 1_4:+54112037 Msa0170200:CDS
ATGGCCATTTAAAGGAAAGG+TGG 0.608982 1_4:+54129058 Msa0170200:three_prime_UTR
ATATTATGATAGGACGAGCC+CGG 0.609745 1_4:-54120442 None:intergenic
AGATTCAAGGCATGCAACGA+AGG 0.610484 1_4:-54126726 None:intergenic
AAACTATGCGCGCTGTTGTG+AGG 0.612613 1_4:+54126015 Msa0170200:CDS
TTCCTATTCTGAAGGCTGAG+TGG 0.614009 1_4:+54118811 Msa0170200:CDS
TGGAGAATCAGCTGTCACAC+AGG 0.614162 1_4:+54124337 Msa0170200:CDS
TGGGAATCTTCAGTGAATGC+TGG 0.615272 1_4:+54118831 Msa0170200:CDS
GCTTTCGTAATCCATGAGCA+CGG 0.616224 1_4:-54127078 None:intergenic
CAGGAAATAGAGTCTTTGAG+TGG 0.616721 1_4:+54128941 Msa0170200:CDS
AAATGACTCTGTTCATCATG+TGG 0.618126 1_4:+54114403 Msa0170200:CDS
GATTGCTCGTGCTTGTGAGG+AGG 0.618365 1_4:+54113795 Msa0170200:CDS
TGTGTAATGTCTTCTTCAGG+TGG 0.619002 1_4:+54121777 Msa0170200:CDS
TTCAAACTAGAATCAGGAGA+AGG 0.620739 1_4:+54125197 Msa0170200:CDS
TCGAAGGCAACTAGAAGTCA+CGG 0.621010 1_4:-54126783 None:intergenic
AAATGACACACTTTCCCTTG+AGG 0.622064 1_4:+54123931 Msa0170200:CDS
CTCATACTTGCACCAAAGTG+TGG 0.624114 1_4:+54123617 Msa0170200:CDS
GAAGGATCTTTCAGATCACA+AGG 0.624368 1_4:+54112479 Msa0170200:CDS
CAGTAACAAAACATCAAGAA+GGG 0.625838 1_4:-54123744 None:intergenic
CTATCCAATTCTTTACTCTG+GGG 0.626014 1_4:-54111719 None:intergenic
AATGCATGTGTGTCGTGGTA+CGG 0.626211 1_4:-54112006 None:intergenic
AATGGACAGATCATCTATTG+TGG 0.627181 1_4:+54127316 Msa0170200:CDS
GAAATTCTCCAACTACGGGA+AGG 0.628693 1_4:+54121325 Msa0170200:CDS
GATACATGAGCACAATGTTG+AGG 0.631551 1_4:+54111963 Msa0170200:CDS
ATGCCCAATTCCCTTGAGCA+AGG 0.631993 1_4:-54121553 None:intergenic
ACAACTCCAGAAACATTGAC+TGG 0.633006 1_4:-54125124 None:intergenic
TGTTTGCATCGGTCAAATGG+CGG 0.634876 1_4:+54128570 Msa0170200:CDS
AACATCATAGGTAGTCTCGA+AGG 0.636589 1_4:-54128970 None:intergenic
GTTCATCATCTTGGCGATGG+CGG 0.638833 1_4:+54127973 Msa0170200:CDS
TGTACAAATTGCAACTAGAG+AGG 0.639841 1_4:+54122389 Msa0170200:CDS
CTCAATATTGAGGAAACAGG+TGG 0.640604 1_4:-54124964 None:intergenic
TGTTGACACACTTCCAACGA+AGG 0.640723 1_4:+54114014 Msa0170200:CDS
ATGCTCTTGAAGTATATCGA+AGG 0.640746 1_4:-54126059 None:intergenic
TTGGGATGATCCTTCCTCAA+GGG 0.641835 1_4:-54123945 None:intergenic
AGATTCTTCTAAGCTTCTCG+AGG 0.641925 1_4:+54116590 Msa0170200:CDS
AACAGTATACAAGTATGACT+TGG 0.642247 1_4:+54125051 Msa0170200:CDS
GACTCTATTGATTATCCTGG+AGG 0.642367 1_4:+54124009 Msa0170200:CDS
TATTTCTAACAATGGCGGCA+GGG 0.643298 1_4:-54127219 None:intergenic
GCTGTCTAAGACAGATGATG+TGG 0.643610 1_4:+54124600 Msa0170200:CDS
TGGATTACGAAAGCTTCTTG+CGG 0.644128 1_4:+54127087 Msa0170200:CDS
CATGAATATACCTAGCGTGA+CGG 0.645722 1_4:+54128528 Msa0170200:CDS
TTAACGCCTAAAGGCAACAA+AGG 0.645984 1_4:+54126521 Msa0170200:CDS
GCTTAATAGTCAATTCTACA+CGG 0.647249 1_4:+54121985 Msa0170200:CDS
TGGTCATCCAACGAGGCAGG+TGG 0.648131 1_4:-54128505 None:intergenic
ATGATAGGACGAGCCCGGTG+TGG 0.649195 1_4:-54120437 None:intergenic
GGGTATATTTCTAACAATGG+CGG 0.649343 1_4:-54127224 None:intergenic
GTTGGGATGATCCTTCCTCA+AGG 0.651749 1_4:-54123946 None:intergenic
AAACGAAGAAGAAGAACACG+AGG 0.654037 1_4:+54111290 Msa0170200:five_prime_UTR
GGCACAGAAACACAAGTGCA+AGG 0.655067 1_4:-54122350 None:intergenic
TCACGCTAGGTATATTCATG+TGG 0.655802 1_4:-54128525 None:intergenic
ACGAAGGTGGAACTATTCGA+AGG 0.655938 1_4:-54126710 None:intergenic
AATGTGCTAAGAAGATGTGT+TGG 0.656297 1_4:+54116621 Msa0170200:CDS
AAGAGGAAAGAGAAGCTGCA+AGG 0.657357 1_4:-54111247 None:intergenic
TGCAAGGCTCTACATAAGCA+GGG 0.661597 1_4:-54121946 None:intergenic
CAAGTATGAGGTCAAGTATG+CGG 0.662111 1_4:-54123604 None:intergenic
TGTTGTGAGGAATATAACAA+TGG 0.663001 1_4:+54126028 Msa0170200:CDS
TGAAGACCAGAATTCACGAA+AGG 0.666347 1_4:-54112447 None:intergenic
TCTGTCTTAGACAGCCAACA+AGG 0.666621 1_4:-54124592 None:intergenic
GGGGTTGCAGGATAAAGCAA+AGG 0.670963 1_4:+54122006 Msa0170200:CDS
AATCGATATTATCTTCATGG+TGG 0.671175 1_4:-54118522 None:intergenic
TGAAGTGTTAGACTTAAACT+CGG 0.673175 1_4:+54118978 Msa0170200:CDS
GACCGATGCAAACAACAAGT+AGG 0.679966 1_4:-54128561 None:intergenic
GCCCGGTGTGGACCCCAGTG+AGG 0.687104 1_4:-54120425 None:intergenic
TTAATAGTCAATTCTACACG+GGG 0.687408 1_4:+54121987 Msa0170200:CDS
GGAAATAGAGTCTTTGAGTG+GGG 0.687994 1_4:+54128943 Msa0170200:CDS
GATGAACAGAGTCATTTATG+GGG 0.694679 1_4:-54114397 None:intergenic
GAACAAATGCATGTGTGTCG+TGG 0.697055 1_4:-54112011 None:intergenic
GAAAATGATGAACTGCTGCA+CGG 0.698379 1_4:-54114814 None:intergenic
GAGCGATACTATAATAAACA+CGG 0.699526 1_4:+54121609 Msa0170200:CDS
TGATGTGGAGAAATTACTGA+AGG 0.704064 1_4:+54124615 Msa0170200:CDS
ACTGTGCTGCTAAGAAATGG+AGG 0.705738 1_4:-54119503 None:intergenic
ATTCATGTGGTCATCCAACG+AGG 0.731331 1_4:-54128512 None:intergenic
CGTTGTTCACGTCCTCACTG+GGG 0.736218 1_4:+54120413 Msa0170200:CDS
ACAAGAACAGAAACAAGATG+GGG 0.736831 1_4:-54126935 None:intergenic
CATCCTCAAGCAGTTCAACG+AGG 0.737282 1_4:-54128880 None:intergenic
AAGAACTTTGATCAACGCAG+CGG 0.745827 1_4:-54126810 None:intergenic
GGGTCTTATTGACATCCCAG+AGG 0.763322 1_4:+54116488 Msa0170200:intron
GTTTCGGAAAGACTTGACGG+CGG 0.791918 1_4:-54123968 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATTATATAATATATTTG+GGG + chr1_4:54112513-54112532 Msa0170200:intron 10.0%
!! AATTAATACTAATATGTAAA+TGG - chr1_4:54112635-54112654 None:intergenic 10.0%
!! ATATACATATTAAAAACAAA+TGG - chr1_4:54114119-54114138 None:intergenic 10.0%
!! GAAAAAATATAATCAAAAAT+AGG - chr1_4:54115475-54115494 None:intergenic 10.0%
!! GAAAAAATATAATCAAAAAT+AGG - chr1_4:54115475-54115494 None:intergenic 10.0%
!!! TTCAATTTTTATAATTACTT+TGG + chr1_4:54117574-54117593 Msa0170200:intron 10.0%
!!! TCAATTTTTATAATTACTTT+GGG + chr1_4:54117575-54117594 Msa0170200:intron 10.0%
!!! AATTATACTTTTTTCATTTT+TGG + chr1_4:54120824-54120843 Msa0170200:intron 10.0%
!!! TCATTTTAAAAATTAATAGT+TGG - chr1_4:54123369-54123388 None:intergenic 10.0%
!!! TTTCTTTTTATTTTTTTTCT+TGG + chr1_4:54125716-54125735 Msa0170200:intron 10.0%
!! TAAATAAATTATCATAGATT+TGG - chr1_4:54126153-54126172 None:intergenic 10.0%
!!! TATTTTTTAAATCTTTAGTT+AGG - chr1_4:54126997-54127016 None:intergenic 10.0%
!! TAAAGATTTAAAAAATATCA+TGG + chr1_4:54127000-54127019 Msa0170200:CDS 10.0%
!!! TTATTAATATGACATTTTTT+TGG + chr1_4:54127870-54127889 Msa0170200:intron 10.0%
!!! CACTATTTATTTTAAAAATA+TGG + chr1_4:54128206-54128225 Msa0170200:intron 10.0%
!! AGTTAACAATAAATAATTGA+AGG - chr1_4:54112925-54112944 None:intergenic 15.0%
!! ATAGAATAATAAGTTTAAAG+TGG - chr1_4:54113276-54113295 None:intergenic 15.0%
!!! CTTTTTAAACTATAAATTTG+AGG - chr1_4:54113505-54113524 None:intergenic 15.0%
!!! AATTTTTTCTGTTTGATTAA+TGG + chr1_4:54113898-54113917 Msa0170200:intron 15.0%
!! AAATTTAAAAAGATTGGAAA+TGG + chr1_4:54114534-54114553 Msa0170200:intron 15.0%
!!! TGATTATATTTTTTCCTAAA+AGG + chr1_4:54115480-54115499 Msa0170200:intron 15.0%
!!! TTTTTTTTTTACTGTCAAAA+TGG + chr1_4:54115921-54115940 Msa0170200:intron 15.0%
!! TTGATAAATAAAAATTTCAG+AGG - chr1_4:54117458-54117477 None:intergenic 15.0%
!! TAATCAATATATGACAAATT+TGG - chr1_4:54118120-54118139 None:intergenic 15.0%
!!! GTTCTATAATTAACATTTTA+TGG + chr1_4:54119783-54119802 Msa0170200:intron 15.0%
!! AAAAAATAATTAGGCATAAA+GGG - chr1_4:54120280-54120299 None:intergenic 15.0%
!! TAAAAAATAATTAGGCATAA+AGG - chr1_4:54120281-54120300 None:intergenic 15.0%
!! TATGAAGGTAAAAAATAATT+AGG - chr1_4:54120289-54120308 None:intergenic 15.0%
!!! TCAATATTTTACACATTATA+AGG - chr1_4:54120652-54120671 None:intergenic 15.0%
!!! TAAATTTGCATTGATTAATA+TGG - chr1_4:54120776-54120795 None:intergenic 15.0%
!! GCAAAAAAAAAAAAAAAAAG+TGG - chr1_4:54120851-54120870 None:intergenic 15.0%
!!! GATACATACTATTTTATTTT+TGG - chr1_4:54120962-54120981 None:intergenic 15.0%
!!! TGTTAATATGATTTTAATTG+TGG + chr1_4:54121381-54121400 Msa0170200:intron 15.0%
!! TTACTTTGTTCAATTATATT+GGG + chr1_4:54125287-54125306 Msa0170200:intron 15.0%
!!! CTTAAACATTATTTTATTAC+AGG + chr1_4:54127187-54127206 Msa0170200:intron 15.0%
!! ATATATTGAAAATTTAGACA+TGG + chr1_4:54127837-54127856 Msa0170200:intron 15.0%
!! TATATTGAAAATTTAGACAT+GGG + chr1_4:54127838-54127857 Msa0170200:intron 15.0%
!!! GAAATTTGAATTTGAGTTTT+TGG + chr1_4:54111623-54111642 Msa0170200:intron 20.0%
!!! TGATTTGATTTGTTTTTGTA+TGG + chr1_4:54111888-54111907 Msa0170200:intron 20.0%
!! CAATTAATTTCATGATTCTA+CGG + chr1_4:54112755-54112774 Msa0170200:intron 20.0%
!! ATTATTCTATATCTATCATC+TGG + chr1_4:54113286-54113305 Msa0170200:intron 20.0%
!! TTAAATACATGTTCAGTTAT+AGG + chr1_4:54113405-54113424 Msa0170200:intron 20.0%
!! TAAATACATGTTCAGTTATA+GGG + chr1_4:54113406-54113425 Msa0170200:intron 20.0%
!! TATAGCCAAGTTAAAAAAAT+AGG - chr1_4:54113956-54113975 None:intergenic 20.0%
!!! TTATGAATCCTTTTTCTTAT+AGG + chr1_4:54114146-54114165 Msa0170200:intron 20.0%
!!! TATGAATCCTTTTTCTTATA+GGG + chr1_4:54114147-54114166 Msa0170200:intron 20.0%
!!! TAATTCTATGATTTTCTTTC+TGG + chr1_4:54114262-54114281 Msa0170200:intron 20.0%
!! TGAGAGAAATTTAAAAAGAT+TGG + chr1_4:54114528-54114547 Msa0170200:intron 20.0%
!!! TAAGATTTTATGTAAGATGT+TGG + chr1_4:54114970-54114989 Msa0170200:CDS 20.0%
!!! ATTCTTATTTGATATGTTGT+AGG + chr1_4:54115165-54115184 Msa0170200:intron 20.0%
!!! TTTTTTTTTGTTGCTAAATG+CGG + chr1_4:54115380-54115399 Msa0170200:intron 20.0%
!!! TTTTTTTTTTACTGTCAAAC+TGG + chr1_4:54115516-54115535 Msa0170200:intron 20.0%
!!! TTTTTCAAAACTTTGAACAA+AGG - chr1_4:54115737-54115756 None:intergenic 20.0%
!! TTTACAATAATCTCTAATCA+TGG + chr1_4:54115834-54115853 Msa0170200:intron 20.0%
!! TTACAATAATCTCTAATCAT+GGG + chr1_4:54115835-54115854 Msa0170200:intron 20.0%
!!! TGATTATATTTTTTCCGAAA+AGG + chr1_4:54115888-54115907 Msa0170200:intron 20.0%
!!! TTTTTCAAAACTTTGAACAA+AGG - chr1_4:54115737-54115756 None:intergenic 20.0%
!! AAAAACACAAATCACAATAT+TGG - chr1_4:54116224-54116243 None:intergenic 20.0%
!! ATGTAACATTTAAACAAAAG+AGG - chr1_4:54116704-54116723 None:intergenic 20.0%
!! AAATACAATATATGGGTTTA+AGG - chr1_4:54117078-54117097 None:intergenic 20.0%
!! AAATACAATATATGGGTTTA+AGG - chr1_4:54117078-54117097 None:intergenic 20.0%
!!! TTAACTGTAAAATCTAAGAT+GGG - chr1_4:54117271-54117290 None:intergenic 20.0%
!! ATTAACTGTAAAATCTAAGA+TGG - chr1_4:54117272-54117291 None:intergenic 20.0%
!! TAATAGTCAAAGAAATTAAC+TGG + chr1_4:54117973-54117992 Msa0170200:CDS 20.0%
!! AAAAACAAAACTTCAAAAAC+TGG + chr1_4:54118254-54118273 Msa0170200:intron 20.0%
!!! TTTATCTTCAATTAACTTGA+AGG + chr1_4:54118468-54118487 Msa0170200:CDS 20.0%
!! TGTACTATTTGAGAAAAAAT+GGG - chr1_4:54118663-54118682 None:intergenic 20.0%
!! ATGTACTATTTGAGAAAAAA+TGG - chr1_4:54118664-54118683 None:intergenic 20.0%
!!! GGTCATATTTGTTTTAAAAA+CGG + chr1_4:54118710-54118729 Msa0170200:intron 20.0%
!!! GTCATATTTGTTTTAAAAAC+GGG + chr1_4:54118711-54118730 Msa0170200:intron 20.0%
!!! TCATATTTGTTTTAAAAACG+GGG + chr1_4:54118712-54118731 Msa0170200:intron 20.0%
!!! ATAACCTTTTTTGTTTGTTT+TGG + chr1_4:54118935-54118954 Msa0170200:intron 20.0%
!! AATTCCAAAACAAACAAAAA+AGG - chr1_4:54118942-54118961 None:intergenic 20.0%
!! AATTGAATTCCAAACAAATA+CGG - chr1_4:54119146-54119165 None:intergenic 20.0%
!! AAAAAACTTAGATAATAGGT+GGG - chr1_4:54119538-54119557 None:intergenic 20.0%
!! TAAAAAACTTAGATAATAGG+TGG - chr1_4:54119539-54119558 None:intergenic 20.0%
!! CTGTAAAAAACTTAGATAAT+AGG - chr1_4:54119542-54119561 None:intergenic 20.0%
!!! AACAAATTCGCTATTATTTT+AGG - chr1_4:54121084-54121103 None:intergenic 20.0%
!!! TAGTTTTGAACATAATTTTC+AGG + chr1_4:54121255-54121274 Msa0170200:intron 20.0%
!! TTAAATCTGGAAATTAAATC+TGG - chr1_4:54121441-54121460 None:intergenic 20.0%
!! AAGATACTTTCTTACAATAT+TGG - chr1_4:54121493-54121512 None:intergenic 20.0%
!! CAAGAAAAAATCAATAGTTT+AGG - chr1_4:54122175-54122194 None:intergenic 20.0%
!! CAAGAAAAAATCAATAGTTT+AGG - chr1_4:54122175-54122194 None:intergenic 20.0%
!!! AAACATTGAGATAATTTTGT+GGG - chr1_4:54122600-54122619 None:intergenic 20.0%
!!! AAAACATTGAGATAATTTTG+TGG - chr1_4:54122601-54122620 None:intergenic 20.0%
!!! TATCTCAATGTTTTTCTAAA+TGG + chr1_4:54122607-54122626 Msa0170200:intron 20.0%
!! TTTAGAAACTATTTCAAAGT+AGG + chr1_4:54122796-54122815 Msa0170200:intron 20.0%
!! TTAGAAACTATTTCAAAGTA+GGG + chr1_4:54122797-54122816 Msa0170200:intron 20.0%
!!! AGAATCAATTTTAGTCTTTA+TGG + chr1_4:54122891-54122910 Msa0170200:intron 20.0%
!!! GATTATGTTAGTTTTCATTT+TGG + chr1_4:54123266-54123285 Msa0170200:intron 20.0%
!! AAATATAATACCAGAAAAAC+AGG - chr1_4:54123298-54123317 None:intergenic 20.0%
!! TTTAAAAATTAATAGTTGGC+AGG - chr1_4:54123365-54123384 None:intergenic 20.0%
!!! TTTCTTTTGAAAATCTATCT+TGG + chr1_4:54123406-54123425 Msa0170200:intron 20.0%
!!! TTCTTTTGAAAATCTATCTT+GGG + chr1_4:54123407-54123426 Msa0170200:intron 20.0%
!! AAGAATGAACTGATAATAAT+TGG + chr1_4:54123495-54123514 Msa0170200:intron 20.0%
!! TTGAATATGATTTACAGTTT+CGG - chr1_4:54123987-54124006 None:intergenic 20.0%
!!! ATATTTTTTTTTCTTCCTTC+AGG + chr1_4:54124718-54124737 Msa0170200:intron 20.0%
!! GAACAAAGTAAGAAATTAAA+AGG - chr1_4:54125278-54125297 None:intergenic 20.0%
!! CTTACTTTGTTCAATTATAT+TGG + chr1_4:54125286-54125305 Msa0170200:intron 20.0%
!!! TGAACCAAAAATATGAATTT+TGG + chr1_4:54125572-54125591 Msa0170200:intron 20.0%
!!! TAAGCCAAAATTCATATTTT+TGG - chr1_4:54125579-54125598 None:intergenic 20.0%
!!! GAATAAGATTATGAATCTTT+TGG - chr1_4:54125859-54125878 None:intergenic 20.0%
!! TTATTCAAAATGTATGTGAT+GGG + chr1_4:54125873-54125892 Msa0170200:intron 20.0%
!! AAAATGCAATATATGTCTAA+GGG - chr1_4:54126265-54126284 None:intergenic 20.0%
!! ATCTTCTAATAATAGATTCA+AGG - chr1_4:54126742-54126761 None:intergenic 20.0%
!!! ACATTATTTTATTACAGGTA+CGG + chr1_4:54127192-54127211 Msa0170200:intron 20.0%
!! ACAAGGAATATAAAAACATT+AGG - chr1_4:54127615-54127634 None:intergenic 20.0%
!! TCAAATAACATTATCTAACA+AGG - chr1_4:54127632-54127651 None:intergenic 20.0%
!!! GTATTTTGTTTTTCATTCTT+AGG + chr1_4:54127732-54127751 Msa0170200:intron 20.0%
!!! TTTTAAAATAAATAGTGCAG+TGG - chr1_4:54128203-54128222 None:intergenic 20.0%
!! AAACAACATGAAACAAATAT+TGG - chr1_4:54128251-54128270 None:intergenic 20.0%
!! ACATATAAAGTAACTTTAGA+TGG - chr1_4:54128331-54128350 None:intergenic 20.0%
!! AACCTACAAAAGAAAATTTA+AGG - chr1_4:54128738-54128757 None:intergenic 20.0%
!! ATCTCTAATTCCATTTAAAA+AGG - chr1_4:54129187-54129206 None:intergenic 20.0%
! ATAATTCCTAAACCTTTCAT+CGG - chr1_4:54111681-54111700 None:intergenic 25.0%
!!! TTCTGGATATTTTAATCTTC+CGG + chr1_4:54111808-54111827 Msa0170200:CDS 25.0%
!! TGATTATGTTTTGTGGTTTT+TGG + chr1_4:54111911-54111930 Msa0170200:intron 25.0%
!!! TTTGATTTGTTATGTGTTTC+AGG + chr1_4:54111941-54111960 Msa0170200:intron 25.0%
! TAGTACAGATACTTAACATA+CGG + chr1_4:54112037-54112056 Msa0170200:CDS 25.0%
!!! TGATTGTTTGTTACTTTCTT+TGG + chr1_4:54112071-54112090 Msa0170200:intron 25.0%
! ATGGTTTCTGATGTATTTAT+TGG + chr1_4:54112111-54112130 Msa0170200:intron 25.0%
!!! GTATTTATTGGTTTCTGTTA+AGG + chr1_4:54112123-54112142 Msa0170200:intron 25.0%
! ATCTTAAACATCTAAACACA+CGG - chr1_4:54112283-54112302 None:intergenic 25.0%
!!! ATCACTATGTTTTTTGTTAC+AGG + chr1_4:54112317-54112336 Msa0170200:intron 25.0%
!!! TACATTCTTTGAAGGATTTT+TGG - chr1_4:54112352-54112371 None:intergenic 25.0%
! AATCCTTCAAAGAATGTAAT+TGG + chr1_4:54112354-54112373 Msa0170200:CDS 25.0%
!! AATATATTTGGGGTATCATT+TGG + chr1_4:54112523-54112542 Msa0170200:intron 25.0%
!!! CTTTTGTTTATTTGGTTACT+CGG + chr1_4:54112562-54112581 Msa0170200:intron 25.0%
!!! TTTTGTTTATTTGGTTACTC+GGG + chr1_4:54112563-54112582 Msa0170200:intron 25.0%
! AAAGGCAAATTCATTTCATA+TGG - chr1_4:54112593-54112612 None:intergenic 25.0%
! ACTTCTTAAAAGAAAGGTTT+AGG - chr1_4:54112676-54112695 None:intergenic 25.0%
! AATAGCACTTCTTAAAAGAA+AGG - chr1_4:54112682-54112701 None:intergenic 25.0%
!!! TTTTTTAAGTTATCAAACCC+CGG + chr1_4:54112790-54112809 Msa0170200:intron 25.0%
!!! ACATCTTTTTTTTTTTGTGG+TGG - chr1_4:54113079-54113098 None:intergenic 25.0%
!!! GTGACATCTTTTTTTTTTTG+TGG - chr1_4:54113082-54113101 None:intergenic 25.0%
! TCAATTTCAAATATGGAGAA+TGG - chr1_4:54113104-54113123 None:intergenic 25.0%
!! ATTCTCCATATTTGAAATTG+AGG + chr1_4:54113103-54113122 Msa0170200:intron 25.0%
! GTATTCTTCATTATTCATTC+AGG + chr1_4:54113537-54113556 Msa0170200:intron 25.0%
! AAGATTGATTAAGGCAATAA+GGG - chr1_4:54113848-54113867 None:intergenic 25.0%
!!! TCATGCCTATTTTTTTAACT+TGG + chr1_4:54113948-54113967 Msa0170200:intron 25.0%
!!! TAGTTTCTTTAAAACATCCA+AGG - chr1_4:54114040-54114059 None:intergenic 25.0%
!!! TGGATGTTTTAAAGAAACTA+AGG + chr1_4:54114040-54114059 Msa0170200:CDS 25.0%
!!! GGTTTTATTAGAATTGTCTA+AGG + chr1_4:54114180-54114199 Msa0170200:CDS 25.0%
! ATTGCATTAACTATATGGTT+TGG - chr1_4:54114660-54114679 None:intergenic 25.0%
! CAACTATTGCATTAACTATA+TGG - chr1_4:54114665-54114684 None:intergenic 25.0%
! GAATGAAAAAAAAAGTTGTG+AGG - chr1_4:54114726-54114745 None:intergenic 25.0%
!! ATTTTATGTAAGATGTTGGA+TGG + chr1_4:54114974-54114993 Msa0170200:CDS 25.0%
! TACGTACTAACAGAAAATAA+AGG - chr1_4:54115137-54115156 None:intergenic 25.0%
! ACTGCTTGATATAAATTCTT+CGG + chr1_4:54115207-54115226 Msa0170200:CDS 25.0%
!! TTGTAAAGTATCTTCAACAT+AGG - chr1_4:54115413-54115432 None:intergenic 25.0%
! TTTACAATAATCTCTGATCA+TGG + chr1_4:54115426-54115445 Msa0170200:intron 25.0%
! TTACAATAATCTCTGATCAT+GGG + chr1_4:54115427-54115446 Msa0170200:intron 25.0%
! TCAGTTCAAATCATTTGAAA+TGG - chr1_4:54115576-54115595 None:intergenic 25.0%
!! TTTTGATAGAAGACTTGATT+TGG + chr1_4:54115682-54115701 Msa0170200:intron 25.0%
!! TAAAGTATCTTCAACAATGT+TGG - chr1_4:54115818-54115837 None:intergenic 25.0%
! TACAATAATCTCTAATCATG+GGG + chr1_4:54115836-54115855 Msa0170200:intron 25.0%
! TCAGTTCAAATCATTTGAAA+TGG - chr1_4:54115576-54115595 None:intergenic 25.0%
! TTAAAACATGGAATAGGAAT+CGG - chr1_4:54116418-54116437 None:intergenic 25.0%
!!! GGGAATATGTTTATTTTTCT+CGG + chr1_4:54116862-54116881 Msa0170200:intron 25.0%
!!! TTCCTGTTATTTTTGATGAA+TGG + chr1_4:54116999-54117018 Msa0170200:intron 25.0%
! CTCAGCAAAATACAATATAT+GGG - chr1_4:54117085-54117104 None:intergenic 25.0%
! TCTCAGCAAAATACAATATA+TGG - chr1_4:54117086-54117105 None:intergenic 25.0%
!! ATTCACGATAAATCTAAGAT+GGG - chr1_4:54117160-54117179 None:intergenic 25.0%
! TATTCACGATAAATCTAAGA+TGG - chr1_4:54117161-54117180 None:intergenic 25.0%
! CTCAGCAAAATACAATATAT+GGG - chr1_4:54117085-54117104 None:intergenic 25.0%
! TCTCAGCAAAATACAATATA+TGG - chr1_4:54117086-54117105 None:intergenic 25.0%
! TTACAGTTAATTACAAAGAG+AGG + chr1_4:54117281-54117300 Msa0170200:intron 25.0%
!! TTTTTCTTCCATTCTAATGA+AGG - chr1_4:54117312-54117331 None:intergenic 25.0%
! ATTGTTTAGTAACTTCCTTT+GGG - chr1_4:54117496-54117515 None:intergenic 25.0%
! AATTGTTTAGTAACTTCCTT+TGG - chr1_4:54117497-54117516 None:intergenic 25.0%
! AACAATTGACATGTAACATT+AGG + chr1_4:54117510-54117529 Msa0170200:intron 25.0%
!!! CTAAATCAAATTCTAAGATG+AGG - chr1_4:54117608-54117627 None:intergenic 25.0%
!! CTCATCTTAGAATTTGATTT+AGG + chr1_4:54117606-54117625 Msa0170200:intron 25.0%
! ATTTAGGCCTAAATATATAC+TGG + chr1_4:54117622-54117641 Msa0170200:intron 25.0%
! TTTAGGCCTAAATATATACT+GGG + chr1_4:54117623-54117642 Msa0170200:intron 25.0%
!! ATTTTCAAATTCTCTTATGC+AGG + chr1_4:54117673-54117692 Msa0170200:intron 25.0%
! TGATAATATTGCTGAAGAAA+CGG + chr1_4:54118004-54118023 Msa0170200:CDS 25.0%
! TCAAATTGATGAGATAGTAT+CGG + chr1_4:54118187-54118206 Msa0170200:intron 25.0%
!!! TTTGTTTTTTCAAAGTCTAC+TGG - chr1_4:54118243-54118262 None:intergenic 25.0%
! ATTAACAATTTAGAAGTTCG+TGG - chr1_4:54118377-54118396 None:intergenic 25.0%
! AATTGAAATGTAATGATGAC+TGG - chr1_4:54118405-54118424 None:intergenic 25.0%
! TTAATTGAAGATAAACATCC+AGG - chr1_4:54118463-54118482 None:intergenic 25.0%
! CTTGAAGGTTATCAAAAAAT+TGG + chr1_4:54118483-54118502 Msa0170200:CDS 25.0%
!!! TGACTTTCTATTTTGATCAA+AGG + chr1_4:54118753-54118772 Msa0170200:intron 25.0%
!! TTTCTTATTTCTTCACTTTC+TGG + chr1_4:54118906-54118925 Msa0170200:intron 25.0%
! ATGTACTCCATATCTTAAAT+GGG + chr1_4:54119596-54119615 Msa0170200:intron 25.0%
! ATATACAGTTCCTTTGTAAA+TGG + chr1_4:54119664-54119683 Msa0170200:intron 25.0%
!! TATGCTACTTAATCATATGA+TGG + chr1_4:54120082-54120101 Msa0170200:intron 25.0%
! AGGTAATAGGATATTATGAT+AGG - chr1_4:54120455-54120474 None:intergenic 25.0%
!! ATATACCTGTTTTGCATATT+TGG - chr1_4:54120478-54120497 None:intergenic 25.0%
!!! ATAAGTTTTAACATGCAAGT+GGG - chr1_4:54121022-54121041 None:intergenic 25.0%
!!! AATAAGTTTTAACATGCAAG+TGG - chr1_4:54121023-54121042 None:intergenic 25.0%
! TTGCATGTTAAAACTTATTG+TGG + chr1_4:54121024-54121043 Msa0170200:intron 25.0%
!!! AATAATAGCGAATTTGTTGA+AGG + chr1_4:54121086-54121105 Msa0170200:intron 25.0%
!!! ATAATAGCGAATTTGTTGAA+GGG + chr1_4:54121087-54121106 Msa0170200:intron 25.0%
!!! ATAAAGGGGATACATTTTTT+TGG - chr1_4:54121173-54121192 None:intergenic 25.0%
! ATTATGTTCAAAACTAAAGC+AGG - chr1_4:54121251-54121270 None:intergenic 25.0%
!! AGAAATACTTGAGTTCATTT+TGG + chr1_4:54121292-54121311 Msa0170200:CDS 25.0%
!! GAAATACTTGAGTTCATTTT+GGG + chr1_4:54121293-54121312 Msa0170200:CDS 25.0%
!!! TTTTTGAGCATTGATTTCTA+TGG + chr1_4:54121514-54121533 Msa0170200:intron 25.0%
! ATCAATGCTGTCTAATTTAA+TGG + chr1_4:54121587-54121606 Msa0170200:CDS 25.0%
! TTTCAGTGTTTGAAAATTTC+TGG - chr1_4:54121644-54121663 None:intergenic 25.0%
!! AATTTTCAAACACTGAAACT+AGG + chr1_4:54121646-54121665 Msa0170200:CDS 25.0%
!! TCAGATCTAAGACATAATAT+TGG - chr1_4:54121704-54121723 None:intergenic 25.0%
! AAATTCAAACTAACAAGCAA+GGG - chr1_4:54121876-54121895 None:intergenic 25.0%
! TAAATTCAAACTAACAAGCA+AGG - chr1_4:54121877-54121896 None:intergenic 25.0%
! TAGTTTGAATTTACTAACCT+TGG + chr1_4:54121884-54121903 Msa0170200:intron 25.0%
!!! TTGATTTTTTCTTGTATGTC+AGG + chr1_4:54122181-54122200 Msa0170200:intron 25.0%
! ATCATAATTCAATAGCATTG+TGG - chr1_4:54122238-54122257 None:intergenic 25.0%
! TTAATTGAGAAAAGACATGT+TGG - chr1_4:54122462-54122481 None:intergenic 25.0%
!! AACATGTCTTTTCTCAATTA+AGG + chr1_4:54122461-54122480 Msa0170200:intron 25.0%
! TTAACTACTATAGAAAAGTG+CGG + chr1_4:54122572-54122591 Msa0170200:intron 25.0%
!!! AATATAGTTTTAAGCAAACG+AGG - chr1_4:54122634-54122653 None:intergenic 25.0%
! ATGCTTAATCTACAAAATGA+AGG - chr1_4:54122777-54122796 None:intergenic 25.0%
!! GACTAAAATTGATTCTTTCT+GGG - chr1_4:54122887-54122906 None:intergenic 25.0%
!! AGACTAAAATTGATTCTTTC+TGG - chr1_4:54122888-54122907 None:intergenic 25.0%
! AACTATACATCATGAGAAAT+TGG + chr1_4:54123213-54123232 Msa0170200:intron 25.0%
! ATGAAAACTAACATAATCCA+AGG - chr1_4:54123264-54123283 None:intergenic 25.0%
!! TATCAGTTCATTCTTTGAAA+TGG - chr1_4:54123490-54123509 None:intergenic 25.0%
! AATGAACTAAGGATAATTGT+TGG + chr1_4:54123545-54123564 Msa0170200:intron 25.0%
!!! AAGGATAATTGTTGGTTTAA+TGG + chr1_4:54123553-54123572 Msa0170200:intron 25.0%
! CGCTAAGAAGTTTAAATAAA+GGG - chr1_4:54123889-54123908 None:intergenic 25.0%
! TCGCTAAGAAGTTTAAATAA+AGG - chr1_4:54123890-54123909 None:intergenic 25.0%
! GGGAAAAATTAATAAAAAGC+AGG - chr1_4:54124147-54124166 None:intergenic 25.0%
! ATTGATATTCTTCCAGTTAT+TGG + chr1_4:54124317-54124336 Msa0170200:CDS 25.0%
! AAGTAAAAGTTTACGTAAGT+TGG - chr1_4:54124450-54124469 None:intergenic 25.0%
!!! GTTTTCAAGACAATACTTTT+GGG + chr1_4:54124641-54124660 Msa0170200:intron 25.0%
! ATATATCTATGAAAACCTGA+AGG - chr1_4:54124736-54124755 None:intergenic 25.0%
!!! CAATTGTTTTATATCTCCTA+CGG + chr1_4:54124786-54124805 Msa0170200:CDS 25.0%
! AGATGCAGATCATAAAAAAA+TGG - chr1_4:54124848-54124867 None:intergenic 25.0%
! GAACAACAATATAAGTAATG+AGG - chr1_4:54124922-54124941 None:intergenic 25.0%
!! TAACATTTTGTACTATAGAG+TGG + chr1_4:54125000-54125019 Msa0170200:CDS 25.0%
!! AACATTTTGTACTATAGAGT+GGG + chr1_4:54125001-54125020 Msa0170200:CDS 25.0%
! TCATAAAAGGAAACTAAAGA+AGG - chr1_4:54125080-54125099 None:intergenic 25.0%
!!! ATATAGTTGATGAAATGTGA+TGG + chr1_4:54125428-54125447 Msa0170200:intron 25.0%
! TAAGCAAAACTTTGTTCTTT+AGG + chr1_4:54125490-54125509 Msa0170200:intron 25.0%
! CATTCAATAAATGTTGTATG+CGG + chr1_4:54125515-54125534 Msa0170200:intron 25.0%
!! AAGATTATGAATCTTTTGGT+TGG - chr1_4:54125855-54125874 None:intergenic 25.0%
! CTTATTCAAAATGTATGTGA+TGG + chr1_4:54125872-54125891 Msa0170200:intron 25.0%
! TATTCAAAATGTATGTGATG+GGG + chr1_4:54125874-54125893 Msa0170200:intron 25.0%
! GAAAATGCAATATATGTCTA+AGG - chr1_4:54126266-54126285 None:intergenic 25.0%
! CATTGGATCTACTATATATA+GGG + chr1_4:54126338-54126357 Msa0170200:intron 25.0%
! TTTGTCATAAATACACATCT+TGG + chr1_4:54126380-54126399 Msa0170200:intron 25.0%
! TGGTAAACAAATTAAGAGTT+TGG + chr1_4:54126400-54126419 Msa0170200:intron 25.0%
!! TTGCTAAAAGTATGTATTGT+TGG + chr1_4:54127128-54127147 Msa0170200:intron 25.0%
!! TAAAAGTATGTATTGTTGGA+TGG + chr1_4:54127132-54127151 Msa0170200:intron 25.0%
! AACAATTGTGTTTGATATGT+TGG + chr1_4:54127277-54127296 Msa0170200:CDS 25.0%
!!! AAGGATTTTTGACTTTTGTT+TGG + chr1_4:54127349-54127368 Msa0170200:CDS 25.0%
!!! AGTTCAAAACATTGATTTAG+TGG + chr1_4:54127403-54127422 Msa0170200:CDS 25.0%
! TCAATACTCCTTATAAAAAG+AGG - chr1_4:54127491-54127510 None:intergenic 25.0%
!!! TTTTTATAAGGAGTATTGAG+TGG + chr1_4:54127492-54127511 Msa0170200:CDS 25.0%
!!! TTTTATAAGGAGTATTGAGT+GGG + chr1_4:54127493-54127512 Msa0170200:CDS 25.0%
!! CATATCCTTTTCATATTTCT+AGG + chr1_4:54127908-54127927 Msa0170200:intron 25.0%
! AATGACCTAGAAATATGAAA+AGG - chr1_4:54127916-54127935 None:intergenic 25.0%
!! AAAAAGAAGGCTAAGATTTT+GGG + chr1_4:54128027-54128046 Msa0170200:CDS 25.0%
! TAAAGTAACTTTAGATGGAA+TGG - chr1_4:54128326-54128345 None:intergenic 25.0%
! ATATCACAAATTATACTTCG+CGG - chr1_4:54128633-54128652 None:intergenic 25.0%
! TTACTCAAAATAGGAGAAAA+AGG - chr1_4:54128659-54128678 None:intergenic 25.0%
!! ACTTAAGTGTTACTCAAAAT+AGG - chr1_4:54128668-54128687 None:intergenic 25.0%
!! TGCCTTAAATTTTCTTTTGT+AGG + chr1_4:54128733-54128752 Msa0170200:intron 25.0%
! CTAGAATTGTGTAATCATAT+AGG + chr1_4:54129005-54129024 Msa0170200:three_prime_UTR 25.0%
! AACATATTATGGCCATTTAA+AGG + chr1_4:54129050-54129069 Msa0170200:three_prime_UTR 25.0%
AAGGAAGAATTGAGAAGTTA+GGG - chr1_4:54111330-54111349 None:intergenic 30.0%
TCTATCCAATTCTTTACTCT+GGG - chr1_4:54111723-54111742 None:intergenic 30.0%
AGAGTAAAGAATTGGATAGA+GGG + chr1_4:54111723-54111742 Msa0170200:CDS 30.0%
CCAGAAAGTAGTTTCAAATA+CGG - chr1_4:54111794-54111813 None:intergenic 30.0%
! TGTATGGTGATTATGTTTTG+TGG + chr1_4:54111904-54111923 Msa0170200:intron 30.0%
!! TATTGGTTTCTGTTAAGGAA+TGG + chr1_4:54112128-54112147 Msa0170200:intron 30.0%
TTCTGTTAAGGAATGGTATA+TGG + chr1_4:54112135-54112154 Msa0170200:intron 30.0%
TCTGTTAAGGAATGGTATAT+GGG + chr1_4:54112136-54112155 Msa0170200:intron 30.0%
TCTTAAACATCTAAACACAC+GGG - chr1_4:54112282-54112301 None:intergenic 30.0%
!! TTCTTTGAAGGATTTTTGGA+TGG - chr1_4:54112348-54112367 None:intergenic 30.0%
AAGCCAATTACATTCTTTGA+AGG - chr1_4:54112360-54112379 None:intergenic 30.0%
ATATATCCTTTCGTGAATTC+TGG + chr1_4:54112441-54112460 Msa0170200:CDS 30.0%
CGAGTAACCAAATAAACAAA+AGG - chr1_4:54112564-54112583 None:intergenic 30.0%
TAATTCTCTTGTAGCTAAGT+TGG + chr1_4:54112650-54112669 Msa0170200:intron 30.0%
!!! CTTTTAAGAAGTGCTATTCA+CGG + chr1_4:54112684-54112703 Msa0170200:intron 30.0%
TGATTCTACGGTTGATTATA+TGG + chr1_4:54112767-54112786 Msa0170200:intron 30.0%
! TTGTTTGATATTGCTATTCC+GGG - chr1_4:54112811-54112830 None:intergenic 30.0%
! CTTGTTTGATATTGCTATTC+CGG - chr1_4:54112812-54112831 None:intergenic 30.0%
!! TCTGTACAATTTTGCTATGA+AGG + chr1_4:54112894-54112913 Msa0170200:intron 30.0%
GACAATGCATTATATATGCA+AGG + chr1_4:54113034-54113053 Msa0170200:intron 30.0%
TTCCTCCTCAATTTCAAATA+TGG - chr1_4:54113111-54113130 None:intergenic 30.0%
TTCTCAAACACACATGTTTA+AGG + chr1_4:54113186-54113205 Msa0170200:intron 30.0%
ATGTTCTTTGGTCTATTTGA+CGG - chr1_4:54113240-54113259 None:intergenic 30.0%
!!! ATATCTATCATCTGGCTTTT+TGG + chr1_4:54113294-54113313 Msa0170200:intron 30.0%
AAGGTCTATGTTAGTAAACT+TGG + chr1_4:54113349-54113368 Msa0170200:intron 30.0%
! TAAACTATAAATTTGAGGCC+AGG - chr1_4:54113500-54113519 None:intergenic 30.0%
ACAGAATCTAAGAACAAGAT+TGG - chr1_4:54113567-54113586 None:intergenic 30.0%
ATCAAACCATTCAAAAGTGA+TGG - chr1_4:54113760-54113779 None:intergenic 30.0%
!! CTAAAGATCTTCATTGGTTT+CGG + chr1_4:54113818-54113837 Msa0170200:CDS 30.0%
CAAGATTGATTAAGGCAATA+AGG - chr1_4:54113849-54113868 None:intergenic 30.0%
TGACAGAACAAGAAGAAAAT+AGG - chr1_4:54113931-54113950 None:intergenic 30.0%
AAAGTTTCTCATTGTTCTGT+TGG + chr1_4:54114216-54114235 Msa0170200:CDS 30.0%
TTATCACCTGCAGATAATTA+GGG - chr1_4:54114245-54114264 None:intergenic 30.0%
ATTATCACCTGCAGATAATT+AGG - chr1_4:54114246-54114265 None:intergenic 30.0%
TATGATCATTTGCAGTTCTA+AGG + chr1_4:54114331-54114350 Msa0170200:intron 30.0%
TGATGAACAGAGTCATTTAT+GGG - chr1_4:54114401-54114420 None:intergenic 30.0%
ATGATGAACAGAGTCATTTA+TGG - chr1_4:54114402-54114421 None:intergenic 30.0%
!! ATAGTTTCACACAAGTTGAT+AGG - chr1_4:54114439-54114458 None:intergenic 30.0%
GTGAAACTATCAGAAAAAGT+TGG + chr1_4:54114449-54114468 Msa0170200:CDS 30.0%
TCATTCAAATGTCAATTAGC+TGG + chr1_4:54114740-54114759 Msa0170200:intron 30.0%
ATATCTCGATGTCAAAAGTT+TGG + chr1_4:54115017-54115036 Msa0170200:CDS 30.0%
CTGCTTGATATAAATTCTTC+GGG + chr1_4:54115208-54115227 Msa0170200:CDS 30.0%
! CAGTATAAACGTACAGTTTT+GGG - chr1_4:54115297-54115316 None:intergenic 30.0%
! TCAGTATAAACGTACAGTTT+TGG - chr1_4:54115298-54115317 None:intergenic 30.0%
CAAAAAAAAAATCAGCCCAT+AGG - chr1_4:54115370-54115389 None:intergenic 30.0%
TACAATAATCTCTGATCATG+GGG + chr1_4:54115428-54115447 Msa0170200:intron 30.0%
! AAAATGTGAAGCAACCTTTT+AGG - chr1_4:54115497-54115516 None:intergenic 30.0%
TGAAATGGAACTCAACATAT+AGG - chr1_4:54115561-54115580 None:intergenic 30.0%
! AAAATGTGAAGCAACCTTTT+CGG - chr1_4:54115497-54115516 None:intergenic 30.0%
TGAAATGGAACTCAACATAT+AGG - chr1_4:54115561-54115580 None:intergenic 30.0%
TGATAGAAGACTTGATTATG+TGG + chr1_4:54116090-54116109 Msa0170200:intron 30.0%
ATTATGTGGTGTACAAAGTA+GGG + chr1_4:54116104-54116123 Msa0170200:intron 30.0%
ATGGGGTAATCTTCATAAAT+TGG + chr1_4:54116278-54116297 Msa0170200:intron 30.0%
TCGGTTATGCACAATAATAA+TGG - chr1_4:54116399-54116418 None:intergenic 30.0%
AACGGTATAGTTAAATGGTT+GGG - chr1_4:54116444-54116463 None:intergenic 30.0%
!! ACAAAACATTTTGGGTAGAA+CGG - chr1_4:54116462-54116481 None:intergenic 30.0%
! CCTGATCAACAAAACATTTT+GGG - chr1_4:54116470-54116489 None:intergenic 30.0%
!! CCAAAATGTTTTGTTGATCA+GGG + chr1_4:54116468-54116487 Msa0170200:intron 30.0%
ATCATCAAACTGTCTCAATA+TGG - chr1_4:54116514-54116533 None:intergenic 30.0%
TTGGAACATAACATGTATGT+TGG - chr1_4:54116738-54116757 None:intergenic 30.0%
GTTATGTTCCAAAGTGAATA+TGG + chr1_4:54116746-54116765 Msa0170200:intron 30.0%
AGCCATTCATCAAAAATAAC+AGG - chr1_4:54117004-54117023 None:intergenic 30.0%
!!! TGTTATTTTTGATGAATGGC+TGG + chr1_4:54117003-54117022 Msa0170200:intron 30.0%
! TAGTACCAAATTGATGACTA+TGG + chr1_4:54117122-54117141 Msa0170200:intron 30.0%
TAACACCATAGTCATCAATT+TGG - chr1_4:54117130-54117149 None:intergenic 30.0%
! TAGTACCAAATTGATGACTA+TGG + chr1_4:54117122-54117141 Msa0170200:intron 30.0%
TAACACCATAGTCATCAATT+TGG - chr1_4:54117130-54117149 None:intergenic 30.0%
GCTGAGAAATAAATGATTGT+TGG + chr1_4:54117397-54117416 Msa0170200:intron 30.0%
AATAAATGATTGTTGGACCA+AGG + chr1_4:54117404-54117423 Msa0170200:intron 30.0%
!! AAGGAGTAATGGATAAATCA+TGG - chr1_4:54117797-54117816 None:intergenic 30.0%
! AAATCTTTCTTTTCAACCTG+TGG - chr1_4:54117826-54117845 None:intergenic 30.0%
TTCAGATTTATGCTTTGTCT+TGG + chr1_4:54117887-54117906 Msa0170200:intron 30.0%
GGACTTAAATTTAAAAGCTC+TGG + chr1_4:54117950-54117969 Msa0170200:CDS 30.0%
! ACTTTTTGAACAACAGACAT+TGG - chr1_4:54118159-54118178 None:intergenic 30.0%
! GACTGATTCTATATTCATCT+CGG - chr1_4:54118213-54118232 None:intergenic 30.0%
AGTCAAACTTATAGTATGTC+AGG - chr1_4:54118296-54118315 None:intergenic 30.0%
CATACTATAAGTTTGACTGT+AGG + chr1_4:54118298-54118317 Msa0170200:intron 30.0%
TATAAGTTTGACTGTAGGAA+TGG + chr1_4:54118303-54118322 Msa0170200:intron 30.0%
AAGGTTATCAAAAAATTGGC+TGG + chr1_4:54118487-54118506 Msa0170200:CDS 30.0%
AATCGATATTATCTTCATGG+TGG - chr1_4:54118525-54118544 None:intergenic 30.0%
ACCATGAAGATAATATCGAT+TGG + chr1_4:54118524-54118543 Msa0170200:CDS 30.0%
ACCAATCGATATTATCTTCA+TGG - chr1_4:54118528-54118547 None:intergenic 30.0%
! GACAAAGAAAACAAACCTTT+TGG - chr1_4:54118631-54118650 None:intergenic 30.0%
TACATAACGACACAAACAAA+TGG + chr1_4:54118679-54118698 Msa0170200:intron 30.0%
!! CACAAACAAATGGATTAGTT+AGG + chr1_4:54118689-54118708 Msa0170200:intron 30.0%
! TGAAGTGTTAGACTTAAACT+CGG + chr1_4:54118978-54118997 Msa0170200:CDS 30.0%
ACCTCTAAATGCAAAAGTTA+TGG + chr1_4:54119044-54119063 Msa0170200:CDS 30.0%
!! AAGTTATGGCTTGCATATTT+TGG + chr1_4:54119058-54119077 Msa0170200:CDS 30.0%
TAATTCCTTCCGTATTTGTT+TGG + chr1_4:54119134-54119153 Msa0170200:intron 30.0%
! GGAATTCAATTTTGTCTTAG+TGG + chr1_4:54119155-54119174 Msa0170200:intron 30.0%
CAACATTTGAAGAACATAAG+AGG - chr1_4:54119349-54119368 None:intergenic 30.0%
! TTTTTCGCTTTGTCAAAGTT+CGG + chr1_4:54119462-54119481 Msa0170200:CDS 30.0%
!!! TCTAAGTTTTTTACAGACGA+AGG + chr1_4:54119546-54119565 Msa0170200:CDS 30.0%
GATGTACTCCATATCTTAAA+TGG + chr1_4:54119595-54119614 Msa0170200:intron 30.0%
!!! TTATGTTGCTCTTATTTTCC+AGG + chr1_4:54119754-54119773 Msa0170200:intron 30.0%
TAATTATAGAACATGTCACC+TGG - chr1_4:54119775-54119794 None:intergenic 30.0%
! TTTTGAATCTTTTCCTGTGT+AGG + chr1_4:54119838-54119857 Msa0170200:intron 30.0%
! TGGATGTCAAACTGATATTT+TGG + chr1_4:54119927-54119946 Msa0170200:CDS 30.0%
TATATATGGTTGTGGACAAA+TGG + chr1_4:54120039-54120058 Msa0170200:intron 30.0%
!! TCTTGATTTTTGAGGAAATC+TGG + chr1_4:54120111-54120130 Msa0170200:intron 30.0%
AAATTCTTTGCAGTCTGTAA+GGG + chr1_4:54120164-54120183 Msa0170200:intron 30.0%
TAACTTAACAATACACTCCA+TGG - chr1_4:54120196-54120215 None:intergenic 30.0%
TTTGCATATTTGGAGGTAAT+AGG - chr1_4:54120468-54120487 None:intergenic 30.0%
ATAGTTGTGTTGTGATAAAG+TGG - chr1_4:54120533-54120552 None:intergenic 30.0%
AGATCTTTCAAATGTGTAGA+GGG + chr1_4:54120598-54120617 Msa0170200:intron 30.0%
! CTCAAATACTTTAAAAAGCC+AGG - chr1_4:54120689-54120708 None:intergenic 30.0%
! TTGCTAAGAAAGTACAGATT+AGG + chr1_4:54120722-54120741 Msa0170200:intron 30.0%
! TGCTAAGAAAGTACAGATTA+GGG + chr1_4:54120723-54120742 Msa0170200:intron 30.0%
AAAGTACAGATTAGGGTTTA+GGG + chr1_4:54120730-54120749 Msa0170200:intron 30.0%
AGGGTAATTTCCTAAAGTAA+TGG + chr1_4:54121106-54121125 Msa0170200:intron 30.0%
CAACAAAATGCCATTACTTT+AGG - chr1_4:54121119-54121138 None:intergenic 30.0%
! AAGTAATGGCATTTTGTTGA+AGG + chr1_4:54121120-54121139 Msa0170200:intron 30.0%
! AGTAATGGCATTTTGTTGAA+GGG + chr1_4:54121121-54121140 Msa0170200:intron 30.0%
!!! AGTTCATTTTGGGTTATACT+GGG + chr1_4:54121303-54121322 Msa0170200:CDS 30.0%
ACACACTAAGCTATTAAATC+TGG - chr1_4:54121454-54121473 None:intergenic 30.0%
AGATTTAATAGCTTAGTGTG+TGG + chr1_4:54121453-54121472 Msa0170200:intron 30.0%
GATTTAATAGCTTAGTGTGT+GGG + chr1_4:54121454-54121473 Msa0170200:intron 30.0%
!!! GACAGCATTGATGATATTTT+AGG - chr1_4:54121579-54121598 None:intergenic 30.0%
GAGCGATACTATAATAAACA+CGG + chr1_4:54121609-54121628 Msa0170200:CDS 30.0%
GCTTAATAGTCAATTCTACA+CGG + chr1_4:54121985-54122004 Msa0170200:CDS 30.0%
CTTAATAGTCAATTCTACAC+GGG + chr1_4:54121986-54122005 Msa0170200:CDS 30.0%
TTAATAGTCAATTCTACACG+GGG + chr1_4:54121987-54122006 Msa0170200:CDS 30.0%
!!! TTGATTTTTTCTTGCATGTC+AGG + chr1_4:54122317-54122336 Msa0170200:intron 30.0%
! AAATGTGAGTTTCTTGCTTT+TGG + chr1_4:54122425-54122444 Msa0170200:intron 30.0%
!! CTTTTGTTTGTTTTCCTCTT+CGG + chr1_4:54122486-54122505 Msa0170200:intron 30.0%
CCACTAAAGAAATACAAAAC+AGG - chr1_4:54122514-54122533 None:intergenic 30.0%
! CCTGTTTTGTATTTCTTTAG+TGG + chr1_4:54122511-54122530 Msa0170200:intron 30.0%
!!! TCTGCAATTGGCTTATTTTA+GGG - chr1_4:54122686-54122705 None:intergenic 30.0%
ACTAGAAAAGGAAATTGATC+AGG - chr1_4:54122923-54122942 None:intergenic 30.0%
TCTGACAAATCAATTGACTA+TGG + chr1_4:54123051-54123070 Msa0170200:intron 30.0%
! TTCCAAATATGTTTTCGTAG+AGG + chr1_4:54123085-54123104 Msa0170200:intron 30.0%
TTCCTCTACGAAAACATATT+TGG - chr1_4:54123090-54123109 None:intergenic 30.0%
CATGAAATGTGAAAATATGC+CGG + chr1_4:54123155-54123174 Msa0170200:intron 30.0%
ATGAAATGTGAAAATATGCC+GGG + chr1_4:54123156-54123175 Msa0170200:intron 30.0%
! CCTTAGTTCATTCTTTGAAA+TGG - chr1_4:54123537-54123556 None:intergenic 30.0%
CCATTTCAAAGAATGAACTA+AGG + chr1_4:54123534-54123553 Msa0170200:intron 30.0%
CAGATAGATTTCAAAACTGT+TGG + chr1_4:54123581-54123600 Msa0170200:intron 30.0%
CATATGCAGAATAGATAATC+TGG + chr1_4:54123706-54123725 Msa0170200:CDS 30.0%
CAGTAACAAAACATCAAGAA+GGG - chr1_4:54123747-54123766 None:intergenic 30.0%
TCAGTAACAAAACATCAAGA+AGG - chr1_4:54123748-54123767 None:intergenic 30.0%
TGAAGAAAGACATAACAAAC+AGG + chr1_4:54123765-54123784 Msa0170200:CDS 30.0%
!! CGAAGTATTTTCAGAAGAAT+GGG + chr1_4:54123907-54123926 Msa0170200:CDS 30.0%
! ATTAATTTTTCCCTCTTGAC+AGG + chr1_4:54124154-54124173 Msa0170200:intron 30.0%
CAGAAAGCAGAGAAAATATA+TGG - chr1_4:54124256-54124275 None:intergenic 30.0%
!! TCTTACCAGAAAAAGTGTTT+GGG + chr1_4:54124288-54124307 Msa0170200:CDS 30.0%
! AATCCTTGATTTTCATGCTT+GGG + chr1_4:54124409-54124428 Msa0170200:intron 30.0%
! GTAAGTTGGAAGATTTAATG+TGG - chr1_4:54124436-54124455 None:intergenic 30.0%
CACATACATAAACACATAAG+TGG - chr1_4:54124518-54124537 None:intergenic 30.0%
TCATTCAAAGCATGTATTTG+AGG + chr1_4:54124549-54124568 Msa0170200:CDS 30.0%
!! GGTTTTCAAGACAATACTTT+TGG + chr1_4:54124640-54124659 Msa0170200:intron 30.0%
!! AATCATGTATAAAGTACCGT+AGG - chr1_4:54124805-54124824 None:intergenic 30.0%
AATGGTGAAGTTACAATACT+AGG - chr1_4:54124830-54124849 None:intergenic 30.0%
TTATGATCTGCATCTTACAA+TGG + chr1_4:54124853-54124872 Msa0170200:intron 30.0%
! GTACAAAATGTTAAAGCATC+TGG - chr1_4:54124993-54125012 None:intergenic 30.0%
AACAGTATACAAGTATGACT+TGG + chr1_4:54125051-54125070 Msa0170200:CDS 30.0%
ATTTCCTCTCTGTTCATAAA+AGG - chr1_4:54125093-54125112 None:intergenic 30.0%
! TCTAGTTTGAACAACAATTC+AGG - chr1_4:54125188-54125207 None:intergenic 30.0%
! TTGTTGTTCAAACTAGAATC+AGG + chr1_4:54125191-54125210 Msa0170200:CDS 30.0%
TTGTTGCATTATTTGTGATC+TGG - chr1_4:54125246-54125265 None:intergenic 30.0%
TATTAATGCTAAAGCAGTCT+TGG + chr1_4:54125650-54125669 Msa0170200:intron 30.0%
TACTAAGATTGTGATATCAG+TGG + chr1_4:54125746-54125765 Msa0170200:intron 30.0%
TCTTGTAGATGCAAGAAAAA+AGG + chr1_4:54125953-54125972 Msa0170200:CDS 30.0%
TAAATTTCTCTGTCATTGTG+AGG + chr1_4:54125979-54125998 Msa0170200:CDS 30.0%
TGTTGTGAGGAATATAACAA+TGG + chr1_4:54126028-54126047 Msa0170200:CDS 30.0%
GATCATTCAGATAAAGATGT+TGG + chr1_4:54126095-54126114 Msa0170200:CDS 30.0%
AGATAAAGATGTTGGAGAAA+AGG + chr1_4:54126103-54126122 Msa0170200:CDS 30.0%
! ACATATTTTACCTATGCCAT+TGG + chr1_4:54126321-54126340 Msa0170200:intron 30.0%
CCTATATATAGTAGATCCAA+TGG - chr1_4:54126340-54126359 None:intergenic 30.0%
CCATTGGATCTACTATATAT+AGG + chr1_4:54126337-54126356 Msa0170200:intron 30.0%
AACAAGAACAGAAACAAGAT+GGG - chr1_4:54126939-54126958 None:intergenic 30.0%
TAACAAGAACAGAAACAAGA+TGG - chr1_4:54126940-54126959 None:intergenic 30.0%
! TGTTTCTGTTCTTGTTACTT+TGG + chr1_4:54126943-54126962 Msa0170200:CDS 30.0%
AAAAAATATCATGGAGCTTC+TGG + chr1_4:54127009-54127028 Msa0170200:CDS 30.0%
! GTTGGGTATATTTCTAACAA+TGG - chr1_4:54127230-54127249 None:intergenic 30.0%
GATATGTTGGCAACATTTAT+TGG + chr1_4:54127290-54127309 Msa0170200:CDS 30.0%
AAAAGTCAAAAATCCTTCCA+TGG - chr1_4:54127346-54127365 None:intergenic 30.0%
!! TCAATGTTTTGAACTGAATG+AGG - chr1_4:54127398-54127417 None:intergenic 30.0%
!! AACATTGATTTAGTGGAAGA+AGG + chr1_4:54127410-54127429 Msa0170200:CDS 30.0%
! TGTTCAAGCCTCTTTTTATA+AGG + chr1_4:54127480-54127499 Msa0170200:CDS 30.0%
! AGTCAAAAGACACTTTGTTT+AGG + chr1_4:54127681-54127700 Msa0170200:intron 30.0%
! CTAAGCAAGTATTTGAAGTA+AGG - chr1_4:54127946-54127965 None:intergenic 30.0%
! GACTCGAACTAAACATTTTA+AGG - chr1_4:54128002-54128021 None:intergenic 30.0%
! GAAAAAGAAGGCTAAGATTT+TGG + chr1_4:54128026-54128045 Msa0170200:CDS 30.0%
AAAAATTCACTCGATGAAAC+GGG - chr1_4:54128280-54128299 None:intergenic 30.0%
CAAAAATTCACTCGATGAAA+CGG - chr1_4:54128281-54128300 None:intergenic 30.0%
!! AGATCAAGTTGAGAAACAAT+AGG - chr1_4:54128481-54128500 None:intergenic 30.0%
AAAAATTTGTAAGCTGCAAG+AGG - chr1_4:54128713-54128732 None:intergenic 30.0%
!! CTTCTTTCAAGTTATCTACA+AGG - chr1_4:54128826-54128845 None:intergenic 30.0%
GTAGACCAATGAACATATTA+TGG + chr1_4:54129039-54129058 Msa0170200:three_prime_UTR 30.0%
AATGGCCATAATATGTTCAT+TGG - chr1_4:54129047-54129066 None:intergenic 30.0%
ATTATGGCCATTTAAAGGAA+AGG + chr1_4:54129055-54129074 Msa0170200:three_prime_UTR 30.0%
! AAGCGTGAATCCTTTTTAAA+TGG + chr1_4:54129174-54129193 Msa0170200:three_prime_UTR 30.0%
ATAGAGGAAATTTCAGTTGG+CGG + chr1_4:54111195-54111214 Msa0170200:five_prime_UTR 35.0%
GAATTGAGAAGTTAGGGTTA+GGG - chr1_4:54111324-54111343 None:intergenic 35.0%
AGAATTGAGAAGTTAGGGTT+AGG - chr1_4:54111325-54111344 None:intergenic 35.0%
GAAGGAAGAATTGAGAAGTT+AGG - chr1_4:54111331-54111350 None:intergenic 35.0%
! TTGCTAGAATTTTGCGATGA+AGG - chr1_4:54111349-54111368 None:intergenic 35.0%
TCATCGCAAAATTCTAGCAA+TGG + chr1_4:54111349-54111368 Msa0170200:exon 35.0%
TTAGGATCGAACAAGATAGA+AGG - chr1_4:54111458-54111477 None:intergenic 35.0%
!!! TGAGTTTTTGGTTGTGTTTC+AGG + chr1_4:54111635-54111654 Msa0170200:intron 35.0%
!! TTTTGGTTGTGTTTCAGGAT+TGG + chr1_4:54111640-54111659 Msa0170200:intron 35.0%
CTATCCAATTCTTTACTCTG+GGG - chr1_4:54111722-54111741 None:intergenic 35.0%
CTCTATCCAATTCTTTACTC+TGG - chr1_4:54111724-54111743 None:intergenic 35.0%
CAGAGTAAAGAATTGGATAG+AGG + chr1_4:54111722-54111741 Msa0170200:CDS 35.0%
! CCGTATTTGAAACTACTTTC+TGG + chr1_4:54111791-54111810 Msa0170200:CDS 35.0%
GGTTGTGTTGTGAATTGTAA+TGG + chr1_4:54112092-54112111 Msa0170200:intron 35.0%
GGTATATGGGAGTTTCTTAA+AGG + chr1_4:54112149-54112168 Msa0170200:CDS 35.0%
! TCTTAAAGGTGTGAAAGACT+CGG + chr1_4:54112163-54112182 Msa0170200:CDS 35.0%
!! TGCTGTTGTTGTTGAAGTTT+TGG + chr1_4:54112386-54112405 Msa0170200:CDS 35.0%
!! GCTGTTGTTGTTGAAGTTTT+GGG + chr1_4:54112387-54112406 Msa0170200:CDS 35.0%
TCTGAAAGATCCTTCTTATC+AGG - chr1_4:54112474-54112493 None:intergenic 35.0%
! ATATTTGGGGTATCATTTGG+TGG + chr1_4:54112526-54112545 Msa0170200:intron 35.0%
!! GTGACGACCTTTTGTTTATT+TGG + chr1_4:54112554-54112573 Msa0170200:intron 35.0%
TAAATGGATCTTGACATGAG+GGG - chr1_4:54112619-54112638 None:intergenic 35.0%
GTAAATGGATCTTGACATGA+GGG - chr1_4:54112620-54112639 None:intergenic 35.0%
TGTAAATGGATCTTGACATG+AGG - chr1_4:54112621-54112640 None:intergenic 35.0%
! TGTTTGATATTGCTATTCCG+GGG - chr1_4:54112810-54112829 None:intergenic 35.0%
AATAACCAAATCCACATAGC+TGG + chr1_4:54112837-54112856 Msa0170200:intron 35.0%
ACTCAATAAAACAACCACTC+AGG - chr1_4:54112868-54112887 None:intergenic 35.0%
TGCATTATATATGCAAGGTC+TGG + chr1_4:54113039-54113058 Msa0170200:intron 35.0%
GCATTATATATGCAAGGTCT+GGG + chr1_4:54113040-54113059 Msa0170200:intron 35.0%
CATTATATATGCAAGGTCTG+GGG + chr1_4:54113041-54113060 Msa0170200:intron 35.0%
!!! TTTTTTTTTTTGTGGTGGCC+GGG - chr1_4:54113074-54113093 None:intergenic 35.0%
!!! CTTTTTTTTTTTGTGGTGGC+CGG - chr1_4:54113075-54113094 None:intergenic 35.0%
! CTCCATATTTGAAATTGAGG+AGG + chr1_4:54113106-54113125 Msa0170200:intron 35.0%
!! TTTGAGAAACAGTTGGTTTG+TGG - chr1_4:54113174-54113193 None:intergenic 35.0%
ATGTGTGTTTGAGAAACAGT+TGG - chr1_4:54113181-54113200 None:intergenic 35.0%
TGTTCTTTGGTCTATTTGAC+GGG - chr1_4:54113239-54113258 None:intergenic 35.0%
ACACAGTGAATGATGTTCTT+TGG - chr1_4:54113252-54113271 None:intergenic 35.0%
CTAACATAGACCTTCCTAAT+GGG - chr1_4:54113343-54113362 None:intergenic 35.0%
ACTAACATAGACCTTCCTAA+TGG - chr1_4:54113344-54113363 None:intergenic 35.0%
GTCTATGTTAGTAAACTTGG+AGG + chr1_4:54113352-54113371 Msa0170200:intron 35.0%
! AGTAAACTTGGAGGTATAGT+TGG + chr1_4:54113361-54113380 Msa0170200:intron 35.0%
! GTAAACTTGGAGGTATAGTT+GGG + chr1_4:54113362-54113381 Msa0170200:intron 35.0%
ATACATGTTCAGTTATAGGG+AGG + chr1_4:54113409-54113428 Msa0170200:intron 35.0%
TACATGTTCAGTTATAGGGA+GGG + chr1_4:54113410-54113429 Msa0170200:intron 35.0%
TGTGAAAAGGGGAATAAAAG+AGG + chr1_4:54113436-54113455 Msa0170200:intron 35.0%
AATGACAATAGTGCAACAGA+AGG - chr1_4:54113682-54113701 None:intergenic 35.0%
! TGTTGCACTATTGTCATTTC+AGG + chr1_4:54113684-54113703 Msa0170200:intron 35.0%
!! TTGATGATAGTTTGCTTGCT+TGG + chr1_4:54113715-54113734 Msa0170200:CDS 35.0%
!! TTAGCTCCATCACTTTTGAA+TGG + chr1_4:54113751-54113770 Msa0170200:CDS 35.0%
TACCTGGACAAGATTGATTA+AGG - chr1_4:54113857-54113876 None:intergenic 35.0%
!! TGGAAGTGTGTCAACATTTT+GGG - chr1_4:54114010-54114029 None:intergenic 35.0%
!! TTGGAAGTGTGTCAACATTT+TGG - chr1_4:54114011-54114030 None:intergenic 35.0%
! TCAAACTGCTCAACTTTTTG+AGG + chr1_4:54114072-54114091 Msa0170200:intron 35.0%
GGCAAATCCCTATAAGAAAA+AGG - chr1_4:54114157-54114176 None:intergenic 35.0%
! TTTTCTTATAGGGATTTGCC+TGG + chr1_4:54114157-54114176 Msa0170200:intron 35.0%
TTTCTTATAGGGATTTGCCT+GGG + chr1_4:54114158-54114177 Msa0170200:intron 35.0%
GACAATTCTAATAAAACCCC+AGG - chr1_4:54114178-54114197 None:intergenic 35.0%
! TTTGCTGTCCTTGATAGAAA+AGG + chr1_4:54114373-54114392 Msa0170200:CDS 35.0%
GATGAACAGAGTCATTTATG+GGG - chr1_4:54114400-54114419 None:intergenic 35.0%
AAATGACTCTGTTCATCATG+TGG + chr1_4:54114403-54114422 Msa0170200:CDS 35.0%
TTGGAAATGGATCTGATGAA+CGG + chr1_4:54114547-54114566 Msa0170200:intron 35.0%
GCATCAAATGATATTTGACC+AGG - chr1_4:54114691-54114710 None:intergenic 35.0%
! AGCAGTTCATCATTTTCTTC+AGG + chr1_4:54114820-54114839 Msa0170200:CDS 35.0%
TAAGATGTTGGATGGCAATT+TGG + chr1_4:54114982-54115001 Msa0170200:CDS 35.0%
TCGATGTCAAAAGTTTGGTT+TGG + chr1_4:54115022-54115041 Msa0170200:CDS 35.0%
TTCAATAGAAAGTCAGTGTG+TGG - chr1_4:54115067-54115086 None:intergenic 35.0%
AACAAGAGAATACACACTTC+AGG - chr1_4:54115107-54115126 None:intergenic 35.0%
! AAACAAGGCATTTGTTTCAG+AGG + chr1_4:54115240-54115259 Msa0170200:CDS 35.0%
!!! TATAAACGTACAGTTTTGGG+AGG - chr1_4:54115294-54115313 None:intergenic 35.0%
AAGTCATTCCACATAATCGT+TGG + chr1_4:54115643-54115662 Msa0170200:intron 35.0%
AGTCATTCCACATAATCGTT+GGG + chr1_4:54115644-54115663 Msa0170200:intron 35.0%
!! TGATAGAAGACTTGATTTGG+AGG + chr1_4:54115685-54115704 Msa0170200:intron 35.0%
GATTATGTGGTGTACAAAGT+AGG + chr1_4:54116103-54116122 Msa0170200:intron 35.0%
TTATGTGGTGTACAAAGTAG+GGG + chr1_4:54116105-54116124 Msa0170200:intron 35.0%
!! AGCTGATTTGAAGTTGACAT+GGG + chr1_4:54116260-54116279 Msa0170200:intron 35.0%
! GTCAAAGCTTTAGTTGTGTT+GGG + chr1_4:54116300-54116319 Msa0170200:intron 35.0%
! GGGGATTTAAAACATGGAAT+AGG - chr1_4:54116424-54116443 None:intergenic 35.0%
! ATGGTTGGGGATTTAAAACA+TGG - chr1_4:54116430-54116449 None:intergenic 35.0%
ACGGTATAGTTAAATGGTTG+GGG - chr1_4:54116443-54116462 None:intergenic 35.0%
GAACGGTATAGTTAAATGGT+TGG - chr1_4:54116445-54116464 None:intergenic 35.0%
GGTAGAACGGTATAGTTAAA+TGG - chr1_4:54116449-54116468 None:intergenic 35.0%
!! CCCAAAATGTTTTGTTGATC+AGG + chr1_4:54116467-54116486 Msa0170200:intron 35.0%
! CCCTGATCAACAAAACATTT+TGG - chr1_4:54116471-54116490 None:intergenic 35.0%
AATGTGCTAAGAAGATGTGT+TGG + chr1_4:54116621-54116640 Msa0170200:CDS 35.0%
CTCTATGCATGATAGAAAGA+TGG - chr1_4:54116950-54116969 None:intergenic 35.0%
AGCAGCATAATAAAGTTCAG+AGG - chr1_4:54117369-54117388 None:intergenic 35.0%
AGCAAGAGCTTAACTAGATT+GGG - chr1_4:54117430-54117449 None:intergenic 35.0%
AAGCAAGAGCTTAACTAGAT+TGG - chr1_4:54117431-54117450 None:intergenic 35.0%
TATTCCCTAACAAAACCCAA+AGG + chr1_4:54117478-54117497 Msa0170200:intron 35.0%
!!! ACTTCCTTTGGGTTTTGTTA+GGG - chr1_4:54117485-54117504 None:intergenic 35.0%
!!! AACTTCCTTTGGGTTTTGTT+AGG - chr1_4:54117486-54117505 None:intergenic 35.0%
TAAATCACCAATCGTATGCA+GGG - chr1_4:54117653-54117672 None:intergenic 35.0%
TTAAATCACCAATCGTATGC+AGG - chr1_4:54117654-54117673 None:intergenic 35.0%
ACCAGCAAGACTAACATTAT+CGG - chr1_4:54117704-54117723 None:intergenic 35.0%
! CTGATCATGGAAGTATGATA+TGG - chr1_4:54117755-54117774 None:intergenic 35.0%
ATACTTCCATGATCAGTACT+TGG + chr1_4:54117759-54117778 Msa0170200:CDS 35.0%
TAAGTAAGAACACGCAAAGT+CGG - chr1_4:54117858-54117877 None:intergenic 35.0%
CAATAAGAGAAGTAATCGTC+AGG - chr1_4:54117922-54117941 None:intergenic 35.0%
AGAAACGGTAAGTAACTACA+TGG + chr1_4:54118019-54118038 Msa0170200:intron 35.0%
GAAACGGTAAGTAACTACAT+GGG + chr1_4:54118020-54118039 Msa0170200:intron 35.0%
! GCTTTTCTAACAACAGACTT+CGG - chr1_4:54118098-54118117 None:intergenic 35.0%
AAGATACTTGTGGTACTAGA+CGG - chr1_4:54118341-54118360 None:intergenic 35.0%
CCAAAACATCAAGATACTTG+TGG - chr1_4:54118351-54118370 None:intergenic 35.0%
! CCACAAGTATCTTGATGTTT+TGG + chr1_4:54118348-54118367 Msa0170200:intron 35.0%
AAAATTGGCTGGCAATTTCA+TGG + chr1_4:54118498-54118517 Msa0170200:CDS 35.0%
! CTTGTGCTGATAAAACCAAA+AGG + chr1_4:54118613-54118632 Msa0170200:CDS 35.0%
AAGTGTGTTTCCTATTCTGA+AGG + chr1_4:54118803-54118822 Msa0170200:CDS 35.0%
! GCCATAACTTTTGCATTTAG+AGG - chr1_4:54119048-54119067 None:intergenic 35.0%
!! TTATGGCTTGCATATTTTGG+AGG + chr1_4:54119061-54119080 Msa0170200:CDS 35.0%
AGATTGCCTGATGATTTATC+TGG - chr1_4:54119105-54119124 None:intergenic 35.0%
TAAATCATCAGGCAATCTAC+TGG + chr1_4:54119107-54119126 Msa0170200:CDS 35.0%
GAATTCCAAACAAATACGGA+AGG - chr1_4:54119142-54119161 None:intergenic 35.0%
ACATAGTTAGCTATGTACCT+AGG + chr1_4:54119200-54119219 Msa0170200:intron 35.0%
AGTGCATTATGTCATTACCT+AGG - chr1_4:54119220-54119239 None:intergenic 35.0%
GGTAATGACATAATGCACTT+AGG + chr1_4:54119221-54119240 Msa0170200:intron 35.0%
TGCTAAAAGTGAATAAGCAG+AGG + chr1_4:54119308-54119327 Msa0170200:intron 35.0%
! ATGAACCTTTTGCAATATGC+AGG + chr1_4:54119410-54119429 Msa0170200:intron 35.0%
ATCATCCTGCATATTGCAAA+AGG - chr1_4:54119418-54119437 None:intergenic 35.0%
ATATGGAGTACATCAAGCAA+CGG - chr1_4:54119589-54119608 None:intergenic 35.0%
! GTGTTGTCCCATTTAAGATA+TGG - chr1_4:54119606-54119625 None:intergenic 35.0%
! TGAGATCTTGCCATTTACAA+AGG - chr1_4:54119677-54119696 None:intergenic 35.0%
!! GGTTCTGAAGCATTATACAT+TGG + chr1_4:54119804-54119823 Msa0170200:intron 35.0%
ATATATGCAGCAAGCAGATA+AGG - chr1_4:54120022-54120041 None:intergenic 35.0%
! CTGCTTGCTGCATATATATA+TGG + chr1_4:54120025-54120044 Msa0170200:intron 35.0%
GCTGCATATATATATGGTTG+TGG + chr1_4:54120031-54120050 Msa0170200:intron 35.0%
! GGATGTTCTCTTGATTTTTG+AGG + chr1_4:54120103-54120122 Msa0170200:intron 35.0%
GAAATTCTTTGCAGTCTGTA+AGG + chr1_4:54120163-54120182 Msa0170200:intron 35.0%
TTGTTAAGTTACACGCTTTG+CGG + chr1_4:54120205-54120224 Msa0170200:CDS 35.0%
ACCTTCATAACTTCCTAAAC+TGG + chr1_4:54120300-54120319 Msa0170200:intron 35.0%
ACCAGTTTAGGAAGTTATGA+AGG - chr1_4:54120304-54120323 None:intergenic 35.0%
TTCCTAAACTGGTTACAACA+GGG + chr1_4:54120311-54120330 Msa0170200:intron 35.0%
TTAGAAGTTCTTCCAGAAAC+TGG - chr1_4:54120339-54120358 None:intergenic 35.0%
TACCTCCAAATATGCAAAAC+AGG + chr1_4:54120470-54120489 Msa0170200:CDS 35.0%
! TACCTGTTTTGCATATTTGG+AGG - chr1_4:54120475-54120494 None:intergenic 35.0%
CTGTGACTATTTCATCTGAA+TGG + chr1_4:54120505-54120524 Msa0170200:intron 35.0%
CTCTACACATTTGAAAGATC+TGG - chr1_4:54120599-54120618 None:intergenic 35.0%
CAGATCTTTCAAATGTGTAG+AGG + chr1_4:54120597-54120616 Msa0170200:intron 35.0%
GATCTTTCAAATGTGTAGAG+GGG + chr1_4:54120599-54120618 Msa0170200:intron 35.0%
! GAAAGTACAGATTAGGGTTT+AGG + chr1_4:54120729-54120748 Msa0170200:intron 35.0%
!! TGTTGAAGGGTAATTTTGAC+CGG + chr1_4:54121134-54121153 Msa0170200:intron 35.0%
!!! GAGTTCATTTTGGGTTATAC+TGG + chr1_4:54121302-54121321 Msa0170200:CDS 35.0%
ACAGAAGAGAATCAATGTGA+AGG - chr1_4:54121358-54121377 None:intergenic 35.0%
AATGATTCTTTCCTTGCTCA+AGG + chr1_4:54121542-54121561 Msa0170200:CDS 35.0%
ATGATTCTTTCCTTGCTCAA+GGG + chr1_4:54121543-54121562 Msa0170200:CDS 35.0%
! TAGGATACTGTGTCTTTTGT+TGG + chr1_4:54121665-54121684 Msa0170200:CDS 35.0%
AGACATTACACAGTTCTACA+TGG - chr1_4:54121769-54121788 None:intergenic 35.0%
AACTGTGTAATGTCTTCTTC+AGG + chr1_4:54121774-54121793 Msa0170200:CDS 35.0%
!!! TTTTTCAAGACAGTGATGCA+AGG - chr1_4:54121965-54121984 None:intergenic 35.0%
AGTAGACATGTACAATCTCT+TGG + chr1_4:54122079-54122098 Msa0170200:intron 35.0%
TAGGTTACAGTAGAGACTAT+TGG - chr1_4:54122156-54122175 None:intergenic 35.0%
GTACATCACCATTAGCATTA+CGG - chr1_4:54122374-54122393 None:intergenic 35.0%
TGTACAAATTGCAACTAGAG+AGG + chr1_4:54122389-54122408 Msa0170200:CDS 35.0%
!!! CAATTGGCTTATTTTAGGGT+AGG - chr1_4:54122682-54122701 None:intergenic 35.0%
!! GTCTGCAATTGGCTTATTTT+AGG - chr1_4:54122687-54122706 None:intergenic 35.0%
TTGAAGAACTTGTCTGCAAT+TGG - chr1_4:54122698-54122717 None:intergenic 35.0%
TGAAAATATGCCGGGAAAAT+TGG + chr1_4:54123164-54123183 Msa0170200:intron 35.0%
GAAAATATGCCGGGAAAATT+GGG + chr1_4:54123165-54123184 Msa0170200:intron 35.0%
! TATTGTCAACCCAATTTTCC+CGG - chr1_4:54123177-54123196 None:intergenic 35.0%
ATATTTAGCCATGCTATCCT+TGG + chr1_4:54123244-54123263 Msa0170200:intron 35.0%
AACATAATCCAAGGATAGCA+TGG - chr1_4:54123255-54123274 None:intergenic 35.0%
!! TCATTCTTTGAAATGGAAGC+AGG - chr1_4:54123483-54123502 None:intergenic 35.0%
GACATAACAAACAGGTGATT+TGG + chr1_4:54123773-54123792 Msa0170200:intron 35.0%
TAGTACCATGCCAGAAAAAT+TGG + chr1_4:54123805-54123824 Msa0170200:intron 35.0%
! ACTGATGTGTCCAATTTTTC+TGG - chr1_4:54123818-54123837 None:intergenic 35.0%
!! GCGAAGTATTTTCAGAAGAA+TGG + chr1_4:54123906-54123925 Msa0170200:CDS 35.0%
! ACAGACTCTATTGATTATCC+TGG + chr1_4:54124006-54124025 Msa0170200:CDS 35.0%
AATCATGTCTCATGATAGCA+TGG + chr1_4:54124036-54124055 Msa0170200:CDS 35.0%
AGCAGGAAAAAAGAGTTAAG+AGG - chr1_4:54124130-54124149 None:intergenic 35.0%
!!! GTCATTTTTTCCTGTCAAGA+GGG - chr1_4:54124167-54124186 None:intergenic 35.0%
!!! AGTCATTTTTTCCTGTCAAG+AGG - chr1_4:54124168-54124187 None:intergenic 35.0%
CAGAGAAAATATATGGTTGC+GGG - chr1_4:54124249-54124268 None:intergenic 35.0%
GCAGAGAAAATATATGGTTG+CGG - chr1_4:54124250-54124269 None:intergenic 35.0%
!! GTCTTACCAGAAAAAGTGTT+TGG + chr1_4:54124287-54124306 Msa0170200:CDS 35.0%
TCAAGGATTGAAGAAAAGCA+GGG - chr1_4:54124398-54124417 None:intergenic 35.0%
ATCAAGGATTGAAGAAAAGC+AGG - chr1_4:54124399-54124418 None:intergenic 35.0%
! CAATCCTTGATTTTCATGCT+TGG + chr1_4:54124408-54124427 Msa0170200:intron 35.0%
TGATGTGGAGAAATTACTGA+AGG + chr1_4:54124615-54124634 Msa0170200:CDS 35.0%
AGAATTACTTCCACTCATGT+AGG - chr1_4:54124680-54124699 None:intergenic 35.0%
! CGACTATTTTGCAGAACTTT+GGG + chr1_4:54124876-54124895 Msa0170200:intron 35.0%
TGTTCACTTCCTTAGTTTCA+AGG + chr1_4:54124937-54124956 Msa0170200:CDS 35.0%
! GTTTCCTTTTATGAACAGAG+AGG + chr1_4:54125086-54125105 Msa0170200:CDS 35.0%
!! AATGTTTCTGGAGTTGTTTC+TGG + chr1_4:54125130-54125149 Msa0170200:CDS 35.0%
TTCAAACTAGAATCAGGAGA+AGG + chr1_4:54125197-54125216 Msa0170200:CDS 35.0%
TATATTGGGCAAAGTCTTGA+TGG + chr1_4:54125301-54125320 Msa0170200:intron 35.0%
!! ATGAAATGTGATGGATTGCA+TGG + chr1_4:54125437-54125456 Msa0170200:intron 35.0%
! GTTTTGCTTACAATAGTGAC+CGG - chr1_4:54125480-54125499 None:intergenic 35.0%
CATTGAATAAGTGATGTACG+TGG - chr1_4:54125554-54125573 None:intergenic 35.0%
! TTTAGCAAGGTACTCATCTT+TGG + chr1_4:54125622-54125641 Msa0170200:intron 35.0%
CTAATATTGCAGAGTCAACT+CGG + chr1_4:54125897-54125916 Msa0170200:intron 35.0%
ATGCTCTTGAAGTATATCGA+AGG - chr1_4:54126062-54126081 None:intergenic 35.0%
ATATCCTAAATCCAATGTCC+TGG - chr1_4:54126237-54126256 None:intergenic 35.0%
TATAGTAGATCCAATGGCAT+AGG - chr1_4:54126334-54126353 None:intergenic 35.0%
TGTTTGATGAATCGTCATCA+AGG - chr1_4:54126637-54126656 None:intergenic 35.0%
ATCAAACAACTCCTTGAAAG+TGG + chr1_4:54126649-54126668 Msa0170200:CDS 35.0%
ATCCTTAGAGGACTTTATCA+CGG - chr1_4:54126873-54126892 None:intergenic 35.0%
! GATAAAGTCCTCTAAGGATT+TGG + chr1_4:54126874-54126893 Msa0170200:CDS 35.0%
! TTTTCGTTCCAAATCCTTAG+AGG - chr1_4:54126885-54126904 None:intergenic 35.0%
ACAAGAACAGAAACAAGATG+GGG - chr1_4:54126938-54126957 None:intergenic 35.0%
!! TTCTGTTCTTGTTACTTTGG+AGG + chr1_4:54126946-54126965 Msa0170200:CDS 35.0%
TCTATTCCTGAGACAAATTC+TGG - chr1_4:54127043-54127062 None:intergenic 35.0%
TTGCGGAAAAAATTCCAGTA+AGG + chr1_4:54127104-54127123 Msa0170200:intron 35.0%
! ATACTTTTAGCAAGCCTTAC+TGG - chr1_4:54127121-54127140 None:intergenic 35.0%
AAGTATGTATTGTTGGATGG+AGG + chr1_4:54127135-54127154 Msa0170200:intron 35.0%
! GGGTATATTTCTAACAATGG+CGG - chr1_4:54127227-54127246 None:intergenic 35.0%
GGCAACATTTATTGGTACAA+TGG + chr1_4:54127298-54127317 Msa0170200:CDS 35.0%
AATGGACAGATCATCTATTG+TGG + chr1_4:54127316-54127335 Msa0170200:CDS 35.0%
TACCATGCCATAGAAAGATA+TGG - chr1_4:54127558-54127577 None:intergenic 35.0%
AAATAAGCGTGTGCTTTATG+AGG + chr1_4:54127651-54127670 Msa0170200:intron 35.0%
AGTAACTGTGTTCATCATCT+TGG + chr1_4:54127964-54127983 Msa0170200:CDS 35.0%
TTCGAGTCAGAAGAAAAAGA+AGG + chr1_4:54128014-54128033 Msa0170200:CDS 35.0%
AACAGATATCTTGTCTGTCA+AGG + chr1_4:54128068-54128087 Msa0170200:CDS 35.0%
ACAGATATCTTGTCTGTCAA+GGG + chr1_4:54128069-54128088 Msa0170200:CDS 35.0%
ATAGAGGAAACACTTGTGTA+AGG - chr1_4:54128124-54128143 None:intergenic 35.0%
TCTTGACTCATCAAATTTCC+AGG + chr1_4:54128164-54128183 Msa0170200:intron 35.0%
AGTGGAAAAATATACTAGCC+TGG - chr1_4:54128185-54128204 None:intergenic 35.0%
AAGACACGAGCTAGAATATT+GGG + chr1_4:54128782-54128801 Msa0170200:CDS 35.0%
TTCAGTTAAATCTCTTGCAC+AGG + chr1_4:54128910-54128929 Msa0170200:CDS 35.0%
AGGAAATAGAGTCTTTGAGT+GGG + chr1_4:54128942-54128961 Msa0170200:CDS 35.0%
CTCAACGAATCTAACATCAT+AGG - chr1_4:54128985-54129004 None:intergenic 35.0%
AATGCCACCTTTCCTTTAAA+TGG - chr1_4:54129065-54129084 None:intergenic 35.0%
! GGATTCACGCTTTTAATGAT+CGG - chr1_4:54129166-54129185 None:intergenic 35.0%
! CGTGTTCTTCTTCTTCGTTT+TGG - chr1_4:54111290-54111309 None:intergenic 40.0%
AAACGAAGAAGAAGAACACG+AGG + chr1_4:54111290-54111309 Msa0170200:five_prime_UTR 40.0%
! AAGTTAGGGTTAGGGTTTTG+TGG - chr1_4:54111316-54111335 None:intergenic 40.0%
TCTAGCAATGGCAAATTCCT+TGG + chr1_4:54111361-54111380 Msa0170200:exon 40.0%
AGCTTGTAATTGAGAAGCCA+AGG - chr1_4:54111381-54111400 None:intergenic 40.0%
AAGATAGAAGGACGAGTGAA+CGG - chr1_4:54111446-54111465 None:intergenic 40.0%
GGATTCAGTACTCTTATCAG+CGG - chr1_4:54111486-54111505 None:intergenic 40.0%
!! TTCTGATTAGCACCGATGAA+AGG + chr1_4:54111666-54111685 Msa0170200:CDS 40.0%
!! TTAGCACCGATGAAAGGTTT+AGG + chr1_4:54111672-54111691 Msa0170200:CDS 40.0%
GATACATGAGCACAATGTTG+AGG + chr1_4:54111963-54111982 Msa0170200:CDS 40.0%
! CTTAAAGGTGTGAAAGACTC+GGG + chr1_4:54112164-54112183 Msa0170200:CDS 40.0%
TGCTGCACTATAACCATTCT+AGG - chr1_4:54112200-54112219 None:intergenic 40.0%
!!! TTGTTGAAGTTTTGGGTGTG+AGG + chr1_4:54112394-54112413 Msa0170200:CDS 40.0%
!!! TGTTGAAGTTTTGGGTGTGA+GGG + chr1_4:54112395-54112414 Msa0170200:CDS 40.0%
TGAAGACCAGAATTCACGAA+AGG - chr1_4:54112450-54112469 None:intergenic 40.0%
GAAGGATCTTTCAGATCACA+AGG + chr1_4:54112479-54112498 Msa0170200:CDS 40.0%
AAATGGATCTTGACATGAGG+GGG - chr1_4:54112618-54112637 None:intergenic 40.0%
CATATCCAGCTATGTGGATT+TGG - chr1_4:54112845-54112864 None:intergenic 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG - chr1_4:54113073-54113092 None:intergenic 40.0%
!! GTTGGTTTGTGGTCTTTGTT+TGG - chr1_4:54113163-54113182 None:intergenic 40.0%
TTGCAAACTTCCCATTAGGA+AGG + chr1_4:54113330-54113349 Msa0170200:intron 40.0%
! AATCAACTGGCTCAAAAGGT+TGG - chr1_4:54113466-54113485 None:intergenic 40.0%
! CCTTTTGAGCCAGTTGATTA+CGG + chr1_4:54113467-54113486 Msa0170200:intron 40.0%
! CTTTTGAGCCAGTTGATTAC+GGG + chr1_4:54113468-54113487 Msa0170200:intron 40.0%
! TTTTGAGCCAGTTGATTACG+GGG + chr1_4:54113469-54113488 Msa0170200:intron 40.0%
AGGAGGCTAAAGATCTTCAT+TGG + chr1_4:54113812-54113831 Msa0170200:CDS 40.0%
TGCCTTAATCAATCTTGTCC+AGG + chr1_4:54113852-54113871 Msa0170200:CDS 40.0%
TTCTGTAACAGCATAGTACC+TGG - chr1_4:54113873-54113892 None:intergenic 40.0%
!!! TGTGTCAACATTTTGGGACT+AGG - chr1_4:54114004-54114023 None:intergenic 40.0%
ATGGCAACAGCGAAATTACA+AGG - chr1_4:54114100-54114119 None:intergenic 40.0%
TTCTTATAGGGATTTGCCTG+GGG + chr1_4:54114159-54114178 Msa0170200:intron 40.0%
! TATGGGGACCTTTTCTATCA+AGG - chr1_4:54114384-54114403 None:intergenic 40.0%
!! CACACAAGTTGATAGGATCT+TGG - chr1_4:54114432-54114451 None:intergenic 40.0%
TTAATGCAATAGTTGCAGCC+TGG + chr1_4:54114670-54114689 Msa0170200:intron 40.0%
TCAAATGTCAATTAGCTGGC+TGG + chr1_4:54114744-54114763 Msa0170200:intron 40.0%
CAAATGTCAATTAGCTGGCT+GGG + chr1_4:54114745-54114764 Msa0170200:intron 40.0%
GAAAATGATGAACTGCTGCA+CGG - chr1_4:54114817-54114836 None:intergenic 40.0%
!! GTTTGGCTTGTATCATCCAA+AGG + chr1_4:54115039-54115058 Msa0170200:CDS 40.0%
TTCGGGCATCTTGAAAAACA+AGG + chr1_4:54115225-54115244 Msa0170200:CDS 40.0%
ATTCCACATAATCGTTGGGT+TGG + chr1_4:54115648-54115667 Msa0170200:intron 40.0%
TTCCACATAATCGTTGGGTT+GGG + chr1_4:54115649-54115668 Msa0170200:intron 40.0%
! GATTTGGAGGTGTACAAAGT+CGG + chr1_4:54115698-54115717 Msa0170200:intron 40.0%
! ATTTGGAGGTGTACAAAGTC+GGG + chr1_4:54115699-54115718 Msa0170200:intron 40.0%
AAGCCATTCCACATAATCGT+TGG + chr1_4:54116048-54116067 Msa0170200:intron 40.0%
AGCCATTCCACATAATCGTT+GGG + chr1_4:54116049-54116068 Msa0170200:intron 40.0%
AACCCAACGATTATGTGGAA+TGG - chr1_4:54115649-54115668 None:intergenic 40.0%
ATTCCACATAATCGTTGGGT+TGG + chr1_4:54115648-54115667 Msa0170200:intron 40.0%
TTCCACATAATCGTTGGGTT+GGG + chr1_4:54115649-54115668 Msa0170200:intron 40.0%
!! GAGCTGATTTGAAGTTGACA+TGG + chr1_4:54116259-54116278 Msa0170200:intron 40.0%
!! GCTGATTTGAAGTTGACATG+GGG + chr1_4:54116261-54116280 Msa0170200:intron 40.0%
! GGTCAAAGCTTTAGTTGTGT+TGG + chr1_4:54116299-54116318 Msa0170200:intron 40.0%
! AAAGCTTTAGTTGTGTTGGG+TGG + chr1_4:54116303-54116322 Msa0170200:intron 40.0%
!! CAAGCAGCTTTAAATGTCGA+TGG + chr1_4:54116552-54116571 Msa0170200:CDS 40.0%
!! AGCTTTAAATGTCGATGGCT+TGG + chr1_4:54116557-54116576 Msa0170200:CDS 40.0%
TCGAGAAGCTTAGAAGAATC+TGG - chr1_4:54116591-54116610 None:intergenic 40.0%
AGATTCTTCTAAGCTTCTCG+AGG + chr1_4:54116590-54116609 Msa0170200:CDS 40.0%
TCCAAAGTGAATATGGTGAC+TGG + chr1_4:54116753-54116772 Msa0170200:intron 40.0%
ACCAGTCACCATATTCACTT+TGG - chr1_4:54116757-54116776 None:intergenic 40.0%
! ATTGACTTCTGATCAGCTGT+TGG + chr1_4:54116841-54116860 Msa0170200:intron 40.0%
TTGACTTCTGATCAGCTGTT+GGG + chr1_4:54116842-54116861 Msa0170200:intron 40.0%
TCTTGTTGGATGATACCTGT+TGG + chr1_4:54116892-54116911 Msa0170200:intron 40.0%
! TTGGATGATACCTGTTGGTT+TGG + chr1_4:54116897-54116916 Msa0170200:intron 40.0%
CATGACTATACCAAACCAAC+AGG - chr1_4:54116910-54116929 None:intergenic 40.0%
!! CTGTTGGTTTGGTATAGTCA+TGG + chr1_4:54116908-54116927 Msa0170200:intron 40.0%
AGGTAGTGCCTTCATTAGAA+TGG + chr1_4:54117301-54117320 Msa0170200:intron 40.0%
!! ACCGATAATGTTAGTCTTGC+TGG + chr1_4:54117700-54117719 Msa0170200:intron 40.0%
!! TGCTTTCCAAGTACTGATCA+TGG - chr1_4:54117768-54117787 None:intergenic 40.0%
AAGTAAGAACACGCAAAGTC+GGG - chr1_4:54117857-54117876 None:intergenic 40.0%
ACTTCTCTTATTGCAGACAC+AGG + chr1_4:54117929-54117948 Msa0170200:intron 40.0%
AGATACTTGTGGTACTAGAC+GGG - chr1_4:54118340-54118359 None:intergenic 40.0%
!! GAATGCTGGTGATGTTCTTT+TGG + chr1_4:54118845-54118864 Msa0170200:CDS 40.0%
! ATGTTCTTTTGGACGAGGTA+CGG + chr1_4:54118856-54118875 Msa0170200:intron 40.0%
TGGCATACAAAAGCTGATCA+AGG - chr1_4:54119017-54119036 None:intergenic 40.0%
! CAGCTTTTGTATGCCAAACT+CGG + chr1_4:54119021-54119040 Msa0170200:CDS 40.0%
CTAGTGCCAGATAAATCATC+AGG + chr1_4:54119096-54119115 Msa0170200:CDS 40.0%
AAAGGTTCATTCGTGCAACT+AGG - chr1_4:54119400-54119419 None:intergenic 40.0%
GCAGGATGATAGCAAGATAA+AGG + chr1_4:54119428-54119447 Msa0170200:intron 40.0%
!! CTAAGAAATGGAGGTGTTCA+TGG - chr1_4:54119497-54119516 None:intergenic 40.0%
! TGAACTGTGCTGCTAAGAAA+TGG - chr1_4:54119509-54119528 None:intergenic 40.0%
TATGGAGTACATCAAGCAAC+GGG - chr1_4:54119588-54119607 None:intergenic 40.0%
TACAAAGAGATCCATAGCAC+TGG - chr1_4:54119894-54119913 None:intergenic 40.0%
CTTTGTACTCTGCAGCAAAA+TGG + chr1_4:54119907-54119926 Msa0170200:CDS 40.0%
TCCTTCTCTTCTTGTTCCAT+TGG + chr1_4:54119957-54119976 Msa0170200:CDS 40.0%
TGTTAAGTTACACGCTTTGC+GGG + chr1_4:54120206-54120225 Msa0170200:CDS 40.0%
CTTCCTAAACTGGTTACAAC+AGG + chr1_4:54120310-54120329 Msa0170200:intron 40.0%
AACCCTGTTGTAACCAGTTT+AGG - chr1_4:54120316-54120335 None:intergenic 40.0%
GGAAGAACTTCTAATTGCGT+TGG + chr1_4:54120345-54120364 Msa0170200:CDS 40.0%
ATATTATGATAGGACGAGCC+CGG - chr1_4:54120445-54120464 None:intergenic 40.0%
TGCTTAGCTGCTTCTGTTAT+TGG + chr1_4:54120567-54120586 Msa0170200:intron 40.0%
CAAATGTGTAGAGGGGAATT+TGG + chr1_4:54120606-54120625 Msa0170200:intron 40.0%
TTGACATAGATTGTGTGTCC+TGG + chr1_4:54120668-54120687 Msa0170200:intron 40.0%
TAGGGTTTAGGGATATTCTG+TGG + chr1_4:54120741-54120760 Msa0170200:intron 40.0%
!! TTTTGGTGTGGCATTTCTTC+CGG - chr1_4:54121156-54121175 None:intergenic 40.0%
!!! GGGGATACATTTTTTTGGTG+TGG - chr1_4:54121168-54121187 None:intergenic 40.0%
ACTGGGAAATTCTCCAACTA+CGG + chr1_4:54121320-54121339 Msa0170200:CDS 40.0%
TTTCCTTGCTCAAGGGAATT+GGG + chr1_4:54121550-54121569 Msa0170200:CDS 40.0%
! GATACTGTGTCTTTTGTTGG+AGG + chr1_4:54121668-54121687 Msa0170200:CDS 40.0%
CTGATGAAACTTCCAATCTG+AGG + chr1_4:54121720-54121739 Msa0170200:intron 40.0%
! GAAACTTCCAATCTGAGGTT+TGG + chr1_4:54121725-54121744 Msa0170200:intron 40.0%
CACAGTTCTACATGGAGAAA+AGG - chr1_4:54121761-54121780 None:intergenic 40.0%
TGTGTAATGTCTTCTTCAGG+TGG + chr1_4:54121777-54121796 Msa0170200:CDS 40.0%
!! CTCTTTACAGAAAGTGTTGC+AGG + chr1_4:54121815-54121834 Msa0170200:CDS 40.0%
TAGGTCACAGTAGAGACTAT+TGG - chr1_4:54122292-54122311 None:intergenic 40.0%
TTTCTGTGCCGTAATGCTAA+TGG + chr1_4:54122363-54122382 Msa0170200:CDS 40.0%
ACTCACATTTATGCGCATCA+AGG - chr1_4:54122415-54122434 None:intergenic 40.0%
TTCTTCAACCAATGCCCTTA+GGG + chr1_4:54122710-54122729 Msa0170200:intron 40.0%
CTTAGGACATCTCTCTTTCA+AGG - chr1_4:54122982-54123001 None:intergenic 40.0%
ATGTCCTAAGCACTAGATGA+TGG + chr1_4:54122992-54123011 Msa0170200:intron 40.0%
GCAGTGAAAGACTTAAGAGA+CGG + chr1_4:54123024-54123043 Msa0170200:intron 40.0%
!! TTGGACATTGCCTGTTTTTC+TGG + chr1_4:54123285-54123304 Msa0170200:intron 40.0%
CAAGTATGAGGTCAAGTATG+CGG - chr1_4:54123607-54123626 None:intergenic 40.0%
CACCAAAGTGTGGCAAAATT+AGG + chr1_4:54123627-54123646 Msa0170200:CDS 40.0%
! GACCTAATTTTGCCACACTT+TGG - chr1_4:54123632-54123651 None:intergenic 40.0%
!! TGTGTCCAATTTTTCTGGCA+TGG - chr1_4:54123813-54123832 None:intergenic 40.0%
AAATGACACACTTTCCCTTG+AGG + chr1_4:54123931-54123950 Msa0170200:CDS 40.0%
ACAGTTTCGGAAAGACTTGA+CGG - chr1_4:54123974-54123993 None:intergenic 40.0%
! GACTCTATTGATTATCCTGG+AGG + chr1_4:54124009-54124028 Msa0170200:CDS 40.0%
GAGACATGATTATATCCTCC+AGG - chr1_4:54124027-54124046 None:intergenic 40.0%
TGACAACAACATCAGTAGTC+CGG - chr1_4:54124226-54124245 None:intergenic 40.0%
!!! AGATGCCCAAACACTTTTTC+TGG - chr1_4:54124296-54124315 None:intergenic 40.0%
! ACAGCTGATTCTCCAATAAC+TGG - chr1_4:54124332-54124351 None:intergenic 40.0%
AAGCAGGGAAACCAAAAGAT+GGG - chr1_4:54124383-54124402 None:intergenic 40.0%
AAAGCAGGGAAACCAAAAGA+TGG - chr1_4:54124384-54124403 None:intergenic 40.0%
AACACATAAGTGGAGATGCA+TGG - chr1_4:54124508-54124527 None:intergenic 40.0%
TATCTGCGATTGTTCCTTGT+TGG + chr1_4:54124578-54124597 Msa0170200:CDS 40.0%
GTGGAGAAATTACTGAAGGT+TGG + chr1_4:54124619-54124638 Msa0170200:intron 40.0%
CTTCTGTGCTCAACAATTTC+AGG - chr1_4:54124761-54124780 None:intergenic 40.0%
CTGAAATTGTTGAGCACAGA+AGG + chr1_4:54124759-54124778 Msa0170200:CDS 40.0%
! GCGACTATTTTGCAGAACTT+TGG + chr1_4:54124875-54124894 Msa0170200:intron 40.0%
! ATTTTGCAGAACTTTGGGTG+AGG + chr1_4:54124881-54124900 Msa0170200:intron 40.0%
! TTTTGCAGAACTTTGGGTGA+GGG + chr1_4:54124882-54124901 Msa0170200:intron 40.0%
CTCAATATTGAGGAAACAGG+TGG - chr1_4:54124967-54124986 None:intergenic 40.0%
CGTCTCAATATTGAGGAAAC+AGG - chr1_4:54124970-54124989 None:intergenic 40.0%
TGTTGACCAGTCAATGTTTC+TGG + chr1_4:54125118-54125137 Msa0170200:CDS 40.0%
ACAACTCCAGAAACATTGAC+TGG - chr1_4:54125127-54125146 None:intergenic 40.0%
GAATGACCACTGCAAAGTAA+CGG + chr1_4:54125361-54125380 Msa0170200:intron 40.0%
CAAAGTAACGGTAGTAGATG+TGG + chr1_4:54125373-54125392 Msa0170200:intron 40.0%
TGGCTTATAATAGTGACCAG+AGG + chr1_4:54125592-54125611 Msa0170200:intron 40.0%
TTGCATCTACAAGATGCAAG+AGG - chr1_4:54125947-54125966 None:intergenic 40.0%
CATTGTGAGGAAAGAGTTGA+AGG + chr1_4:54125992-54126011 Msa0170200:CDS 40.0%
ACTAGGACGAGAATAAAGAC+AGG - chr1_4:54126206-54126225 None:intergenic 40.0%
! ATGTCCTGGTGTCTAAAACT+AGG - chr1_4:54126223-54126242 None:intergenic 40.0%
!!! AGTTTTAGACACCAGGACAT+TGG + chr1_4:54126223-54126242 Msa0170200:intron 40.0%
TTAACGCCTAAAGGCAACAA+AGG + chr1_4:54126521-54126540 Msa0170200:CDS 40.0%
CTTGAACCTTTGTTGCCTTT+AGG - chr1_4:54126530-54126549 None:intergenic 40.0%
GATCAAGATCAAGTTCTCGT+TGG + chr1_4:54126549-54126568 Msa0170200:CDS 40.0%
!! AAGTTCTCGTTGGCTTCAAT+TGG + chr1_4:54126559-54126578 Msa0170200:CDS 40.0%
AAGAACTTTGATCAACGCAG+CGG - chr1_4:54126813-54126832 None:intergenic 40.0%
! TCAAGTTTCGACAGTGCTTT+TGG - chr1_4:54126839-54126858 None:intergenic 40.0%
TGGATTACGAAAGCTTCTTG+CGG + chr1_4:54127087-54127106 Msa0170200:CDS 40.0%
! TATTTCTAACAATGGCGGCA+GGG - chr1_4:54127222-54127241 None:intergenic 40.0%
! ATATTTCTAACAATGGCGGC+AGG - chr1_4:54127223-54127242 None:intergenic 40.0%
AATATACCCAACTGCTGTTG+AGG + chr1_4:54127238-54127257 Msa0170200:CDS 40.0%
TCATCTATTGTGGCATTCCA+TGG + chr1_4:54127326-54127345 Msa0170200:CDS 40.0%
CATGCTCTCTGTAAGCTTTA+GGG - chr1_4:54127462-54127481 None:intergenic 40.0%
ACATGCTCTCTGTAAGCTTT+AGG - chr1_4:54127463-54127482 None:intergenic 40.0%
GTCGATGAAACTGTATCTTC+AGG + chr1_4:54127518-54127537 Msa0170200:CDS 40.0%
AACTGTATCTTCAGGAAGCA+TGG + chr1_4:54127526-54127545 Msa0170200:CDS 40.0%
! TATCTTCAGGAAGCATGGAT+AGG + chr1_4:54127531-54127550 Msa0170200:CDS 40.0%
! ATCTTCAGGAAGCATGGATA+GGG + chr1_4:54127532-54127551 Msa0170200:CDS 40.0%
GATAGGGCCATATCTTTCTA+TGG + chr1_4:54127548-54127567 Msa0170200:CDS 40.0%
!! ATAAGCTTGCTGAGAACCAT+CGG + chr1_4:54127579-54127598 Msa0170200:CDS 40.0%
ATTAGGCAATGACTTACCGA+TGG - chr1_4:54127598-54127617 None:intergenic 40.0%
AAGTGTTTCCTCTATGACAC+CGG + chr1_4:54128129-54128148 Msa0170200:intron 40.0%
TCACGCTAGGTATATTCATG+TGG - chr1_4:54128528-54128547 None:intergenic 40.0%
CATGAATATACCTAGCGTGA+CGG + chr1_4:54128528-54128547 Msa0170200:CDS 40.0%
!! GACCTACTTGTTGTTTGCAT+CGG + chr1_4:54128559-54128578 Msa0170200:CDS 40.0%
! TGTTGTTTGCATCGGTCAAA+TGG + chr1_4:54128567-54128586 Msa0170200:CDS 40.0%
AATTATACTTCGCGGTTCAG+AGG - chr1_4:54128625-54128644 None:intergenic 40.0%
!! TATTCTAGCTCGTGTCTTCT+CGG - chr1_4:54128780-54128799 None:intergenic 40.0%
GAAGACACGAGCTAGAATAT+TGG + chr1_4:54128781-54128800 Msa0170200:CDS 40.0%
CAGGAAATAGAGTCTTTGAG+TGG + chr1_4:54128941-54128960 Msa0170200:CDS 40.0%
GGAAATAGAGTCTTTGAGTG+GGG + chr1_4:54128943-54128962 Msa0170200:CDS 40.0%
AACATCATAGGTAGTCTCGA+AGG - chr1_4:54128973-54128992 None:intergenic 40.0%
ATGGCCATTTAAAGGAAAGG+TGG + chr1_4:54129058-54129077 Msa0170200:three_prime_UTR 40.0%
! CTTTTAATGATCGGCACTTG+TGG - chr1_4:54129157-54129176 None:intergenic 40.0%
AAGAGGAAAGAGAAGCTGCA+AGG - chr1_4:54111250-54111269 None:intergenic 45.0%
TGCGGAATCAGTAAGTGCTA+TGG - chr1_4:54111411-54111430 None:intergenic 45.0%
CTCTTATCAGCGGCTTCTTT+AGG - chr1_4:54111476-54111495 None:intergenic 45.0%
TTGAGCAGCGATGGTGTAAA+TGG - chr1_4:54111507-54111526 None:intergenic 45.0%
ATTTACACCATCGCTGCTCA+AGG + chr1_4:54111506-54111525 Msa0170200:CDS 45.0%
TGGTTGTGTTTCAGGATTGG+AGG + chr1_4:54111643-54111662 Msa0170200:intron 45.0%
CAGTCCCCAGAGTAAAGAAT+TGG + chr1_4:54111715-54111734 Msa0170200:CDS 45.0%
AATGCATGTGTGTCGTGGTA+CGG - chr1_4:54112009-54112028 None:intergenic 45.0%
GAACAAATGCATGTGTGTCG+TGG - chr1_4:54112014-54112033 None:intergenic 45.0%
CAGCAATGTCTTCGTGATTG+TGG + chr1_4:54112215-54112234 Msa0170200:CDS 45.0%
TGGTCTTCAGCCTGATAAGA+AGG + chr1_4:54112461-54112480 Msa0170200:CDS 45.0%
TCTTGACATGAGGGGGTAAA+AGG - chr1_4:54112611-54112630 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG + chr1_4:54113012-54113031 Msa0170200:intron 45.0%
CTGCTTGCAAACTTCCCATT+AGG + chr1_4:54113326-54113345 Msa0170200:intron 45.0%
ATAGGGAGGGAGTTGTGAAA+AGG + chr1_4:54113423-54113442 Msa0170200:intron 45.0%
TAGGGAGGGAGTTGTGAAAA+GGG + chr1_4:54113424-54113443 Msa0170200:intron 45.0%
! CCGTAATCAACTGGCTCAAA+AGG - chr1_4:54113470-54113489 None:intergenic 45.0%
GACAATAGTGCAACAGAAGG+TGG - chr1_4:54113679-54113698 None:intergenic 45.0%
GGTTTGATACGTTCAGTTGC+CGG + chr1_4:54113772-54113791 Msa0170200:CDS 45.0%
GTTTGATACGTTCAGTTGCC+GGG + chr1_4:54113773-54113792 Msa0170200:CDS 45.0%
TGTTGACACACTTCCAACGA+AGG + chr1_4:54114014-54114033 Msa0170200:CDS 45.0%
AAAACATCCAAGGCCTTCGT+TGG - chr1_4:54114030-54114049 None:intergenic 45.0%
TGGACTCCCTAATTATCTGC+AGG + chr1_4:54114236-54114255 Msa0170200:CDS 45.0%
GACTCAACATCTTCGATGTC+AGG + chr1_4:54114473-54114492 Msa0170200:CDS 45.0%
AAGAACTGAGCTGTGTACAG+CGG - chr1_4:54114627-54114646 None:intergenic 45.0%
AAGTCAGTGTGTGGTACCTT+TGG - chr1_4:54115058-54115077 None:intergenic 45.0%
ATCCCCGACTGTTATCCTAT+GGG + chr1_4:54115352-54115371 Msa0170200:intron 45.0%
TCAGCCCATAGGATAACAGT+CGG - chr1_4:54115359-54115378 None:intergenic 45.0%
! TCCACATAATCGTTGGGTTG+GGG + chr1_4:54115650-54115669 Msa0170200:intron 45.0%
! TTTGGAGGTGTACAAAGTCG+GGG + chr1_4:54115700-54115719 Msa0170200:intron 45.0%
! TCCACATAATCGTTGGGTTG+GGG + chr1_4:54115650-54115669 Msa0170200:intron 45.0%
GTACAAAGTAGGGGTGGTTA+TGG + chr1_4:54116114-54116133 Msa0170200:intron 45.0%
ACTGTCTCAATATGGCCTCT+GGG - chr1_4:54116506-54116525 None:intergenic 45.0%
AACTGTCTCAATATGGCCTC+TGG - chr1_4:54116507-54116526 None:intergenic 45.0%
TTCTCGGAATGCACTCTTGT+TGG + chr1_4:54116878-54116897 Msa0170200:intron 45.0%
AGCTTAACTAGATTGGGCCT+TGG - chr1_4:54117424-54117443 None:intergenic 45.0%
GGCAGGCCCAGTATATATTT+AGG - chr1_4:54117632-54117651 None:intergenic 45.0%
TGTGGCATAGCAAGGAGTAA+TGG - chr1_4:54117808-54117827 None:intergenic 45.0%
! ATTACTCCTTGCTATGCCAC+AGG + chr1_4:54117807-54117826 Msa0170200:CDS 45.0%
TTTCAACCTGTGGCATAGCA+AGG - chr1_4:54117816-54117835 None:intergenic 45.0%
GATACTTGTGGTACTAGACG+GGG - chr1_4:54118339-54118358 None:intergenic 45.0%
! TTCCTATTCTGAAGGCTGAG+TGG + chr1_4:54118811-54118830 Msa0170200:CDS 45.0%
! TCCTATTCTGAAGGCTGAGT+GGG + chr1_4:54118812-54118831 Msa0170200:CDS 45.0%
TGGGAATCTTCAGTGAATGC+TGG + chr1_4:54118831-54118850 Msa0170200:CDS 45.0%
!! TGGTGATGTTCTTTTGGACG+AGG + chr1_4:54118851-54118870 Msa0170200:CDS 45.0%
! TGTTCTTTTGGACGAGGTAC+GGG + chr1_4:54118857-54118876 Msa0170200:intron 45.0%
! TACGGGGATTTGGTCTCATA+TGG + chr1_4:54118874-54118893 Msa0170200:intron 45.0%
TGCATTTAGAGGTCCGAGTT+TGG - chr1_4:54119037-54119056 None:intergenic 45.0%
! ACTGTGCTGCTAAGAAATGG+AGG - chr1_4:54119506-54119525 None:intergenic 45.0%
ATGGAGTACATCAAGCAACG+GGG - chr1_4:54119587-54119606 None:intergenic 45.0%
CTTTCAACTTGGACTACAGC+AGG - chr1_4:54119868-54119887 None:intergenic 45.0%
! AGCACTGGAGACTTTCAACT+TGG - chr1_4:54119879-54119898 None:intergenic 45.0%
GTTGAAAGTCTCCAGTGCTA+TGG + chr1_4:54119880-54119899 Msa0170200:CDS 45.0%
GCCAATGGAACAAGAAGAGA+AGG - chr1_4:54119961-54119980 None:intergenic 45.0%
TCTCTTCTTGTTCCATTGGC+CGG + chr1_4:54119961-54119980 Msa0170200:CDS 45.0%
GTTAAGTTACACGCTTTGCG+GGG + chr1_4:54120207-54120226 Msa0170200:CDS 45.0%
TACAACAGGGTTCCAGTTTC+TGG + chr1_4:54120324-54120343 Msa0170200:intron 45.0%
TGTGTAGAGGGGAATTTGGA+TGG + chr1_4:54120610-54120629 Msa0170200:intron 45.0%
GTGTAGAGGGGAATTTGGAT+GGG + chr1_4:54120611-54120630 Msa0170200:intron 45.0%
CTGGGAAATTCTCCAACTAC+GGG + chr1_4:54121321-54121340 Msa0170200:CDS 45.0%
GAAATTCTCCAACTACGGGA+AGG + chr1_4:54121325-54121344 Msa0170200:CDS 45.0%
CTTTCCTTGCTCAAGGGAAT+TGG + chr1_4:54121549-54121568 Msa0170200:CDS 45.0%
TAGCTCACCAAACCTCAGAT+TGG - chr1_4:54121735-54121754 None:intergenic 45.0%
ACTGGAAAAGGCAATGACCA+AGG - chr1_4:54121904-54121923 None:intergenic 45.0%
! TGGTCATTGCCTTTTCCAGT+TGG + chr1_4:54121904-54121923 Msa0170200:intron 45.0%
! CATTGCCTTTTCCAGTTGGA+TGG + chr1_4:54121908-54121927 Msa0170200:intron 45.0%
TCATGCCATCCAACTGGAAA+AGG - chr1_4:54121916-54121935 None:intergenic 45.0%
TGCAAGGCTCTACATAAGCA+GGG - chr1_4:54121949-54121968 None:intergenic 45.0%
ATGCAAGGCTCTACATAAGC+AGG - chr1_4:54121950-54121969 None:intergenic 45.0%
!! ATACAAAACAGGCACCGAAG+AGG - chr1_4:54122503-54122522 None:intergenic 45.0%
GTTCTTCAACCAATGCCCTT+AGG + chr1_4:54122709-54122728 Msa0170200:intron 45.0%
! TACGTCGATTGTCACCCTAA+GGG - chr1_4:54122727-54122746 None:intergenic 45.0%
!! CTCTAGAGCTTGCTCATGAA+GGG + chr1_4:54122823-54122842 Msa0170200:intron 45.0%
TCTCTCTTTCAAGGAGGCAA+CGG - chr1_4:54122973-54122992 None:intergenic 45.0%
AGGACATCTCTCTTTCAAGG+AGG - chr1_4:54122979-54122998 None:intergenic 45.0%
! TCCTAAGCACTAGATGATGG+AGG + chr1_4:54122995-54123014 Msa0170200:intron 45.0%
!! CACTAGATGATGGAGGCATA+TGG + chr1_4:54123002-54123021 Msa0170200:intron 45.0%
TTCGTAGAGGAAGTCTGAGA+TGG + chr1_4:54123098-54123117 Msa0170200:intron 45.0%
! CACACTTTGGTGCAAGTATG+AGG - chr1_4:54123619-54123638 None:intergenic 45.0%
CTCATACTTGCACCAAAGTG+TGG + chr1_4:54123617-54123636 Msa0170200:CDS 45.0%
! AATTGCCGCTTGATTCTTGC+AGG + chr1_4:54123849-54123868 Msa0170200:intron 45.0%
GAATGCCTGCAAGAATCAAG+CGG - chr1_4:54123857-54123876 None:intergenic 45.0%
TTGGGATGATCCTTCCTCAA+GGG - chr1_4:54123948-54123967 None:intergenic 45.0%
AGCTACTGATAGAGTTTGCC+CGG + chr1_4:54124204-54124223 Msa0170200:CDS 45.0%
GACAACAACATCAGTAGTCC+GGG - chr1_4:54124225-54124244 None:intergenic 45.0%
AGCAGGGAAACCAAAAGATG+GGG - chr1_4:54124382-54124401 None:intergenic 45.0%
GGACCCAAGCATGAAAATCA+AGG - chr1_4:54124415-54124434 None:intergenic 45.0%
TCTGTCTTAGACAGCCAACA+AGG - chr1_4:54124595-54124614 None:intergenic 45.0%
! GCTGTCTAAGACAGATGATG+TGG + chr1_4:54124600-54124619 Msa0170200:CDS 45.0%
TCATGTCTCTCCTACATGAG+TGG + chr1_4:54124667-54124686 Msa0170200:intron 45.0%
GGGTGAGGGTAAAAAATGCT+TGG + chr1_4:54124896-54124915 Msa0170200:CDS 45.0%
GGTGGCTTTCCTTGAAACTA+AGG - chr1_4:54124949-54124968 None:intergenic 45.0%
CATCTGGCGTCTCAATATTG+AGG - chr1_4:54124977-54124996 None:intergenic 45.0%
AGAAGGCTCTCTTGTCATTC+AGG + chr1_4:54125214-54125233 Msa0170200:CDS 45.0%
! CTACTACCGTTACTTTGCAG+TGG - chr1_4:54125370-54125389 None:intergenic 45.0%
GGTGAAATTGTTACACCCTC+CGG + chr1_4:54125458-54125477 Msa0170200:intron 45.0%
TGCTTACAATAGTGACCGGA+GGG - chr1_4:54125476-54125495 None:intergenic 45.0%
TTGCTTACAATAGTGACCGG+AGG - chr1_4:54125477-54125496 None:intergenic 45.0%
CTTGCTAAAAGCTACACCTC+TGG - chr1_4:54125611-54125630 None:intergenic 45.0%
!! CAGAGGTGTAGCTTTTAGCA+AGG + chr1_4:54125609-54125628 Msa0170200:intron 45.0%
!!! TCGTCCTAGTTTTAGACACC+AGG + chr1_4:54126216-54126235 Msa0170200:intron 45.0%
GACACCAGGACATTGGATTT+AGG + chr1_4:54126230-54126249 Msa0170200:intron 45.0%
ACAGTCAGCTTAACGCCTAA+AGG + chr1_4:54126512-54126531 Msa0170200:CDS 45.0%
!! TGAAACTGCTGCCACTTTCA+AGG - chr1_4:54126663-54126682 None:intergenic 45.0%
ACGAAGGTGGAACTATTCGA+AGG - chr1_4:54126713-54126732 None:intergenic 45.0%
AGATTCAAGGCATGCAACGA+AGG - chr1_4:54126729-54126748 None:intergenic 45.0%
TCGAAGGCAACTAGAAGTCA+CGG - chr1_4:54126786-54126805 None:intergenic 45.0%
! GCTGCGTTGATCAAAGTTCT+TGG + chr1_4:54126812-54126831 Msa0170200:CDS 45.0%
GACCGTGATAAAGTCCTCTA+AGG + chr1_4:54126868-54126887 Msa0170200:CDS 45.0%
AACAAGATGGGGTGCATTTG+AGG - chr1_4:54126927-54126946 None:intergenic 45.0%
GAGGCAGTTGTTGTCAAACT+TGG + chr1_4:54126965-54126984 Msa0170200:CDS 45.0%
GCAGTTGTTGTCAAACTTGG+TGG + chr1_4:54126968-54126987 Msa0170200:CDS 45.0%
CTTCGTCCAGAATTTGTCTC+AGG + chr1_4:54127034-54127053 Msa0170200:CDS 45.0%
CTCAGGAATAGATGCCAAAG+TGG + chr1_4:54127051-54127070 Msa0170200:CDS 45.0%
CTTTCGTAATCCATGAGCAC+GGG - chr1_4:54127080-54127099 None:intergenic 45.0%
GCTTTCGTAATCCATGAGCA+CGG - chr1_4:54127081-54127100 None:intergenic 45.0%
CTATTGTGGCATTCCATGGA+AGG + chr1_4:54127330-54127349 Msa0170200:CDS 45.0%
GGCCATATCTTTCTATGGCA+TGG + chr1_4:54127553-54127572 Msa0170200:CDS 45.0%
TGTGTTCATCATCTTGGCGA+TGG + chr1_4:54127970-54127989 Msa0170200:CDS 45.0%
! AAGGCTAAGATTTTGGGCGA+CGG + chr1_4:54128033-54128052 Msa0170200:CDS 45.0%
ATATCTTGTCTGTCAAGGGC+TGG + chr1_4:54128073-54128092 Msa0170200:CDS 45.0%
AGTGTTTCCTCTATGACACC+GGG + chr1_4:54128130-54128149 Msa0170200:intron 45.0%
GTCAAGAAACTTTGAGCTCC+CGG - chr1_4:54128151-54128170 None:intergenic 45.0%
GACAAGCAAAATCACTGCTG+AGG - chr1_4:54128408-54128427 None:intergenic 45.0%
ATTCATGTGGTCATCCAACG+AGG - chr1_4:54128515-54128534 None:intergenic 45.0%
TCATCAAATTCCGTCACGCT+AGG - chr1_4:54128541-54128560 None:intergenic 45.0%
GACCGATGCAAACAACAAGT+AGG - chr1_4:54128564-54128583 None:intergenic 45.0%
! TGTTTGCATCGGTCAAATGG+CGG + chr1_4:54128570-54128589 Msa0170200:CDS 45.0%
TCAAGCAGTTCAACGAGGAT+GGG - chr1_4:54128878-54128897 None:intergenic 45.0%
TCTTGCACAGGAAATTCTGC+AGG + chr1_4:54128922-54128941 Msa0170200:CDS 45.0%
!! AACTTATTATATAATATATT+TGG + chr1_4:54112511-54112530 Msa0170200:intron 5.0%
!! ACTTATTATATAATATATTT+GGG + chr1_4:54112512-54112531 Msa0170200:intron 5.0%
!! TTGATATAAAATAATAAAAT+TGG - chr1_4:54117033-54117052 None:intergenic 5.0%
!!! TAGATTTTTTTTTTTTTTTT+TGG + chr1_4:54127710-54127729 Msa0170200:intron 5.0%
!! AAAATGAATATTTATTTATA+AGG - chr1_4:54128375-54128394 None:intergenic 5.0%
CTGCAAGGCAGTAGGGTTTA+GGG - chr1_4:54111235-54111254 None:intergenic 50.0%
AGAGAAGCTGCAAGGCAGTA+GGG - chr1_4:54111242-54111261 None:intergenic 50.0%
AAGAGAAGCTGCAAGGCAGT+AGG - chr1_4:54111243-54111262 None:intergenic 50.0%
TACAGAGCGCGGTTGAAAAG+AGG - chr1_4:54111267-54111286 None:intergenic 50.0%
!! CTTCGTTTTGGTACAGAGCG+CGG - chr1_4:54111278-54111297 None:intergenic 50.0%
GAAGTTACCTTGAGCAGCGA+TGG - chr1_4:54111516-54111535 None:intergenic 50.0%
GGGTGCAACACTACCTAGAA+TGG + chr1_4:54112184-54112203 Msa0170200:CDS 50.0%
CTCAGGCATATCCAGCTATG+TGG - chr1_4:54112851-54112870 None:intergenic 50.0%
CATAGCTGGATATGCCTGAG+TGG + chr1_4:54112851-54112870 Msa0170200:intron 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG + chr1_4:54113011-54113030 Msa0170200:intron 50.0%
AGGGAGGGAGTTGTGAAAAG+GGG + chr1_4:54113425-54113444 Msa0170200:intron 50.0%
TAAGGATGAAGACTGCCAGC+AGG + chr1_4:54114349-54114368 Msa0170200:CDS 50.0%
GCTGTACACAGCTCAGTTCT+TGG + chr1_4:54114626-54114645 Msa0170200:intron 50.0%
!!! CGTACAGTTTTGGGAGGAGA+GGG - chr1_4:54115288-54115307 None:intergenic 50.0%
!!! ACGTACAGTTTTGGGAGGAG+AGG - chr1_4:54115289-54115308 None:intergenic 50.0%
CATAGGATAACAGTCGGGGA+TGG - chr1_4:54115353-54115372 None:intergenic 50.0%
CATCCCCGACTGTTATCCTA+TGG + chr1_4:54115351-54115370 Msa0170200:intron 50.0%
AGCCCATAGGATAACAGTCG+GGG - chr1_4:54115357-54115376 None:intergenic 50.0%
CAGCCCATAGGATAACAGTC+GGG - chr1_4:54115358-54115377 None:intergenic 50.0%
!! CCACATAATCGTTGGGTTGG+GGG + chr1_4:54115651-54115670 Msa0170200:intron 50.0%
! TTGGAGGTGTACAAAGTCGG+GGG + chr1_4:54115701-54115720 Msa0170200:intron 50.0%
GTGTACAAAGTCGGGGGTTA+TGG + chr1_4:54115707-54115726 Msa0170200:intron 50.0%
!! CCACATAATCGTTGGGTTGG+GGG + chr1_4:54115651-54115670 Msa0170200:intron 50.0%
TGTGGTGTACAAAGTAGGGG+TGG + chr1_4:54116108-54116127 Msa0170200:intron 50.0%
!! GGGTCTTATTGACATCCCAG+AGG + chr1_4:54116488-54116507 Msa0170200:intron 50.0%
AAGCTGCTGTCTGGTAAGTG+TGG + chr1_4:54116645-54116664 Msa0170200:intron 50.0%
GACTGTAGGAATGGCCGAAT+AGG + chr1_4:54118312-54118331 Msa0170200:intron 50.0%
GTACTAGACGGGGTCCTATT+CGG - chr1_4:54118329-54118348 None:intergenic 50.0%
CAATCGCAGACATCGATACC+TGG + chr1_4:54118442-54118461 Msa0170200:intron 50.0%
TCCCACTCAGCCTTCAGAAT+AGG - chr1_4:54118816-54118835 None:intergenic 50.0%
! GTTCTTTTGGACGAGGTACG+GGG + chr1_4:54118858-54118877 Msa0170200:intron 50.0%
AACAAACAGTGCACAGAGGG+AGG - chr1_4:54119376-54119395 None:intergenic 50.0%
GGCAACAAACAGTGCACAGA+GGG - chr1_4:54119379-54119398 None:intergenic 50.0%
AGGCAACAAACAGTGCACAG+AGG - chr1_4:54119380-54119399 None:intergenic 50.0%
TACAGCAGGAACACCTACAC+AGG - chr1_4:54119854-54119873 None:intergenic 50.0%
GACTCGTACCTGATCATCAC+CGG - chr1_4:54119983-54120002 None:intergenic 50.0%
GTCTGTAAGGGTTGCTTCCA+TGG + chr1_4:54120176-54120195 Msa0170200:intron 50.0%
ATGCCCAATTCCCTTGAGCA+AGG - chr1_4:54121556-54121575 None:intergenic 50.0%
CTGAAGTCATGCCATCCAAC+TGG - chr1_4:54121922-54121941 None:intergenic 50.0%
TCAATTCTACACGGGGTTGC+AGG + chr1_4:54121994-54122013 Msa0170200:CDS 50.0%
GGGGTTGCAGGATAAAGCAA+AGG + chr1_4:54122006-54122025 Msa0170200:CDS 50.0%
GGCACAGAAACACAAGTGCA+AGG - chr1_4:54122353-54122372 None:intergenic 50.0%
! GATTGTCACCCTAAGGGCAT+TGG - chr1_4:54122721-54122740 None:intergenic 50.0%
! CTACGTCGATTGTCACCCTA+AGG - chr1_4:54122728-54122747 None:intergenic 50.0%
! CCTTCATGAGCAAGCTCTAG+AGG - chr1_4:54122825-54122844 None:intergenic 50.0%
!! CCTCTAGAGCTTGCTCATGA+AGG + chr1_4:54122822-54122841 Msa0170200:intron 50.0%
TGTTCTCATGGCACTGCTTG+GGG - chr1_4:54122849-54122868 None:intergenic 50.0%
GTGTTCTCATGGCACTGCTT+GGG - chr1_4:54122850-54122869 None:intergenic 50.0%
! TGGGGGTAGGGTACTAGAAA+AGG - chr1_4:54122935-54122954 None:intergenic 50.0%
!! TTTTCTAGTACCCTACCCCC+AGG + chr1_4:54122934-54122953 Msa0170200:intron 50.0%
! TTTCTAGTACCCTACCCCCA+GGG + chr1_4:54122935-54122954 Msa0170200:intron 50.0%
TCTCTTTCAAGGAGGCAACG+GGG - chr1_4:54122971-54122990 None:intergenic 50.0%
CTCTCTTTCAAGGAGGCAAC+GGG - chr1_4:54122972-54122991 None:intergenic 50.0%
GCCTCCATCATCTAGTGCTT+AGG - chr1_4:54122999-54123018 None:intergenic 50.0%
! AGAGGAAGTCTGAGATGGCT+TGG + chr1_4:54123103-54123122 Msa0170200:intron 50.0%
GACACACTTTCCCTTGAGGA+AGG + chr1_4:54123935-54123954 Msa0170200:CDS 50.0%
GTTGGGATGATCCTTCCTCA+AGG - chr1_4:54123949-54123968 None:intergenic 50.0%
GTTTCGGAAAGACTTGACGG+CGG - chr1_4:54123971-54123990 None:intergenic 50.0%
TGGAGAATCAGCTGTCACAC+AGG + chr1_4:54124337-54124356 Msa0170200:CDS 50.0%
! GATCTCGCTACCCCATCTTT+TGG + chr1_4:54124369-54124388 Msa0170200:intron 50.0%
GAGTCAACTCGGAGAGCTTA+TGG + chr1_4:54125908-54125927 Msa0170200:intron 50.0%
AAACTATGCGCGCTGTTGTG+AGG + chr1_4:54126015-54126034 Msa0170200:CDS 50.0%
TACCTCATCACGTGTACTCC+AGG + chr1_4:54126451-54126470 Msa0170200:intron 50.0%
TTCAAGGCATGCAACGAAGG+TGG - chr1_4:54126726-54126745 None:intergenic 50.0%
ATGAGCACGGGATTCCACTT+TGG - chr1_4:54127068-54127087 None:intergenic 50.0%
AAAGTGGAATCCCGTGCTCA+TGG + chr1_4:54127067-54127086 Msa0170200:CDS 50.0%
GTTCATCATCTTGGCGATGG+CGG + chr1_4:54127973-54127992 Msa0170200:CDS 50.0%
GGTTCAGAGGTTGCCACAAA+AGG - chr1_4:54128612-54128631 None:intergenic 50.0%
CTCAAGCAGTTCAACGAGGA+TGG - chr1_4:54128879-54128898 None:intergenic 50.0%
CATCCTCGTTGAACTGCTTG+AGG + chr1_4:54128877-54128896 Msa0170200:CDS 50.0%
CATCCTCAAGCAGTTCAACG+AGG - chr1_4:54128883-54128902 None:intergenic 50.0%
CGTTGAACTGCTTGAGGATG+TGG + chr1_4:54128883-54128902 Msa0170200:CDS 50.0%
GCTGCAAGGCAGTAGGGTTT+AGG - chr1_4:54111236-54111255 None:intergenic 55.0%
!!! GAACGGTCGCTTTTGAGGTG+CGG - chr1_4:54111429-54111448 None:intergenic 55.0%
!!! CGAGTGAACGGTCGCTTTTG+AGG - chr1_4:54111434-54111453 None:intergenic 55.0%
! TCGAGCGTTTGAAGTGCAGC+CGG - chr1_4:54111830-54111849 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG - chr1_4:54113010-54113029 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG + chr1_4:54113007-54113026 Msa0170200:intron 55.0%
GAGCCAGTTGATTACGGGGA+CGG + chr1_4:54113473-54113492 Msa0170200:intron 55.0%
CTCACAAGCACGAGCAATCC+CGG - chr1_4:54113794-54113813 None:intergenic 55.0%
GATTGCTCGTGCTTGTGAGG+AGG + chr1_4:54113795-54113814 Msa0170200:CDS 55.0%
CACACTTCCAACGAAGGCCT+TGG + chr1_4:54114020-54114039 Msa0170200:CDS 55.0%
TCAAGGACAGCAAAGCCTGC+TGG - chr1_4:54114367-54114386 None:intergenic 55.0%
ACTGCTGCACGGAGTTCAGA+AGG - chr1_4:54114806-54114825 None:intergenic 55.0%
CCCCCAACCCAACGATTATG+TGG - chr1_4:54115654-54115673 None:intergenic 55.0%
CCCCCAACCCAACGATTATG+TGG - chr1_4:54115654-54115673 None:intergenic 55.0%
! TGTGTTGGCAAGCTGCTGTC+TGG + chr1_4:54116636-54116655 Msa0170200:CDS 55.0%
TCACCAATCGTATGCAGGGC+AGG - chr1_4:54117649-54117668 None:intergenic 55.0%
TTGGACGAGGTACGGGGATT+TGG + chr1_4:54118864-54118883 Msa0170200:intron 55.0%
TCCATTGGCCGGTGATGATC+AGG + chr1_4:54119972-54119991 Msa0170200:CDS 55.0%
ACCTGATCATCACCGGCCAA+TGG - chr1_4:54119976-54119995 None:intergenic 55.0%
TTGCGGGGTCGCATTGAACA+TGG + chr1_4:54120222-54120241 Msa0170200:CDS 55.0%
AGCGTTGTTCACGTCCTCAC+TGG + chr1_4:54120411-54120430 Msa0170200:CDS 55.0%
GCGTTGTTCACGTCCTCACT+GGG + chr1_4:54120412-54120431 Msa0170200:CDS 55.0%
CGTTGTTCACGTCCTCACTG+GGG + chr1_4:54120413-54120432 Msa0170200:CDS 55.0%
GCGTCAAACCTTCCCGTAGT+TGG - chr1_4:54121336-54121355 None:intergenic 55.0%
GGTGTTCTCATGGCACTGCT+TGG - chr1_4:54122851-54122870 None:intergenic 55.0%
AGTGCCATGAGAACACCGCT+CGG + chr1_4:54122854-54122873 Msa0170200:intron 55.0%
!! TTTCTGGGTTGATGCCCGAG+CGG - chr1_4:54122872-54122891 None:intergenic 55.0%
TTCTAGTACCCTACCCCCAG+GGG + chr1_4:54122936-54122955 Msa0170200:intron 55.0%
GGAAAGACTTGACGGCGGTT+GGG - chr1_4:54123966-54123985 None:intergenic 55.0%
AGCCTGGAGTACACGTGATG+AGG - chr1_4:54126456-54126475 None:intergenic 55.0%
TCACGTGTACTCCAGGCTCT+TGG + chr1_4:54126458-54126477 Msa0170200:intron 55.0%
CACGTGTACTCCAGGCTCTT+GGG + chr1_4:54126459-54126478 Msa0170200:intron 55.0%
CACATAACAGCCCAAGAGCC+TGG - chr1_4:54126472-54126491 None:intergenic 55.0%
AGTGGCAGCAGTTTCAGCGT+TGG + chr1_4:54126667-54126686 Msa0170200:CDS 55.0%
TCAACGCAGCGGAAGTTCGA+AGG - chr1_4:54126802-54126821 None:intergenic 55.0%
! ATGGGGTGCATTTGAGGCTG+GGG - chr1_4:54126921-54126940 None:intergenic 55.0%
! GATGGGGTGCATTTGAGGCT+GGG - chr1_4:54126922-54126941 None:intergenic 55.0%
! AGATGGGGTGCATTTGAGGC+TGG - chr1_4:54126923-54126942 None:intergenic 55.0%
TACCCAACTGCTGTTGAGGC+TGG + chr1_4:54127242-54127261 Msa0170200:CDS 55.0%
ACCCAACTGCTGTTGAGGCT+GGG + chr1_4:54127243-54127262 Msa0170200:CDS 55.0%
!! TTGAGCTCCCGGTGTCATAG+AGG - chr1_4:54128140-54128159 None:intergenic 55.0%
ATGTGGTCATCCAACGAGGC+AGG - chr1_4:54128511-54128530 None:intergenic 55.0%
!! CAGCTGGCTCAGACCTTTTG+TGG + chr1_4:54128596-54128615 Msa0170200:CDS 55.0%
! AAGGTCTGGGGTTCGATCCC+CGG + chr1_4:54113053-54113072 Msa0170200:intron 60.0%
GGTCCGTCCCCGTAATCAAC+TGG - chr1_4:54113479-54113498 None:intergenic 60.0%
GTTGATTACGGGGACGGACC+TGG + chr1_4:54113479-54113498 Msa0170200:intron 60.0%
CGGGATTGCTCGTGCTTGTG+AGG + chr1_4:54113792-54113811 Msa0170200:CDS 60.0%
ATGATAGGACGAGCCCGGTG+TGG - chr1_4:54120440-54120459 None:intergenic 60.0%
GTGCCATGAGAACACCGCTC+GGG + chr1_4:54122855-54122874 Msa0170200:intron 60.0%
ATGCCCGAGCGGTGTTCTCA+TGG - chr1_4:54122861-54122880 None:intergenic 60.0%
TTCGACTTCCCCTGGGGGTA+GGG - chr1_4:54122947-54122966 None:intergenic 60.0%
ATTCGACTTCCCCTGGGGGT+AGG - chr1_4:54122948-54122967 None:intergenic 60.0%
ACGGGGATTCGACTTCCCCT+GGG - chr1_4:54122954-54122973 None:intergenic 60.0%
AACGGGGATTCGACTTCCCC+TGG - chr1_4:54122955-54122974 None:intergenic 60.0%
TGGCAGGCGCAGTTGACAGA+AGG - chr1_4:54123349-54123368 None:intergenic 60.0%
CGGAAAGACTTGACGGCGGT+TGG - chr1_4:54123967-54123986 None:intergenic 60.0%
CCCCAGCCTCAACAGCAGTT+GGG - chr1_4:54127247-54127266 None:intergenic 60.0%
CCCAACTGCTGTTGAGGCTG+GGG + chr1_4:54127244-54127263 Msa0170200:CDS 60.0%
TCCCCAGCCTCAACAGCAGT+TGG - chr1_4:54127248-54127267 None:intergenic 60.0%
! CTGTCAAGGGCTGGCATCTC+AGG + chr1_4:54128082-54128101 Msa0170200:CDS 60.0%
! TCTAGAGCCACCTGCCTCGT+TGG + chr1_4:54128498-54128517 Msa0170200:CDS 60.0%
TGGTCATCCAACGAGGCAGG+TGG - chr1_4:54128508-54128527 None:intergenic 60.0%
GGTCAAATGGCGGTCACAGC+TGG + chr1_4:54128580-54128599 Msa0170200:CDS 60.0%
GGGCCTGCCCTGCATACGAT+TGG + chr1_4:54117643-54117662 Msa0170200:intron 65.0%
GTCCTCACTGGGGTCCACAC+CGG + chr1_4:54120423-54120442 Msa0170200:CDS 65.0%
TCCTCACTGGGGTCCACACC+GGG + chr1_4:54120424-54120443 Msa0170200:CDS 65.0%
GGGGATTCGACTTCCCCTGG+GGG - chr1_4:54122952-54122971 None:intergenic 65.0%
CGGGGATTCGACTTCCCCTG+GGG - chr1_4:54122953-54122972 None:intergenic 65.0%
GCCCGGTGTGGACCCCAGTG+AGG - chr1_4:54120428-54120447 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 54111194 54129218 54111194 ID=Msa0170200;Name=Msa0170200
chr1_4 mRNA 54111194 54129218 54111194 ID=Msa0170200-mRNA-1;Parent=Msa0170200;Name=Msa0170200-mRNA-1;_AED=0.09;_eAED=0.09;_QI=174|0.94|0.94|1|1|1|39|230|2069
chr1_4 exon 54111194 54111527 54111194 ID=Msa0170200-mRNA-1:exon:16114;Parent=Msa0170200-mRNA-1
chr1_4 exon 54111657 54111870 54111657 ID=Msa0170200-mRNA-1:exon:16115;Parent=Msa0170200-mRNA-1
chr1_4 exon 54111963 54112058 54111963 ID=Msa0170200-mRNA-1:exon:16116;Parent=Msa0170200-mRNA-1
chr1_4 exon 54112145 54112265 54112145 ID=Msa0170200-mRNA-1:exon:16117;Parent=Msa0170200-mRNA-1
chr1_4 exon 54112339 54112500 54112339 ID=Msa0170200-mRNA-1:exon:16118;Parent=Msa0170200-mRNA-1
chr1_4 exon 54113706 54113873 54113706 ID=Msa0170200-mRNA-1:exon:16119;Parent=Msa0170200-mRNA-1
chr1_4 exon 54114006 54114061 54114006 ID=Msa0170200-mRNA-1:exon:16120;Parent=Msa0170200-mRNA-1
chr1_4 exon 54114168 54114257 54114168 ID=Msa0170200-mRNA-1:exon:16121;Parent=Msa0170200-mRNA-1
chr1_4 exon 54114346 54114494 54114346 ID=Msa0170200-mRNA-1:exon:16122;Parent=Msa0170200-mRNA-1
chr1_4 exon 54114759 54114841 54114759 ID=Msa0170200-mRNA-1:exon:16123;Parent=Msa0170200-mRNA-1
chr1_4 exon 54114929 54115060 54114929 ID=Msa0170200-mRNA-1:exon:16124;Parent=Msa0170200-mRNA-1
chr1_4 exon 54115187 54115261 54115187 ID=Msa0170200-mRNA-1:exon:16125;Parent=Msa0170200-mRNA-1
chr1_4 exon 54116489 54116657 54116489 ID=Msa0170200-mRNA-1:exon:16126;Parent=Msa0170200-mRNA-1
chr1_4 exon 54117728 54117828 54117728 ID=Msa0170200-mRNA-1:exon:16127;Parent=Msa0170200-mRNA-1
chr1_4 exon 54117945 54118025 54117945 ID=Msa0170200-mRNA-1:exon:16128;Parent=Msa0170200-mRNA-1
chr1_4 exon 54118451 54118634 54118451 ID=Msa0170200-mRNA-1:exon:16129;Parent=Msa0170200-mRNA-1
chr1_4 exon 54118775 54118872 54118775 ID=Msa0170200-mRNA-1:exon:16130;Parent=Msa0170200-mRNA-1
chr1_4 exon 54118970 54119128 54118970 ID=Msa0170200-mRNA-1:exon:16131;Parent=Msa0170200-mRNA-1
chr1_4 exon 54119432 54119567 54119432 ID=Msa0170200-mRNA-1:exon:16132;Parent=Msa0170200-mRNA-1
chr1_4 exon 54119860 54119993 54119860 ID=Msa0170200-mRNA-1:exon:16133;Parent=Msa0170200-mRNA-1
chr1_4 exon 54120177 54120243 54120177 ID=Msa0170200-mRNA-1:exon:16134;Parent=Msa0170200-mRNA-1
chr1_4 exon 54120332 54120491 54120332 ID=Msa0170200-mRNA-1:exon:16135;Parent=Msa0170200-mRNA-1
chr1_4 exon 54121277 54121346 54121277 ID=Msa0170200-mRNA-1:exon:16136;Parent=Msa0170200-mRNA-1
chr1_4 exon 54121540 54121689 54121540 ID=Msa0170200-mRNA-1:exon:16137;Parent=Msa0170200-mRNA-1
chr1_4 exon 54121774 54121836 54121774 ID=Msa0170200-mRNA-1:exon:16138;Parent=Msa0170200-mRNA-1
chr1_4 exon 54121923 54122027 54121923 ID=Msa0170200-mRNA-1:exon:16139;Parent=Msa0170200-mRNA-1
chr1_4 exon 54122339 54122428 54122339 ID=Msa0170200-mRNA-1:exon:16140;Parent=Msa0170200-mRNA-1
chr1_4 exon 54123584 54123786 54123584 ID=Msa0170200-mRNA-1:exon:16141;Parent=Msa0170200-mRNA-1
chr1_4 exon 54123871 54124069 54123871 ID=Msa0170200-mRNA-1:exon:16142;Parent=Msa0170200-mRNA-1
chr1_4 exon 54124176 54124358 54124176 ID=Msa0170200-mRNA-1:exon:16143;Parent=Msa0170200-mRNA-1
chr1_4 exon 54124541 54124636 54124541 ID=Msa0170200-mRNA-1:exon:16144;Parent=Msa0170200-mRNA-1
chr1_4 exon 54124740 54124807 54124740 ID=Msa0170200-mRNA-1:exon:16145;Parent=Msa0170200-mRNA-1
chr1_4 exon 54124890 54125235 54124890 ID=Msa0170200-mRNA-1:exon:16146;Parent=Msa0170200-mRNA-1
chr1_4 exon 54125909 54126124 54125909 ID=Msa0170200-mRNA-1:exon:16147;Parent=Msa0170200-mRNA-1
chr1_4 exon 54126473 54127120 54126473 ID=Msa0170200-mRNA-1:exon:16148;Parent=Msa0170200-mRNA-1
chr1_4 exon 54127209 54127600 54127209 ID=Msa0170200-mRNA-1:exon:16149;Parent=Msa0170200-mRNA-1
chr1_4 exon 54127930 54128110 54127930 ID=Msa0170200-mRNA-1:exon:16150;Parent=Msa0170200-mRNA-1
chr1_4 exon 54128466 54128636 54128466 ID=Msa0170200-mRNA-1:exon:16151;Parent=Msa0170200-mRNA-1
chr1_4 exon 54128755 54129218 54128755 ID=Msa0170200-mRNA-1:exon:16152;Parent=Msa0170200-mRNA-1
chr1_4 five_prime_UTR 54111194 54111367 54111194 ID=Msa0170200-mRNA-1:five_prime_utr;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54111368 54111527 54111368 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54111657 54111870 54111657 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54111963 54112058 54111963 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54112145 54112265 54112145 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54112339 54112500 54112339 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54113706 54113873 54113706 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54114006 54114061 54114006 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54114168 54114257 54114168 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54114346 54114494 54114346 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54114759 54114841 54114759 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54114929 54115060 54114929 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54115187 54115261 54115187 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54116489 54116657 54116489 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54117728 54117828 54117728 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54117945 54118025 54117945 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54118451 54118634 54118451 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54118775 54118872 54118775 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54118970 54119128 54118970 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54119432 54119567 54119432 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54119860 54119993 54119860 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54120177 54120243 54120177 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54120332 54120491 54120332 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54121277 54121346 54121277 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54121540 54121689 54121540 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54121774 54121836 54121774 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54121923 54122027 54121923 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54122339 54122428 54122339 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54123584 54123786 54123584 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54123871 54124069 54123871 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54124176 54124358 54124176 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54124541 54124636 54124541 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54124740 54124807 54124740 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54124890 54125235 54124890 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54125909 54126124 54125909 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54126473 54127120 54126473 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54127209 54127600 54127209 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54127930 54128110 54127930 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54128466 54128636 54128466 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 CDS 54128755 54128988 54128755 ID=Msa0170200-mRNA-1:cds;Parent=Msa0170200-mRNA-1
chr1_4 three_prime_UTR 54128989 54129218 54128989 ID=Msa0170200-mRNA-1:three_prime_utr;Parent=Msa0170200-mRNA-1
Gene Sequence

>Msa0170200

ATGGCAAATTCCTTGGCTTCTCAATTACAAGCTATCAGATCCATAGCACTTACTGATTCCGCACCTCAAAAGCGACCGTTCACTCGTCCTTCTATCTTGTTCGATCCTAAAGAAGCCGCTGATAAGAGTACTGAATCCATTTACACCATCGCTGCTCAAGGATTGGAGGTTCTGATTAGCACCGATGAAAGGTTTAGGAATTATAAGAATAGTTTGTTCAGTCCCCAGAGTAAAGAATTGGATAGAGGGTTAAAGACAGAAGACGAGAATAAACAACTTAATTCTTTGATTAATCCGTATTTGAAACTACTTTCTGGATATTTTAATCTTCCGGCTGCACTTCAAACGCTCGAGTATTTGATACGTGTATACAAGATACATGAGCACAATGTTGAGGATTTGATTTTGTGTGCATTGCCGTACCACGACACACATGCATTTGTTCGTGTAGTACAGATACTTAACATACGGAATGGTATATGGGAGTTTCTTAAAGGTGTGAAAGACTCGGGTGCAACACTACCTAGAATGGTTATAGTGCAGCAATGTCTTCGTGATTGTGGTGTATTATTAAAAAAATTATGCGACTATGCATCTCCATCCAAAAATCCTTCAAAGAATGTAATTGGCTTTTGCACTGCTGTTGTTGTTGAAGTTTTGGGTGTGAGGGTTGATGAAGATATTGTCAAAATCATATATCCTTTCGTGAATTCTGGTCTTCAGCCTGATAAGAAGGATCTTTCAGATCACAAGGCAAGTTCATTGATGATAGTTTGCTTGCTTGGACATAAAACAACATTAGCTCCATCACTTTTGAATGGTTTGATACGTTCAGTTGCCGGGATTGCTCGTGCTTGTGAGGAGGCTAAAGATCTTCATTGGTTTCGGTTGTCCCTTATTGCCTTAATCAATCTTGTCCAGTCCCAAAATGTTGACACACTTCCAACGAAGGCCTTGGATGTTTTAAAGAAACTAAGGGATTTGCCTGGGGTTTTATTAGAATTGTCTAAGGAGTTCAACATTGAAAAGTTTCTCATTGTTCTGTTGGACTCCCTAATTATCTGCAGTTCTAAGGATGAAGACTGCCAGCAGGCTTTGCTGTCCTTGATAGAAAAGGTCCCCATAAATGACTCTGTTCATCATGTGGTTACCAAGATCCTATCAACTTGTGTGAAACTATCAGAAAAAGTTGGTGACTCAACATCTTCGATGTCAGCTGGCTGGGCAAAAGAGACTCTGAAAATTGTTGATATGAAGTATCCTTCTGAACTCCGTGCAGCAGTTCATCATTTTCTTCAGCAGCATAACGCAGCACATTCTAAGAAAGACAATTCATTGTATAAGATTTTATGTAAGATGTTGGATGGCAATTTGGATTCATCATCTGATATCTCGATGTCAAAAGTTTGGTTTGGCTTGTATCATCCAAAGGCTGATATTAGACGTACTACACTGCTTGATATAAATTCTTCGGGCATCTTGAAAAACAAGGCATTTGTTTCAGAGGGTCTTATTGACATCCCAGAGGCCATATTGAGACAGTTTGATGATGAAGATCTAACAGTTGTTCAAGCAGCTTTAAATGTCGATGGCTTGGAAAACGTACCAGATTCTTCTAAGCTTCTCGAGGCACTGCAAAATGTGCTAAGAAGATGTGTTGGCAAGCTGCTGTCTGTTGCTGTCACTTGTCTAAAGAAAGCCATATCATACTTCCATGATCAGTACTTGGAAAGCATCGCTGCCATGATTTATCCATTACTCCTTGCTATGCCACAGACACAGGACTTAAATTTAAAAGCTCTGGTAATAGTCAAAGAAATTAACTGGCAACTTTATGATAATATTGCTGAAGAAACGACATCGATACCTGGATGTTTATCTTCAATTAACTTGAAGGTTATCAAAAAATTGGCTGGCAATTTCATGGTCCACCATGAAGATAATATCGATTGGTTTGTTAAAAGCTGCAATGATACAAAATTGTCAAAGACACTATTCTTTTTTGTTCTATTGCAGTCTCTTGTGCTGATAAAACCAAAAGGTGATAATGACTTTTCTGCACTCTTTGAAAGTGTGTTTCCTATTCTGAAGGCTGAGTGGGAATCTTCAGTGAATGCTGGTGATGTTCTTTTGGACGAGTTCAATTCTGAAGTGTTAGACTTAAACTCGGACTGTAGTGCATTCCTTGATCAGCTTTTGTATGCCAAACTCGGACCTCTAAATGCAAAAGTTATGGCTTGCATATTTTGGAGGCTGATTAAAGCACTAGTGCCAGATAAATCATCAGGCAATCTACTGGATGATAGCAAGATAAAGGATCTGTTTGTATTTTTCGCTTTGTCAAAGTTCGGAAATGCTTTCCATGAACACCTCCATTTCTTAGCAGCACAGTTCAGATCTGCCCACCTATTATCTAAGTTTTTTACAGACGAAGGTGTTCCTGCTGTAGTCCAAGTTGAAAGTCTCCAGTGCTATGGATCTCTTTGTACTCTGCAGCAAAATGGATGTCAAACTGATATTTTGGCTGAATTTCCTTCTCTTCTTGTTCCATTGGCCGGTGATGATCAGTCTGTAAGGGTTGCTTCCATGGAGTGTATTGTTAAGTTACACGCTTTGCGGGGTCGCATTGAACATGGGTTCCAGTTTCTGGAAGAACTTCTAATTGCGTTGGTTCAGATAAAAAAACTTATATTGTCTGACAAGAAAATTCTCTCAGCGTTGTTCACGTCCTCACTGGGGTCCACACCGGGCTCGTCCTATCATAATATCCTATTACCTCCAAATATGCAAAACAGGTTTGCTAAAAAAGAAGAAATACTTGAGTTCATTTTGGGTTATACTGGGAAATTCTCCAACTACGGGAAGCTAATGATTCTTTCCTTGCTCAAGGGAATTGGGCATCCTAAAATATCATCAATGCTGTCTAATTTAATGGAGCGATACTATAATAAACACGGCAATTCTTTCCAGAAATTTTCAAACACTGAAACTAGGATACTGTGTCTTTTGTTGGAGAACTGTGTAATGTCTTCTTCAGGTGGAGATGATCTTCAAAACTCTTTACAGAAAGTGTTGCAGTTGGATGGCATGACTTCAGACAACCCTGCTTATGTAGAGCCTTGCATCACTGTCTTGAAAAAGCTTAATAGTCAATTCTACACGGGGTTGCAGGATAAAGCAAAGGAACAATTATGCCTTGCACTTGTGTTTCTGTGCCGTAATGCTAATGGTGATGTACAAATTGCAACTAGAGAGGCCTTGATGCGCATAAATATAGATTTCAAAACTGTTGGCCGCATACTTGACCTCATACTTGCACCAAAGTGTGGCAAAATTAGGTCAGCAGACAAAAAGAGACAGAAATTGACAACACATCATGAAGAAGAACTTGATGACATATGCAGAATAGATAATCTGGTCGACAGTCTTAGTTCCCTTCTTGATGTTTTGTTACTGAAGAAAGACATAACAAACAGGCATTCTCTCTTAGACCCTTTATTTAAACTTCTTAGCGAAGTATTTTCAGAAGAATGGGTAAATGACACACTTTCCCTTGAGGAAGGATCATCCCAACCGCCGTCAAGTCTTTCCGAAACTGTAAATCATATTCAACAGACTCTATTGATTATCCTGGAGGATATAATCATGTCTCATGATAGCATGGCTGTGCTAAATGAAAAAATGACTAATGAGATTAATATTAAGCTACTGATAGAGTTTGCCCGGACTACTGATGTTGTTGTCACCCGCAACCATATATTTTCTCTGCTTTCTGCTGTCATTAGAGTCTTACCAGAAAAAGTGTTTGGGCATCTAATTGATATTCTTCCAGTTATTGGAGAATCAGCTGTCACACAGATCGACAGTCATTCAAAGCATGTATTTGAGGATCTTATATCTGCGATTGTTCCTTGTTGGCTGTCTAAGACAGATGATGTGGAGAAATTACTGAAGGTTTTCATAGATATATTTCCTGAAATTGTTGAGCACAGAAGGCTATCAATTGTTTTATATCTCCTACGAACTTTGGGTGAGGGTAAAAAATGCTTGGCCTCATTACTTATATTGTTGTTCACTTCCTTAGTTTCAAGGAAAGCCACCTGTTTCCTCAATATTGAGACGCCAGATGCTTTAACATTTTGTACTATAGAGTGGGAATATAAATTAGCAGTGCAGATTTGTGAACAGTATACAAGTATGACTTGGCTTCCTTCTTTAGTTTCCTTTTATGAACAGAGAGGAAATAAAAATGTTGACCAGTCAATGTTTCTGGAGTTGTTTCTGGCAATGCGATTTTGTTTGCAGAAGTTGCAAGATCCTGAATTGTTGTTCAAACTAGAATCAGGAGAAGGCTCTCTTGTCATTCAGAGTCAACTCGGAGAGCTTATGGAACATGTTGTTTTCCTCTTGCATCTTGTAGATGCAAGAAAAAAGGAACTAAATTTCTCTGTCATTGTGAGGAAAGAGTTGAAGGAAACTATGCGCGCTGTTGTGAGGAATATAACAATGGTTATGAGTCCTTCGATATACTTCAAGAGCATAATTAATTTGCTCGATCATTCAGATAAAGATGTTGGAGAAAAGGCTCTTGGGCTGTTATGTGATGCTGCAAGAAATCATGTAACAGTCAGCTTAACGCCTAAAGGCAACAAAGGTTCAAGATCAAGATCAAGTTCTCGTTGGCTTCAATTGGATGAAAGTTCTCAAGAATCACTTAATAATATGTGTTTAGAAATTCGTAAAGTCCTTGATGACGATTCATCAAACAACTCCTTGAAAGTGGCAGCAGTTTCAGCGTTGGAAGTTCTTGCAGAAAGTTTTCCTTCGAATAGTTCCACCTTCGTTGCATGCCTTGAATCTATTATTAGAAGATGCAATACATCTCAGAACTCTGCCGTGACTTCTAGTTGCCTTCGAACTTCCGCTGCGTTGATCAAAGTTCTTGGTCCAAAAGCACTGTCGAAACTTGATCAAATTATGACCGTGATAAAGTCCTCTAAGGATTTGGAACGAAAAGCTAACGATGTTTCCCCAGCCTCAAATGCACCCCATCTTGTTTCTGTTCTTGTTACTTTGGAGGCAGTTGTTGTCAAACTTGGTGGATTCCTAACTAAAGATTTAAAAAATATCATGGAGCTTCTGGTGCTTCGTCCAGAATTTGTCTCAGGAATAGATGCCAAAGTGGAATCCCGTGCTCATGGATTACGAAAGCTTCTTGCGGAAAAAATTCCAGTACGGCTTGCCCTGCCGCCATTGTTAGAAATATACCCAACTGCTGTTGAGGCTGGGGATAAAAGCTTAACAATTGTGTTTGATATGTTGGCAACATTTATTGGTACAATGGACAGATCATCTATTGTGGCATTCCATGGAAGGATTTTTGACTTTTGTTTGGTTGCTCTTGATCTTCGTCGAAGTCCTCATTCAGTTCAAAACATTGATTTAGTGGAAGAAGGTGTGAAGAATGCTATGCTTGCACTGACCCTAAAGCTTACAGAGAGCATGTTCAAGCCTCTTTTTATAAGGAGTATTGAGTGGGTAGTCGATGAAACTGTATCTTCAGGAAGCATGGATAGGGCCATATCTTTCTATGGCATGGTAAATAAGCTTGCTGAGAACCATCGGTCATTGTTTGTTCCTTACTTCAAATACTTGCTTAGTAACTGTGTTCATCATCTTGGCGATGGCGGAGACCTTAAAATGTTTAGTTCGAGTCAGAAGAAAAAGAAGGCTAAGATTTTGGGCGACGGCGATGTAAAAGAAACAGATATCTTGTCTGTCAAGGGCTGGCATCTCAGGACACTAATGTTGTTGAAACCTATTGTTTCTCAACTTGATCTAGAGCCACCTGCCTCGTTGGATGACCACATGAATATACCTAGCGTGACGGAATTTGATGACCTACTTGTTGTTTGCATCGGTCAAATGGCGGTCACAGCTGGCTCAGACCTTTTGTGGCAACCTCTGAACCGCGAAGTTTTGATGCAGACACAACGTACCGAGAAGACACGAGCTAGAATATTGGGTCTTAGAATTGTTAAATACCTTGTAGATAACTTGAAAGAAGAATATTCAGTGTTATTAGCTGAAACAATTCCCATCCTCGTTGAACTGCTTGAGGATGTGGAACTTTCAGTTAAATCTCTTGCACAGGAAATTCTGCAGGAAATAGAGTCTTTGAGTGGGGAGAGCCTTCGAGACTACCTATGA
Protein sequence

>Msa0170200

MANSLASQLQAIRSIALTDSAPQKRPFTRPSILFDPKEAADKSTESIYTIAAQGLEVLISTDERFRNYKNSLFSPQSKELDRGLKTEDENKQLNSLINPYLKLLSGYFNLPAALQTLEYLIRVYKIHEHNVEDLILCALPYHDTHAFVRVVQILNIRNGIWEFLKGVKDSGATLPRMVIVQQCLRDCGVLLKKLCDYASPSKNPSKNVIGFCTAVVVEVLGVRVDEDIVKIIYPFVNSGLQPDKKDLSDHKASSLMIVCLLGHKTTLAPSLLNGLIRSVAGIARACEEAKDLHWFRLSLIALINLVQSQNVDTLPTKALDVLKKLRDLPGVLLELSKEFNIEKFLIVLLDSLIICSSKDEDCQQALLSLIEKVPINDSVHHVVTKILSTCVKLSEKVGDSTSSMSAGWAKETLKIVDMKYPSELRAAVHHFLQQHNAAHSKKDNSLYKILCKMLDGNLDSSSDISMSKVWFGLYHPKADIRRTTLLDINSSGILKNKAFVSEGLIDIPEAILRQFDDEDLTVVQAALNVDGLENVPDSSKLLEALQNVLRRCVGKLLSVAVTCLKKAISYFHDQYLESIAAMIYPLLLAMPQTQDLNLKALVIVKEINWQLYDNIAEETTSIPGCLSSINLKVIKKLAGNFMVHHEDNIDWFVKSCNDTKLSKTLFFFVLLQSLVLIKPKGDNDFSALFESVFPILKAEWESSVNAGDVLLDEFNSEVLDLNSDCSAFLDQLLYAKLGPLNAKVMACIFWRLIKALVPDKSSGNLLDDSKIKDLFVFFALSKFGNAFHEHLHFLAAQFRSAHLLSKFFTDEGVPAVVQVESLQCYGSLCTLQQNGCQTDILAEFPSLLVPLAGDDQSVRVASMECIVKLHALRGRIEHGFQFLEELLIALVQIKKLILSDKKILSALFTSSLGSTPGSSYHNILLPPNMQNRFAKKEEILEFILGYTGKFSNYGKLMILSLLKGIGHPKISSMLSNLMERYYNKHGNSFQKFSNTETRILCLLLENCVMSSSGGDDLQNSLQKVLQLDGMTSDNPAYVEPCITVLKKLNSQFYTGLQDKAKEQLCLALVFLCRNANGDVQIATREALMRINIDFKTVGRILDLILAPKCGKIRSADKKRQKLTTHHEEELDDICRIDNLVDSLSSLLDVLLLKKDITNRHSLLDPLFKLLSEVFSEEWVNDTLSLEEGSSQPPSSLSETVNHIQQTLLIILEDIIMSHDSMAVLNEKMTNEINIKLLIEFARTTDVVVTRNHIFSLLSAVIRVLPEKVFGHLIDILPVIGESAVTQIDSHSKHVFEDLISAIVPCWLSKTDDVEKLLKVFIDIFPEIVEHRRLSIVLYLLRTLGEGKKCLASLLILLFTSLVSRKATCFLNIETPDALTFCTIEWEYKLAVQICEQYTSMTWLPSLVSFYEQRGNKNVDQSMFLELFLAMRFCLQKLQDPELLFKLESGEGSLVIQSQLGELMEHVVFLLHLVDARKKELNFSVIVRKELKETMRAVVRNITMVMSPSIYFKSIINLLDHSDKDVGEKALGLLCDAARNHVTVSLTPKGNKGSRSRSSSRWLQLDESSQESLNNMCLEIRKVLDDDSSNNSLKVAAVSALEVLAESFPSNSSTFVACLESIIRRCNTSQNSAVTSSCLRTSAALIKVLGPKALSKLDQIMTVIKSSKDLERKANDVSPASNAPHLVSVLVTLEAVVVKLGGFLTKDLKNIMELLVLRPEFVSGIDAKVESRAHGLRKLLAEKIPVRLALPPLLEIYPTAVEAGDKSLTIVFDMLATFIGTMDRSSIVAFHGRIFDFCLVALDLRRSPHSVQNIDLVEEGVKNAMLALTLKLTESMFKPLFIRSIEWVVDETVSSGSMDRAISFYGMVNKLAENHRSLFVPYFKYLLSNCVHHLGDGGDLKMFSSSQKKKKAKILGDGDVKETDILSVKGWHLRTLMLLKPIVSQLDLEPPASLDDHMNIPSVTEFDDLLVVCIGQMAVTAGSDLLWQPLNREVLMQTQRTEKTRARILGLRIVKYLVDNLKEEYSVLLAETIPILVELLEDVELSVKSLAQEILQEIESLSGESLRDYL*