AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0077750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0077750 MtrunA17_Chr5g0443891 93.033 2110 112 5 1 2077 1 2108 0.0 3795
Msa0077750 MtrunA17_Chr5g0443841 42.735 117 56 5 1566 1677 36 146 9.17e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0077750 AT3G06530.5 44.553 1533 727 38 637 2081 711 2208 0.0 1093
Msa0077750 AT3G06530.5 50.000 690 326 11 1 676 1 685 0.0 618
Msa0077750 AT3G06530.4 44.553 1533 727 38 637 2081 713 2210 0.0 1093
Msa0077750 AT3G06530.4 49.711 692 327 12 1 676 1 687 0.0 614
Msa0077750 AT3G06530.1 44.780 1523 727 38 637 2081 711 2197 0.0 1093
Msa0077750 AT3G06530.1 50.000 690 326 11 1 676 1 685 0.0 618
Msa0077750 AT3G06530.3 44.481 1522 722 39 637 2081 713 2188 0.0 1075
Msa0077750 AT3G06530.3 49.711 692 327 12 1 676 1 687 0.0 614
Msa0077750 AT3G06530.2 44.256 1532 722 39 637 2081 713 2199 0.0 1074
Msa0077750 AT3G06530.2 49.711 692 327 12 1 676 1 687 0.0 614

Find 402 sgRNAs with CRISPR-Local

Find 1165 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAGTGTTTGAAAATTTC+TGG 0.082321 1_2:+54782957 None:intergenic
ATTGATATTCTTCCAGTTAT+TGG 0.102959 1_2:-54780271 Msa0077750:CDS
TACAACAGGGTTCCAGTTTC+TGG 0.138676 1_2:-54784248 Msa0077750:intron
AGAAATACTTGAGTTCATTT+TGG 0.152846 1_2:-54783300 Msa0077750:CDS
ATTATCACCTGCAGATAATT+AGG 0.158360 1_2:+54790153 None:intergenic
TGTTGACCAGTCAATGTTTC+TGG 0.167580 1_2:-54779503 Msa0077750:CDS
CTTCTGTGCTCAACAATTTC+AGG 0.172948 1_2:+54779863 None:intergenic
TTGGAAGTGTGTCAACATTT+TGG 0.188777 1_2:+54790388 None:intergenic
ATCAATGCTGTCTAATTTAA+TGG 0.189325 1_2:-54783011 Msa0077750:CDS
AACATATTATGGCCATTTAA+AGG 0.189970 1_2:-54775547 Msa0077750:three_prime_UTR
ATCTCTGATTCCATTTAAAA+AGG 0.194494 1_2:+54775416 None:intergenic
TGCTGTTGTTGTTGAAGTTT+TGG 0.205063 1_2:-54792929 Msa0077750:CDS
CTGTATTTGAAACTACTTTC+TGG 0.207940 1_2:-54793524 Msa0077750:CDS
ATTTCCTCTCTGTTCATAAA+AGG 0.208310 1_2:+54779531 None:intergenic
ACATGCTCTCTGTAAGCTTT+AGG 0.211122 1_2:+54777130 None:intergenic
AAGTTATGGCTTGCATATTT+TGG 0.215559 1_2:-54785506 Msa0077750:CDS
AATCCTTCAAAGAATGTAAT+TGG 0.216676 1_2:-54792961 Msa0077750:CDS
GCTGCAAGGCAGTAGGGTTT+AGG 0.219910 1_2:+54794135 None:intergenic
GATATGTTGGCAACATTTAT+TGG 0.222201 1_2:-54777300 Msa0077750:CDS
TTCTGTTAAGGAATGGTATA+TGG 0.227314 1_2:-54793180 Msa0077750:intron
ATGCCACCTTTCCCTTTAAA+TGG 0.231720 1_2:+54775535 None:intergenic
TGGATGTCAAACTGATATTT+TGG 0.241563 1_2:-54784643 Msa0077750:CDS
TATGATCATTTGCAGTTCTA+AGG 0.249022 1_2:-54790065 Msa0077750:intron
ACCGAAAATGTTAGTCTTGC+TGG 0.266643 1_2:-54786865 Msa0077750:CDS
ATATATCCTTTCGTGAATTC+TGG 0.269787 1_2:-54792874 Msa0077750:CDS
TAAGATGTTGGATGGCAATT+TGG 0.271688 1_2:-54789413 Msa0077750:CDS
AATGTTTCTGGAGTTGTTTC+TGG 0.274972 1_2:-54779491 Msa0077750:CDS
ATGATGAACAGAGTCATTTA+TGG 0.277685 1_2:+54789997 None:intergenic
GGTATATGGGAGTTTCTTAA+AGG 0.279802 1_2:-54793166 Msa0077750:CDS
CAAGATTGATTAAGGCAATA+AGG 0.280374 1_2:+54790550 None:intergenic
TCGCTAAGAAGTTTAAATAA+AGG 0.280802 1_2:+54780704 None:intergenic
CTCTTATCAGCGGCTTCTTT+AGG 0.291025 1_2:+54793895 None:intergenic
CTGCAAGGCAGTAGGGTTTA+GGG 0.292602 1_2:+54794136 None:intergenic
TCAAGTTTCGACAGTGCTTT+TGG 0.294129 1_2:+54777754 None:intergenic
GCTGCGTTGATCAAAGTTCT+TGG 0.297231 1_2:-54777778 Msa0077750:CDS
AGAATTGAGAAGTTAGGGTT+AGG 0.306103 1_2:+54794046 None:intergenic
GATAAAGTCCTCTAAGGATT+TGG 0.308192 1_2:-54777716 Msa0077750:CDS
GAAGGAAGAATTGAGAAGTT+AGG 0.308727 1_2:+54794040 None:intergenic
CGCTAAGAAGTTTAAATAAA+GGG 0.309156 1_2:+54780705 None:intergenic
GAATGCTGGTGATGTTCTTT+TGG 0.309414 1_2:-54785719 Msa0077750:CDS
CTAAAGATCTTCATTGGTTT+CGG 0.310067 1_2:-54790578 Msa0077750:CDS
TTTGCATATTTGGAGGTAAT+AGG 0.311235 1_2:+54784107 None:intergenic
CTGTCAAGGGCTGGCATCTC+AGG 0.316846 1_2:-54776517 Msa0077750:CDS
ATATCTCGATGTCAAAAGTT+TGG 0.318754 1_2:-54789378 Msa0077750:CDS
TCTAGTTTGAACAACAATTC+AGG 0.319024 1_2:+54779436 None:intergenic
AGAAGGCTCTCTTGTCATTC+AGG 0.319624 1_2:-54779407 Msa0077750:intron
TTAGAAGTTCTTCCAGAAAC+TGG 0.324863 1_2:+54784236 None:intergenic
CTTTGTACTCTGCAGCAAAA+TGG 0.327871 1_2:-54784663 Msa0077750:CDS
CTCTTTACAGAAAGTGTTGC+AGG 0.331318 1_2:-54782780 Msa0077750:intron
CGTGTTCTTCTTCTTCGTTT+TGG 0.336037 1_2:+54794081 None:intergenic
AATGGCCATAATATGTTCAT+TGG 0.337522 1_2:+54775553 None:intergenic
TCTATTCCTGAGACAAATTC+TGG 0.343670 1_2:+54777550 None:intergenic
AGCGTTGTTCACGTCCTCAC+TGG 0.343696 1_2:-54784161 Msa0077750:CDS
CATGCTCTCTGTAAGCTTTA+GGG 0.347308 1_2:+54777131 None:intergenic
TTGAGCAGCGATGGTGTAAA+TGG 0.347980 1_2:+54793864 None:intergenic
GTAGACCAATGAACATATTA+TGG 0.352074 1_2:-54775558 Msa0077750:three_prime_UTR
AGTTCAAAACATTGATTTAG+TGG 0.354050 1_2:-54777187 Msa0077750:CDS
TGTGTAATGTCTTCTCCTTC+AGG 0.354547 1_2:-54782821 Msa0077750:CDS
TTTATCTTCAATTAACTTGA+AGG 0.354964 1_2:-54786095 Msa0077750:CDS
CTGCTTGATATAAATTCTTC+GGG 0.357022 1_2:-54789187 Msa0077750:CDS
CTAAGAAATGGAGGTGTTCA+TGG 0.357685 1_2:+54785076 None:intergenic
TGTTTCTGTTCTTGTTACTT+TGG 0.358918 1_2:-54777647 Msa0077750:CDS
TATCTGCGATTGTTCCTTGT+TGG 0.359436 1_2:-54780010 Msa0077750:CDS
TTGAATATGATTTACAGTTT+CGG 0.362706 1_2:+54780607 None:intergenic
TCAATTCTACACGGGGTTGC+AGG 0.365876 1_2:-54782601 Msa0077750:CDS
ACATATTATGGCCATTTAAA+GGG 0.366890 1_2:-54775546 Msa0077750:three_prime_UTR
GATAGGGCCATATCTTTCTA+TGG 0.367033 1_2:-54777042 Msa0077750:CDS
TGCTGCACTATAACCATTCT+AGG 0.367211 1_2:+54793118 None:intergenic
TCCTTCTCTTCTTGTTCCAT+TGG 0.368665 1_2:-54784613 Msa0077750:CDS
AGATTGCCTGATGATTTATC+TGG 0.368678 1_2:+54785462 None:intergenic
TGTTAAGTTACACGCCTTGC+GGG 0.369016 1_2:-54784366 Msa0077750:CDS
CACACAAGTTGATAGGATCT+TGG 0.372295 1_2:+54789967 None:intergenic
ATCATCAAACTGTCTCAATA+TGG 0.372395 1_2:+54787943 None:intergenic
AAAATTGGCTGGCAATTTCA+TGG 0.372685 1_2:-54786065 Msa0077750:CDS
TCACGTGTACTCCAGGCTCT+TGG 0.376330 1_2:-54778132 Msa0077750:intron
ACTGCTTGATATAAATTCTT+CGG 0.376474 1_2:-54789188 Msa0077750:CDS
CAGAAAGCAGAGAAAATATA+TGG 0.378151 1_2:+54780335 None:intergenic
GAGTCAACTCGGAGAGCTTA+TGG 0.379771 1_2:-54778680 Msa0077750:CDS
TGTTCACTTCCTTAGTTTCA+AGG 0.380452 1_2:-54779684 Msa0077750:CDS
TTAGCACCGATGAAAGGTTT+AGG 0.380735 1_2:-54793643 Msa0077750:CDS
CAGTCCCCAGAGTAAAGAAT+TGG 0.381140 1_2:-54793600 Msa0077750:CDS
CACCAAAGTGTGGCAAAATT+AGG 0.381449 1_2:-54780965 Msa0077750:CDS
TACCTGGACAAGATTGATTA+AGG 0.381450 1_2:+54790542 None:intergenic
TGCATTTAGAGGTCCGAGTT+TGG 0.383943 1_2:+54785530 None:intergenic
TTGATGATAGTTTGCTTGCT+TGG 0.385008 1_2:-54790681 Msa0077750:CDS
CTTGAACCTTTGTTGCCTTT+AGG 0.387639 1_2:+54778063 None:intergenic
TATATCCTTTCGTGAATTCT+GGG 0.391830 1_2:-54792873 Msa0077750:CDS
ACAGCTGATTCTCCAATAAC+TGG 0.392134 1_2:+54780259 None:intergenic
AAGTTCTCGTTGGCTTCAAT+TGG 0.392921 1_2:-54778031 Msa0077750:CDS
GGTTTGATACGTTCAGTTGC+CGG 0.395567 1_2:-54790624 Msa0077750:CDS
GTCTGTAAGGGTTGCTTCCA+TGG 0.396373 1_2:-54784396 Msa0077750:CDS
GAATTGAGAAGTTAGGGTTA+GGG 0.397023 1_2:+54794047 None:intergenic
AACAATTGTGTTTGATATGT+TGG 0.397730 1_2:-54777313 Msa0077750:CDS
TATTCTAGCTCGTGTCTTCT+CGG 0.397937 1_2:+54775820 None:intergenic
CTCTATCCAATTCTTTACTC+TGG 0.397972 1_2:+54793594 None:intergenic
ACCAATCGATATTATCTTCA+TGG 0.398205 1_2:+54786038 None:intergenic
GACCGTGATAAAGTCCTCTA+AGG 0.400034 1_2:-54777722 Msa0077750:CDS
GTACAAAATGTTAAAGCATC+TGG 0.400035 1_2:+54779631 None:intergenic
TACTAGTCAAAGAAATTAAC+TGG 0.400542 1_2:-54786592 Msa0077750:CDS
GAAGACACGAGCTAGAATAT+TGG 0.402292 1_2:-54775816 Msa0077750:CDS
AAGCCAATTACATTCTTTGA+AGG 0.402673 1_2:+54792958 None:intergenic
GAAATTCTTTGCAGTCTGTA+AGG 0.403205 1_2:-54784409 Msa0077750:intron
CTAAGCAAGTATTTGAAGTA+AGG 0.403689 1_2:+54776656 None:intergenic
TCTGAAAGATCCTTCTTATC+AGG 0.405015 1_2:+54792844 None:intergenic
AAGGAAGAATTGAGAAGTTA+GGG 0.405988 1_2:+54794041 None:intergenic
CGGAAAGACTTGACGGCGGT+TGG 0.408112 1_2:+54780627 None:intergenic
TACCCAACTGCTGTTGAGGC+TGG 0.410333 1_2:-54777348 Msa0077750:CDS
GTACATCACCATTAGCATTA+CGG 0.411573 1_2:+54782224 None:intergenic
ATAGTTTCACACAAGTTGAT+AGG 0.411967 1_2:+54789960 None:intergenic
CGTCTCAATATTGAGGAAAC+AGG 0.412781 1_2:+54779654 None:intergenic
TACCTCCAAATATGCAAAAC+AGG 0.412938 1_2:-54784102 Msa0077750:intron
AGGAGGCTAAAGATCTTCAT+TGG 0.414016 1_2:-54790584 Msa0077750:CDS
CGTTGAACTGCTTGAGGATG+TGG 0.415239 1_2:-54775714 Msa0077750:CDS
CATATGCAGAATAGATAATC+TGG 0.415561 1_2:-54780886 Msa0077750:CDS
GCAGGATGATAGCAAGATAA+AGG 0.416003 1_2:-54785142 Msa0077750:intron
CAGAGAAAATATATGGTTGC+GGG 0.417767 1_2:+54780342 None:intergenic
TCTAGCAATGGCAAATTCCT+TGG 0.418379 1_2:-54794007 Msa0077750:exon
TCCATTGGCCGGTGATGATC+AGG 0.421713 1_2:-54784598 Msa0077750:intron
CTGATCATGGAAGTATGATA+TGG 0.423107 1_2:+54786813 None:intergenic
CACGTGTACTCCAGGCTCTT+GGG 0.423504 1_2:-54778131 Msa0077750:intron
TGAAACTGCTGCCACTTTCA+AGG 0.426613 1_2:+54777930 None:intergenic
AAGACACGAGCTAGAATATT+GGG 0.426925 1_2:-54775815 Msa0077750:CDS
GGACTTAAATTTAAAAGCTC+TGG 0.429000 1_2:-54786615 Msa0077750:CDS
TTATCACCTGCAGATAATTA+GGG 0.429558 1_2:+54790154 None:intergenic
TGATGAACAGAGTCATTTAT+GGG 0.430170 1_2:+54789998 None:intergenic
TTGTTGTTCAAACTAGAATC+AGG 0.430374 1_2:-54779430 Msa0077750:CDS
GGTCAAATGGCGGTCACAGC+TGG 0.430545 1_2:-54776017 Msa0077750:CDS
TTCTGTTCTTGTTACTTTGG+AGG 0.431905 1_2:-54777644 Msa0077750:CDS
TGTTGTTTGCATCGGTCAAA+TGG 0.435055 1_2:-54776030 Msa0077750:CDS
AGATGGGGTGCATTTGAGGC+TGG 0.435141 1_2:+54777670 None:intergenic
AACAAGATGGGGTGCATTTG+AGG 0.436206 1_2:+54777666 None:intergenic
CAGATAGATTTCAAAACTGT+TGG 0.436222 1_2:-54781011 Msa0077750:CDS
TGACAACAACATCGGTAGTC+CGG 0.436550 1_2:+54780365 None:intergenic
AGATCAAGTTGAGAAACAAT+AGG 0.436903 1_2:+54776119 None:intergenic
GTCGATGAAACTGTATCTTC+AGG 0.437715 1_2:-54777072 Msa0077750:CDS
TCCTCACTGGGGTCCACACC+GGG 0.439221 1_2:-54784148 Msa0077750:CDS
CTAGAATTGTGTAATCATAT+AGG 0.440214 1_2:-54775592 Msa0077750:three_prime_UTR
GCGTTGTTCACGTCCTCACT+GGG 0.440734 1_2:-54784160 Msa0077750:CDS
TCTCCTTGCTCAAGGGAATC+CGG 0.441673 1_2:-54783048 Msa0077750:CDS
TCGAGAAGCTTAGAAGAATC+TGG 0.442401 1_2:+54787866 None:intergenic
ATCTTCTAATAATAGATTCA+AGG 0.442427 1_2:+54777851 None:intergenic
AAGATTGATTAAGGCAATAA+GGG 0.442710 1_2:+54790551 None:intergenic
AGTAACTGTGTTCATCATCT+TGG 0.443392 1_2:-54776635 Msa0077750:CDS
TTTCTTATAGGGATTTGCCT+GGG 0.443564 1_2:-54790238 Msa0077750:intron
TCGATGTCAAAAGTTTGGTT+TGG 0.445202 1_2:-54789373 Msa0077750:CDS
ACCTCTAAATGCAAAAGTTA+TGG 0.445268 1_2:-54785520 Msa0077750:CDS
ACTGGGAAATTCTCCAACTA+CGG 0.446747 1_2:-54783272 Msa0077750:CDS
TGGTTGTGTTTCAGGATTGG+AGG 0.446865 1_2:-54793672 Msa0077750:intron
AACATTGATTTAGTGGAAGA+AGG 0.447201 1_2:-54777180 Msa0077750:CDS
TTAGGATCGAACAAGATAGA+AGG 0.448135 1_2:+54793913 None:intergenic
CTCACAAGCACGAGCAATCC+CGG 0.449224 1_2:+54790605 None:intergenic
AGATAAAGATGTTGGAGAAA+AGG 0.450730 1_2:-54778485 Msa0077750:intron
TCTCTTCTTGTTCCATTGGC+CGG 0.453208 1_2:-54784609 Msa0077750:CDS
CACACTTCCAACGAAGGCCT+TGG 0.454043 1_2:-54790376 Msa0077750:CDS
TCATTCAAAGCATGTATTTG+AGG 0.454056 1_2:-54780039 Msa0077750:CDS
CTGAAATTGTTGAGCACAGA+AGG 0.454487 1_2:-54779862 Msa0077750:CDS
GGTGGCTTTCCTTGAAACTA+AGG 0.458786 1_2:+54779675 None:intergenic
TGAACTGTGCTGCTAAGAAA+TGG 0.461333 1_2:+54785064 None:intergenic
TCTATCCAATTCTTTACTCT+GGG 0.461382 1_2:+54793595 None:intergenic
GGTTCAGAGGTTGCCACAAA+AGG 0.462676 1_2:+54775988 None:intergenic
GGAAAGACTTGACGGCGGTT+GGG 0.464408 1_2:+54780628 None:intergenic
TCAAATGTCAATTAGCTGGC+TGG 0.465347 1_2:-54789652 Msa0077750:intron
TACCATGCCATAGAAAGATA+TGG 0.465493 1_2:+54777035 None:intergenic
TTCAGTTAAATCTCTTGCAC+AGG 0.468315 1_2:-54775687 Msa0077750:CDS
TTGATAGAGGAAATTTCAGT+TGG 0.469921 1_2:-54794176 Msa0077750:five_prime_UTR
CTCAAGCAGTTCAACGAGGA+TGG 0.471313 1_2:+54775721 None:intergenic
GACTCAACATCTTCGATGTC+AGG 0.472414 1_2:-54789923 Msa0077750:intron
GTTTGATACGTTCAGTTGCC+GGG 0.473503 1_2:-54790623 Msa0077750:CDS
ATGCAGGGCTCTACATAAGC+AGG 0.473860 1_2:+54782648 None:intergenic
TGCCTTAATCAATCTTGTCC+AGG 0.474061 1_2:-54790544 Msa0077750:intron
CACACTTTGGTGCAAGTATG+AGG 0.477598 1_2:+54780976 None:intergenic
AGGTAATAGGATATTATGAT+AGG 0.478047 1_2:+54784120 None:intergenic
AAAGTTTCTAGTTGTTCTGT+TGG 0.478369 1_2:-54790180 Msa0077750:CDS
GATGGGGTGCATTTGAGGCT+GGG 0.478686 1_2:+54777671 None:intergenic
ACCCAACTGCTGTTGAGGCT+GGG 0.479632 1_2:-54777347 Msa0077750:CDS
TCCCCAGCCTCAACAGCAGT+TGG 0.481565 1_2:+54777345 None:intergenic
CATTGTGAGGAAAGAGTTGA+AGG 0.483626 1_2:-54778596 Msa0077750:CDS
GCGTCAAACCTTCCCGTAGT+TGG 0.484266 1_2:+54783259 None:intergenic
CTTCGTCCAGAATTTGTCTC+AGG 0.484756 1_2:-54777556 Msa0077750:CDS
ATAGAGGAAATTTCAGTTGG+CGG 0.486354 1_2:-54794173 Msa0077750:five_prime_UTR
GCAGTTGTTGTCAAACTTGG+TGG 0.487519 1_2:-54777622 Msa0077750:CDS
CAGAGTAAAGAATTGGATAG+AGG 0.488546 1_2:-54793593 Msa0077750:CDS
AGCTTTAAATGTCGATGGCT+TGG 0.489294 1_2:-54787897 Msa0077750:CDS
TGATAATATTGCTGAAGAAA+CGG 0.490134 1_2:-54786561 Msa0077750:intron
ACAGACTCTATTGATTATCC+TGG 0.490500 1_2:-54780585 Msa0077750:CDS
AGCTACTGATAGAGTTTGCC+CGG 0.490850 1_2:-54780384 Msa0077750:CDS
CTTCTTTCAAGTTATCTACA+AGG 0.490910 1_2:+54775774 None:intergenic
TGCTTTCCAAGTACTGATCA+TGG 0.491140 1_2:+54786800 None:intergenic
ATGAGCACGGGATTCCACTT+TGG 0.491601 1_2:+54777525 None:intergenic
CTTTCAACTTGGACTACAGC+AGG 0.493781 1_2:+54784705 None:intergenic
CCCAACTGCTGTTGAGGCTG+GGG 0.493988 1_2:-54777346 Msa0077750:CDS
TGTGTTGGCAAGCTGCTGTC+TGG 0.498264 1_2:-54787818 Msa0077750:intron
GGGTCGAAATTACTTGATAG+AGG 0.499518 1_2:-54794189 None:intergenic
ACAGTCAGCTTAACGCCTAA+AGG 0.499628 1_2:-54778078 Msa0077750:CDS
TCTGTTAAGGAATGGTATAT+GGG 0.499920 1_2:-54793179 Msa0077750:intron
TAACAAGAACAGAAACAAGA+TGG 0.500724 1_2:+54777653 None:intergenic
TGAAGAAAGACATAACAAAC+AGG 0.501969 1_2:-54780827 Msa0077750:intron
CAAATGTCAATTAGCTGGCT+GGG 0.502489 1_2:-54789651 Msa0077750:intron
GAGGCAGTTGTTGTCAAACT+TGG 0.502858 1_2:-54777625 Msa0077750:CDS
ATATTTCTAACAATGGCGGC+AGG 0.504743 1_2:+54777370 None:intergenic
TCCTATTCTGAAGGCTGAGT+GGG 0.506035 1_2:-54785752 Msa0077750:CDS
TATCTTCAGGAAGCATGGAT+AGG 0.507487 1_2:-54777059 Msa0077750:CDS
AACAGATATCTTGTCTGTCA+AGG 0.508062 1_2:-54776531 Msa0077750:CDS
TCCCACTCAGCCTTCAGAAT+AGG 0.509055 1_2:+54785751 None:intergenic
TACAAAGAGATCCATAGCAC+TGG 0.509387 1_2:+54784679 None:intergenic
TTCAACGAATCTAACATCAT+AGG 0.509809 1_2:+54775615 None:intergenic
TTTGCTGTCCTTGATAGAAA+AGG 0.510636 1_2:-54790023 Msa0077750:CDS
ATCAAACCATTCAAAAGTGA+TGG 0.511914 1_2:+54790639 None:intergenic
GACAACAACATCGGTAGTCC+GGG 0.512307 1_2:+54780366 None:intergenic
TCATCTATTGTGGCATTCCA+TGG 0.512846 1_2:-54777264 Msa0077750:CDS
CCCCAGCCTCAACAGCAGTT+GGG 0.512947 1_2:+54777346 None:intergenic
ATCAAACAACTCCTTGAAAG+TGG 0.513706 1_2:-54777941 Msa0077750:CDS
AAACAAGGCATTTGTTTCAG+AGG 0.513764 1_2:-54789155 Msa0077750:intron
CTAGTGCCAGATAAATCATC+AGG 0.514392 1_2:-54785468 Msa0077750:CDS
CTTGTGCTGATAAAACCAAA+AGG 0.516170 1_2:-54785950 Msa0077750:intron
AATGCATGTGTTTCGTGGTA+CGG 0.516554 1_2:+54793309 None:intergenic
CATCCTCGTTGAACTGCTTG+AGG 0.516563 1_2:-54775720 Msa0077750:CDS
GGCCATATCTTTCTATGGCA+TGG 0.516981 1_2:-54777037 Msa0077750:CDS
TTTCTGTGCCGTAATGCTAA+TGG 0.517009 1_2:-54782232 Msa0077750:CDS
TTCTTATAGGGATTTGCCTG+GGG 0.518384 1_2:-54790237 Msa0077750:intron
AGCACTGGAGACTTTCAACT+TGG 0.518538 1_2:+54784694 None:intergenic
AAGAGAAGCTGCAAGGCAGT+AGG 0.518720 1_2:+54794128 None:intergenic
GAACAAATGCATGTGTTTCG+TGG 0.519209 1_2:+54793304 None:intergenic
GGCAACATTTATTGGTACAA+TGG 0.519554 1_2:-54777292 Msa0077750:CDS
AAAGTGGAATCCCGTGCTCA+TGG 0.520023 1_2:-54777523 Msa0077750:CDS
GTCCTCACTGGGGTCCACAC+CGG 0.522145 1_2:-54784149 Msa0077750:CDS
ATACTTCCATGATCAGTACT+TGG 0.522733 1_2:-54786806 Msa0077750:CDS
AAGGAGTAATGGATAAATCA+TGG 0.523492 1_2:+54786771 None:intergenic
GATCATTCAGATAAAGATGT+TGG 0.523801 1_2:-54778493 Msa0077750:CDS
TGGGCTTCAGCCTGATAAGA+AGG 0.523807 1_2:-54792854 Msa0077750:CDS
CTATTGTGGCATTCCATGGA+AGG 0.527726 1_2:-54777260 Msa0077750:CDS
ATGTGGTCATCCAACGAGGC+AGG 0.528235 1_2:+54776089 None:intergenic
ACTGTCTCAATATGGCCTCT+AGG 0.528303 1_2:+54787951 None:intergenic
TCAAGGACAGCAAAGCCTGC+TGG 0.528595 1_2:+54790032 None:intergenic
ATCTTCAGGAAGCATGGATA+GGG 0.529004 1_2:-54777058 Msa0077750:CDS
TAACTTAACAATACACTCCA+TGG 0.529174 1_2:+54784379 None:intergenic
TAAATCATCAGGCAATCTAC+TGG 0.529570 1_2:-54785457 Msa0077750:intron
AACTGTATCTTCAGGAAGCA+TGG 0.529959 1_2:-54777064 Msa0077750:CDS
ACAGTTTCGGAAAGACTTGA+CGG 0.531853 1_2:+54780620 None:intergenic
TCAGTAACAAAACATCAAGA+AGG 0.531872 1_2:+54780847 None:intergenic
TCTAGACCCACCTGCCTCGT+TGG 0.533358 1_2:-54776099 Msa0077750:CDS
ATTACTCCTTGCTATGCCAC+AGG 0.533955 1_2:-54786758 Msa0077750:intron
CAATCGCAGACATCGATACC+TGG 0.534673 1_2:-54786121 Msa0077750:intron
TCTTGCACAGGAAATTCTGC+AGG 0.535392 1_2:-54775675 Msa0077750:CDS
GGGTGCAACACTACCTAGAA+TGG 0.535731 1_2:-54793131 Msa0077750:CDS
ATAATTCCTAAACCTTTCAT+CGG 0.535764 1_2:+54793637 None:intergenic
GGAAGAACTTCTAATTGCGT+TGG 0.537618 1_2:-54784227 Msa0077750:CDS
CTTAATAGTCAATTCTACAC+GGG 0.538323 1_2:-54782609 Msa0077750:CDS
GTTTGGCTTGTATCATCCAA+AGG 0.541542 1_2:-54789356 Msa0077750:intron
CTTAAAGGTGTGAAAGACTC+GGG 0.541680 1_2:-54793151 Msa0077750:CDS
TTATGGCCATTTAAAGGGAA+AGG 0.542773 1_2:-54775541 Msa0077750:three_prime_UTR
ATGTTCAATGCGACCCCGCA+AGG 0.543120 1_2:+54784352 None:intergenic
CAAGCAGCTTTAAATGTCGA+TGG 0.545621 1_2:-54787902 Msa0077750:CDS
AAAACATCCAAGGCCTTCGT+TGG 0.546236 1_2:+54790369 None:intergenic
ATATCTTGTCTGTCAAGGGC+TGG 0.546502 1_2:-54776526 Msa0077750:CDS
GTTGAAAGTCTCCAGTGCTA+TGG 0.546932 1_2:-54784690 Msa0077750:CDS
AATTATACTTCGCGGTTCAG+AGG 0.551394 1_2:+54775975 None:intergenic
TGGACTCCCTAATTATCTGC+AGG 0.551807 1_2:-54790160 Msa0077750:intron
AATGATTCTCTCCTTGCTCA+AGG 0.552709 1_2:-54783056 Msa0077750:CDS
AAGATAGAAGGACGAGTGAA+CGG 0.552986 1_2:+54793925 None:intergenic
AGAGAAGCTGCAAGGCAGTA+GGG 0.553654 1_2:+54794129 None:intergenic
CATCTGGCGTCTCAATATTG+AGG 0.553929 1_2:+54779647 None:intergenic
CTTTCGTAATCCATGAGCAC+GGG 0.554981 1_2:+54777513 None:intergenic
AGTGGCAGCAGTTTCAGCGT+TGG 0.555141 1_2:-54777923 Msa0077750:CDS
GACCTACTTGTTGTTTGCAT+CGG 0.555245 1_2:-54776038 Msa0077750:CDS
AACAAGAACAGAAACAAGAT+GGG 0.555402 1_2:+54777654 None:intergenic
TTGTTAAGTTACACGCCTTG+CGG 0.555552 1_2:-54784367 Msa0077750:CDS
GACAATTCTAATAAAACCCC+AGG 0.555785 1_2:+54790221 None:intergenic
TGCGGAATCAGTAAGTGCTA+TGG 0.557132 1_2:+54793960 None:intergenic
CTGGGAAATTCTCCAACTAC+GGG 0.557628 1_2:-54783271 Msa0077750:CDS
TGTTTGATGAATCGTCATCA+AGG 0.559889 1_2:+54777956 None:intergenic
TAAGGATGAAGACTGCCAGC+AGG 0.559986 1_2:-54790047 Msa0077750:CDS
TTTCAACCTGTGGCATAGCA+AGG 0.561730 1_2:+54786752 None:intergenic
GAGACATGATTATATCCTCC+AGG 0.561844 1_2:+54780567 None:intergenic
GCAGAGAAAATATATGGTTG+CGG 0.561950 1_2:+54780341 None:intergenic
TGTGGCATAGCAAGGAGTAA+TGG 0.562119 1_2:+54786760 None:intergenic
GAACAACAATATAAGTAATG+AGG 0.562235 1_2:+54779702 None:intergenic
GAAGTTACCTTGAGCAGCGA+TGG 0.562297 1_2:+54793855 None:intergenic
GCCAATGGAACAAGAAGAGA+AGG 0.564011 1_2:+54784612 None:intergenic
ACCATGAAGATAATATCGAT+TGG 0.565898 1_2:-54786039 Msa0077750:CDS
TACAGAGCGCGGTTGAAAAG+AGG 0.566020 1_2:+54794104 None:intergenic
TCAAGCAGTTCAACGAGGAT+GGG 0.566456 1_2:+54775722 None:intergenic
TTCTCATTAGCACCGATGAA+AGG 0.567079 1_2:-54793649 Msa0077750:CDS
AATATACCCAACTGCTGTTG+AGG 0.567549 1_2:-54777352 Msa0077750:CDS
AAGTGTGTTTCCTATTCTGA+AGG 0.567559 1_2:-54785761 Msa0077750:CDS
ATGGGGTGCATTTGAGGCTG+GGG 0.567866 1_2:+54777672 None:intergenic
CTAATATTGCAGAGTCAACT+CGG 0.568126 1_2:-54778691 Msa0077750:intron
CAGCAATGTCTTCGTGATTG+TGG 0.568575 1_2:-54793100 Msa0077750:CDS
TCTTAAAGGTGTGAAAGACT+CGG 0.569391 1_2:-54793152 Msa0077750:CDS
AGCTTGTAATTGAGAAGCCA+AGG 0.570228 1_2:+54793990 None:intergenic
TAGTTTCTTTAAAACATCCA+AGG 0.571442 1_2:+54790359 None:intergenic
CGGGATTGCTCGTGCTTGTG+AGG 0.575385 1_2:-54790604 Msa0077750:CDS
ACCTGATCATCACCGGCCAA+TGG 0.576742 1_2:+54784597 None:intergenic
ATAAGCTTGCTGAGAACCAT+CGG 0.577111 1_2:-54777011 Msa0077750:intron
GACTCGTACCTGATCATCAC+CGG 0.577862 1_2:+54784590 None:intergenic
AAATTCTTTGCAGTCTGTAA+GGG 0.578702 1_2:-54784408 Msa0077750:intron
TGGTCATCCAACGAGGCAGG+TGG 0.578970 1_2:+54776092 None:intergenic
TCATCAAATTCCGTCACGCT+AGG 0.579162 1_2:+54776059 None:intergenic
TGAAGATCATCTCCACCTGA+AGG 0.580784 1_2:+54782806 None:intergenic
TTGCGGGGTCGCATTGAACA+TGG 0.582274 1_2:-54784350 Msa0077750:intron
ACAGATATCTTGTCTGTCAA+GGG 0.582471 1_2:-54776530 Msa0077750:CDS
GTTAAGTTACACGCCTTGCG+GGG 0.582859 1_2:-54784365 Msa0077750:CDS
TGTGTTCATCATCTTGGCGA+TGG 0.584716 1_2:-54776629 Msa0077750:CDS
TCATAAAAGGAAACTAAAGA+AGG 0.584814 1_2:+54779544 None:intergenic
TAAATTTCTCTGTCATTGTG+AGG 0.584896 1_2:-54778609 Msa0077750:CDS
GACGCACTTTCCCTTGAGGA+AGG 0.585066 1_2:-54780656 Msa0077750:CDS
ACTCACATTTATGCGCATCA+AGG 0.585262 1_2:+54782183 None:intergenic
CTCAGGAATAGATGCCAAAG+TGG 0.587107 1_2:-54777539 Msa0077750:CDS
ATTTACACCATCGCTGCTCA+AGG 0.587470 1_2:-54793862 Msa0077750:intron
TCGAGCGTTTGAAGTGCAGC+CGG 0.587577 1_2:+54793488 None:intergenic
TCATCGCAAAATTCTAGCAA+TGG 0.587825 1_2:-54794019 Msa0077750:exon
GTTGGGTATATTTCTAACAA+TGG 0.588872 1_2:+54777363 None:intergenic
AGAGTAAAGAATTGGATAGA+GGG 0.592118 1_2:-54793592 Msa0077750:CDS
AATCATGTCTCATGATAGCA+TGG 0.592596 1_2:-54780555 Msa0077750:CDS
TAGTACAGATACTTAAGATA+CGG 0.592971 1_2:-54793278 Msa0077750:intron
TCAACGCAGCGGAAGTTCGA+AGG 0.593614 1_2:+54777791 None:intergenic
GGATTCAGTACTCTTATCAG+CGG 0.596784 1_2:+54793885 None:intergenic
GATCAAGATCAAGTTCTCGT+TGG 0.598397 1_2:-54778041 Msa0077750:CDS
TTGCATCTACAAGATGCAAG+AGG 0.600709 1_2:+54778644 None:intergenic
ATCCTTAGAGGACTTTATCA+CGG 0.603588 1_2:+54777720 None:intergenic
TCGAAGGCTCTCCCCACTCA+AGG 0.604270 1_2:+54775643 None:intergenic
ACTGCTGCACGGAGTTCAGA+AGG 0.604583 1_2:+54789593 None:intergenic
TTCAAGGCATGCAACGAAGG+TGG 0.605103 1_2:+54777867 None:intergenic
CAGGAAATAGAGTCCTTGAG+TGG 0.605182 1_2:-54775656 Msa0077750:CDS
ATATTATGATAGGACGAGCC+CGG 0.609745 1_2:+54784130 None:intergenic
AGATTCAAGGCATGCAACGA+AGG 0.610484 1_2:+54777864 None:intergenic
GTAATGTCTTCTCCTTCAGG+TGG 0.611054 1_2:-54782818 Msa0077750:CDS
AGGAAATAGAGTCCTTGAGT+GGG 0.611672 1_2:-54775655 Msa0077750:CDS
AAATGACGCACTTTCCCTTG+AGG 0.611941 1_2:-54780660 Msa0077750:CDS
AAACTATGCGCGCTGTTGTG+AGG 0.612613 1_2:-54778573 Msa0077750:CDS
TTCCTATTCTGAAGGCTGAG+TGG 0.614009 1_2:-54785753 Msa0077750:CDS
TGGAGAATCAGCTGTCACAC+AGG 0.614162 1_2:-54780251 Msa0077750:intron
TGGGAATCTTCAGTGAATGC+TGG 0.615272 1_2:-54785733 Msa0077750:CDS
GCTTTCGTAATCCATGAGCA+CGG 0.616224 1_2:+54777512 None:intergenic
ATGATTCTCTCCTTGCTCAA+GGG 0.617194 1_2:-54783055 Msa0077750:CDS
AAATGACTCTGTTCATCATG+TGG 0.618126 1_2:-54789993 Msa0077750:CDS
GATTGCTCGTGCTTGTGAGG+AGG 0.618365 1_2:-54790601 Msa0077750:CDS
TTCAAACTAGAATCAGGAGA+AGG 0.620739 1_2:-54779424 Msa0077750:CDS
TGGCCATTTAAAGGGAAAGG+TGG 0.622157 1_2:-54775538 Msa0077750:three_prime_UTR
CTCATACTTGCACCAAAGTG+TGG 0.624114 1_2:-54780975 Msa0077750:CDS
GAAGGATCTTTCAGATCACA+AGG 0.624368 1_2:-54792836 Msa0077750:intron
CAGTAACAAAACATCAAGAA+GGG 0.625838 1_2:+54780848 None:intergenic
CTATCCAATTCTTTACTCTG+GGG 0.626014 1_2:+54793596 None:intergenic
AATGGACAGATCATCTATTG+TGG 0.627181 1_2:-54777274 Msa0077750:CDS
GAAATTCTCCAACTACGGGA+AGG 0.628693 1_2:-54783267 Msa0077750:intron
TCGAAGGCAACTAGAACTCA+CGG 0.630725 1_2:+54777807 None:intergenic
GATACATGAGCACAATGTTG+AGG 0.631551 1_2:-54793352 Msa0077750:CDS
ATGCCGGATTCCCTTGAGCA+AGG 0.631993 1_2:+54783045 None:intergenic
ACAACTCCAGAAACATTGAC+TGG 0.633006 1_2:+54779497 None:intergenic
TGTTTGCATCGGTCAAATGG+CGG 0.634876 1_2:-54776027 Msa0077750:CDS
CAGAGGTTGCCACAAAAGGT+CGG 0.635486 1_2:+54775992 None:intergenic
AACATCATAGGTAGTCTCGA+AGG 0.636589 1_2:+54775627 None:intergenic
GTTCATCATCTTGGCGATGG+CGG 0.638833 1_2:-54776626 Msa0077750:CDS
TGTACAAATTGCAACTAGAG+AGG 0.639841 1_2:-54782206 Msa0077750:CDS
CTCAATATTGAGGAAACAGG+TGG 0.640604 1_2:+54779657 None:intergenic
TGTTGACACACTTCCAACGA+AGG 0.640723 1_2:-54790382 Msa0077750:CDS
ATGCTCTTGAAGTATATCGA+AGG 0.640746 1_2:+54778529 None:intergenic
TTGGGATGATCCTTCCTCAA+GGG 0.641835 1_2:+54780646 None:intergenic
AGATTCTTCTAAGCTTCTCG+AGG 0.641925 1_2:-54787864 Msa0077750:CDS
AACAGTATACAAGTATGACT+TGG 0.642247 1_2:-54779570 Msa0077750:CDS
GACTCTATTGATTATCCTGG+AGG 0.642367 1_2:-54780582 Msa0077750:CDS
TATTTCTAACAATGGCGGCA+GGG 0.643298 1_2:+54777371 None:intergenic
GCTGTCTAAGACAGATGATG+TGG 0.643610 1_2:-54779988 Msa0077750:CDS
TGGATTACGAAAGCTTCTTG+CGG 0.644128 1_2:-54777503 Msa0077750:CDS
CATGAATATACCTAGCGTGA+CGG 0.645722 1_2:-54776069 Msa0077750:CDS
TTAACGCCTAAAGGCAACAA+AGG 0.645984 1_2:-54778069 Msa0077750:CDS
GCTTAATAGTCAATTCTACA+CGG 0.647249 1_2:-54782610 Msa0077750:CDS
ATGATAGGACGAGCCCGGTG+TGG 0.649195 1_2:+54784135 None:intergenic
GGGTATATTTCTAACAATGG+CGG 0.649343 1_2:+54777366 None:intergenic
GTTGGGATGATCCTTCCTCA+AGG 0.651749 1_2:+54780645 None:intergenic
AAACGAAGAAGAAGAACACG+AGG 0.654037 1_2:-54794078 Msa0077750:five_prime_UTR
TCACGCTAGGTATATTCATG+TGG 0.655802 1_2:+54776072 None:intergenic
ACGAAGGTGGAACTATTCGA+AGG 0.655938 1_2:+54777880 None:intergenic
AATGTGCTAAGAAGATGTGT+TGG 0.656297 1_2:-54787833 Msa0077750:CDS
AAGAGGAAAGAGAAGCTGCA+AGG 0.657357 1_2:+54794121 None:intergenic
TGAAGCCCAGAATTCACGAA+AGG 0.661612 1_2:+54792868 None:intergenic
CAAGTATGAGGTCAAGTATG+CGG 0.662111 1_2:+54780988 None:intergenic
TGTTGTGAGGAATATAACAA+TGG 0.663001 1_2:-54778560 Msa0077750:CDS
GGTCATCCAACGAGGCAGGT+GGG 0.663637 1_2:+54776093 None:intergenic
TTAATTGAAGATAAACAACC+AGG 0.665288 1_2:+54786103 None:intergenic
TCTGTCTTAGACAGCCAACA+AGG 0.666621 1_2:+54779996 None:intergenic
GGGGTTGCAGGATAAAGCAA+AGG 0.670963 1_2:-54782589 Msa0077750:intron
AATCGATATTATCTTCATGG+TGG 0.671175 1_2:+54786041 None:intergenic
TGAAGTGTTAGACTTAAACT+CGG 0.673175 1_2:-54785586 Msa0077750:CDS
GGAAATAGAGTCCTTGAGTG+GGG 0.677660 1_2:-54775654 Msa0077750:CDS
TGCAGGGCTCTACATAAGCA+GGG 0.679189 1_2:+54782649 None:intergenic
GACCGATGCAAACAACAAGT+AGG 0.679966 1_2:+54776036 None:intergenic
GCCCGGTGTGGACCCCAGTG+AGG 0.687104 1_2:+54784147 None:intergenic
TTAATAGTCAATTCTACACG+GGG 0.687408 1_2:-54782608 Msa0077750:CDS
GATGAACAGAGTCATTTATG+GGG 0.694679 1_2:+54789999 None:intergenic
GAAAATGATGAACTGCTGCA+CGG 0.698379 1_2:+54789582 None:intergenic
GAGCGATACTATAATAAACA+CGG 0.699526 1_2:-54782989 Msa0077750:CDS
TGATGTGGAGAAATTACTGA+AGG 0.704064 1_2:-54779973 Msa0077750:intron
ACTGTGCTGCTAAGAAATGG+AGG 0.705738 1_2:+54785067 None:intergenic
GTTGCGGGTGACAACAACAT+CGG 0.706802 1_2:+54780357 None:intergenic
GGGTCTTATTGACATCCTAG+AGG 0.721055 1_2:-54787966 Msa0077750:CDS
ATTCATGTGGTCATCCAACG+AGG 0.731331 1_2:+54776085 None:intergenic
CGTTGTTCACGTCCTCACTG+GGG 0.736218 1_2:-54784159 Msa0077750:CDS
ACAAGAACAGAAACAAGATG+GGG 0.736831 1_2:+54777655 None:intergenic
CATCCTCAAGCAGTTCAACG+AGG 0.737282 1_2:+54775717 None:intergenic
AAGAACTTTGATCAACGCAG+CGG 0.745827 1_2:+54777780 None:intergenic
GTTTCGGAAAGACTTGACGG+CGG 0.791918 1_2:+54780623 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AATTTATTATATAATATATT+TGG - chr1_2:54776774-54776793 Msa0077750:intron 0.0%
!! ATTTATTATATAATATATTT+GGG - chr1_2:54776775-54776794 Msa0077750:intron 0.0%
!! ATATATATATATATATATAT+AGG - chr1_2:54777905-54777924 Msa0077750:CDS 0.0%
!! TATATATATATATATATATA+GGG - chr1_2:54777906-54777925 Msa0077750:CDS 0.0%
!! ATATATATATATATATATAT+GGG + chr1_2:54777905-54777924 None:intergenic 0.0%
!! TATATATATATATATATATA+TGG + chr1_2:54777906-54777925 None:intergenic 0.0%
!! AATTAATACTAATATGTAAA+TGG + chr1_2:54776898-54776917 None:intergenic 10.0%
!! AGTTAACAATAAATAATTTA+AGG + chr1_2:54777191-54777210 None:intergenic 10.0%
!!! TACTTTTTATTTTATTGAAT+TGG - chr1_2:54778285-54778304 Msa0077750:intron 10.0%
!!! ACTTTTTATTTTATTGAATT+GGG - chr1_2:54778286-54778305 Msa0077750:intron 10.0%
!! TTAATTTCAATATTAATCAA+TGG + chr1_2:54778708-54778727 None:intergenic 10.0%
!! ATTGATTAATATTGAAATTA+AGG - chr1_2:54778707-54778726 Msa0077750:intron 10.0%
!! TTGATTAATATTGAAATTAA+GGG - chr1_2:54778708-54778727 Msa0077750:intron 10.0%
!! ATATACATATTAAAAACAAA+TGG + chr1_2:54779301-54779320 None:intergenic 10.0%
!! GAAAAAATATAATCAAAAAT+AGG + chr1_2:54781004-54781023 None:intergenic 10.0%
!!! TTCAATTTTTATAATTACTT+TGG - chr1_2:54782587-54782606 Msa0077750:intron 10.0%
!!! TCAATTTTTATAATTACTTT+GGG - chr1_2:54782588-54782607 Msa0077750:intron 10.0%
!!! AATTATACTTTTTTCATTTT+TGG - chr1_2:54785831-54785850 Msa0077750:intron 10.0%
!!! TCATTTTAAAAATTAATAGT+TGG + chr1_2:54788352-54788371 None:intergenic 10.0%
!!! TTTCTTTTTATTTTTTTTCT+TGG - chr1_2:54790673-54790692 Msa0077750:CDS 10.0%
!!! TATTTTTTAAATCTTTAGTT+AGG + chr1_2:54791985-54792004 None:intergenic 10.0%
!! TAAAGATTTAAAAAATATCA+TGG - chr1_2:54791988-54792007 Msa0077750:intron 10.0%
!!! TTATTAATATGACATTTTTT+TGG - chr1_2:54792849-54792868 Msa0077750:CDS 10.0%
!!! CACTATTTATTTTAAAAATA+TGG - chr1_2:54793185-54793204 Msa0077750:intron 10.0%
!!! CTTTTTAAACTATAAATTTG+AGG + chr1_2:54777770-54777789 None:intergenic 15.0%
!!! ATTAAAATTCTATTAGGTTT+TGG - chr1_2:54778484-54778503 Msa0077750:intron 15.0%
!!! GCAATTTTTTTTTATTGAAT+CGG + chr1_2:54778565-54778584 None:intergenic 15.0%
!!! AATTTTTTCTGTTTGATTAA+TGG - chr1_2:54779080-54779099 Msa0077750:intron 15.0%
!! AAATTTAAAAAGATTGGAAA+TGG - chr1_2:54779716-54779735 Msa0077750:CDS 15.0%
!!! TTTTTTTTTTACTGTCAAAA+TGG - chr1_2:54781045-54781064 Msa0077750:intron 15.0%
!!! TTTTTCAAAATTTTGAACAA+AGG + chr1_2:54781267-54781286 None:intergenic 15.0%
!! TTGATAAATAAAAATTTCAG+AGG + chr1_2:54782471-54782490 None:intergenic 15.0%
!!! TCATATTTGTTTTAAAAACA+GGG - chr1_2:54783726-54783745 Msa0077750:intron 15.0%
!!! GTTCTATAATTAACATTTTA+TGG - chr1_2:54784792-54784811 Msa0077750:intron 15.0%
!! AAAAAATAATTAGGCATAAA+GGG + chr1_2:54785286-54785305 None:intergenic 15.0%
!! TAAAAAATAATTAGGCATAA+AGG + chr1_2:54785287-54785306 None:intergenic 15.0%
!! TATGAAGGTAAAAAATAATT+AGG + chr1_2:54785295-54785314 None:intergenic 15.0%
!!! TCAATATTTTACACATTATA+AGG + chr1_2:54785659-54785678 None:intergenic 15.0%
!!! TAAATTTGCATTGATTAATA+TGG + chr1_2:54785783-54785802 None:intergenic 15.0%
!!! GATACATACTATTTTATTTT+TGG + chr1_2:54785972-54785991 None:intergenic 15.0%
!!! TATTTTTGAACATAATTTTC+AGG - chr1_2:54786241-54786260 Msa0077750:intron 15.0%
!!! TGTTAATATGATTTTAATTG+TGG - chr1_2:54786367-54786386 Msa0077750:intron 15.0%
!!! TAAGAAAGTATCTTATTTTT+GGG - chr1_2:54786484-54786503 Msa0077750:intron 15.0%
!! CAAGAAAAAATCAATAATTT+AGG + chr1_2:54787158-54787177 None:intergenic 15.0%
!! AAAAATTAATAAAAAGAAGC+AGG + chr1_2:54789134-54789153 None:intergenic 15.0%
!! TTACTTTGTTCAATTATATT+GGG - chr1_2:54790244-54790263 Msa0077750:intron 15.0%
!!! CTTAAACATTATTTTATTAC+AGG - chr1_2:54792175-54792194 Msa0077750:intron 15.0%
!!! ATCTCTAGATTTATTTTTTT+TGG - chr1_2:54792690-54792709 Msa0077750:intron 15.0%
!! ATATATTGAAAATTTAGACA+TGG - chr1_2:54792817-54792836 Msa0077750:intron 15.0%
!! TATATTGAAAATTTAGACAT+GGG - chr1_2:54792818-54792837 Msa0077750:intron 15.0%
!!! GAAATTTGAATTTGAGTTTT+TGG - chr1_2:54775886-54775905 Msa0077750:intron 20.0%
!!! TGATTTGATTTGTTTTTGTA+TGG - chr1_2:54776151-54776170 Msa0077750:intron 20.0%
!!! ATAACTATGTTTTTTGTTAC+AGG - chr1_2:54776580-54776599 Msa0077750:CDS 20.0%
!! CAATTAATTTCATGATTCTA+CGG - chr1_2:54777018-54777037 Msa0077750:CDS 20.0%
!!! TTTTTTAAGTTATCAAACTC+CGG - chr1_2:54777053-54777072 Msa0077750:CDS 20.0%
!! ATAGAATAACAAGTTTAAAG+CGG + chr1_2:54777541-54777560 None:intergenic 20.0%
!! TTAAATACATGTTCAGTTAT+AGG - chr1_2:54777670-54777689 Msa0077750:CDS 20.0%
!! TAAATACATGTTCAGTTATA+GGG - chr1_2:54777671-54777690 Msa0077750:CDS 20.0%
!! TATATATATATATATAGGGG+AGG - chr1_2:54777962-54777981 Msa0077750:CDS 20.0%
!! ATATATATATATATAGGGGA+GGG - chr1_2:54777963-54777982 Msa0077750:CDS 20.0%
!! CTAATTAATAACAAGATCAA+TGG + chr1_2:54778036-54778055 None:intergenic 20.0%
!!! TTGATCTTGTTATTAATTAG+TGG - chr1_2:54778036-54778055 Msa0077750:CDS 20.0%
!!! ATACAATTTTCTCAATTGAA+TGG - chr1_2:54778229-54778248 Msa0077750:intron 20.0%
!! TTATGAATAGAAAACAAAGA+TGG - chr1_2:54778514-54778533 Msa0077750:CDS 20.0%
!! TATATATATATATATGGGGA+GGG + chr1_2:54778781-54778800 None:intergenic 20.0%
!! ATATATATATATATATGGGG+AGG + chr1_2:54778782-54778801 None:intergenic 20.0%
!! TATAGCCAAGTTAAAAAAAT+AGG + chr1_2:54779138-54779157 None:intergenic 20.0%
!!! TTATGAATCCTTTTTCTTAT+AGG - chr1_2:54779328-54779347 Msa0077750:intron 20.0%
!!! TATGAATCCTTTTTCTTATA+GGG - chr1_2:54779329-54779348 Msa0077750:intron 20.0%
!!! TAATTCTATGATTTTCTTTC+TGG - chr1_2:54779444-54779463 Msa0077750:CDS 20.0%
!! TGAGAGAAATTTAAAAAGAT+TGG - chr1_2:54779710-54779729 Msa0077750:CDS 20.0%
!!! TAAGATTTTATGTAAGATGT+TGG - chr1_2:54780153-54780172 Msa0077750:intron 20.0%
!! TACGTACTAATAGAAAATAA+AGG + chr1_2:54780320-54780339 None:intergenic 20.0%
!!! ATTCTTATTTGATATGTTGT+AGG - chr1_2:54780348-54780367 Msa0077750:CDS 20.0%
!!! TTTTTTTTTGTTGCTAAATG+CGG - chr1_2:54780564-54780583 Msa0077750:CDS 20.0%
!! GGAAAAAATATAATCAACAT+AGG + chr1_2:54780597-54780616 None:intergenic 20.0%
!!! TGATTATATTTTTTCCGAAA+AGG - chr1_2:54780601-54780620 Msa0077750:CDS 20.0%
!!! TTTTTTTTTTACTGTCAAAC+TGG - chr1_2:54780637-54780656 Msa0077750:CDS 20.0%
!!! TTTTTCAAAACTTTGAACAA+AGG + chr1_2:54780858-54780877 None:intergenic 20.0%
!! TTTACAATAATCTCTAATCA+TGG - chr1_2:54780955-54780974 Msa0077750:CDS 20.0%
!! TTACAATAATCTCTAATCAT+GGG - chr1_2:54780956-54780975 Msa0077750:CDS 20.0%
!!! TGATTATATTTTTTCCGAAA+AGG - chr1_2:54780601-54780620 Msa0077750:CDS 20.0%
!! ATGTAACATTTAAACAAAAG+AGG + chr1_2:54781828-54781847 None:intergenic 20.0%
!! AAATTCAATATATGGGTTTA+AGG + chr1_2:54782202-54782221 None:intergenic 20.0%
!!! TTAACTGTAAAATCTAAGAT+GGG + chr1_2:54782284-54782303 None:intergenic 20.0%
!! ATTAACTGTAAAATCTAAGA+TGG + chr1_2:54782285-54782304 None:intergenic 20.0%
!! TAATCAATATATGACAAACT+TGG + chr1_2:54783133-54783152 None:intergenic 20.0%
!! AAAAACAAAACTTCAAAAAC+TGG - chr1_2:54783267-54783286 Msa0077750:intron 20.0%
!!! TTTATCTTCAATTAACTTGA+AGG - chr1_2:54783483-54783502 Msa0077750:intron 20.0%
!! ATGTACTATTTGAGAAAAAT+GGG + chr1_2:54783678-54783697 None:intergenic 20.0%
!! TATGTACTATTTGAGAAAAA+TGG + chr1_2:54783679-54783698 None:intergenic 20.0%
!!! GTCATATTTGTTTTAAAAAC+AGG - chr1_2:54783725-54783744 Msa0077750:intron 20.0%
!!! ATAACCTTTTTTGTTTGTTT+TGG - chr1_2:54783949-54783968 Msa0077750:intron 20.0%
!! AATTCCAAAACAAACAAAAA+AGG + chr1_2:54783956-54783975 None:intergenic 20.0%
!! AATTGAATTCCAAACAAATA+CGG + chr1_2:54784160-54784179 None:intergenic 20.0%
!! AAAAAACTTAGATAATAGGT+GGG + chr1_2:54784546-54784565 None:intergenic 20.0%
!! TAAAAAACTTAGATAATAGG+TGG + chr1_2:54784547-54784566 None:intergenic 20.0%
!! CTGTAAAAAACTTAGATAAT+AGG + chr1_2:54784550-54784569 None:intergenic 20.0%
!!! AACAAATTCGCTATTATTTT+AGG + chr1_2:54786104-54786123 None:intergenic 20.0%
!!! AGTCTATAAGTATTGATAAA+GGG + chr1_2:54786174-54786193 None:intergenic 20.0%
!! ATTATGTTCAAAAATAAAGC+AGG + chr1_2:54786237-54786256 None:intergenic 20.0%
!! TTAAATCTGGAAATTAAATC+TGG + chr1_2:54786426-54786445 None:intergenic 20.0%
!! AAGATACTTTCTTACAATAT+TGG + chr1_2:54786478-54786497 None:intergenic 20.0%
!!! GTAAGAAAGTATCTTATTTT+TGG - chr1_2:54786483-54786502 Msa0077750:intron 20.0%
!! CAAGAAAAAATCAATAGTTT+AGG + chr1_2:54787294-54787313 None:intergenic 20.0%
!!! AAACATTGAGATAATTTTGT+GGG + chr1_2:54787583-54787602 None:intergenic 20.0%
!!! AAAACATTGAGATAATTTTG+TGG + chr1_2:54787584-54787603 None:intergenic 20.0%
!!! TATCTCAATGTTTTTCTAAA+TGG - chr1_2:54787590-54787609 Msa0077750:intron 20.0%
!!! AATATAGTTTTAAGCAAATG+AGG + chr1_2:54787617-54787636 None:intergenic 20.0%
!! TTTAGAAACTATTTCAAAGT+AGG - chr1_2:54787779-54787798 Msa0077750:intron 20.0%
!! TTAGAAACTATTTCAAAGTA+GGG - chr1_2:54787780-54787799 Msa0077750:intron 20.0%
!!! AGAATCAATTTTAGTCTTTA+TGG - chr1_2:54787874-54787893 Msa0077750:CDS 20.0%
!!! GATTATGTTAGTTTTCATTT+TGG - chr1_2:54788249-54788268 Msa0077750:intron 20.0%
!! AAATATAATACCAGAAAAAC+AGG + chr1_2:54788281-54788300 None:intergenic 20.0%
!! TTTAAAAATTAATAGTTGGC+AGG + chr1_2:54788348-54788367 None:intergenic 20.0%
!!! TTTCTTTTGAAAATCTATCT+TGG - chr1_2:54788389-54788408 Msa0077750:intron 20.0%
!!! TTCTTTTGAAAATCTATCTT+GGG - chr1_2:54788390-54788409 Msa0077750:intron 20.0%
!! TTGAATATGATTTACAGTTT+CGG + chr1_2:54788974-54788993 None:intergenic 20.0%
!! AAGTAAAAGTTTACATAAGT+TGG + chr1_2:54789440-54789459 None:intergenic 20.0%
!!! ATATTTTTTTTTCTTCCTTC+AGG - chr1_2:54789675-54789694 Msa0077750:intron 20.0%
!! GAACAAAGTAAGAAATTAAA+AGG + chr1_2:54790235-54790254 None:intergenic 20.0%
!! CTTACTTTGTTCAATTATAT+TGG - chr1_2:54790243-54790262 Msa0077750:intron 20.0%
!!! TGAACCAAAAATATGAATTT+TGG - chr1_2:54790529-54790548 Msa0077750:intron 20.0%
!!! TAAGCCAAAATTCATATTTT+TGG + chr1_2:54790536-54790555 None:intergenic 20.0%
!!! GAATAAGATTATGAATCTTT+TGG + chr1_2:54790849-54790868 None:intergenic 20.0%
!! TTATTCAAAATGTATGTGAT+GGG - chr1_2:54790863-54790882 Msa0077750:intron 20.0%
!! AAAATGCAATATATGTCTAA+GGG + chr1_2:54791253-54791272 None:intergenic 20.0%
!!! TTTTTCATAAATACACATCT+TGG - chr1_2:54791368-54791387 Msa0077750:intron 20.0%
!! ATCTTCTAATAATAGATTCA+AGG + chr1_2:54791730-54791749 None:intergenic 20.0%
!!! ACATTATTTTATTACAGGTA+CGG - chr1_2:54792180-54792199 Msa0077750:intron 20.0%
!! AACAAGGAATATAAAACATT+AGG + chr1_2:54792603-54792622 None:intergenic 20.0%
!! TCAAATAACATTATCTAACA+AGG + chr1_2:54792619-54792638 None:intergenic 20.0%
!!! GTATTTTGTTTTTCATTCTT+AGG - chr1_2:54792712-54792731 Msa0077750:intron 20.0%
!!! CATATTCTTTTCTTATTTCT+AGG - chr1_2:54792887-54792906 Msa0077750:CDS 20.0%
!!! TTTTAAAATAAATAGTGCAG+TGG + chr1_2:54793182-54793201 None:intergenic 20.0%
!! AAACAACATGAAACAAATAT+TGG + chr1_2:54793230-54793249 None:intergenic 20.0%
!! ACATATAAAGTAACTTTAGA+TGG + chr1_2:54793310-54793329 None:intergenic 20.0%
!! AACCTACAAAAGAAAATTTA+AGG + chr1_2:54793719-54793738 None:intergenic 20.0%
! ATAATTCCTAAACCTTTCAT+CGG + chr1_2:54775944-54775963 None:intergenic 25.0%
!!! TTCTGGATATTTTAATCTTC+CGG - chr1_2:54776071-54776090 Msa0077750:CDS 25.0%
!! TGATTATGTTTTGTGGTTTT+TGG - chr1_2:54776174-54776193 Msa0077750:intron 25.0%
!!! TTTGATTTGTTATGTGTTTC+AGG - chr1_2:54776204-54776223 Msa0077750:intron 25.0%
! TAGTACAGATACTTAAGATA+CGG - chr1_2:54776300-54776319 Msa0077750:intron 25.0%
!!! TGATTGTTTGTTACTTTCTT+TGG - chr1_2:54776334-54776353 Msa0077750:intron 25.0%
! ATGGTTTCTGATGTATTTAT+TGG - chr1_2:54776374-54776393 Msa0077750:intron 25.0%
!!! GTATTTATTGGTTTCTGTTA+AGG - chr1_2:54776386-54776405 Msa0077750:intron 25.0%
! ATCTTAAACATCTAAACACA+CGG + chr1_2:54776546-54776565 None:intergenic 25.0%
!!! TACATTCTTTGAAGGATTTT+TGG + chr1_2:54776615-54776634 None:intergenic 25.0%
! AATCCTTCAAAGAATGTAAT+TGG - chr1_2:54776617-54776636 Msa0077750:CDS 25.0%
!! AATATATTTGGGGTATCATT+TGG - chr1_2:54776786-54776805 Msa0077750:intron 25.0%
!!! CTTTTGTTTATTTGGTTACT+CGG - chr1_2:54776825-54776844 Msa0077750:intron 25.0%
!!! TTTTGTTTATTTGGTTACTC+GGG - chr1_2:54776826-54776845 Msa0077750:intron 25.0%
! AAAGGCAAATTCATTTCATA+TGG + chr1_2:54776856-54776875 None:intergenic 25.0%
! ACTTCTTAAAAGAAAGGTTT+AGG + chr1_2:54776939-54776958 None:intergenic 25.0%
! AATAGCACTTCTTAAAAGAA+AGG + chr1_2:54776945-54776964 None:intergenic 25.0%
! TCAATTTCAAATATGGAGAA+TGG + chr1_2:54777369-54777388 None:intergenic 25.0%
!! ATTCTCCATATTTGAAATTG+AGG - chr1_2:54777368-54777387 Msa0077750:CDS 25.0%
! GTTATTCTATATCTATCATC+TGG - chr1_2:54777551-54777570 Msa0077750:CDS 25.0%
! GTATTCTTCATTATTCATTC+AGG - chr1_2:54777802-54777821 Msa0077750:CDS 25.0%
! TAACTTTAAACACTTACTCT+TGG + chr1_2:54778744-54778763 None:intergenic 25.0%
! TGAAATTAAGGGTTAAGATT+TGG - chr1_2:54778719-54778738 Msa0077750:intron 25.0%
! TAACTTTAAACACTTACTCT+TGG - chr1_2:54778744-54778763 Msa0077750:intron 25.0%
! AAGATTGATTAAGGCAATAA+GGG + chr1_2:54779030-54779049 None:intergenic 25.0%
!!! TCATGCCTATTTTTTTAACT+TGG - chr1_2:54779130-54779149 Msa0077750:intron 25.0%
!!! TAGTTTCTTTAAAACATCCA+AGG + chr1_2:54779222-54779241 None:intergenic 25.0%
!!! TGGATGTTTTAAAGAAACTA+AGG - chr1_2:54779222-54779241 Msa0077750:intron 25.0%
!!! GGTTTTATTAGAATTGTCTA+AGG - chr1_2:54779362-54779381 Msa0077750:intron 25.0%
! ATTGCATTAACTATATGGTT+TGG + chr1_2:54779842-54779861 None:intergenic 25.0%
! CAACTATTGCATTAACTATA+TGG + chr1_2:54779847-54779866 None:intergenic 25.0%
! GAATGAAAAAAAAAGTAGTG+AGG + chr1_2:54779908-54779927 None:intergenic 25.0%
!! ATTTTATGTAAGATGTTGGA+TGG - chr1_2:54780157-54780176 Msa0077750:intron 25.0%
! AAAAAAAAAAATCAGCCCAT+AGG + chr1_2:54780553-54780572 None:intergenic 25.0%
! TCAGTTCAAATCATTTGAAA+TGG + chr1_2:54780697-54780716 None:intergenic 25.0%
!! TTTTGATAGAAGACTTGATT+TGG - chr1_2:54780803-54780822 Msa0077750:intron 25.0%
!! TAAAGTATCTTCAACAATGT+TGG + chr1_2:54780939-54780958 None:intergenic 25.0%
! TACAATAATCTCTAATCATG+GGG - chr1_2:54780957-54780976 Msa0077750:CDS 25.0%
! TCAGTTCAAATCATTTGAAA+TGG + chr1_2:54780697-54780716 None:intergenic 25.0%
! TTAAAACATGGAATAGGAAT+CGG + chr1_2:54781542-54781561 None:intergenic 25.0%
! CTTATATTGTTATCGTTTAC+CGG + chr1_2:54781899-54781918 None:intergenic 25.0%
!!! GGGAATATGTTTATTTTTCT+CGG - chr1_2:54781986-54782005 Msa0077750:intron 25.0%
! CTCAGCAAAATTCAATATAT+GGG + chr1_2:54782209-54782228 None:intergenic 25.0%
! TCTCAGCAAAATTCAATATA+TGG + chr1_2:54782210-54782229 None:intergenic 25.0%
! TTACAGTTAATTACAAAGAG+AGG - chr1_2:54782294-54782313 Msa0077750:intron 25.0%
!! TTTTTCTTCCATTCTAATGA+AGG + chr1_2:54782325-54782344 None:intergenic 25.0%
! ATTGTTTAGTAACTTCCTTT+GGG + chr1_2:54782509-54782528 None:intergenic 25.0%
! AATTGTTTAGTAACTTCCTT+TGG + chr1_2:54782510-54782529 None:intergenic 25.0%
! AACAATTGACATGTAACATT+AGG - chr1_2:54782523-54782542 Msa0077750:intron 25.0%
! ATTTAGGCCTAAATATATAC+TGG - chr1_2:54782635-54782654 Msa0077750:CDS 25.0%
! TTTAGGCCTAAATATATACT+GGG - chr1_2:54782636-54782655 Msa0077750:CDS 25.0%
!!! TTTTTCAAATTCTCTTATGC+AGG - chr1_2:54782686-54782705 Msa0077750:intron 25.0%
! TACTAGTCAAAGAAATTAAC+TGG - chr1_2:54782986-54783005 Msa0077750:CDS 25.0%
! TGATAATATTGCTGAAGAAA+CGG - chr1_2:54783017-54783036 Msa0077750:CDS 25.0%
! TCAAATTGATGAGATAGTAT+CGG - chr1_2:54783200-54783219 Msa0077750:intron 25.0%
!!! TTTGTTTTTTCAAAGTCTAC+TGG + chr1_2:54783256-54783275 None:intergenic 25.0%
! ATTAACAATTTAGAAGTTCG+TGG + chr1_2:54783391-54783410 None:intergenic 25.0%
! AATTGAAATGTAATGATGAC+TGG + chr1_2:54783419-54783438 None:intergenic 25.0%
! TTAATTGAAGATAAACAACC+AGG + chr1_2:54783478-54783497 None:intergenic 25.0%
! CTTGAAGGTTATCAAAAAAT+TGG - chr1_2:54783498-54783517 Msa0077750:intron 25.0%
!!! TGACTTTCTATTTTGATCAA+AGG - chr1_2:54783767-54783786 Msa0077750:intron 25.0%
!! TTTCTTATTTCTTCACTTTC+TGG - chr1_2:54783920-54783939 Msa0077750:intron 25.0%
!!! TTTGGAATTCAATTTTGTCT+TGG - chr1_2:54784166-54784185 Msa0077750:CDS 25.0%
! ATGTACTCCATATCTTAAAT+GGG - chr1_2:54784604-54784623 Msa0077750:CDS 25.0%
! ATATACAGTTCCTTTGTAAA+TGG - chr1_2:54784672-54784691 Msa0077750:CDS 25.0%
!! TATGCTACTTAATCATATGA+TGG - chr1_2:54785088-54785107 Msa0077750:CDS 25.0%
! AGGTAATAGGATATTATGAT+AGG + chr1_2:54785461-54785480 None:intergenic 25.0%
!! ATATACCTGTTTTGCATATT+TGG + chr1_2:54785484-54785503 None:intergenic 25.0%
!!! ATAAGTTTTAACATGCAAGT+GGG + chr1_2:54786042-54786061 None:intergenic 25.0%
!!! AATAATAGCGAATTTGTTGA+AGG - chr1_2:54786106-54786125 Msa0077750:CDS 25.0%
!!! ATAATAGCGAATTTGTTGAA+GGG - chr1_2:54786107-54786126 Msa0077750:CDS 25.0%
!!! ATAAAGGGGATACATTTTTT+TGG + chr1_2:54786159-54786178 None:intergenic 25.0%
!!! GTCTATAAGTATTGATAAAG+GGG + chr1_2:54786173-54786192 None:intergenic 25.0%
!!! GAGTCTATAAGTATTGATAA+AGG + chr1_2:54786175-54786194 None:intergenic 25.0%
!! AGAAATACTTGAGTTCATTT+TGG - chr1_2:54786278-54786297 Msa0077750:intron 25.0%
!! GAAATACTTGAGTTCATTTT+GGG - chr1_2:54786279-54786298 Msa0077750:intron 25.0%
! ATCAATGCTGTCTAATTTAA+TGG - chr1_2:54786567-54786586 Msa0077750:CDS 25.0%
! TTTCAGTGTTTGAAAATTTC+TGG + chr1_2:54786624-54786643 None:intergenic 25.0%
!! AATTTTCAAACACTGAAACT+AGG - chr1_2:54786626-54786645 Msa0077750:intron 25.0%
! ATCATAATTCAATAGCATTG+TGG + chr1_2:54787220-54787239 None:intergenic 25.0%
! TTAATTGAGAAAAGACATGT+TGG + chr1_2:54787445-54787464 None:intergenic 25.0%
!! AACATGTCTTTTCTCAATTA+AGG - chr1_2:54787444-54787463 Msa0077750:intron 25.0%
! TTAACTACTATAGAAAAGTG+TGG - chr1_2:54787555-54787574 Msa0077750:intron 25.0%
!! GACTAAAATTGATTCTTTCT+GGG + chr1_2:54787870-54787889 None:intergenic 25.0%
!! AGACTAAAATTGATTCTTTC+TGG + chr1_2:54787871-54787890 None:intergenic 25.0%
! AACTATACATCATGAGAAAT+TGG - chr1_2:54788196-54788215 Msa0077750:intron 25.0%
! ATGAAAACTAACATAATCCA+AGG + chr1_2:54788247-54788266 None:intergenic 25.0%
!! TATCAGTTCATTCTTTGAAA+TGG + chr1_2:54788476-54788495 None:intergenic 25.0%
! AAGAATGAACTGATAATCAT+TGG - chr1_2:54788481-54788500 Msa0077750:intron 25.0%
! AATGAACTAAGGATAATTGT+TGG - chr1_2:54788531-54788550 Msa0077750:intron 25.0%
!!! AAGGATAATTGTTGGTTTAA+TGG - chr1_2:54788539-54788558 Msa0077750:intron 25.0%
! CGCTAAGAAGTTTAAATAAA+GGG + chr1_2:54788876-54788895 None:intergenic 25.0%
! TCGCTAAGAAGTTTAAATAA+AGG + chr1_2:54788877-54788896 None:intergenic 25.0%
! ATTGATATTCTTCCAGTTAT+TGG - chr1_2:54789307-54789326 Msa0077750:intron 25.0%
!! ATAAGTTGGAAGATTTAATG+TGG + chr1_2:54789426-54789445 None:intergenic 25.0%
! ATATATCTATGAAAACCTGA+AGG + chr1_2:54789693-54789712 None:intergenic 25.0%
!!! CAATTGTTTTATATCTCCTA+CGG - chr1_2:54789743-54789762 Msa0077750:intron 25.0%
! AGATGCAGATCATAAAAAAA+TGG + chr1_2:54789805-54789824 None:intergenic 25.0%
! GAACAACAATATAAGTAATG+AGG + chr1_2:54789879-54789898 None:intergenic 25.0%
!! TAACATTTTGTACTATAGAG+TGG - chr1_2:54789957-54789976 Msa0077750:CDS 25.0%
!! AACATTTTGTACTATAGAGT+GGG - chr1_2:54789958-54789977 Msa0077750:CDS 25.0%
! TCATAAAAGGAAACTAAAGA+AGG + chr1_2:54790037-54790056 None:intergenic 25.0%
! TAAGCAAAACTTTGTTCTTT+AGG - chr1_2:54790447-54790466 Msa0077750:intron 25.0%
! CATTCAATAAATGATGTATG+CGG - chr1_2:54790472-54790491 Msa0077750:intron 25.0%
!! AAGATTATGAATCTTTTGGT+TGG + chr1_2:54790845-54790864 None:intergenic 25.0%
! CTTATTCAAAATGTATGTGA+TGG - chr1_2:54790862-54790881 Msa0077750:intron 25.0%
! TATTCAAAATGTATGTGATG+GGG - chr1_2:54790864-54790883 Msa0077750:intron 25.0%
!!! CAATATTTTGAGATAATACG+TGG - chr1_2:54791167-54791186 Msa0077750:intron 25.0%
! GAAAATGCAATATATGTCTA+AGG + chr1_2:54791254-54791273 None:intergenic 25.0%
! CATTGGATCTACTATATATA+GGG - chr1_2:54791326-54791345 Msa0077750:intron 25.0%
! TGGTAAACAAATTAAGAGTT+TGG - chr1_2:54791388-54791407 Msa0077750:intron 25.0%
!! TTGCTAAAAGTATGTATTGT+TGG - chr1_2:54792116-54792135 Msa0077750:intron 25.0%
!! TAAAAGTATGTATTGTTGGA+TGG - chr1_2:54792120-54792139 Msa0077750:intron 25.0%
! AACAATTGTGTTTGATATGT+TGG - chr1_2:54792265-54792284 Msa0077750:intron 25.0%
!!! AAGGATTTTTGACTTTTGTT+TGG - chr1_2:54792337-54792356 Msa0077750:intron 25.0%
!!! AGTTCAAAACATTGATTTAG+TGG - chr1_2:54792391-54792410 Msa0077750:intron 25.0%
! TCAATACTCCTTATAAAAAG+AGG + chr1_2:54792479-54792498 None:intergenic 25.0%
!!! TTTTTATAAGGAGTATTGAG+TGG - chr1_2:54792480-54792499 Msa0077750:intron 25.0%
!!! TTTTATAAGGAGTATTGAGT+GGG - chr1_2:54792481-54792500 Msa0077750:intron 25.0%
!! AAAAAGAAGGCTAAGATTTT+GGG - chr1_2:54793006-54793025 Msa0077750:intron 25.0%
! TAAAGTAACTTTAGATGGAA+TGG + chr1_2:54793305-54793324 None:intergenic 25.0%
! ATATCACAAATTATACTTCG+CGG + chr1_2:54793614-54793633 None:intergenic 25.0%
! TTACTCAAAATAGGAGAAAA+AGG + chr1_2:54793640-54793659 None:intergenic 25.0%
!! TGCCTTAAATTTTCTTTTGT+AGG - chr1_2:54793714-54793733 Msa0077750:intron 25.0%
! CTAGAATTGTGTAATCATAT+AGG - chr1_2:54793986-54794005 Msa0077750:CDS 25.0%
! AACATATTATGGCCATTTAA+AGG - chr1_2:54794031-54794050 Msa0077750:five_prime_UTR 25.0%
! ACATATTATGGCCATTTAAA+GGG - chr1_2:54794032-54794051 Msa0077750:five_prime_UTR 25.0%
! ATCTCTGATTCCATTTAAAA+AGG + chr1_2:54794165-54794184 None:intergenic 25.0%
AAGGAAGAATTGAGAAGTTA+GGG + chr1_2:54775540-54775559 None:intergenic 30.0%
TCTATCCAATTCTTTACTCT+GGG + chr1_2:54775986-54776005 None:intergenic 30.0%
AGAGTAAAGAATTGGATAGA+GGG - chr1_2:54775986-54776005 Msa0077750:CDS 30.0%
! CTGTATTTGAAACTACTTTC+TGG - chr1_2:54776054-54776073 Msa0077750:CDS 30.0%
! TGTATGGTGATTATGTTTTG+TGG - chr1_2:54776167-54776186 Msa0077750:intron 30.0%
!! TATTGGTTTCTGTTAAGGAA+TGG - chr1_2:54776391-54776410 Msa0077750:intron 30.0%
TTCTGTTAAGGAATGGTATA+TGG - chr1_2:54776398-54776417 Msa0077750:intron 30.0%
TCTGTTAAGGAATGGTATAT+GGG - chr1_2:54776399-54776418 Msa0077750:intron 30.0%
TCTTAAACATCTAAACACAC+GGG + chr1_2:54776545-54776564 None:intergenic 30.0%
!! TTCTTTGAAGGATTTTTGGA+TGG + chr1_2:54776611-54776630 None:intergenic 30.0%
AAGCCAATTACATTCTTTGA+AGG + chr1_2:54776623-54776642 None:intergenic 30.0%
ATATATCCTTTCGTGAATTC+TGG - chr1_2:54776704-54776723 Msa0077750:intron 30.0%
TATATCCTTTCGTGAATTCT+GGG - chr1_2:54776705-54776724 Msa0077750:intron 30.0%
CGAGTAACCAAATAAACAAA+AGG + chr1_2:54776827-54776846 None:intergenic 30.0%
TAATTCTCTTGTAGCTAAGT+TGG - chr1_2:54776913-54776932 Msa0077750:intron 30.0%
!!! CTTTTAAGAAGTGCTATTCA+CGG - chr1_2:54776947-54776966 Msa0077750:intron 30.0%
TGATTCTACGGTTGATTATA+TGG - chr1_2:54777030-54777049 Msa0077750:CDS 30.0%
! CTTGTTTGATATTGCTATTC+CGG + chr1_2:54777075-54777094 None:intergenic 30.0%
!! TCTGTACAATTTTGCTATGA+AGG - chr1_2:54777160-54777179 Msa0077750:CDS 30.0%
GACAATGCATTATATATGCA+AGG - chr1_2:54777300-54777319 Msa0077750:CDS 30.0%
!!! GACATCTTTTTTTTTTGTGG+TGG + chr1_2:54777345-54777364 None:intergenic 30.0%
!!! GGTGACATCTTTTTTTTTTG+TGG + chr1_2:54777348-54777367 None:intergenic 30.0%
TTCCTCCTCAATTTCAAATA+TGG + chr1_2:54777376-54777395 None:intergenic 30.0%
TTCTCAAACACACATGTTTA+AGG - chr1_2:54777451-54777470 Msa0077750:intron 30.0%
!!! ATATCTATCATCTGGCTTTT+TGG - chr1_2:54777559-54777578 Msa0077750:CDS 30.0%
AAGGTCTATGTTAGTAAACT+TGG - chr1_2:54777614-54777633 Msa0077750:CDS 30.0%
! TAAACTATAAATTTGAGGCC+AGG + chr1_2:54777765-54777784 None:intergenic 30.0%
ACAGAATCTAAGAACAAGAT+TGG + chr1_2:54777832-54777851 None:intergenic 30.0%
CAAGATCAATGGTCAATATT+AGG + chr1_2:54778025-54778044 None:intergenic 30.0%
TTCCAAAAGATTTCATGTCT+CGG + chr1_2:54778133-54778152 None:intergenic 30.0%
!! ACATGAAATCTTTTGGAAGA+TGG - chr1_2:54778135-54778154 Msa0077750:intron 30.0%
TTCATGATCATTGATCGAAA+TGG + chr1_2:54778202-54778221 None:intergenic 30.0%
CTAGTTAGCAAATTCTTAGA+AGG + chr1_2:54778397-54778416 None:intergenic 30.0%
!! TCTAAGAATTTGCTAACTAG+AGG - chr1_2:54778397-54778416 Msa0077750:intron 30.0%
TGCTGAGATAATATTGATGA+AGG - chr1_2:54778582-54778601 Msa0077750:CDS 30.0%
! CCATGAGGATCTAAAATAAA+TGG + chr1_2:54778626-54778645 None:intergenic 30.0%
!!! CCATTTATTTTAGATCCTCA+TGG - chr1_2:54778623-54778642 Msa0077750:CDS 30.0%
AGTAGAAAAAGGCTTATGAT+AGG - chr1_2:54778660-54778679 Msa0077750:CDS 30.0%
GTAGAAAAAGGCTTATGATA+GGG - chr1_2:54778661-54778680 Msa0077750:CDS 30.0%
AATGACAATAGTTCAACAGA+AGG + chr1_2:54778864-54778883 None:intergenic 30.0%
! TGTTGAACTATTGTCATTTC+AGG - chr1_2:54778866-54778885 Msa0077750:intron 30.0%
ATCAAACCATTCAAAAGTGA+TGG + chr1_2:54778942-54778961 None:intergenic 30.0%
!! CTAAAGATCTTCATTGGTTT+CGG - chr1_2:54779000-54779019 Msa0077750:intron 30.0%
CAAGATTGATTAAGGCAATA+AGG + chr1_2:54779031-54779050 None:intergenic 30.0%
TGACAGAACAAGAAGAAAAT+AGG + chr1_2:54779113-54779132 None:intergenic 30.0%
!! AAAGTTTCTAGTTGTTCTGT+TGG - chr1_2:54779398-54779417 Msa0077750:intron 30.0%
TTATCACCTGCAGATAATTA+GGG + chr1_2:54779427-54779446 None:intergenic 30.0%
ATTATCACCTGCAGATAATT+AGG + chr1_2:54779428-54779447 None:intergenic 30.0%
TATGATCATTTGCAGTTCTA+AGG - chr1_2:54779513-54779532 Msa0077750:CDS 30.0%
TGATGAACAGAGTCATTTAT+GGG + chr1_2:54779583-54779602 None:intergenic 30.0%
ATGATGAACAGAGTCATTTA+TGG + chr1_2:54779584-54779603 None:intergenic 30.0%
!! ATAGTTTCACACAAGTTGAT+AGG + chr1_2:54779621-54779640 None:intergenic 30.0%
GTGAAACTATCAGAAAAAGT+TGG - chr1_2:54779631-54779650 Msa0077750:CDS 30.0%
TCATTCAAATGTCAATTAGC+TGG - chr1_2:54779922-54779941 Msa0077750:intron 30.0%
ATATCTCGATGTCAAAAGTT+TGG - chr1_2:54780200-54780219 Msa0077750:intron 30.0%
! CAGTATAAACGTACAGTTTT+GGG + chr1_2:54780480-54780499 None:intergenic 30.0%
! TCAGTATAAACGTACAGTTT+TGG + chr1_2:54780481-54780500 None:intergenic 30.0%
! AAAATGTGAAGCAACCTTTT+CGG + chr1_2:54780618-54780637 None:intergenic 30.0%
TGAAATGGAACTCAACATAT+AGG + chr1_2:54780682-54780701 None:intergenic 30.0%
! AAAATGTGAAGCAACCTTTT+CGG + chr1_2:54780618-54780637 None:intergenic 30.0%
TGAAATGGAACTCAACATAT+AGG + chr1_2:54780682-54780701 None:intergenic 30.0%
TGATAGAAGACTTGATTATG+TGG - chr1_2:54781214-54781233 Msa0077750:intron 30.0%
ATTATGTGGTGTACAAAGTA+GGG - chr1_2:54781228-54781247 Msa0077750:intron 30.0%
ATGGGGTAATCTTCATAAAT+TGG - chr1_2:54781402-54781421 Msa0077750:intron 30.0%
TCGGTTATGCACAATAATAA+TGG + chr1_2:54781523-54781542 None:intergenic 30.0%
AACGGTATAGTTAAATGGTT+GGG + chr1_2:54781568-54781587 None:intergenic 30.0%
!! ACAAAACATTTTGGGTAGAA+CGG + chr1_2:54781586-54781605 None:intergenic 30.0%
! CCTGATCAACAAAACATTTT+GGG + chr1_2:54781594-54781613 None:intergenic 30.0%
!! CCAAAATGTTTTGTTGATCA+GGG - chr1_2:54781592-54781611 Msa0077750:intron 30.0%
ATCATCAAACTGTCTCAATA+TGG + chr1_2:54781638-54781657 None:intergenic 30.0%
TTGGAACATAACATGTATGT+TGG + chr1_2:54781862-54781881 None:intergenic 30.0%
GTTATGTTCCAAAGTGAATA+TGG - chr1_2:54781870-54781889 Msa0077750:intron 30.0%
! ATGGGTTTAATTTAACACCA+TGG + chr1_2:54782266-54782285 None:intergenic 30.0%
GCTGAGAAATAAATGATTGT+TGG - chr1_2:54782410-54782429 Msa0077750:intron 30.0%
AATAAATGATTGTTGGACCA+AGG - chr1_2:54782417-54782436 Msa0077750:intron 30.0%
!! CTAAATCAAATTCTAAGACG+AGG + chr1_2:54782621-54782640 None:intergenic 30.0%
! CTCGTCTTAGAATTTGATTT+AGG - chr1_2:54782619-54782638 Msa0077750:CDS 30.0%
TAAATCACCAATTGTATGCA+GGG + chr1_2:54782666-54782685 None:intergenic 30.0%
ATAAATCACCAATTGTATGC+AGG + chr1_2:54782667-54782686 None:intergenic 30.0%
!! AAGGAGTAATGGATAAATCA+TGG + chr1_2:54782810-54782829 None:intergenic 30.0%
! AAATCTTTCTTTTCAACCTG+TGG + chr1_2:54782839-54782858 None:intergenic 30.0%
TTCAGATTTATGCTTTGTCT+TGG - chr1_2:54782900-54782919 Msa0077750:intron 30.0%
GGACTTAAATTTAAAAGCTC+TGG - chr1_2:54782963-54782982 Msa0077750:CDS 30.0%
!! ACTTTTTGAAGAACAGACAT+TGG + chr1_2:54783172-54783191 None:intergenic 30.0%
! GACTGATTCTATATTCATCT+CGG + chr1_2:54783226-54783245 None:intergenic 30.0%
AGTCAAACTTATAGTATGTC+AGG + chr1_2:54783310-54783329 None:intergenic 30.0%
CATACTATAAGTTTGACTGT+AGG - chr1_2:54783312-54783331 Msa0077750:CDS 30.0%
TATAAGTTTGACTGTAGGAA+TGG - chr1_2:54783317-54783336 Msa0077750:CDS 30.0%
AAGGTTATCAAAAAATTGGC+TGG - chr1_2:54783502-54783521 Msa0077750:intron 30.0%
AATCGATATTATCTTCATGG+TGG + chr1_2:54783540-54783559 None:intergenic 30.0%
ACCATGAAGATAATATCGAT+TGG - chr1_2:54783539-54783558 Msa0077750:intron 30.0%
ACCAATCGATATTATCTTCA+TGG + chr1_2:54783543-54783562 None:intergenic 30.0%
TACATAACGACACAAACAAA+TGG - chr1_2:54783693-54783712 Msa0077750:intron 30.0%
!! CACAAACAAATGGATTAGTT+AGG - chr1_2:54783703-54783722 Msa0077750:intron 30.0%
! TGAAGTGTTAGACTTAAACT+CGG - chr1_2:54783992-54784011 Msa0077750:intron 30.0%
ACCTCTAAATGCAAAAGTTA+TGG - chr1_2:54784058-54784077 Msa0077750:intron 30.0%
!! AAGTTATGGCTTGCATATTT+TGG - chr1_2:54784072-54784091 Msa0077750:intron 30.0%
TAATTCCTTCCGTATTTGTT+TGG - chr1_2:54784148-54784167 Msa0077750:CDS 30.0%
CAACATTTGAAGAACATAAG+AGG + chr1_2:54784357-54784376 None:intergenic 30.0%
! TTTTTCGCTTTGTCAAAGTT+CGG - chr1_2:54784470-54784489 Msa0077750:intron 30.0%
!!! TCTAAGTTTTTTACAGACGA+AGG - chr1_2:54784554-54784573 Msa0077750:intron 30.0%
GATGTACTCCATATCTTAAA+TGG - chr1_2:54784603-54784622 Msa0077750:CDS 30.0%
!!! TTATGTTGCTCTTATTTTCC+AGG - chr1_2:54784763-54784782 Msa0077750:intron 30.0%
TAATTATAGAACATGTCACC+TGG + chr1_2:54784784-54784803 None:intergenic 30.0%
! TTTTGAATCTTTTCCTGTGT+AGG - chr1_2:54784846-54784865 Msa0077750:intron 30.0%
! TGGATGTCAAACTGATATTT+TGG - chr1_2:54784935-54784954 Msa0077750:intron 30.0%
TATATATGGTTGTGGACAAA+TGG - chr1_2:54785045-54785064 Msa0077750:CDS 30.0%
!! TCTTGATTTTTGAGGAAATC+TGG - chr1_2:54785117-54785136 Msa0077750:CDS 30.0%
AAATTCTTTGCAGTCTGTAA+GGG - chr1_2:54785170-54785189 Msa0077750:intron 30.0%
TAACTTAACAATACACTCCA+TGG + chr1_2:54785202-54785221 None:intergenic 30.0%
TTTGCATATTTGGAGGTAAT+AGG + chr1_2:54785474-54785493 None:intergenic 30.0%
ATAGTTGTGTTGTGATAAAG+TGG + chr1_2:54785539-54785558 None:intergenic 30.0%
AGATCTTTCAAATGTGTAGA+GGG - chr1_2:54785604-54785623 Msa0077750:intron 30.0%
! TTGCTAAGAAAGTACAGATT+AGG - chr1_2:54785729-54785748 Msa0077750:CDS 30.0%
! TGCTAAGAAAGTACAGATTA+GGG - chr1_2:54785730-54785749 Msa0077750:CDS 30.0%
AAAGTACAGATTAGGGTTTA+GGG - chr1_2:54785737-54785756 Msa0077750:CDS 30.0%
!! GATAAGTTTTAACATGCAAG+TGG + chr1_2:54786043-54786062 None:intergenic 30.0%
TTGCATGTTAAAACTTATCG+TGG - chr1_2:54786044-54786063 Msa0077750:CDS 30.0%
!!! AGTTCATTTTGGGTTATACT+GGG - chr1_2:54786289-54786308 Msa0077750:intron 30.0%
TCTGGAAATTAAATCTGGAA+TGG + chr1_2:54786421-54786440 None:intergenic 30.0%
ACACACTAAGCTATTAAATC+TGG + chr1_2:54786439-54786458 None:intergenic 30.0%
AGATTTAATAGCTTAGTGTG+TGG - chr1_2:54786438-54786457 Msa0077750:intron 30.0%
GATTTAATAGCTTAGTGTGT+GGG - chr1_2:54786439-54786458 Msa0077750:intron 30.0%
!!! TCTTATTTTTGGGCATTCTA+TGG - chr1_2:54786494-54786513 Msa0077750:intron 30.0%
!!! TTGATGATATTTTAGGATGC+CGG + chr1_2:54786552-54786571 None:intergenic 30.0%
!!! GACAGCATTGATGATATTTT+AGG + chr1_2:54786559-54786578 None:intergenic 30.0%
GAGCGATACTATAATAAACA+CGG - chr1_2:54786589-54786608 Msa0077750:CDS 30.0%
TCAGAGCTAAGACATAATAT+TGG + chr1_2:54786684-54786703 None:intergenic 30.0%
AAATTCAAACCAACAAGCAA+GGG + chr1_2:54786859-54786878 None:intergenic 30.0%
TAAATTCAAACCAACAAGCA+AGG + chr1_2:54786860-54786879 None:intergenic 30.0%
TGGTTTGAATTTACTAACCT+TGG - chr1_2:54786867-54786886 Msa0077750:CDS 30.0%
GCTTAATAGTCAATTCTACA+CGG - chr1_2:54786968-54786987 Msa0077750:intron 30.0%
CTTAATAGTCAATTCTACAC+GGG - chr1_2:54786969-54786988 Msa0077750:intron 30.0%
TTAATAGTCAATTCTACACG+GGG - chr1_2:54786970-54786989 Msa0077750:intron 30.0%
!!! TTGATTTTTTCTTGCATGTC+AGG - chr1_2:54787300-54787319 Msa0077750:intron 30.0%
! AAATGTGAGTTTCTTGCTTT+TGG - chr1_2:54787408-54787427 Msa0077750:intron 30.0%
!! CTTTTGTTTGTTTTCCTCTT+CGG - chr1_2:54787469-54787488 Msa0077750:intron 30.0%
CCACTAAAGAAATACAAAAC+AGG + chr1_2:54787497-54787516 None:intergenic 30.0%
! CCTGTTTTGTATTTCTTTAG+TGG - chr1_2:54787494-54787513 Msa0077750:intron 30.0%
!!! TCTGCAATTGGCTTATTTTA+GGG + chr1_2:54787669-54787688 None:intergenic 30.0%
ATGCTTGATCTACAAATTGA+AGG + chr1_2:54787760-54787779 None:intergenic 30.0%
ACTAGAAAAGGAAATTGATC+AGG + chr1_2:54787906-54787925 None:intergenic 30.0%
TCTGACAAATCAATTGACTA+TGG - chr1_2:54788034-54788053 Msa0077750:intron 30.0%
! TTCCAAATATGTTTTCGTAG+AGG - chr1_2:54788068-54788087 Msa0077750:intron 30.0%
TTCCTCTACGAAAACATATT+TGG + chr1_2:54788073-54788092 None:intergenic 30.0%
CATGAAATGTGAAAATATGC+CGG - chr1_2:54788138-54788157 Msa0077750:intron 30.0%
ATGAAATGTGAAAATATGCC+GGG - chr1_2:54788139-54788158 Msa0077750:intron 30.0%
! CCTTAGTTCATTCTTTGAAA+TGG + chr1_2:54788523-54788542 None:intergenic 30.0%
CCATTTCAAAGAATGAACTA+AGG - chr1_2:54788520-54788539 Msa0077750:intron 30.0%
CAGATAGATTTCAAAACTGT+TGG - chr1_2:54788567-54788586 Msa0077750:intron 30.0%
CATATGCAGAATAGATAATC+TGG - chr1_2:54788692-54788711 Msa0077750:intron 30.0%
CAGTAACAAAACATCAAGAA+GGG + chr1_2:54788733-54788752 None:intergenic 30.0%
TCAGTAACAAAACATCAAGA+AGG + chr1_2:54788734-54788753 None:intergenic 30.0%
TGAAGAAAGACATAACAAAC+AGG - chr1_2:54788751-54788770 Msa0077750:intron 30.0%
!! CGAAGTATTTTCAGAAGAAT+GGG - chr1_2:54788894-54788913 Msa0077750:intron 30.0%
! ATTAATTTTTCCATCGTGAC+AGG - chr1_2:54789144-54789163 Msa0077750:intron 30.0%
CAGAAAGCAGAGAAAATATA+TGG + chr1_2:54789246-54789265 None:intergenic 30.0%
!! TCTTACCAGAAAAAGTGTTT+GGG - chr1_2:54789278-54789297 Msa0077750:intron 30.0%
! AATCCTTGATTTTCATGCTT+GGG - chr1_2:54789399-54789418 Msa0077750:CDS 30.0%
TCATTCAAAGCATGTATTTG+AGG - chr1_2:54789539-54789558 Msa0077750:intron 30.0%
!! AATCATGTATAAAGTACCGT+AGG + chr1_2:54789762-54789781 None:intergenic 30.0%
AATGGTGAAGTTACAATACT+AGG + chr1_2:54789787-54789806 None:intergenic 30.0%
TTATGATCTGCATCTTACAA+TGG - chr1_2:54789810-54789829 Msa0077750:intron 30.0%
! GTACAAAATGTTAAAGCATC+TGG + chr1_2:54789950-54789969 None:intergenic 30.0%
AACAGTATACAAGTATGACT+TGG - chr1_2:54790008-54790027 Msa0077750:CDS 30.0%
ATTTCCTCTCTGTTCATAAA+AGG + chr1_2:54790050-54790069 None:intergenic 30.0%
! TCTAGTTTGAACAACAATTC+AGG + chr1_2:54790145-54790164 None:intergenic 30.0%
! TTGTTGTTCAAACTAGAATC+AGG - chr1_2:54790148-54790167 Msa0077750:intron 30.0%
GAACTTTGTTGCATTATTTG+TGG + chr1_2:54790208-54790227 None:intergenic 30.0%
TATTAATGCTAAAGCAGTCT+TGG - chr1_2:54790607-54790626 Msa0077750:CDS 30.0%
GAATAAGATTGTGATATCAG+TGG - chr1_2:54790736-54790755 Msa0077750:intron 30.0%
TCTTGTAGATGCAAGAAAAA+AGG - chr1_2:54790943-54790962 Msa0077750:intron 30.0%
TAAATTTCTCTGTCATTGTG+AGG - chr1_2:54790969-54790988 Msa0077750:intron 30.0%
TGTTGTGAGGAATATAACAA+TGG - chr1_2:54791018-54791037 Msa0077750:intron 30.0%
GATCATTCAGATAAAGATGT+TGG - chr1_2:54791085-54791104 Msa0077750:intron 30.0%
AGATAAAGATGTTGGAGAAA+AGG - chr1_2:54791093-54791112 Msa0077750:intron 30.0%
! ACATATTTTACCTATGCCAT+TGG - chr1_2:54791309-54791328 Msa0077750:intron 30.0%
CCTATATATAGTAGATCCAA+TGG + chr1_2:54791328-54791347 None:intergenic 30.0%
CCATTGGATCTACTATATAT+AGG - chr1_2:54791325-54791344 Msa0077750:intron 30.0%
AACAAGAACAGAAACAAGAT+GGG + chr1_2:54791927-54791946 None:intergenic 30.0%
TAACAAGAACAGAAACAAGA+TGG + chr1_2:54791928-54791947 None:intergenic 30.0%
! TGTTTCTGTTCTTGTTACTT+TGG - chr1_2:54791931-54791950 Msa0077750:intron 30.0%
AAAAAATATCATGGAGCTTC+TGG - chr1_2:54791997-54792016 Msa0077750:intron 30.0%
! GTTGGGTATATTTCTAACAA+TGG + chr1_2:54792218-54792237 None:intergenic 30.0%
GATATGTTGGCAACATTTAT+TGG - chr1_2:54792278-54792297 Msa0077750:intron 30.0%
AAAAGTCAAAAATCCTTCCA+TGG + chr1_2:54792334-54792353 None:intergenic 30.0%
!! TCAATGTTTTGAACTGAATG+AGG + chr1_2:54792386-54792405 None:intergenic 30.0%
!! AACATTGATTTAGTGGAAGA+AGG - chr1_2:54792398-54792417 Msa0077750:intron 30.0%
! TGTTCAAGCCTCTTTTTATA+AGG - chr1_2:54792468-54792487 Msa0077750:intron 30.0%
! AGTCAAAAGACACTTTGTTT+AGG - chr1_2:54792666-54792685 Msa0077750:intron 30.0%
! CTAAGCAAGTATTTGAAGTA+AGG + chr1_2:54792925-54792944 None:intergenic 30.0%
! GACTCGAACTAAACATTTTA+AGG + chr1_2:54792981-54793000 None:intergenic 30.0%
! GAAAAAGAAGGCTAAGATTT+TGG - chr1_2:54793005-54793024 Msa0077750:intron 30.0%
AAAAATTCACTCGATGAAAC+GGG + chr1_2:54793259-54793278 None:intergenic 30.0%
CAAAAATTCACTCGATGAAA+CGG + chr1_2:54793260-54793279 None:intergenic 30.0%
!! AGATCAAGTTGAGAAACAAT+AGG + chr1_2:54793462-54793481 None:intergenic 30.0%
! ACTCAAGTGTTACTCAAAAT+AGG + chr1_2:54793649-54793668 None:intergenic 30.0%
AAAAATTTGTAAGCTGCAAG+AGG + chr1_2:54793694-54793713 None:intergenic 30.0%
!! CTTCTTTCAAGTTATCTACA+AGG + chr1_2:54793807-54793826 None:intergenic 30.0%
TTCAACGAATCTAACATCAT+AGG + chr1_2:54793966-54793985 None:intergenic 30.0%
GTAGACCAATGAACATATTA+TGG - chr1_2:54794020-54794039 Msa0077750:exon 30.0%
AATGGCCATAATATGTTCAT+TGG + chr1_2:54794028-54794047 None:intergenic 30.0%
! AAGCGTGAATCCTTTTTAAA+TGG - chr1_2:54794152-54794171 Msa0077750:five_prime_UTR 30.0%
ATAGAGGAAATTTCAGTTGG+CGG - chr1_2:54775405-54775424 Msa0077750:three_prime_UTR 35.0%
GAATTGAGAAGTTAGGGTTA+GGG + chr1_2:54775534-54775553 None:intergenic 35.0%
AGAATTGAGAAGTTAGGGTT+AGG + chr1_2:54775535-54775554 None:intergenic 35.0%
GAAGGAAGAATTGAGAAGTT+AGG + chr1_2:54775541-54775560 None:intergenic 35.0%
! TTGCTAGAATTTTGCGATGA+AGG + chr1_2:54775559-54775578 None:intergenic 35.0%
TCATCGCAAAATTCTAGCAA+TGG - chr1_2:54775559-54775578 Msa0077750:three_prime_UTR 35.0%
TTAGGATCGAACAAGATAGA+AGG + chr1_2:54775668-54775687 None:intergenic 35.0%
!!! TGAGTTTTTGGTTGTGTTTC+AGG - chr1_2:54775898-54775917 Msa0077750:intron 35.0%
!! TTTTGGTTGTGTTTCAGGAT+TGG - chr1_2:54775903-54775922 Msa0077750:intron 35.0%
CTATCCAATTCTTTACTCTG+GGG + chr1_2:54775985-54776004 None:intergenic 35.0%
CTCTATCCAATTCTTTACTC+TGG + chr1_2:54775987-54776006 None:intergenic 35.0%
CAGAGTAAAGAATTGGATAG+AGG - chr1_2:54775985-54776004 Msa0077750:CDS 35.0%
GGTTGTGTTGTGAATTGTAA+TGG - chr1_2:54776355-54776374 Msa0077750:intron 35.0%
GGTATATGGGAGTTTCTTAA+AGG - chr1_2:54776412-54776431 Msa0077750:intron 35.0%
! TCTTAAAGGTGTGAAAGACT+CGG - chr1_2:54776426-54776445 Msa0077750:intron 35.0%
!! TGCTGTTGTTGTTGAAGTTT+TGG - chr1_2:54776649-54776668 Msa0077750:CDS 35.0%
!! GCTGTTGTTGTTGAAGTTTT+GGG - chr1_2:54776650-54776669 Msa0077750:CDS 35.0%
TCTGAAAGATCCTTCTTATC+AGG + chr1_2:54776737-54776756 None:intergenic 35.0%
! ATATTTGGGGTATCATTTGG+TGG - chr1_2:54776789-54776808 Msa0077750:intron 35.0%
!! GTGACGACCTTTTGTTTATT+TGG - chr1_2:54776817-54776836 Msa0077750:intron 35.0%
TAAATGGATCTTGACATGAG+GGG + chr1_2:54776882-54776901 None:intergenic 35.0%
GTAAATGGATCTTGACATGA+GGG + chr1_2:54776883-54776902 None:intergenic 35.0%
TGTAAATGGATCTTGACATG+AGG + chr1_2:54776884-54776903 None:intergenic 35.0%
AATAACCAAATCCACATAGC+TGG - chr1_2:54777100-54777119 Msa0077750:CDS 35.0%
CAATAAAACAACAACCACTC+AGG + chr1_2:54777131-54777150 None:intergenic 35.0%
TGCATTATATATGCAAGGTC+CGG - chr1_2:54777305-54777324 Msa0077750:CDS 35.0%
!!! TCTTTTTTTTTTGTGGTGGC+CGG + chr1_2:54777341-54777360 None:intergenic 35.0%
! CTCCATATTTGAAATTGAGG+AGG - chr1_2:54777371-54777390 Msa0077750:CDS 35.0%
!! TTTGAGAAACAGTTGGTTTG+TGG + chr1_2:54777439-54777458 None:intergenic 35.0%
ATGTGTGTTTGAGAAACAGT+TGG + chr1_2:54777446-54777465 None:intergenic 35.0%
TGTTCTTTGGTCTATTTGAC+AGG + chr1_2:54777504-54777523 None:intergenic 35.0%
ACACAGTGAATGATGTTCTT+TGG + chr1_2:54777517-54777536 None:intergenic 35.0%
CTAACATAGACCTTCCTAAT+GGG + chr1_2:54777608-54777627 None:intergenic 35.0%
ACTAACATAGACCTTCCTAA+TGG + chr1_2:54777609-54777628 None:intergenic 35.0%
GTCTATGTTAGTAAACTTGG+AGG - chr1_2:54777617-54777636 Msa0077750:CDS 35.0%
! AGTAAACTTGGAGGTATAGT+TGG - chr1_2:54777626-54777645 Msa0077750:CDS 35.0%
! GTAAACTTGGAGGTATAGTT+GGG - chr1_2:54777627-54777646 Msa0077750:CDS 35.0%
ATACATGTTCAGTTATAGGG+AGG - chr1_2:54777674-54777693 Msa0077750:CDS 35.0%
TACATGTTCAGTTATAGGGA+GGG - chr1_2:54777675-54777694 Msa0077750:CDS 35.0%
TGTGAAAAGGGGAATAAAAG+AGG - chr1_2:54777701-54777720 Msa0077750:CDS 35.0%
!!! GATAGTTTTGAGATAGTGTG+TGG + chr1_2:54778098-54778117 None:intergenic 35.0%
! ATCCGAGACATGAAATCTTT+TGG - chr1_2:54778128-54778147 Msa0077750:intron 35.0%
!! TGAAATCTTTTGGAAGATGG+AGG - chr1_2:54778138-54778157 Msa0077750:intron 35.0%
! ATTTGCCATTTCACCAACAT+AGG - chr1_2:54778310-54778329 Msa0077750:intron 35.0%
! TTTGCCATTTCACCAACATA+GGG - chr1_2:54778311-54778330 Msa0077750:intron 35.0%
! TGTTTGTTAGTACCCTATGT+TGG + chr1_2:54778326-54778345 None:intergenic 35.0%
! GCAGCTTTGTATGTGTTAAT+TGG + chr1_2:54778361-54778380 None:intergenic 35.0%
AGCAAATTCTTAGAAGGTGA+AGG + chr1_2:54778391-54778410 None:intergenic 35.0%
!! TTGATGATAGTTTGCTTGCT+TGG - chr1_2:54778897-54778916 Msa0077750:intron 35.0%
!! TTAGCTCCATCACTTTTGAA+TGG - chr1_2:54778933-54778952 Msa0077750:intron 35.0%
TACCTGGACAAGATTGATTA+AGG + chr1_2:54779039-54779058 None:intergenic 35.0%
!! TGGAAGTGTGTCAACATTTT+GGG + chr1_2:54779192-54779211 None:intergenic 35.0%
!! TTGGAAGTGTGTCAACATTT+TGG + chr1_2:54779193-54779212 None:intergenic 35.0%
! TCAAACTGCTCAACTTTTTG+AGG - chr1_2:54779254-54779273 Msa0077750:intron 35.0%
GGCAAATCCCTATAAGAAAA+AGG + chr1_2:54779339-54779358 None:intergenic 35.0%
! TTTTCTTATAGGGATTTGCC+TGG - chr1_2:54779339-54779358 Msa0077750:intron 35.0%
TTTCTTATAGGGATTTGCCT+GGG - chr1_2:54779340-54779359 Msa0077750:intron 35.0%
GACAATTCTAATAAAACCCC+AGG + chr1_2:54779360-54779379 None:intergenic 35.0%
! TTTGCTGTCCTTGATAGAAA+AGG - chr1_2:54779555-54779574 Msa0077750:CDS 35.0%
GATGAACAGAGTCATTTATG+GGG + chr1_2:54779582-54779601 None:intergenic 35.0%
AAATGACTCTGTTCATCATG+TGG - chr1_2:54779585-54779604 Msa0077750:CDS 35.0%
TTGGAAATGGATCTGATGAA+CGG - chr1_2:54779729-54779748 Msa0077750:CDS 35.0%
! AGCAGTTCATCATTTTCTTC+AGG - chr1_2:54780002-54780021 Msa0077750:CDS 35.0%
TAAGATGTTGGATGGCAATT+TGG - chr1_2:54780165-54780184 Msa0077750:intron 35.0%
TCGATGTCAAAAGTTTGGTT+TGG - chr1_2:54780205-54780224 Msa0077750:intron 35.0%
TTCAATAGAAAGTCAGTGTG+TGG + chr1_2:54780250-54780269 None:intergenic 35.0%
AACAAGAGAATACACACTTC+AGG + chr1_2:54780290-54780309 None:intergenic 35.0%
! AAACAAGGCATTTGTTTCAG+AGG - chr1_2:54780423-54780442 Msa0077750:intron 35.0%
!!! TATAAACGTACAGTTTTGGG+AGG + chr1_2:54780477-54780496 None:intergenic 35.0%
AAGTCATTCCACATAATCGT+TGG - chr1_2:54780764-54780783 Msa0077750:intron 35.0%
AGTCATTCCACATAATCGTT+GGG - chr1_2:54780765-54780784 Msa0077750:intron 35.0%
!! TGATAGAAGACTTGATTTGG+AGG - chr1_2:54780806-54780825 Msa0077750:intron 35.0%
GATTATGTGGTGTACAAAGT+AGG - chr1_2:54781227-54781246 Msa0077750:intron 35.0%
TTATGTGGTGTACAAAGTAG+GGG - chr1_2:54781229-54781248 Msa0077750:intron 35.0%
!! AGCTGATTTGAAGTTGACAT+GGG - chr1_2:54781384-54781403 Msa0077750:intron 35.0%
! GTCAAAGCTTTAGTTGTGTT+GGG - chr1_2:54781424-54781443 Msa0077750:intron 35.0%
! GGGGATTTAAAACATGGAAT+AGG + chr1_2:54781548-54781567 None:intergenic 35.0%
! ATGGTTGGGGATTTAAAACA+TGG + chr1_2:54781554-54781573 None:intergenic 35.0%
ACGGTATAGTTAAATGGTTG+GGG + chr1_2:54781567-54781586 None:intergenic 35.0%
GAACGGTATAGTTAAATGGT+TGG + chr1_2:54781569-54781588 None:intergenic 35.0%
GGTAGAACGGTATAGTTAAA+TGG + chr1_2:54781573-54781592 None:intergenic 35.0%
!! CCCAAAATGTTTTGTTGATC+AGG - chr1_2:54781591-54781610 Msa0077750:intron 35.0%
! CCCTGATCAACAAAACATTT+TGG + chr1_2:54781595-54781614 None:intergenic 35.0%
AATGTGCTAAGAAGATGTGT+TGG - chr1_2:54781745-54781764 Msa0077750:intron 35.0%
! TTGGATGATACCTGTTGATT+TGG - chr1_2:54782021-54782040 Msa0077750:intron 35.0%
CATGACTATACCAAATCAAC+AGG + chr1_2:54782034-54782053 None:intergenic 35.0%
!! CTGTTGATTTGGTATAGTCA+TGG - chr1_2:54782032-54782051 Msa0077750:intron 35.0%
CTCTATGCATGATAGAAAGA+TGG + chr1_2:54782074-54782093 None:intergenic 35.0%
! TTCCCGTTCTTTTTGATGAA+TGG - chr1_2:54782123-54782142 Msa0077750:intron 35.0%
AGCCATTCATCAAAAAGAAC+GGG + chr1_2:54782128-54782147 None:intergenic 35.0%
CAGCCATTCATCAAAAAGAA+CGG + chr1_2:54782129-54782148 None:intergenic 35.0%
! TAGTACCAAATTGATGACCA+TGG - chr1_2:54782246-54782265 Msa0077750:CDS 35.0%
TAACACCATGGTCATCAATT+TGG + chr1_2:54782254-54782273 None:intergenic 35.0%
AGCAGCATAATAAAGTTCAG+AGG + chr1_2:54782382-54782401 None:intergenic 35.0%
AGCAAGAGCTTAACTAGATT+GGG + chr1_2:54782443-54782462 None:intergenic 35.0%
AAGCAAGAGCTTAACTAGAT+TGG + chr1_2:54782444-54782463 None:intergenic 35.0%
TATTCCCTAACAAAACCCAA+AGG - chr1_2:54782491-54782510 Msa0077750:intron 35.0%
!!! ACTTCCTTTGGGTTTTGTTA+GGG + chr1_2:54782498-54782517 None:intergenic 35.0%
!!! AACTTCCTTTGGGTTTTGTT+AGG + chr1_2:54782499-54782518 None:intergenic 35.0%
! ACCAGCAAGACTAACATTTT+CGG + chr1_2:54782717-54782736 None:intergenic 35.0%
! CTGATCATGGAAGTATGATA+TGG + chr1_2:54782768-54782787 None:intergenic 35.0%
ATACTTCCATGATCAGTACT+TGG - chr1_2:54782772-54782791 Msa0077750:intron 35.0%
TAAGTAAGAACACGCAAAGT+CGG + chr1_2:54782871-54782890 None:intergenic 35.0%
CAATAAGAGAAGTAATCGTC+AGG + chr1_2:54782935-54782954 None:intergenic 35.0%
AGAAACGGTAAGTAACTACA+TGG - chr1_2:54783032-54783051 Msa0077750:CDS 35.0%
GAAACGGTAAGTAACTACAT+GGG - chr1_2:54783033-54783052 Msa0077750:CDS 35.0%
! GCTTTTCTAACAACAGACTT+CGG + chr1_2:54783111-54783130 None:intergenic 35.0%
AAGATACTTGTGGTACTAGA+CGG + chr1_2:54783355-54783374 None:intergenic 35.0%
CCAAAACATCAAGATACTTG+TGG + chr1_2:54783365-54783384 None:intergenic 35.0%
! CCACAAGTATCTTGATGTTT+TGG - chr1_2:54783362-54783381 Msa0077750:intron 35.0%
AAAATTGGCTGGCAATTTCA+TGG - chr1_2:54783513-54783532 Msa0077750:intron 35.0%
! CTTGTGCTGATAAAACCAAA+AGG - chr1_2:54783628-54783647 Msa0077750:intron 35.0%
! GACAGAGAAAACAAACCTTT+TGG + chr1_2:54783646-54783665 None:intergenic 35.0%
AAGTGTGTTTCCTATTCTGA+AGG - chr1_2:54783817-54783836 Msa0077750:intron 35.0%
! GCCATAACTTTTGCATTTAG+AGG + chr1_2:54784062-54784081 None:intergenic 35.0%
!! TTATGGCTTGCATATTTTGG+AGG - chr1_2:54784075-54784094 Msa0077750:intron 35.0%
AGATTGCCTGATGATTTATC+TGG + chr1_2:54784119-54784138 None:intergenic 35.0%
TAAATCATCAGGCAATCTAC+TGG - chr1_2:54784121-54784140 Msa0077750:CDS 35.0%
GAATTCCAAACAAATACGGA+AGG + chr1_2:54784156-54784175 None:intergenic 35.0%
! GGAATTCAATTTTGTCTTGG+TGG - chr1_2:54784169-54784188 Msa0077750:CDS 35.0%
ACATAGTTAGCTATGTACCT+AGG - chr1_2:54784214-54784233 Msa0077750:CDS 35.0%
AGTGCATTATGACATTACCT+AGG + chr1_2:54784234-54784253 None:intergenic 35.0%
GGTAATGTCATAATGCACTT+AGG - chr1_2:54784235-54784254 Msa0077750:CDS 35.0%
TGCTAAAAGTGAATAAGCAG+AGG - chr1_2:54784316-54784335 Msa0077750:intron 35.0%
! ATGAACCTTTTGCAATATGC+AGG - chr1_2:54784418-54784437 Msa0077750:intron 35.0%
ATCATCCTGCATATTGCAAA+AGG + chr1_2:54784426-54784445 None:intergenic 35.0%
ATATGGAGTACATCAAGCAA+CGG + chr1_2:54784597-54784616 None:intergenic 35.0%
! GTGTTGTCCCATTTAAGATA+TGG + chr1_2:54784614-54784633 None:intergenic 35.0%
! GAGATCTTTGCCATTTACAA+AGG + chr1_2:54784685-54784704 None:intergenic 35.0%
!! GGTTCTGAAGCATTATACAT+TGG - chr1_2:54784813-54784832 Msa0077750:intron 35.0%
ATATATGCAGCAAGCAGATA+AGG + chr1_2:54785028-54785047 None:intergenic 35.0%
! CTGCTTGCTGCATATATATA+TGG - chr1_2:54785031-54785050 Msa0077750:CDS 35.0%
GCTGCATATATATATGGTTG+TGG - chr1_2:54785037-54785056 Msa0077750:CDS 35.0%
! GGATGTTCTCTTGATTTTTG+AGG - chr1_2:54785109-54785128 Msa0077750:CDS 35.0%
GAAATTCTTTGCAGTCTGTA+AGG - chr1_2:54785169-54785188 Msa0077750:intron 35.0%
ACCTTCATAACTTCCTAAAC+TGG - chr1_2:54785306-54785325 Msa0077750:intron 35.0%
ACCAGTTTAGGAAGTTATGA+AGG + chr1_2:54785310-54785329 None:intergenic 35.0%
TTCCTAAACTGGTTACAACA+GGG - chr1_2:54785317-54785336 Msa0077750:intron 35.0%
TTAGAAGTTCTTCCAGAAAC+TGG + chr1_2:54785345-54785364 None:intergenic 35.0%
TACCTCCAAATATGCAAAAC+AGG - chr1_2:54785476-54785495 Msa0077750:CDS 35.0%
! TACCTGTTTTGCATATTTGG+AGG + chr1_2:54785481-54785500 None:intergenic 35.0%
CTGTGACTATTTCATCTGAA+TGG - chr1_2:54785511-54785530 Msa0077750:CDS 35.0%
CTCTACACATTTGAAAGATC+TGG + chr1_2:54785605-54785624 None:intergenic 35.0%
CAGATCTTTCAAATGTGTAG+AGG - chr1_2:54785603-54785622 Msa0077750:intron 35.0%
GATCTTTCAAATGTGTAGAG+GGG - chr1_2:54785605-54785624 Msa0077750:intron 35.0%
TTGACATAGATTGTGTGTAC+TGG - chr1_2:54785675-54785694 Msa0077750:intron 35.0%
! GAAAGTACAGATTAGGGTTT+AGG - chr1_2:54785736-54785755 Msa0077750:CDS 35.0%
!! TGTTGAAGGGTAATTTTGAC+CGG - chr1_2:54786120-54786139 Msa0077750:intron 35.0%
!!! GAGTTCATTTTGGGTTATAC+TGG - chr1_2:54786288-54786307 Msa0077750:intron 35.0%
ACAGAAGAGAATCAATGTGA+AGG + chr1_2:54786344-54786363 None:intergenic 35.0%
! TAGGATACTGTGTCTTTTGT+TGG - chr1_2:54786645-54786664 Msa0077750:intron 35.0%
AGACATTACACAGTTCTACA+TGG + chr1_2:54786749-54786768 None:intergenic 35.0%
!!! TTTTTCAAGACAGTGATGCA+GGG + chr1_2:54786948-54786967 None:intergenic 35.0%
AGTAGACATGTACAATCTCT+TGG - chr1_2:54787062-54787081 Msa0077750:intron 35.0%
TAGGTTACAGTAGAGACTAT+TGG + chr1_2:54787139-54787158 None:intergenic 35.0%
GTACATCACCATTAGCATTA+CGG + chr1_2:54787357-54787376 None:intergenic 35.0%
TGTACAAATTGCAACTAGAG+AGG - chr1_2:54787372-54787391 Msa0077750:intron 35.0%
!!! CAATTGGCTTATTTTAGGGT+AGG + chr1_2:54787665-54787684 None:intergenic 35.0%
!! GTCTGCAATTGGCTTATTTT+AGG + chr1_2:54787670-54787689 None:intergenic 35.0%
TTGAAGAACTTGTCTGCAAT+TGG + chr1_2:54787681-54787700 None:intergenic 35.0%
ATGTCCTAAGAACTAGATGA+TGG - chr1_2:54787975-54787994 Msa0077750:intron 35.0%
TGAAAATATGCCGGGAAAAT+TGG - chr1_2:54788147-54788166 Msa0077750:intron 35.0%
GAAAATATGCCGGGAAAATT+GGG - chr1_2:54788148-54788167 Msa0077750:intron 35.0%
! TATTGTCAACCCAATTTTCC+CGG + chr1_2:54788160-54788179 None:intergenic 35.0%
ATATTTAGCCATGCTATCCT+TGG - chr1_2:54788227-54788246 Msa0077750:intron 35.0%
AACATAATCCAAGGATAGCA+TGG + chr1_2:54788238-54788257 None:intergenic 35.0%
!! TCATTCTTTGAAATGGAAGC+AGG + chr1_2:54788469-54788488 None:intergenic 35.0%
GACATAACAAACAGGTGATT+TGG - chr1_2:54788759-54788778 Msa0077750:intron 35.0%
! AATGATGTGTCCAACTTTTC+TGG + chr1_2:54788804-54788823 None:intergenic 35.0%
!! GCGAAGTATTTTCAGAAGAA+TGG - chr1_2:54788893-54788912 Msa0077750:intron 35.0%
! ACAGACTCTATTGATTATCC+TGG - chr1_2:54788993-54789012 Msa0077750:intron 35.0%
AATCATGTCTCATGATAGCA+TGG - chr1_2:54789023-54789042 Msa0077750:intron 35.0%
AGCAGGAAAAAAGAGTTAAG+AGG + chr1_2:54789117-54789136 None:intergenic 35.0%
CAGAGAAAATATATGGTTGC+GGG + chr1_2:54789239-54789258 None:intergenic 35.0%
GCAGAGAAAATATATGGTTG+CGG + chr1_2:54789240-54789259 None:intergenic 35.0%
!! GTCTTACCAGAAAAAGTGTT+TGG - chr1_2:54789277-54789296 Msa0077750:intron 35.0%
TCAAGGATTGAAGAAAAGCA+GGG + chr1_2:54789388-54789407 None:intergenic 35.0%
ATCAAGGATTGAAGAAAAGC+AGG + chr1_2:54789389-54789408 None:intergenic 35.0%
! CAATCCTTGATTTTCATGCT+TGG - chr1_2:54789398-54789417 Msa0077750:CDS 35.0%
CACATACATAAACACACAAG+TGG + chr1_2:54789508-54789527 None:intergenic 35.0%
TGATGTGGAGAAATTACTGA+AGG - chr1_2:54789605-54789624 Msa0077750:CDS 35.0%
!!! AAGGTTGGTTTTTCAATGAG+TGG - chr1_2:54789624-54789643 Msa0077750:CDS 35.0%
! CGACTATTTTGCAGAACTTT+GGG - chr1_2:54789833-54789852 Msa0077750:intron 35.0%
TGTTCACTTCCTTAGTTTCA+AGG - chr1_2:54789894-54789913 Msa0077750:intron 35.0%
! GTTTCCTTTTATGAACAGAG+AGG - chr1_2:54790043-54790062 Msa0077750:CDS 35.0%
!! AATGTTTCTGGAGTTGTTTC+TGG - chr1_2:54790087-54790106 Msa0077750:intron 35.0%
TTCAAACTAGAATCAGGAGA+AGG - chr1_2:54790154-54790173 Msa0077750:intron 35.0%
TTGTTGCATTATTTGTGGTC+TGG + chr1_2:54790203-54790222 None:intergenic 35.0%
TATATTGGGCAAAGTCTTGA+TGG - chr1_2:54790258-54790277 Msa0077750:intron 35.0%
! GTTTTGCTTACAATAGTGAC+CGG + chr1_2:54790437-54790456 None:intergenic 35.0%
CATTGAATAAGTGATGTACG+TGG + chr1_2:54790511-54790530 None:intergenic 35.0%
! TTTAGCAAGGTACTCATCTT+TGG - chr1_2:54790579-54790598 Msa0077750:CDS 35.0%
TGGCATTATGTACTCATCTT+TGG - chr1_2:54790693-54790712 Msa0077750:CDS 35.0%
CTAATATTGCAGAGTCAACT+CGG - chr1_2:54790887-54790906 Msa0077750:intron 35.0%
ATGCTCTTGAAGTATATCGA+AGG + chr1_2:54791052-54791071 None:intergenic 35.0%
ATATCCTAAATCCAATGTCC+TGG + chr1_2:54791225-54791244 None:intergenic 35.0%
TATAGTAGATCCAATGGCAT+AGG + chr1_2:54791322-54791341 None:intergenic 35.0%
TGTTTGATGAATCGTCATCA+AGG + chr1_2:54791625-54791644 None:intergenic 35.0%
ATCAAACAACTCCTTGAAAG+TGG - chr1_2:54791637-54791656 Msa0077750:intron 35.0%
ATCCTTAGAGGACTTTATCA+CGG + chr1_2:54791861-54791880 None:intergenic 35.0%
! GATAAAGTCCTCTAAGGATT+TGG - chr1_2:54791862-54791881 Msa0077750:intron 35.0%
! TTTTCGTTCCAAATCCTTAG+AGG + chr1_2:54791873-54791892 None:intergenic 35.0%
ACAAGAACAGAAACAAGATG+GGG + chr1_2:54791926-54791945 None:intergenic 35.0%
!! TTCTGTTCTTGTTACTTTGG+AGG - chr1_2:54791934-54791953 Msa0077750:intron 35.0%
TCTATTCCTGAGACAAATTC+TGG + chr1_2:54792031-54792050 None:intergenic 35.0%
TTGCGGAAAAAATTCCAGTA+AGG - chr1_2:54792092-54792111 Msa0077750:intron 35.0%
! ATACTTTTAGCAAGCCTTAC+TGG + chr1_2:54792109-54792128 None:intergenic 35.0%
AAGTATGTATTGTTGGATGG+AGG - chr1_2:54792123-54792142 Msa0077750:intron 35.0%
! GGGTATATTTCTAACAATGG+CGG + chr1_2:54792215-54792234 None:intergenic 35.0%
GGCAACATTTATTGGTACAA+TGG - chr1_2:54792286-54792305 Msa0077750:intron 35.0%
AATGGACAGATCATCTATTG+TGG - chr1_2:54792304-54792323 Msa0077750:intron 35.0%
TACCATGCCATAGAAAGATA+TGG + chr1_2:54792546-54792565 None:intergenic 35.0%
TGAAATAAGCGTGCTTTATG+AGG - chr1_2:54792636-54792655 Msa0077750:intron 35.0%
AGTAACTGTGTTCATCATCT+TGG - chr1_2:54792943-54792962 Msa0077750:CDS 35.0%
TTCGAGTCAGAAGAAAAAGA+AGG - chr1_2:54792993-54793012 Msa0077750:intron 35.0%
AACAGATATCTTGTCTGTCA+AGG - chr1_2:54793047-54793066 Msa0077750:intron 35.0%
ACAGATATCTTGTCTGTCAA+GGG - chr1_2:54793048-54793067 Msa0077750:intron 35.0%
ATAGAGGAAACACTTGTGTA+AGG + chr1_2:54793103-54793122 None:intergenic 35.0%
TCTTGACTCATCAAATTTCC+AGG - chr1_2:54793143-54793162 Msa0077750:CDS 35.0%
AGTGGAAAAATATACTAGCC+TGG + chr1_2:54793164-54793183 None:intergenic 35.0%
AAGACACGAGCTAGAATATT+GGG - chr1_2:54793763-54793782 Msa0077750:intron 35.0%
TTCAGTTAAATCTCTTGCAC+AGG - chr1_2:54793891-54793910 Msa0077750:CDS 35.0%
TTATGGCCATTTAAAGGGAA+AGG - chr1_2:54794037-54794056 Msa0077750:five_prime_UTR 35.0%
! GGATTCACGCTTTTAATGAT+CGG + chr1_2:54794144-54794163 None:intergenic 35.0%
! CGTGTTCTTCTTCTTCGTTT+TGG + chr1_2:54775500-54775519 None:intergenic 40.0%
AAACGAAGAAGAAGAACACG+AGG - chr1_2:54775500-54775519 Msa0077750:three_prime_UTR 40.0%
! AAGTTAGGGTTAGGGTTTTG+TGG + chr1_2:54775526-54775545 None:intergenic 40.0%
TCTAGCAATGGCAAATTCCT+TGG - chr1_2:54775571-54775590 Msa0077750:three_prime_UTR 40.0%
AGCTTGTAATTGAGAAGCCA+AGG + chr1_2:54775591-54775610 None:intergenic 40.0%
AAGATAGAAGGACGAGTGAA+CGG + chr1_2:54775656-54775675 None:intergenic 40.0%
GGATTCAGTACTCTTATCAG+CGG + chr1_2:54775696-54775715 None:intergenic 40.0%
!! TTCTCATTAGCACCGATGAA+AGG - chr1_2:54775929-54775948 Msa0077750:intron 40.0%
!! TTAGCACCGATGAAAGGTTT+AGG - chr1_2:54775935-54775954 Msa0077750:intron 40.0%
GATACATGAGCACAATGTTG+AGG - chr1_2:54776226-54776245 Msa0077750:intron 40.0%
AATGCATGTGTTTCGTGGTA+CGG + chr1_2:54776272-54776291 None:intergenic 40.0%
GAACAAATGCATGTGTTTCG+TGG + chr1_2:54776277-54776296 None:intergenic 40.0%
! CTTAAAGGTGTGAAAGACTC+GGG - chr1_2:54776427-54776446 Msa0077750:intron 40.0%
TGCTGCACTATAACCATTCT+AGG + chr1_2:54776463-54776482 None:intergenic 40.0%
!!! TTGTTGAAGTTTTGGGTGTG+AGG - chr1_2:54776657-54776676 Msa0077750:CDS 40.0%
!!! TGTTGAAGTTTTGGGTGTGA+GGG - chr1_2:54776658-54776677 Msa0077750:CDS 40.0%
GAAGGATCTTTCAGATCACA+AGG - chr1_2:54776742-54776761 Msa0077750:intron 40.0%
AAATGGATCTTGACATGAGG+GGG + chr1_2:54776881-54776900 None:intergenic 40.0%
CATATCCAGCTATGTGGATT+TGG + chr1_2:54777108-54777127 None:intergenic 40.0%
GCATTATATATGCAAGGTCC+GGG - chr1_2:54777306-54777325 Msa0077750:CDS 40.0%
CATTATATATGCAAGGTCCG+GGG - chr1_2:54777307-54777326 Msa0077750:CDS 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG + chr1_2:54777339-54777358 None:intergenic 40.0%
!!! CTTTTTTTTTTGTGGTGGCC+GGG + chr1_2:54777340-54777359 None:intergenic 40.0%
!! GTTGGTTTGTGGTCTTTGTT+TGG + chr1_2:54777428-54777447 None:intergenic 40.0%
TTGCAAACTTCCCATTAGGA+AGG - chr1_2:54777595-54777614 Msa0077750:CDS 40.0%
! AATCAACTGGCTCAAAAGGT+TGG + chr1_2:54777731-54777750 None:intergenic 40.0%
! CCTTTTGAGCCAGTTGATTA+CGG - chr1_2:54777732-54777751 Msa0077750:CDS 40.0%
! CTTTTGAGCCAGTTGATTAC+GGG - chr1_2:54777733-54777752 Msa0077750:CDS 40.0%
! TTTTGAGCCAGTTGATTACG+GGG - chr1_2:54777734-54777753 Msa0077750:CDS 40.0%
CATTGATCGAAATGGATGAC+AGG + chr1_2:54778194-54778213 None:intergenic 40.0%
! AGTACCCTATGTTGGTGAAA+TGG + chr1_2:54778318-54778337 None:intergenic 40.0%
GACAATAGTTCAACAGAAGG+TGG + chr1_2:54778861-54778880 None:intergenic 40.0%
AGGAGGCTAAAGATCTTCAT+TGG - chr1_2:54778994-54779013 Msa0077750:intron 40.0%
TGCCTTAATCAATCTTGTCC+AGG - chr1_2:54779034-54779053 Msa0077750:intron 40.0%
!!! TGTGTCAACATTTTGGGACT+AGG + chr1_2:54779186-54779205 None:intergenic 40.0%
ATGGCAACAGCGAAATTACA+AGG + chr1_2:54779282-54779301 None:intergenic 40.0%
TTCTTATAGGGATTTGCCTG+GGG - chr1_2:54779341-54779360 Msa0077750:intron 40.0%
! TATGGGGACCTTTTCTATCA+AGG + chr1_2:54779566-54779585 None:intergenic 40.0%
!! CACACAAGTTGATAGGATCT+TGG + chr1_2:54779614-54779633 None:intergenic 40.0%
TTAATGCAATAGTTGCAGCC+TGG - chr1_2:54779852-54779871 Msa0077750:CDS 40.0%
CAGCCTGGTCAAATATCATT+TGG - chr1_2:54779867-54779886 Msa0077750:CDS 40.0%
GCACCAAATGATATTTGACC+AGG + chr1_2:54779873-54779892 None:intergenic 40.0%
TCAAATGTCAATTAGCTGGC+TGG - chr1_2:54779926-54779945 Msa0077750:intron 40.0%
CAAATGTCAATTAGCTGGCT+GGG - chr1_2:54779927-54779946 Msa0077750:intron 40.0%
GAAAATGATGAACTGCTGCA+CGG + chr1_2:54779999-54780018 None:intergenic 40.0%
!! GTTTGGCTTGTATCATCCAA+AGG - chr1_2:54780222-54780241 Msa0077750:intron 40.0%
TTCGGGCATCTTGAAAAACA+AGG - chr1_2:54780408-54780427 Msa0077750:CDS 40.0%
ATTCCACATAATCGTTGGGT+TGG - chr1_2:54780769-54780788 Msa0077750:intron 40.0%
TTCCACATAATCGTTGGGTT+GGG - chr1_2:54780770-54780789 Msa0077750:intron 40.0%
! GATTTGGAGGTGTACAAAGT+CGG - chr1_2:54780819-54780838 Msa0077750:intron 40.0%
! ATTTGGAGGTGTACAAAGTC+GGG - chr1_2:54780820-54780839 Msa0077750:intron 40.0%
AAGCCATTCCACATAATCGT+TGG - chr1_2:54781172-54781191 Msa0077750:intron 40.0%
AGCCATTCCACATAATCGTT+GGG - chr1_2:54781173-54781192 Msa0077750:intron 40.0%
AACCCAACGATTATGTGGAA+TGG + chr1_2:54780770-54780789 None:intergenic 40.0%
ATTCCACATAATCGTTGGGT+TGG - chr1_2:54780769-54780788 Msa0077750:intron 40.0%
TTCCACATAATCGTTGGGTT+GGG - chr1_2:54780770-54780789 Msa0077750:intron 40.0%
!! GAGCTGATTTGAAGTTGACA+TGG - chr1_2:54781383-54781402 Msa0077750:intron 40.0%
!! GCTGATTTGAAGTTGACATG+GGG - chr1_2:54781385-54781404 Msa0077750:intron 40.0%
! GGTCAAAGCTTTAGTTGTGT+TGG - chr1_2:54781423-54781442 Msa0077750:intron 40.0%
! AAAGCTTTAGTTGTGTTGGG+TGG - chr1_2:54781427-54781446 Msa0077750:intron 40.0%
!! CAAGCAGCTTTAAATGTCGA+TGG - chr1_2:54781676-54781695 Msa0077750:intron 40.0%
!! AGCTTTAAATGTCGATGGCT+TGG - chr1_2:54781681-54781700 Msa0077750:intron 40.0%
TCGAGAAGCTTAGAAGAATC+TGG + chr1_2:54781715-54781734 None:intergenic 40.0%
AGATTCTTCTAAGCTTCTCG+AGG - chr1_2:54781714-54781733 Msa0077750:intron 40.0%
TCCAAAGTGAATATGGTGAC+CGG - chr1_2:54781877-54781896 Msa0077750:intron 40.0%
! ATTGACTTCTGATCAGCTGT+TGG - chr1_2:54781965-54781984 Msa0077750:intron 40.0%
TTGACTTCTGATCAGCTGTT+GGG - chr1_2:54781966-54781985 Msa0077750:intron 40.0%
TTCTCGGAATGTACTCTTGT+TGG - chr1_2:54782002-54782021 Msa0077750:intron 40.0%
! CGTTCTTTTTGATGAATGGC+TGG - chr1_2:54782127-54782146 Msa0077750:intron 40.0%
AGGTAGTGCCTTCATTAGAA+TGG - chr1_2:54782314-54782333 Msa0077750:intron 40.0%
!! ACCGAAAATGTTAGTCTTGC+TGG - chr1_2:54782713-54782732 Msa0077750:intron 40.0%
!! TGCTTTCCAAGTACTGATCA+TGG + chr1_2:54782781-54782800 None:intergenic 40.0%
AAGTAAGAACACGCAAAGTC+GGG + chr1_2:54782870-54782889 None:intergenic 40.0%
ACTTCTCTTATTGCAGACAC+AGG - chr1_2:54782942-54782961 Msa0077750:CDS 40.0%
AGATACTTGTGGTACTAGAC+GGG + chr1_2:54783354-54783373 None:intergenic 40.0%
!! GAATGCTGGTGATGTTCTTT+TGG - chr1_2:54783859-54783878 Msa0077750:intron 40.0%
! ATGTTCTTTTGGACGAGGTA+CGG - chr1_2:54783870-54783889 Msa0077750:intron 40.0%
! CAGCTTTTGTATGCCAAACT+CGG - chr1_2:54784035-54784054 Msa0077750:intron 40.0%
CTAGTGCCAGATAAATCATC+AGG - chr1_2:54784110-54784129 Msa0077750:CDS 40.0%
AAAGGTTCATTCGTGCAACT+AGG + chr1_2:54784408-54784427 None:intergenic 40.0%
GCAGGATGATAGCAAGATAA+AGG - chr1_2:54784436-54784455 Msa0077750:intron 40.0%
!! CTAAGAAATGGAGGTGTTCA+TGG + chr1_2:54784505-54784524 None:intergenic 40.0%
! TGAACTGTGCTGCTAAGAAA+TGG + chr1_2:54784517-54784536 None:intergenic 40.0%
TATGGAGTACATCAAGCAAC+GGG + chr1_2:54784596-54784615 None:intergenic 40.0%
TACAAAGAGATCCATAGCAC+TGG + chr1_2:54784902-54784921 None:intergenic 40.0%
CTTTGTACTCTGCAGCAAAA+TGG - chr1_2:54784915-54784934 Msa0077750:intron 40.0%
TCCTTCTCTTCTTGTTCCAT+TGG - chr1_2:54784965-54784984 Msa0077750:intron 40.0%
TTGTTAAGTTACACGCCTTG+CGG - chr1_2:54785211-54785230 Msa0077750:intron 40.0%
CTTCCTAAACTGGTTACAAC+AGG - chr1_2:54785316-54785335 Msa0077750:intron 40.0%
AACCCTGTTGTAACCAGTTT+AGG + chr1_2:54785322-54785341 None:intergenic 40.0%
GGAAGAACTTCTAATTGCGT+TGG - chr1_2:54785351-54785370 Msa0077750:intron 40.0%
ATATTATGATAGGACGAGCC+CGG + chr1_2:54785451-54785470 None:intergenic 40.0%
TGCTTAGCTGCTTCTGTTAT+TGG - chr1_2:54785573-54785592 Msa0077750:CDS 40.0%
CAAATGTGTAGAGGGGAATT+TGG - chr1_2:54785612-54785631 Msa0077750:intron 40.0%
TAGGGTTTAGGGATATTCTG+TGG - chr1_2:54785748-54785767 Msa0077750:CDS 40.0%
!!! GGGGATACATTTTTTTGGTG+TGG + chr1_2:54786154-54786173 None:intergenic 40.0%
ACTGGGAAATTCTCCAACTA+CGG - chr1_2:54786306-54786325 Msa0077750:intron 40.0%
AATGATTCTCTCCTTGCTCA+AGG - chr1_2:54786522-54786541 Msa0077750:intron 40.0%
ATGATTCTCTCCTTGCTCAA+GGG - chr1_2:54786523-54786542 Msa0077750:intron 40.0%
! GATACTGTGTCTTTTGTTGG+AGG - chr1_2:54786648-54786667 Msa0077750:intron 40.0%
CTGATGAAACTTCCAATCTG+AGG - chr1_2:54786700-54786719 Msa0077750:intron 40.0%
! GAAACTTCCAATCTGAGGTT+TGG - chr1_2:54786705-54786724 Msa0077750:intron 40.0%
CACAGTTCTACATGGAGAAA+AGG + chr1_2:54786741-54786760 None:intergenic 40.0%
TGTGTAATGTCTTCTCCTTC+AGG - chr1_2:54786757-54786776 Msa0077750:intron 40.0%
!! CTCTTTACAGAAAGTGTTGC+AGG - chr1_2:54786798-54786817 Msa0077750:CDS 40.0%
TATGTCATTCCCTTGCTTGT+TGG - chr1_2:54786847-54786866 Msa0077750:CDS 40.0%
!!! CTTTTTCAAGACAGTGATGC+AGG + chr1_2:54786949-54786968 None:intergenic 40.0%
TAGGTCACAGTAGAGACTAT+TGG + chr1_2:54787275-54787294 None:intergenic 40.0%
TTTCTGTGCCGTAATGCTAA+TGG - chr1_2:54787346-54787365 Msa0077750:intron 40.0%
ACTCACATTTATGCGCATCA+AGG + chr1_2:54787398-54787417 None:intergenic 40.0%
TTCTTCAACCAATGCCCTTA+GGG - chr1_2:54787693-54787712 Msa0077750:intron 40.0%
CTTAGGACATCTCTCTTTCA+AGG + chr1_2:54787965-54787984 None:intergenic 40.0%
! TCCTAAGAACTAGATGATGG+AGG - chr1_2:54787978-54787997 Msa0077750:intron 40.0%
!! AACTAGATGATGGAGGCATA+TGG - chr1_2:54787985-54788004 Msa0077750:intron 40.0%
GCAGTGTAAGACTTAAGAGA+CGG - chr1_2:54788007-54788026 Msa0077750:intron 40.0%
!! TTGGACAATGCCTGTTTTTC+TGG - chr1_2:54788268-54788287 Msa0077750:intron 40.0%
CAAGTATGAGGTCAAGTATG+CGG + chr1_2:54788593-54788612 None:intergenic 40.0%
CACCAAAGTGTGGCAAAATT+AGG - chr1_2:54788613-54788632 Msa0077750:intron 40.0%
! GACCTAATTTTGCCACACTT+TGG + chr1_2:54788618-54788637 None:intergenic 40.0%
TAGTACCATGCCAGAAAAGT+TGG - chr1_2:54788791-54788810 Msa0077750:intron 40.0%
! ATTTGCTGCTTGATTCTTGC+AGG - chr1_2:54788836-54788855 Msa0077750:intron 40.0%
ACAGTTTCGGAAAGACTTGA+CGG + chr1_2:54788961-54788980 None:intergenic 40.0%
! GACTCTATTGATTATCCTGG+AGG - chr1_2:54788996-54789015 Msa0077750:intron 40.0%
GAGACATGATTATATCCTCC+AGG + chr1_2:54789014-54789033 None:intergenic 40.0%
!!! GTCATTTTTTCCTGTCACGA+TGG + chr1_2:54789157-54789176 None:intergenic 40.0%
!!! AGATGCCCAAACACTTTTTC+TGG + chr1_2:54789286-54789305 None:intergenic 40.0%
! ACAGCTGATTCTCCAATAAC+TGG + chr1_2:54789322-54789341 None:intergenic 40.0%
AAGCAGGGAAACCAAAAGAT+GGG + chr1_2:54789373-54789392 None:intergenic 40.0%
AAAGCAGGGAAACCAAAAGA+TGG + chr1_2:54789374-54789393 None:intergenic 40.0%
TATCTGCGATTGTTCCTTGT+TGG - chr1_2:54789568-54789587 Msa0077750:intron 40.0%
GTGGAGAAATTACTGAAGGT+TGG - chr1_2:54789609-54789628 Msa0077750:CDS 40.0%
CTTCTGTGCTCAACAATTTC+AGG + chr1_2:54789718-54789737 None:intergenic 40.0%
CTGAAATTGTTGAGCACAGA+AGG - chr1_2:54789716-54789735 Msa0077750:intron 40.0%
! GCGACTATTTTGCAGAACTT+TGG - chr1_2:54789832-54789851 Msa0077750:intron 40.0%
! ATTTTGCAGAACTTTGGGTG+AGG - chr1_2:54789838-54789857 Msa0077750:intron 40.0%
! TTTTGCAGAACTTTGGGTGA+GGG - chr1_2:54789839-54789858 Msa0077750:intron 40.0%
CTCAATATTGAGGAAACAGG+TGG + chr1_2:54789924-54789943 None:intergenic 40.0%
CGTCTCAATATTGAGGAAAC+AGG + chr1_2:54789927-54789946 None:intergenic 40.0%
TGTTGACCAGTCAATGTTTC+TGG - chr1_2:54790075-54790094 Msa0077750:intron 40.0%
ACAACTCCAGAAACATTGAC+TGG + chr1_2:54790084-54790103 None:intergenic 40.0%
GAATGACCACTGCAAAGTAA+CGG - chr1_2:54790318-54790337 Msa0077750:intron 40.0%
CAAAGTAACGGTAGTAGATG+TGG - chr1_2:54790330-54790349 Msa0077750:intron 40.0%
TGGCTTATAATAGTGACCAG+AGG - chr1_2:54790549-54790568 Msa0077750:CDS 40.0%
TTGCATCTACAAGATGCAAG+AGG + chr1_2:54790937-54790956 None:intergenic 40.0%
CATTGTGAGGAAAGAGTTGA+AGG - chr1_2:54790982-54791001 Msa0077750:intron 40.0%
ACTAGGACGAGAATAAAGAC+AGG + chr1_2:54791194-54791213 None:intergenic 40.0%
! ATGTCCTGGTGTCTAAAACT+AGG + chr1_2:54791211-54791230 None:intergenic 40.0%
!!! AGTTTTAGACACCAGGACAT+TGG - chr1_2:54791211-54791230 Msa0077750:intron 40.0%
TTAACGCCTAAAGGCAACAA+AGG - chr1_2:54791509-54791528 Msa0077750:intron 40.0%
CTTGAACCTTTGTTGCCTTT+AGG + chr1_2:54791518-54791537 None:intergenic 40.0%
GATCAAGATCAAGTTCTCGT+TGG - chr1_2:54791537-54791556 Msa0077750:intron 40.0%
!! AAGTTCTCGTTGGCTTCAAT+TGG - chr1_2:54791547-54791566 Msa0077750:intron 40.0%
AAGAACTTTGATCAACGCAG+CGG + chr1_2:54791801-54791820 None:intergenic 40.0%
! TCAAGTTTCGACAGTGCTTT+TGG + chr1_2:54791827-54791846 None:intergenic 40.0%
TGGATTACGAAAGCTTCTTG+CGG - chr1_2:54792075-54792094 Msa0077750:intron 40.0%
! TATTTCTAACAATGGCGGCA+GGG + chr1_2:54792210-54792229 None:intergenic 40.0%
! ATATTTCTAACAATGGCGGC+AGG + chr1_2:54792211-54792230 None:intergenic 40.0%
AATATACCCAACTGCTGTTG+AGG - chr1_2:54792226-54792245 Msa0077750:intron 40.0%
TCATCTATTGTGGCATTCCA+TGG - chr1_2:54792314-54792333 Msa0077750:intron 40.0%
CATGCTCTCTGTAAGCTTTA+GGG + chr1_2:54792450-54792469 None:intergenic 40.0%
ACATGCTCTCTGTAAGCTTT+AGG + chr1_2:54792451-54792470 None:intergenic 40.0%
GTCGATGAAACTGTATCTTC+AGG - chr1_2:54792506-54792525 Msa0077750:intron 40.0%
AACTGTATCTTCAGGAAGCA+TGG - chr1_2:54792514-54792533 Msa0077750:intron 40.0%
! TATCTTCAGGAAGCATGGAT+AGG - chr1_2:54792519-54792538 Msa0077750:intron 40.0%
! ATCTTCAGGAAGCATGGATA+GGG - chr1_2:54792520-54792539 Msa0077750:intron 40.0%
GATAGGGCCATATCTTTCTA+TGG - chr1_2:54792536-54792555 Msa0077750:intron 40.0%
!! ATAAGCTTGCTGAGAACCAT+CGG - chr1_2:54792567-54792586 Msa0077750:intron 40.0%
ATTAGGCAATGACTTACCGA+TGG + chr1_2:54792586-54792605 None:intergenic 40.0%
!! AAGGCTAAGATTTTGGGTGA+CGG - chr1_2:54793012-54793031 Msa0077750:intron 40.0%
AAGTGTTTCCTCTATGACAC+CGG - chr1_2:54793108-54793127 Msa0077750:CDS 40.0%
ACAAGCAAAATCACTGCTGA+GGG + chr1_2:54793388-54793407 None:intergenic 40.0%
TCACGCTAGGTATATTCATG+TGG + chr1_2:54793509-54793528 None:intergenic 40.0%
CATGAATATACCTAGCGTGA+CGG - chr1_2:54793509-54793528 Msa0077750:CDS 40.0%
!! GACCTACTTGTTGTTTGCAT+CGG - chr1_2:54793540-54793559 Msa0077750:CDS 40.0%
! TGTTGTTTGCATCGGTCAAA+TGG - chr1_2:54793548-54793567 Msa0077750:CDS 40.0%
AATTATACTTCGCGGTTCAG+AGG + chr1_2:54793606-54793625 None:intergenic 40.0%
!! TATTCTAGCTCGTGTCTTCT+CGG + chr1_2:54793761-54793780 None:intergenic 40.0%
GAAGACACGAGCTAGAATAT+TGG - chr1_2:54793762-54793781 Msa0077750:intron 40.0%
AGGAAATAGAGTCCTTGAGT+GGG - chr1_2:54793923-54793942 Msa0077750:CDS 40.0%
AACATCATAGGTAGTCTCGA+AGG + chr1_2:54793954-54793973 None:intergenic 40.0%
ATGCCACCTTTCCCTTTAAA+TGG + chr1_2:54794046-54794065 None:intergenic 40.0%
! CTTTTAATGATCGGCACTTG+TGG + chr1_2:54794135-54794154 None:intergenic 40.0%
AAGAGGAAAGAGAAGCTGCA+AGG + chr1_2:54775460-54775479 None:intergenic 45.0%
TGCGGAATCAGTAAGTGCTA+TGG + chr1_2:54775621-54775640 None:intergenic 45.0%
CTCTTATCAGCGGCTTCTTT+AGG + chr1_2:54775686-54775705 None:intergenic 45.0%
TTGAGCAGCGATGGTGTAAA+TGG + chr1_2:54775717-54775736 None:intergenic 45.0%
ATTTACACCATCGCTGCTCA+AGG - chr1_2:54775716-54775735 Msa0077750:CDS 45.0%
TGGTTGTGTTTCAGGATTGG+AGG - chr1_2:54775906-54775925 Msa0077750:intron 45.0%
CAGTCCCCAGAGTAAAGAAT+TGG - chr1_2:54775978-54775997 Msa0077750:intron 45.0%
CAGCAATGTCTTCGTGATTG+TGG - chr1_2:54776478-54776497 Msa0077750:intron 45.0%
TGAAGCCCAGAATTCACGAA+AGG + chr1_2:54776713-54776732 None:intergenic 45.0%
TCTTGACATGAGGGGGTAAA+AGG + chr1_2:54776874-54776893 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG - chr1_2:54777278-54777297 Msa0077750:CDS 45.0%
CTGCTTGCAAACTTCCCATT+AGG - chr1_2:54777591-54777610 Msa0077750:CDS 45.0%
ATAGGGAGGGAGTTGTGAAA+AGG - chr1_2:54777688-54777707 Msa0077750:CDS 45.0%
TAGGGAGGGAGTTGTGAAAA+GGG - chr1_2:54777689-54777708 Msa0077750:CDS 45.0%
! CCGTAATCAACTGGCTCAAA+AGG + chr1_2:54777735-54777754 None:intergenic 45.0%
GATGAAGGCAAGCAACATTG+AGG - chr1_2:54778597-54778616 Msa0077750:CDS 45.0%
GCACACGAAGGAGTAGAAAA+AGG - chr1_2:54778649-54778668 Msa0077750:CDS 45.0%
GGTTTGATACGTTCAGTTGC+CGG - chr1_2:54778954-54778973 Msa0077750:intron 45.0%
GTTTGATACGTTCAGTTGCC+GGG - chr1_2:54778955-54778974 Msa0077750:intron 45.0%
TTCTGTAACAGCGTAGTACC+TGG + chr1_2:54779055-54779074 None:intergenic 45.0%
TGTTGACACACTTCCAACGA+AGG - chr1_2:54779196-54779215 Msa0077750:intron 45.0%
AAAACATCCAAGGCCTTCGT+TGG + chr1_2:54779212-54779231 None:intergenic 45.0%
TGGACTCCCTAATTATCTGC+AGG - chr1_2:54779418-54779437 Msa0077750:CDS 45.0%
GACTCAACATCTTCGATGTC+AGG - chr1_2:54779655-54779674 Msa0077750:CDS 45.0%
AAGAACTGAGCTGTGTACAG+CGG + chr1_2:54779809-54779828 None:intergenic 45.0%
AAGTCAGTGTGTGGTACCTT+TGG + chr1_2:54780241-54780260 None:intergenic 45.0%
!!! CGTACAGTTTTGGGAGGAAA+GGG + chr1_2:54780471-54780490 None:intergenic 45.0%
!!! ACGTACAGTTTTGGGAGGAA+AGG + chr1_2:54780472-54780491 None:intergenic 45.0%
ATCCCCGACTGTTATCCTAT+GGG - chr1_2:54780535-54780554 Msa0077750:intron 45.0%
TCAGCCCATAGGATAACAGT+CGG + chr1_2:54780542-54780561 None:intergenic 45.0%
! TCCACATAATCGTTGGGTTG+GGG - chr1_2:54780771-54780790 Msa0077750:intron 45.0%
! TTTGGAGGTGTACAAAGTCG+GGG - chr1_2:54780821-54780840 Msa0077750:intron 45.0%
! TCCACATAATCGTTGGGTTG+GGG - chr1_2:54780771-54780790 Msa0077750:intron 45.0%
GTACAAAGTAGGGGTGGTTA+TGG - chr1_2:54781238-54781257 Msa0077750:intron 45.0%
!! GGGTCTTATTGACATCCTAG+AGG - chr1_2:54781612-54781631 Msa0077750:intron 45.0%
ACTGTCTCAATATGGCCTCT+AGG + chr1_2:54781630-54781649 None:intergenic 45.0%
ACCGGTCACCATATTCACTT+TGG + chr1_2:54781881-54781900 None:intergenic 45.0%
AGCTTAACTAGATTGGGCCT+TGG + chr1_2:54782437-54782456 None:intergenic 45.0%
GGCAGGCCCAGTATATATTT+AGG + chr1_2:54782645-54782664 None:intergenic 45.0%
TGTGGCATAGCAAGGAGTAA+TGG + chr1_2:54782821-54782840 None:intergenic 45.0%
! ATTACTCCTTGCTATGCCAC+AGG - chr1_2:54782820-54782839 Msa0077750:CDS 45.0%
TTTCAACCTGTGGCATAGCA+AGG + chr1_2:54782829-54782848 None:intergenic 45.0%
GATACTTGTGGTACTAGACG+GGG + chr1_2:54783353-54783372 None:intergenic 45.0%
! TTCCTATTCTGAAGGCTGAG+TGG - chr1_2:54783825-54783844 Msa0077750:intron 45.0%
! TCCTATTCTGAAGGCTGAGT+GGG - chr1_2:54783826-54783845 Msa0077750:intron 45.0%
TGGGAATCTTCAGTGAATGC+TGG - chr1_2:54783845-54783864 Msa0077750:intron 45.0%
!! TGGTGATGTTCTTTTGGACG+AGG - chr1_2:54783865-54783884 Msa0077750:intron 45.0%
! TGTTCTTTTGGACGAGGTAC+GGG - chr1_2:54783871-54783890 Msa0077750:intron 45.0%
! TACGGGGATTTGGTCTCATA+TGG - chr1_2:54783888-54783907 Msa0077750:intron 45.0%
TGCATTTAGAGGTCCGAGTT+TGG + chr1_2:54784051-54784070 None:intergenic 45.0%
! ACTGTGCTGCTAAGAAATGG+AGG + chr1_2:54784514-54784533 None:intergenic 45.0%
ATGGAGTACATCAAGCAACG+GGG + chr1_2:54784595-54784614 None:intergenic 45.0%
CTTTCAACTTGGACTACAGC+AGG + chr1_2:54784876-54784895 None:intergenic 45.0%
! AGCACTGGAGACTTTCAACT+TGG + chr1_2:54784887-54784906 None:intergenic 45.0%
GTTGAAAGTCTCCAGTGCTA+TGG - chr1_2:54784888-54784907 Msa0077750:intron 45.0%
GCCAATGGAACAAGAAGAGA+AGG + chr1_2:54784969-54784988 None:intergenic 45.0%
TCTCTTCTTGTTCCATTGGC+CGG - chr1_2:54784969-54784988 Msa0077750:intron 45.0%
TGTTAAGTTACACGCCTTGC+GGG - chr1_2:54785212-54785231 Msa0077750:intron 45.0%
TACAACAGGGTTCCAGTTTC+TGG - chr1_2:54785330-54785349 Msa0077750:intron 45.0%
TGTGTAGAGGGGAATTTGGA+TGG - chr1_2:54785616-54785635 Msa0077750:intron 45.0%
GTGTAGAGGGGAATTTGGAT+GGG - chr1_2:54785617-54785636 Msa0077750:intron 45.0%
!! TTTTGGTGTGGCGTTTCTTC+CGG + chr1_2:54786142-54786161 None:intergenic 45.0%
CTGGGAAATTCTCCAACTAC+GGG - chr1_2:54786307-54786326 Msa0077750:intron 45.0%
GAAATTCTCCAACTACGGGA+AGG - chr1_2:54786311-54786330 Msa0077750:intron 45.0%
TAGCTCACCAAACCTCAGAT+TGG + chr1_2:54786715-54786734 None:intergenic 45.0%
GTAATGTCTTCTCCTTCAGG+TGG - chr1_2:54786760-54786779 Msa0077750:CDS 45.0%
TGAAGATCATCTCCACCTGA+AGG + chr1_2:54786775-54786794 None:intergenic 45.0%
ACTGGAAAAGGCAATGACCA+AGG + chr1_2:54786887-54786906 None:intergenic 45.0%
! TGGTCATTGCCTTTTCCAGT+TGG - chr1_2:54786887-54786906 Msa0077750:intron 45.0%
! CATTGCCTTTTCCAGTTGGA+TGG - chr1_2:54786891-54786910 Msa0077750:intron 45.0%
TCATGCCATCCAACTGGAAA+AGG + chr1_2:54786899-54786918 None:intergenic 45.0%
!! ATACAAAACAGGCACCGAAG+AGG + chr1_2:54787486-54787505 None:intergenic 45.0%
GTTCTTCAACCAATGCCCTT+AGG - chr1_2:54787692-54787711 Msa0077750:intron 45.0%
! TACGTCGATTGTCACCCTAA+GGG + chr1_2:54787710-54787729 None:intergenic 45.0%
!! CTCTAGAGCTTGCTCATGAA+GGG - chr1_2:54787806-54787825 Msa0077750:intron 45.0%
! TGTTTTCATGGCACTGCTTG+GGG + chr1_2:54787832-54787851 None:intergenic 45.0%
! GTGTTTTCATGGCACTGCTT+GGG + chr1_2:54787833-54787852 None:intergenic 45.0%
TCTCTCTTTCAAGGAGGCAA+CGG + chr1_2:54787956-54787975 None:intergenic 45.0%
AGGACATCTCTCTTTCAAGG+AGG + chr1_2:54787962-54787981 None:intergenic 45.0%
!! GCCTCCATCATCTAGTTCTT+AGG + chr1_2:54787982-54788001 None:intergenic 45.0%
TTCGTAGAGGAAGTCTGAGA+TGG - chr1_2:54788081-54788100 Msa0077750:intron 45.0%
! CACACTTTGGTGCAAGTATG+AGG + chr1_2:54788605-54788624 None:intergenic 45.0%
CTCATACTTGCACCAAAGTG+TGG - chr1_2:54788603-54788622 Msa0077750:intron 45.0%
!! TGTGTCCAACTTTTCTGGCA+TGG + chr1_2:54788799-54788818 None:intergenic 45.0%
AAATGACGCACTTTCCCTTG+AGG - chr1_2:54788918-54788937 Msa0077750:intron 45.0%
TTGGGATGATCCTTCCTCAA+GGG + chr1_2:54788935-54788954 None:intergenic 45.0%
AGCTACTGATAGAGTTTGCC+CGG - chr1_2:54789194-54789213 Msa0077750:CDS 45.0%
TGACAACAACATCGGTAGTC+CGG + chr1_2:54789216-54789235 None:intergenic 45.0%
AGCAGGGAAACCAAAAGATG+GGG + chr1_2:54789372-54789391 None:intergenic 45.0%
GGACCCAAGCATGAAAATCA+AGG + chr1_2:54789405-54789424 None:intergenic 45.0%
AACACACAAGTGGAGATGCA+TGG + chr1_2:54789498-54789517 None:intergenic 45.0%
TCTGTCTTAGACAGCCAACA+AGG + chr1_2:54789585-54789604 None:intergenic 45.0%
! GCTGTCTAAGACAGATGATG+TGG - chr1_2:54789590-54789609 Msa0077750:CDS 45.0%
GGGTGAGGGTAAAAAATGCT+TGG - chr1_2:54789853-54789872 Msa0077750:intron 45.0%
GGTGGCTTTCCTTGAAACTA+AGG + chr1_2:54789906-54789925 None:intergenic 45.0%
CATCTGGCGTCTCAATATTG+AGG + chr1_2:54789934-54789953 None:intergenic 45.0%
AGAAGGCTCTCTTGTCATTC+AGG - chr1_2:54790171-54790190 Msa0077750:CDS 45.0%
! CTACTACCGTTACTTTGCAG+TGG + chr1_2:54790327-54790346 None:intergenic 45.0%
GGTGAAATTGTTACACCCTC+CGG - chr1_2:54790415-54790434 Msa0077750:intron 45.0%
TGCTTACAATAGTGACCGGA+GGG + chr1_2:54790433-54790452 None:intergenic 45.0%
TTGCTTACAATAGTGACCGG+AGG + chr1_2:54790434-54790453 None:intergenic 45.0%
CTTGCTAAAAGCTACACCTC+TGG + chr1_2:54790568-54790587 None:intergenic 45.0%
!! CAGAGGTGTAGCTTTTAGCA+AGG - chr1_2:54790566-54790585 Msa0077750:CDS 45.0%
!!! TCGTCCTAGTTTTAGACACC+AGG - chr1_2:54791204-54791223 Msa0077750:intron 45.0%
GACACCAGGACATTGGATTT+AGG - chr1_2:54791218-54791237 Msa0077750:intron 45.0%
ACAGTCAGCTTAACGCCTAA+AGG - chr1_2:54791500-54791519 Msa0077750:intron 45.0%
!! TGAAACTGCTGCCACTTTCA+AGG + chr1_2:54791651-54791670 None:intergenic 45.0%
ACGAAGGTGGAACTATTCGA+AGG + chr1_2:54791701-54791720 None:intergenic 45.0%
AGATTCAAGGCATGCAACGA+AGG + chr1_2:54791717-54791736 None:intergenic 45.0%
TCGAAGGCAACTAGAACTCA+CGG + chr1_2:54791774-54791793 None:intergenic 45.0%
! GCTGCGTTGATCAAAGTTCT+TGG - chr1_2:54791800-54791819 Msa0077750:intron 45.0%
GACCGTGATAAAGTCCTCTA+AGG - chr1_2:54791856-54791875 Msa0077750:intron 45.0%
AACAAGATGGGGTGCATTTG+AGG + chr1_2:54791915-54791934 None:intergenic 45.0%
GAGGCAGTTGTTGTCAAACT+TGG - chr1_2:54791953-54791972 Msa0077750:intron 45.0%
GCAGTTGTTGTCAAACTTGG+TGG - chr1_2:54791956-54791975 Msa0077750:intron 45.0%
CTTCGTCCAGAATTTGTCTC+AGG - chr1_2:54792022-54792041 Msa0077750:intron 45.0%
CTCAGGAATAGATGCCAAAG+TGG - chr1_2:54792039-54792058 Msa0077750:intron 45.0%
CTTTCGTAATCCATGAGCAC+GGG + chr1_2:54792068-54792087 None:intergenic 45.0%
GCTTTCGTAATCCATGAGCA+CGG + chr1_2:54792069-54792088 None:intergenic 45.0%
CTATTGTGGCATTCCATGGA+AGG - chr1_2:54792318-54792337 Msa0077750:intron 45.0%
GGCCATATCTTTCTATGGCA+TGG - chr1_2:54792541-54792560 Msa0077750:intron 45.0%
TGTGTTCATCATCTTGGCGA+TGG - chr1_2:54792949-54792968 Msa0077750:CDS 45.0%
ATATCTTGTCTGTCAAGGGC+TGG - chr1_2:54793052-54793071 Msa0077750:intron 45.0%
AGTGTTTCCTCTATGACACC+GGG - chr1_2:54793109-54793128 Msa0077750:CDS 45.0%
GTCAAGAAACTTTGAGCTCC+CGG + chr1_2:54793130-54793149 None:intergenic 45.0%
GACAAGCAAAATCACTGCTG+AGG + chr1_2:54793389-54793408 None:intergenic 45.0%
ATTCATGTGGTCATCCAACG+AGG + chr1_2:54793496-54793515 None:intergenic 45.0%
TCATCAAATTCCGTCACGCT+AGG + chr1_2:54793522-54793541 None:intergenic 45.0%
GACCGATGCAAACAACAAGT+AGG + chr1_2:54793545-54793564 None:intergenic 45.0%
! TGTTTGCATCGGTCAAATGG+CGG - chr1_2:54793551-54793570 Msa0077750:CDS 45.0%
TCAAGCAGTTCAACGAGGAT+GGG + chr1_2:54793859-54793878 None:intergenic 45.0%
TCTTGCACAGGAAATTCTGC+AGG - chr1_2:54793903-54793922 Msa0077750:CDS 45.0%
CAGGAAATAGAGTCCTTGAG+TGG - chr1_2:54793922-54793941 Msa0077750:CDS 45.0%
GGAAATAGAGTCCTTGAGTG+GGG - chr1_2:54793924-54793943 Msa0077750:CDS 45.0%
TGGCCATTTAAAGGGAAAGG+TGG - chr1_2:54794040-54794059 Msa0077750:five_prime_UTR 45.0%
!! TTTATTATATAATATATTTG+GGG - chr1_2:54776776-54776795 Msa0077750:intron 5.0%
!! ATATATATATATATATATAG+GGG - chr1_2:54777959-54777978 Msa0077750:CDS 5.0%
!! TAAAATATTAAAATTCTATT+AGG - chr1_2:54778478-54778497 Msa0077750:intron 5.0%
!! TATATATATATATATATATG+GGG + chr1_2:54778805-54778824 None:intergenic 5.0%
!! TTGATATAAAATAATAAAAT+TGG + chr1_2:54782157-54782176 None:intergenic 5.0%
!! AAAAAAAAAAAAAAAAAAAG+TGG + chr1_2:54785858-54785877 None:intergenic 5.0%
!! TAAATAAATTATCATATATT+TGG + chr1_2:54791141-54791160 None:intergenic 5.0%
!! AAAATGAATATTTATTTATA+AGG + chr1_2:54793356-54793375 None:intergenic 5.0%
CTGCAAGGCAGTAGGGTTTA+GGG + chr1_2:54775445-54775464 None:intergenic 50.0%
AGAGAAGCTGCAAGGCAGTA+GGG + chr1_2:54775452-54775471 None:intergenic 50.0%
AAGAGAAGCTGCAAGGCAGT+AGG + chr1_2:54775453-54775472 None:intergenic 50.0%
TACAGAGCGCGGTTGAAAAG+AGG + chr1_2:54775477-54775496 None:intergenic 50.0%
!! CTTCGTTTTGGTACAGAGCG+CGG + chr1_2:54775488-54775507 None:intergenic 50.0%
GAAGTTACCTTGAGCAGCGA+TGG + chr1_2:54775726-54775745 None:intergenic 50.0%
GGGTGCAACACTACCTAGAA+TGG - chr1_2:54776447-54776466 Msa0077750:intron 50.0%
TGGGCTTCAGCCTGATAAGA+AGG - chr1_2:54776724-54776743 Msa0077750:intron 50.0%
CTCAGGCATATCCAGCTATG+TGG + chr1_2:54777114-54777133 None:intergenic 50.0%
CATAGCTGGATATGCCTGAG+TGG - chr1_2:54777114-54777133 Msa0077750:CDS 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG - chr1_2:54777277-54777296 Msa0077750:CDS 50.0%
AGGGAGGGAGTTGTGAAAAG+GGG - chr1_2:54777690-54777709 Msa0077750:CDS 50.0%
TCCTCATGGAATGCACACGA+AGG - chr1_2:54778637-54778656 Msa0077750:CDS 50.0%
TCCTTCGTGTGCATTCCATG+AGG + chr1_2:54778641-54778660 None:intergenic 50.0%
TAAGGATGAAGACTGCCAGC+AGG - chr1_2:54779531-54779550 Msa0077750:CDS 50.0%
GCTGTACACAGCTCAGTTCT+TGG - chr1_2:54779808-54779827 Msa0077750:intron 50.0%
CATAGGATAACAGTCGGGGA+TGG + chr1_2:54780536-54780555 None:intergenic 50.0%
CATCCCCGACTGTTATCCTA+TGG - chr1_2:54780534-54780553 Msa0077750:intron 50.0%
AGCCCATAGGATAACAGTCG+GGG + chr1_2:54780540-54780559 None:intergenic 50.0%
CAGCCCATAGGATAACAGTC+GGG + chr1_2:54780541-54780560 None:intergenic 50.0%
!! CCACATAATCGTTGGGTTGG+GGG - chr1_2:54780772-54780791 Msa0077750:intron 50.0%
! TTGGAGGTGTACAAAGTCGG+GGG - chr1_2:54780822-54780841 Msa0077750:intron 50.0%
GTGTACAAAGTCGGGGGTTA+TGG - chr1_2:54780828-54780847 Msa0077750:CDS 50.0%
!! CCACATAATCGTTGGGTTGG+GGG - chr1_2:54780772-54780791 Msa0077750:intron 50.0%
TGTGGTGTACAAAGTAGGGG+TGG - chr1_2:54781232-54781251 Msa0077750:intron 50.0%
AAGCTGCTGTCTGGTAAGTG+TGG - chr1_2:54781769-54781788 Msa0077750:intron 50.0%
TCACCAATTGTATGCAGGGC+AGG + chr1_2:54782662-54782681 None:intergenic 50.0%
GACTGTAGGAATGGCCGAAT+AGG - chr1_2:54783326-54783345 Msa0077750:intron 50.0%
GTACTAGACGGGGTCCTATT+CGG + chr1_2:54783343-54783362 None:intergenic 50.0%
CAATCGCAGACATCGATACC+TGG - chr1_2:54783457-54783476 Msa0077750:intron 50.0%
TCCCACTCAGCCTTCAGAAT+AGG + chr1_2:54783830-54783849 None:intergenic 50.0%
! GTTCTTTTGGACGAGGTACG+GGG - chr1_2:54783872-54783891 Msa0077750:intron 50.0%
GGCAACAAACAGTGCACAGA+GGG + chr1_2:54784387-54784406 None:intergenic 50.0%
AGGCAACAAACAGTGCACAG+AGG + chr1_2:54784388-54784407 None:intergenic 50.0%
TACAGCAGGAACACCTACAC+AGG + chr1_2:54784862-54784881 None:intergenic 50.0%
GACTCGTACCTGATCATCAC+CGG + chr1_2:54784991-54785010 None:intergenic 50.0%
GTCTGTAAGGGTTGCTTCCA+TGG - chr1_2:54785182-54785201 Msa0077750:intron 50.0%
GTTAAGTTACACGCCTTGCG+GGG - chr1_2:54785213-54785232 Msa0077750:intron 50.0%
TCTCCTTGCTCAAGGGAATC+CGG - chr1_2:54786530-54786549 Msa0077750:intron 50.0%
CTGAAGTCATGCCATCCAAC+TGG + chr1_2:54786905-54786924 None:intergenic 50.0%
TGCAGGGCTCTACATAAGCA+GGG + chr1_2:54786932-54786951 None:intergenic 50.0%
ATGCAGGGCTCTACATAAGC+AGG + chr1_2:54786933-54786952 None:intergenic 50.0%
TCAATTCTACACGGGGTTGC+AGG - chr1_2:54786977-54786996 Msa0077750:intron 50.0%
GGGGTTGCAGGATAAAGCAA+AGG - chr1_2:54786989-54787008 Msa0077750:intron 50.0%
! GATTGTCACCCTAAGGGCAT+TGG + chr1_2:54787704-54787723 None:intergenic 50.0%
! CTACGTCGATTGTCACCCTA+AGG + chr1_2:54787711-54787730 None:intergenic 50.0%
! CCTTCATGAGCAAGCTCTAG+AGG + chr1_2:54787808-54787827 None:intergenic 50.0%
!! CCTCTAGAGCTTGCTCATGA+AGG - chr1_2:54787805-54787824 Msa0077750:intron 50.0%
! GGTGTTTTCATGGCACTGCT+TGG + chr1_2:54787834-54787853 None:intergenic 50.0%
AGTGCCATGAAAACACCGCT+CGG - chr1_2:54787837-54787856 Msa0077750:CDS 50.0%
! TGGGGGTAGGGTACTAGAAA+AGG + chr1_2:54787918-54787937 None:intergenic 50.0%
!! TTTTCTAGTACCCTACCCCC+AGG - chr1_2:54787917-54787936 Msa0077750:CDS 50.0%
! TTTCTAGTACCCTACCCCCA+GGG - chr1_2:54787918-54787937 Msa0077750:CDS 50.0%
TCTCTTTCAAGGAGGCAACG+GGG + chr1_2:54787954-54787973 None:intergenic 50.0%
CTCTCTTTCAAGGAGGCAAC+GGG + chr1_2:54787955-54787974 None:intergenic 50.0%
! AGAGGAAGTCTGAGATGGCT+TGG - chr1_2:54788086-54788105 Msa0077750:intron 50.0%
GTTGGGATGATCCTTCCTCA+AGG + chr1_2:54788936-54788955 None:intergenic 50.0%
GTTTCGGAAAGACTTGACGG+CGG + chr1_2:54788958-54788977 None:intergenic 50.0%
GACAACAACATCGGTAGTCC+GGG + chr1_2:54789215-54789234 None:intergenic 50.0%
GTTGCGGGTGACAACAACAT+CGG + chr1_2:54789224-54789243 None:intergenic 50.0%
TGGAGAATCAGCTGTCACAC+AGG - chr1_2:54789327-54789346 Msa0077750:intron 50.0%
GAGTCAACTCGGAGAGCTTA+TGG - chr1_2:54790898-54790917 Msa0077750:intron 50.0%
AAACTATGCGCGCTGTTGTG+AGG - chr1_2:54791005-54791024 Msa0077750:intron 50.0%
TACCTCATCACGTGTACTCC+AGG - chr1_2:54791439-54791458 Msa0077750:intron 50.0%
TTCAAGGCATGCAACGAAGG+TGG + chr1_2:54791714-54791733 None:intergenic 50.0%
ATGAGCACGGGATTCCACTT+TGG + chr1_2:54792056-54792075 None:intergenic 50.0%
AAAGTGGAATCCCGTGCTCA+TGG - chr1_2:54792055-54792074 Msa0077750:intron 50.0%
GTTCATCATCTTGGCGATGG+CGG - chr1_2:54792952-54792971 Msa0077750:CDS 50.0%
CAGAGGTTGCCACAAAAGGT+CGG + chr1_2:54793589-54793608 None:intergenic 50.0%
GGTTCAGAGGTTGCCACAAA+AGG + chr1_2:54793593-54793612 None:intergenic 50.0%
CTCAAGCAGTTCAACGAGGA+TGG + chr1_2:54793860-54793879 None:intergenic 50.0%
CATCCTCGTTGAACTGCTTG+AGG - chr1_2:54793858-54793877 Msa0077750:intron 50.0%
CATCCTCAAGCAGTTCAACG+AGG + chr1_2:54793864-54793883 None:intergenic 50.0%
CGTTGAACTGCTTGAGGATG+TGG - chr1_2:54793864-54793883 Msa0077750:CDS 50.0%
GCTGCAAGGCAGTAGGGTTT+AGG + chr1_2:54775446-54775465 None:intergenic 55.0%
!!! GAACGGTCGCTTTTGAGGTG+CGG + chr1_2:54775639-54775658 None:intergenic 55.0%
!!! CGAGTGAACGGTCGCTTTTG+AGG + chr1_2:54775644-54775663 None:intergenic 55.0%
! TCGAGCGTTTGAAGTGCAGC+CGG + chr1_2:54776093-54776112 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr1_2:54777276-54777295 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr1_2:54777273-54777292 Msa0077750:CDS 55.0%
GAGCCAGTTGATTACGGGGA+CGG - chr1_2:54777738-54777757 Msa0077750:CDS 55.0%
CTCACAAGCACGAGCAATCC+CGG + chr1_2:54778976-54778995 None:intergenic 55.0%
GATTGCTCGTGCTTGTGAGG+AGG - chr1_2:54778977-54778996 Msa0077750:intron 55.0%
CACACTTCCAACGAAGGCCT+TGG - chr1_2:54779202-54779221 Msa0077750:intron 55.0%
TCAAGGACAGCAAAGCCTGC+TGG + chr1_2:54779549-54779568 None:intergenic 55.0%
ACTGCTGCACGGAGTTCAGA+AGG + chr1_2:54779988-54780007 None:intergenic 55.0%
CCCCCAACCCAACGATTATG+TGG + chr1_2:54780775-54780794 None:intergenic 55.0%
CCCCCAACCCAACGATTATG+TGG + chr1_2:54780775-54780794 None:intergenic 55.0%
! TGTGTTGGCAAGCTGCTGTC+TGG - chr1_2:54781760-54781779 Msa0077750:intron 55.0%
TTGGACGAGGTACGGGGATT+TGG - chr1_2:54783878-54783897 Msa0077750:intron 55.0%
TCCATTGGCCGGTGATGATC+AGG - chr1_2:54784980-54784999 Msa0077750:intron 55.0%
ACCTGATCATCACCGGCCAA+TGG + chr1_2:54784984-54785003 None:intergenic 55.0%
ATGTTCAATGCGACCCCGCA+AGG + chr1_2:54785229-54785248 None:intergenic 55.0%
TTGCGGGGTCGCATTGAACA+TGG - chr1_2:54785228-54785247 Msa0077750:intron 55.0%
AGCGTTGTTCACGTCCTCAC+TGG - chr1_2:54785417-54785436 Msa0077750:intron 55.0%
GCGTTGTTCACGTCCTCACT+GGG - chr1_2:54785418-54785437 Msa0077750:intron 55.0%
CGTTGTTCACGTCCTCACTG+GGG - chr1_2:54785419-54785438 Msa0077750:intron 55.0%
GCGTCAAACCTTCCCGTAGT+TGG + chr1_2:54786322-54786341 None:intergenic 55.0%
ATGCCGGATTCCCTTGAGCA+AGG + chr1_2:54786536-54786555 None:intergenic 55.0%
GTGCCATGAAAACACCGCTC+GGG - chr1_2:54787838-54787857 Msa0077750:CDS 55.0%
! ATGCCCGAGCGGTGTTTTCA+TGG + chr1_2:54787844-54787863 None:intergenic 55.0%
!! TTTCTGGGTTGATGCCCGAG+CGG + chr1_2:54787855-54787874 None:intergenic 55.0%
TTCTAGTACCCTACCCCCAG+GGG - chr1_2:54787919-54787938 Msa0077750:CDS 55.0%
TTCAACTTCCCCTGGGGGTA+GGG + chr1_2:54787930-54787949 None:intergenic 55.0%
ATTCAACTTCCCCTGGGGGT+AGG + chr1_2:54787931-54787950 None:intergenic 55.0%
ACGGGGATTCAACTTCCCCT+GGG + chr1_2:54787937-54787956 None:intergenic 55.0%
AACGGGGATTCAACTTCCCC+TGG + chr1_2:54787938-54787957 None:intergenic 55.0%
GACGCACTTTCCCTTGAGGA+AGG - chr1_2:54788922-54788941 Msa0077750:intron 55.0%
GGAAAGACTTGACGGCGGTT+GGG + chr1_2:54788953-54788972 None:intergenic 55.0%
! GCTCTCGCTTCCCCATCTTT+TGG - chr1_2:54789359-54789378 Msa0077750:CDS 55.0%
AGCCTGGAGTACACGTGATG+AGG + chr1_2:54791444-54791463 None:intergenic 55.0%
TCACGTGTACTCCAGGCTCT+TGG - chr1_2:54791446-54791465 Msa0077750:intron 55.0%
CACGTGTACTCCAGGCTCTT+GGG - chr1_2:54791447-54791466 Msa0077750:intron 55.0%
CACATAACAGCCCAAGAGCC+TGG + chr1_2:54791460-54791479 None:intergenic 55.0%
AGTGGCAGCAGTTTCAGCGT+TGG - chr1_2:54791655-54791674 Msa0077750:intron 55.0%
TCAACGCAGCGGAAGTTCGA+AGG + chr1_2:54791790-54791809 None:intergenic 55.0%
! ATGGGGTGCATTTGAGGCTG+GGG + chr1_2:54791909-54791928 None:intergenic 55.0%
! GATGGGGTGCATTTGAGGCT+GGG + chr1_2:54791910-54791929 None:intergenic 55.0%
! AGATGGGGTGCATTTGAGGC+TGG + chr1_2:54791911-54791930 None:intergenic 55.0%
TACCCAACTGCTGTTGAGGC+TGG - chr1_2:54792230-54792249 Msa0077750:intron 55.0%
ACCCAACTGCTGTTGAGGCT+GGG - chr1_2:54792231-54792250 Msa0077750:intron 55.0%
!! TTGAGCTCCCGGTGTCATAG+AGG + chr1_2:54793119-54793138 None:intergenic 55.0%
ATGTGGTCATCCAACGAGGC+AGG + chr1_2:54793492-54793511 None:intergenic 55.0%
GGTCCGTCCCCGTAATCAAC+TGG + chr1_2:54777744-54777763 None:intergenic 60.0%
GTTGATTACGGGGACGGACC+TGG - chr1_2:54777744-54777763 Msa0077750:CDS 60.0%
CGGGATTGCTCGTGCTTGTG+AGG - chr1_2:54778974-54778993 Msa0077750:intron 60.0%
GGGCCTGCCCTGCATACAAT+TGG - chr1_2:54782656-54782675 Msa0077750:CDS 60.0%
ATGATAGGACGAGCCCGGTG+TGG + chr1_2:54785446-54785465 None:intergenic 60.0%
GGGGATTCAACTTCCCCTGG+GGG + chr1_2:54787935-54787954 None:intergenic 60.0%
CGGGGATTCAACTTCCCCTG+GGG + chr1_2:54787936-54787955 None:intergenic 60.0%
TGGCAGGCGCAGTTGACAGA+AGG + chr1_2:54788332-54788351 None:intergenic 60.0%
CGGAAAGACTTGACGGCGGT+TGG + chr1_2:54788954-54788973 None:intergenic 60.0%
CCCCAGCCTCAACAGCAGTT+GGG + chr1_2:54792235-54792254 None:intergenic 60.0%
CCCAACTGCTGTTGAGGCTG+GGG - chr1_2:54792232-54792251 Msa0077750:intron 60.0%
TCCCCAGCCTCAACAGCAGT+TGG + chr1_2:54792236-54792255 None:intergenic 60.0%
! CTGTCAAGGGCTGGCATCTC+AGG - chr1_2:54793061-54793080 Msa0077750:intron 60.0%
TCTAGACCCACCTGCCTCGT+TGG - chr1_2:54793479-54793498 Msa0077750:CDS 60.0%
GGTCATCCAACGAGGCAGGT+GGG + chr1_2:54793488-54793507 None:intergenic 60.0%
TGGTCATCCAACGAGGCAGG+TGG + chr1_2:54793489-54793508 None:intergenic 60.0%
GGTCAAATGGCGGTCACAGC+TGG - chr1_2:54793561-54793580 Msa0077750:CDS 60.0%
!! CAGCTGGCTCCGACCTTTTG+TGG - chr1_2:54793577-54793596 Msa0077750:CDS 60.0%
TCGAAGGCTCTCCCCACTCA+AGG + chr1_2:54793938-54793957 None:intergenic 60.0%
AAGGTCCGGGGTTCGATCCC+CGG - chr1_2:54777319-54777338 Msa0077750:CDS 65.0%
GTCCTCACTGGGGTCCACAC+CGG - chr1_2:54785429-54785448 Msa0077750:intron 65.0%
TCCTCACTGGGGTCCACACC+GGG - chr1_2:54785430-54785449 Msa0077750:intron 65.0%
GGTGGCCGGGGATCGAACCC+CGG + chr1_2:54777327-54777346 None:intergenic 75.0%
GCCCGGTGTGGACCCCAGTG+AGG + chr1_2:54785434-54785453 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 54775404 54794196 54775404 ID=Msa0077750;Name=Msa0077750
chr1_2 mRNA 54775404 54794196 54775404 ID=Msa0077750-mRNA-1;Parent=Msa0077750;Name=Msa0077750-mRNA-1;_AED=0.08;_eAED=0.08;_QI=174|0.97|0.97|1|1|1|39|227|2081
chr1_2 exon 54775404 54775864 54775404 ID=Msa0077750-mRNA-1:exon:17060;Parent=Msa0077750-mRNA-1
chr1_2 exon 54775983 54776153 54775983 ID=Msa0077750-mRNA-1:exon:17059;Parent=Msa0077750-mRNA-1
chr1_2 exon 54776511 54776691 54776511 ID=Msa0077750-mRNA-1:exon:17058;Parent=Msa0077750-mRNA-1
chr1_2 exon 54777012 54777403 54777012 ID=Msa0077750-mRNA-1:exon:17057;Parent=Msa0077750-mRNA-1
chr1_2 exon 54777492 54778139 54777492 ID=Msa0077750-mRNA-1:exon:17056;Parent=Msa0077750-mRNA-1
chr1_2 exon 54778486 54778701 54778486 ID=Msa0077750-mRNA-1:exon:17055;Parent=Msa0077750-mRNA-1
chr1_2 exon 54779408 54779753 54779408 ID=Msa0077750-mRNA-1:exon:17054;Parent=Msa0077750-mRNA-1
chr1_2 exon 54779836 54779903 54779836 ID=Msa0077750-mRNA-1:exon:17053;Parent=Msa0077750-mRNA-1
chr1_2 exon 54779974 54780069 54779974 ID=Msa0077750-mRNA-1:exon:17052;Parent=Msa0077750-mRNA-1
chr1_2 exon 54780252 54780434 54780252 ID=Msa0077750-mRNA-1:exon:17051;Parent=Msa0077750-mRNA-1
chr1_2 exon 54780544 54780742 54780544 ID=Msa0077750-mRNA-1:exon:17050;Parent=Msa0077750-mRNA-1
chr1_2 exon 54780828 54781030 54780828 ID=Msa0077750-mRNA-1:exon:17049;Parent=Msa0077750-mRNA-1
chr1_2 exon 54782189 54782278 54782189 ID=Msa0077750-mRNA-1:exon:17048;Parent=Msa0077750-mRNA-1
chr1_2 exon 54782590 54782694 54782590 ID=Msa0077750-mRNA-1:exon:17047;Parent=Msa0077750-mRNA-1
chr1_2 exon 54782781 54782846 54782781 ID=Msa0077750-mRNA-1:exon:17046;Parent=Msa0077750-mRNA-1
chr1_2 exon 54782931 54783080 54782931 ID=Msa0077750-mRNA-1:exon:17045;Parent=Msa0077750-mRNA-1
chr1_2 exon 54783268 54783337 54783268 ID=Msa0077750-mRNA-1:exon:17044;Parent=Msa0077750-mRNA-1
chr1_2 exon 54784103 54784262 54784103 ID=Msa0077750-mRNA-1:exon:17043;Parent=Msa0077750-mRNA-1
chr1_2 exon 54784351 54784417 54784351 ID=Msa0077750-mRNA-1:exon:17042;Parent=Msa0077750-mRNA-1
chr1_2 exon 54784599 54784732 54784599 ID=Msa0077750-mRNA-1:exon:17041;Parent=Msa0077750-mRNA-1
chr1_2 exon 54785025 54785160 54785025 ID=Msa0077750-mRNA-1:exon:17040;Parent=Msa0077750-mRNA-1
chr1_2 exon 54785458 54785616 54785458 ID=Msa0077750-mRNA-1:exon:17039;Parent=Msa0077750-mRNA-1
chr1_2 exon 54785714 54785811 54785714 ID=Msa0077750-mRNA-1:exon:17038;Parent=Msa0077750-mRNA-1
chr1_2 exon 54785951 54786134 54785951 ID=Msa0077750-mRNA-1:exon:17037;Parent=Msa0077750-mRNA-1
chr1_2 exon 54786562 54786642 54786562 ID=Msa0077750-mRNA-1:exon:17036;Parent=Msa0077750-mRNA-1
chr1_2 exon 54786759 54786892 54786759 ID=Msa0077750-mRNA-1:exon:17035;Parent=Msa0077750-mRNA-1
chr1_2 exon 54787819 54787987 54787819 ID=Msa0077750-mRNA-1:exon:17034;Parent=Msa0077750-mRNA-1
chr1_2 exon 54789156 54789230 54789156 ID=Msa0077750-mRNA-1:exon:17033;Parent=Msa0077750-mRNA-1
chr1_2 exon 54789357 54789488 54789357 ID=Msa0077750-mRNA-1:exon:17032;Parent=Msa0077750-mRNA-1
chr1_2 exon 54789577 54789659 54789577 ID=Msa0077750-mRNA-1:exon:17031;Parent=Msa0077750-mRNA-1
chr1_2 exon 54789924 54790072 54789924 ID=Msa0077750-mRNA-1:exon:17030;Parent=Msa0077750-mRNA-1
chr1_2 exon 54790161 54790250 54790161 ID=Msa0077750-mRNA-1:exon:17029;Parent=Msa0077750-mRNA-1
chr1_2 exon 54790357 54790412 54790357 ID=Msa0077750-mRNA-1:exon:17028;Parent=Msa0077750-mRNA-1
chr1_2 exon 54790545 54790712 54790545 ID=Msa0077750-mRNA-1:exon:17027;Parent=Msa0077750-mRNA-1
chr1_2 exon 54792837 54792998 54792837 ID=Msa0077750-mRNA-1:exon:17026;Parent=Msa0077750-mRNA-1
chr1_2 exon 54793072 54793192 54793072 ID=Msa0077750-mRNA-1:exon:17025;Parent=Msa0077750-mRNA-1
chr1_2 exon 54793279 54793374 54793279 ID=Msa0077750-mRNA-1:exon:17024;Parent=Msa0077750-mRNA-1
chr1_2 exon 54793467 54793680 54793467 ID=Msa0077750-mRNA-1:exon:17023;Parent=Msa0077750-mRNA-1
chr1_2 exon 54793863 54794196 54793863 ID=Msa0077750-mRNA-1:exon:17022;Parent=Msa0077750-mRNA-1
chr1_2 five_prime_UTR 54794023 54794196 54794023 ID=Msa0077750-mRNA-1:five_prime_utr;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54793863 54794022 54793863 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54793467 54793680 54793467 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54793279 54793374 54793279 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54793072 54793192 54793072 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54792837 54792998 54792837 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54790545 54790712 54790545 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54790357 54790412 54790357 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54790161 54790250 54790161 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54789924 54790072 54789924 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54789577 54789659 54789577 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54789357 54789488 54789357 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54789156 54789230 54789156 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54787819 54787987 54787819 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54786759 54786892 54786759 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54786562 54786642 54786562 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54785951 54786134 54785951 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54785714 54785811 54785714 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54785458 54785616 54785458 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54785025 54785160 54785025 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54784599 54784732 54784599 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54784351 54784417 54784351 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54784103 54784262 54784103 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54783268 54783337 54783268 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54782931 54783080 54782931 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54782781 54782846 54782781 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54782590 54782694 54782590 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54782189 54782278 54782189 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54780828 54781030 54780828 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54780544 54780742 54780544 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54780252 54780434 54780252 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54779974 54780069 54779974 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54779836 54779903 54779836 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54779408 54779753 54779408 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54778486 54778701 54778486 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54777492 54778139 54777492 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54777012 54777403 54777012 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54776511 54776691 54776511 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54775983 54776153 54775983 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 CDS 54775631 54775864 54775631 ID=Msa0077750-mRNA-1:cds;Parent=Msa0077750-mRNA-1
chr1_2 three_prime_UTR 54775404 54775630 54775404 ID=Msa0077750-mRNA-1:three_prime_utr;Parent=Msa0077750-mRNA-1
Gene Sequence

>Msa0077750

ATGGCAAATTCCTTGGCTTCTCAATTACAAGCTATCAGATCCATAGCACTTACTGATTCCGCACCTCAAAAGCGACCGTTCACTCGTCCTTCTATCTTGTTCGATCCTAAAGAAGCCGCTGATAAGAGTACTGAATCCATTTACACCATCGCTGCTCAAGGATTGGAGGTTCTCATTAGCACCGATGAAAGGTTTAGGAATTATAAGAATAGTTTGTTCAGTCCCCAGAGTAAAGAATTGGATAGAGGGTTAAAGACAGAAGACGAGAATAAACAACTTAATTCTTTGATTAATCTGTATTTGAAACTACTTTCTGGATATTTTAATCTTCCGGCTGCACTTCAAACGCTCGAGTATTTGATACGTGTATACAAGATACATGAGCACAATGTTGAGGATTTGATTTTGTGTGCATTGCCGTACCACGAAACACATGCATTTGTTCGTGTAGTACAGATACTTAAGATACGGAATGGTATATGGGAGTTTCTTAAAGGTGTGAAAGACTCGGGTGCAACACTACCTAGAATGGTTATAGTGCAGCAATGTCTTCGTGATTGTGGTGTATTATTAAAAAAATTATGCGACTATGCATCTCCATCCAAAAATCCTTCAAAGAATGTAATTGGCTTTTGTACTGCTGTTGTTGTTGAAGTTTTGGGTGTGAGGGTTGATGAAGATATTGTCAAAATCATATATCCTTTCGTGAATTCTGGGCTTCAGCCTGATAAGAAGGATCTTTCAGATCACAAGGCAAGTTCATTGATGATAGTTTGCTTGCTTGGACATAAAACAACATTAGCTCCATCACTTTTGAATGGTTTGATACGTTCAGTTGCCGGGATTGCTCGTGCTTGTGAGGAGGCTAAAGATCTTCATTGGTTTCGGTTGTCCCTTATTGCCTTAATCAATCTTGTCCAGTCCCAAAATGTTGACACACTTCCAACGAAGGCCTTGGATGTTTTAAAGAAACTAAGGGATTTGCCTGGGGTTTTATTAGAATTGTCTAAGGAGTTCAACATTGAAAAGTTTCTAGTTGTTCTGTTGGACTCCCTAATTATCTGCAGTTCTAAGGATGAAGACTGCCAGCAGGCTTTGCTGTCCTTGATAGAAAAGGTCCCCATAAATGACTCTGTTCATCATGTGGTTACCAAGATCCTATCAACTTGTGTGAAACTATCAGAAAAAGTTGGTGACTCAACATCTTCGATGTCAGCTGGCTGGGCAAAAGAGACTCTGAAAATTGTTGATGTGAAGTATCCTTCTGAACTCCGTGCAGCAGTTCATCATTTTCTTCAGCAGCATAACGCAGCACATTCTAAGAAAGACAATTCATTGTATAAGATTTTATGTAAGATGTTGGATGGCAATTTGGATTCATCATCTGATATCTCGATGTCAAAAGTTTGGTTTGGCTTGTATCATCCAAAGGCTGATATTAGACGTACTACACTGCTTGATATAAATTCTTCGGGCATCTTGAAAAACAAGGCATTTGTTTCAGAGGGTCTTATTGACATCCTAGAGGCCATATTGAGACAGTTTGATGATGAAGATCTAACAGTTGTTCAAGCAGCTTTAAATGTCGATGGCTTGGAAAACGTACCAGATTCTTCTAAGCTTCTCGAGGCACTGCAAAATGTGCTAAGAAGATGTGTTGGCAAGCTGCTGTCTGGTTCAACCGAAAATGTTAGTCTTGCTGGTGAAGTTGCTGTCACTTGTCTAAAGAAAGCCATATCATACTTCCATGATCAGTACTTGGAAAGCATCGCTGCCATGATTTATCCATTACTCCTTGCTATGCCACAGACACAGGACTTAAATTTAAAAGCTCTGGTACTAGTCAAAGAAATTAACTGGCAACTTTATGATAATATTGCTGAAGAAACGACATCGATACCTGGTTGTTTATCTTCAATTAACTTGAAGGTTATCAAAAAATTGGCTGGCAATTTCATGGTCCACCATGAAGATAATATCGATTGGTTTGTTAAAAGCTGCAATGATACAAAATTGTCAAAGACACTATTCTTTTTTGTTCTATTGCAGTCTCTTGTGCTGATAAAACCAAAAGGTGATAATGACTTTTCTGCACTGTTTGAAAGTGTGTTTCCTATTCTGAAGGCTGAGTGGGAATCTTCAGTGAATGCTGGTGATGTTCTTTTGGACGAGTTCAATTCTGAAGTGTTAGACTTAAACTCGGACTGTAGTGCATTCTTTGATCAGCTTTTGTATGCCAAACTCGGACCTCTAAATGCAAAAGTTATGGCTTGCATATTTTGGAGGCTGATTAAAGCACTAGTGCCAGATAAATCATCAGGCAATCTACTGGATGATAGCAAGATAAAGGATCTGTTTGTATTTTTCGCTTTGTCAAAGTTCGGAAATGCTTTCCATGAACACCTCCATTTCTTAGCAGCACAGTTCAGATCTGCCCACCTATTATCTAAGTTTTTTACAGACGAAGGTGTTCCTGCTGTAGTCCAAGTTGAAAGTCTCCAGTGCTATGGATCTCTTTGTACTCTGCAGCAAAATGGATGTCAAACTGATATTTTGGCTGAATTTCCTTCTCTTCTTGTTCCATTGGCCGGTGATGATCAGTCTGTAAGGGTTGCTTCCATGGAGTGTATTGTTAAGTTACACGCCTTGCGGGGTCGCATTGAACATGGGTTCCAGTTTCTGGAAGAACTTCTAATTGCGTTGGTTCAGATAAAAAAACTTATATTGTCTGACAAGAAAATTCTCTCAGCGTTGTTCACGTCCTCACTGGGGTCCACACCGGGCTCGTCCTATCATAATATCCTATTACCTCCAAATATGCAAAACAGGTTTGCTAAAAAAGAAGAAATACTTGAGTTCATTTTGGGTTATACTGGGAAATTCTCCAACTACGGGAAGCTAATGATTCTCTCCTTGCTCAAGGGAATCCGGCATCCTAAAATATCATCAATGCTGTCTAATTTAATGGAGCGATACTATAATAAACACGGCAATTCTTTCCAGAAATTTTCAAACACTGAAACTAGGATACTGTGTCTTTTGTTGGAGAACTGTGTAATGTCTTCTCCTTCAGGTGGAGATGATCTTCAAAACTCTTTACAGAAAGTGTTGCAGTTGGATGGCATGACTTCAGACAACCCTGCTTATGTAGAGCCCTGCATCACTGTCTTGAAAAAGCTTAATAGTCAATTCTACACGGGGTTGCAGGATAAAGCAAAGGAGCAATTATGTCTTGCACTTGTGTTTCTGTGCCGTAATGCTAATGGTGATGTACAAATTGCAACTAGAGAGGCCTTGATGCGCATAAATATAGATTTCAAAACTGTTGGCCGCATACTTGACCTCATACTTGCACCAAAGTGTGGCAAAATTAGGTCAGCAGACAAAAAGAGACAGAAATTGACAACACATCATGAAGAAGAACTTGATGACATATGCAGAATAGATAATCTGGTCGACAGTCTTAGTTCCCTTCTTGATGTTTTGTTACTGAAGAAAGACATAACAAACAGGCATTCTCTCTTAGACCCTTTATTTAAACTTCTTAGCGAAGTATTTTCAGAAGAATGGGTAAATGACGCACTTTCCCTTGAGGAAGGATCATCCCAACCGCCGTCAAGTCTTTCCGAAACTGTAAATCATATTCAACAGACTCTATTGATTATCCTGGAGGATATAATCATGTCTCATGATAGCATGGCTGTGCTAAATGAAAAAATGACTAATGAGATTAATATTAAGCTACTGATAGAGTTTGCCCGGACTACCGATGTTGTTGTCACCCGCAACCATATATTTTCTCTGCTTTCTGCTGTCATTAGAGTCTTACCAGAAAAAGTGTTTGGGCATCTAATTGATATTCTTCCAGTTATTGGAGAATCAGCTGTCACACAGATCGACAGTCATTCAAAGCATGTATTTGAGGATCTTATATCTGCGATTGTTCCTTGTTGGCTGTCTAAGACAGATGATGTGGAGAAATTACTGAAGGTTTTCATAGATATATTTCCTGAAATTGTTGAGCACAGAAGGCTATCAATTGTTTTATATCTCCTACGAACTTTGGGTGAGGGTAAAAAATGCTTGGCCTCATTACTTATATTGTTGTTCACTTCCTTAGTTTCAAGGAAAGCCACCTGTTTCCTCAATATTGAGACGCCAGATGCTTTAACATTTTGTACTATAGAGTGGGAATATAAATTAGCAGTGCAGATTTGTGAACAGTATACAAGTATGACTTGGCTTCCTTCTTTAGTTTCCTTTTATGAACAGAGAGGAAATAAAAATGTTGACCAGTCAATGTTTCTGGAGTTGTTTCTGGCAATGCGATTTTGTTTGCAGAAGTTGCAAGATCCTGAATTGTTGTTCAAACTAGAATCAGGAGAAGGCTCTCTTGTCATTCAGAGTCAACTCGGAGAGCTTATGGAACATGTTGTTTTCCTCTTGCATCTTGTAGATGCAAGAAAAAAGGAACTAAATTTCTCTGTCATTGTGAGGAAAGAGTTGAAGGAAACTATGCGCGCTGTTGTGAGGAATATAACAATGGTTATGAGTCCTTCGATATACTTCAAGAGCATAATTAATTTGCTCGATCATTCAGATAAAGATGTTGGAGAAAAGGCTCTTGGGCTGTTATGTGATGCTGCAAGAAATCATGTAACAGTCAGCTTAACGCCTAAAGGCAACAAAGGTTCAAGATCAAGATCAAGTTCTCGTTGGCTTCAATTGGATGAAAGTTCTCAAGAATCACTTAATAATATGTGTTTAGAAATTCGTAAAGTCCTTGATGACGATTCATCAAACAACTCCTTGAAAGTGGCAGCAGTTTCAGCGTTGGAAGTTCTTGCAGAAAGTTTTCCTTCGAATAGTTCCACCTTCGTTGCATGCCTTGAATCTATTATTAGAAGATGCAATACATCTCAGAACTCTGCCGTGAGTTCTAGTTGCCTTCGAACTTCCGCTGCGTTGATCAAAGTTCTTGGTCCAAAAGCACTGTCGAAACTTGATCAAATTATGACCGTGATAAAGTCCTCTAAGGATTTGGAACGAAAAGCTAACGATGTTTCCCCAGCCTCAAATGCACCCCATCTTGTTTCTGTTCTTGTTACTTTGGAGGCAGTTGTTGTCAAACTTGGTGGATTCCTAACTAAAGATTTAAAAAATATCATGGAGCTTCTGGTGCTTCGTCCAGAATTTGTCTCAGGAATAGATGCCAAAGTGGAATCCCGTGCTCATGGATTACGAAAGCTTCTTGCGGAAAAAATTCCAGTACGGCTTGCCCTGCCGCCATTGTTAGAAATATACCCAACTGCTGTTGAGGCTGGGGATAAAAGCTCAACAATTGTGTTTGATATGTTGGCAACATTTATTGGTACAATGGACAGATCATCTATTGTGGCATTCCATGGAAGGATTTTTGACTTTTGTTTGGTTGCTCTTGATCTTCGTCGAAGTCCTCATTCAGTTCAAAACATTGATTTAGTGGAAGAAGGTGTGAAGAATGCTATGCTTGCACTGACCCTAAAGCTTACAGAGAGCATGTTCAAGCCTCTTTTTATAAGGAGTATTGAGTGGGTAGTCGATGAAACTGTATCTTCAGGAAGCATGGATAGGGCCATATCTTTCTATGGCATGGTAAATAAGCTTGCTGAGAACCATCGGTCATTGTTTGTTCCTTACTTCAAATACTTGCTTAGTAACTGTGTTCATCATCTTGGCGATGGCGGAGACCTTAAAATGTTTAGTTCGAGTCAGAAGAAAAAGAAGGCTAAGATTTTGGGTGACGGCGATGTAAAAGAAACAGATATCTTGTCTGTCAAGGGCTGGCATCTCAGGACACTAATGTTGTTGAAACCTATTGTTTCTCAACTTGATCTAGACCCACCTGCCTCGTTGGATGACCACATGAATATACCTAGCGTGACGGAATTTGATGACCTACTTGTTGTTTGCATCGGTCAAATGGCGGTCACAGCTGGCTCCGACCTTTTGTGGCAACCTCTGAACCGCGAAGTTTTGATGCAGACACAACGTACCGAGAAGACACGAGCTAGAATATTGGGTCTTAGAATTGTTAAATACCTTGTAGATAACTTGAAAGAAGAATATTCAGTGTTATTAGCTGAAACAATTCCCATCCTCGTTGAACTGCTTGAGGATGTGGAACTTTCAGTTAAATCTCTTGCACAGGAAATTCTGCAGGAAATAGAGTCCTTGAGTGGGGAGAGCCTTCGAGACTACCTATGA
Protein sequence

>Msa0077750

MANSLASQLQAIRSIALTDSAPQKRPFTRPSILFDPKEAADKSTESIYTIAAQGLEVLISTDERFRNYKNSLFSPQSKELDRGLKTEDENKQLNSLINLYLKLLSGYFNLPAALQTLEYLIRVYKIHEHNVEDLILCALPYHETHAFVRVVQILKIRNGIWEFLKGVKDSGATLPRMVIVQQCLRDCGVLLKKLCDYASPSKNPSKNVIGFCTAVVVEVLGVRVDEDIVKIIYPFVNSGLQPDKKDLSDHKASSLMIVCLLGHKTTLAPSLLNGLIRSVAGIARACEEAKDLHWFRLSLIALINLVQSQNVDTLPTKALDVLKKLRDLPGVLLELSKEFNIEKFLVVLLDSLIICSSKDEDCQQALLSLIEKVPINDSVHHVVTKILSTCVKLSEKVGDSTSSMSAGWAKETLKIVDVKYPSELRAAVHHFLQQHNAAHSKKDNSLYKILCKMLDGNLDSSSDISMSKVWFGLYHPKADIRRTTLLDINSSGILKNKAFVSEGLIDILEAILRQFDDEDLTVVQAALNVDGLENVPDSSKLLEALQNVLRRCVGKLLSGSTENVSLAGEVAVTCLKKAISYFHDQYLESIAAMIYPLLLAMPQTQDLNLKALVLVKEINWQLYDNIAEETTSIPGCLSSINLKVIKKLAGNFMVHHEDNIDWFVKSCNDTKLSKTLFFFVLLQSLVLIKPKGDNDFSALFESVFPILKAEWESSVNAGDVLLDEFNSEVLDLNSDCSAFFDQLLYAKLGPLNAKVMACIFWRLIKALVPDKSSGNLLDDSKIKDLFVFFALSKFGNAFHEHLHFLAAQFRSAHLLSKFFTDEGVPAVVQVESLQCYGSLCTLQQNGCQTDILAEFPSLLVPLAGDDQSVRVASMECIVKLHALRGRIEHGFQFLEELLIALVQIKKLILSDKKILSALFTSSLGSTPGSSYHNILLPPNMQNRFAKKEEILEFILGYTGKFSNYGKLMILSLLKGIRHPKISSMLSNLMERYYNKHGNSFQKFSNTETRILCLLLENCVMSSPSGGDDLQNSLQKVLQLDGMTSDNPAYVEPCITVLKKLNSQFYTGLQDKAKEQLCLALVFLCRNANGDVQIATREALMRINIDFKTVGRILDLILAPKCGKIRSADKKRQKLTTHHEEELDDICRIDNLVDSLSSLLDVLLLKKDITNRHSLLDPLFKLLSEVFSEEWVNDALSLEEGSSQPPSSLSETVNHIQQTLLIILEDIIMSHDSMAVLNEKMTNEINIKLLIEFARTTDVVVTRNHIFSLLSAVIRVLPEKVFGHLIDILPVIGESAVTQIDSHSKHVFEDLISAIVPCWLSKTDDVEKLLKVFIDIFPEIVEHRRLSIVLYLLRTLGEGKKCLASLLILLFTSLVSRKATCFLNIETPDALTFCTIEWEYKLAVQICEQYTSMTWLPSLVSFYEQRGNKNVDQSMFLELFLAMRFCLQKLQDPELLFKLESGEGSLVIQSQLGELMEHVVFLLHLVDARKKELNFSVIVRKELKETMRAVVRNITMVMSPSIYFKSIINLLDHSDKDVGEKALGLLCDAARNHVTVSLTPKGNKGSRSRSSSRWLQLDESSQESLNNMCLEIRKVLDDDSSNNSLKVAAVSALEVLAESFPSNSSTFVACLESIIRRCNTSQNSAVSSSCLRTSAALIKVLGPKALSKLDQIMTVIKSSKDLERKANDVSPASNAPHLVSVLVTLEAVVVKLGGFLTKDLKNIMELLVLRPEFVSGIDAKVESRAHGLRKLLAEKIPVRLALPPLLEIYPTAVEAGDKSSTIVFDMLATFIGTMDRSSIVAFHGRIFDFCLVALDLRRSPHSVQNIDLVEEGVKNAMLALTLKLTESMFKPLFIRSIEWVVDETVSSGSMDRAISFYGMVNKLAENHRSLFVPYFKYLLSNCVHHLGDGGDLKMFSSSQKKKKAKILGDGDVKETDILSVKGWHLRTLMLLKPIVSQLDLDPPASLDDHMNIPSVTEFDDLLVVCIGQMAVTAGSDLLWQPLNREVLMQTQRTEKTRARILGLRIVKYLVDNLKEEYSVLLAETIPILVELLEDVELSVKSLAQEILQEIESLSGESLRDYL*