AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0030200

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030200 MtrunA17_Chr5g0443891 92.607 2110 110 6 1 2066 1 2108 0.0 3767
Msa0030200 MtrunA17_Chr5g0443841 43.590 117 55 5 1555 1666 36 146 3.22e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030200 AT3G06530.4 44.553 1533 727 37 626 2070 713 2210 0.0 1099
Msa0030200 AT3G06530.4 48.844 692 322 13 1 665 1 687 1.42e-176 595
Msa0030200 AT3G06530.5 44.553 1533 727 37 626 2070 711 2208 0.0 1099
Msa0030200 AT3G06530.5 49.130 690 321 12 1 665 1 685 4.59e-178 599
Msa0030200 AT3G06530.1 44.780 1523 727 37 626 2070 711 2197 0.0 1097
Msa0030200 AT3G06530.1 49.130 690 321 12 1 665 1 685 7.65e-178 598
Msa0030200 AT3G06530.2 44.256 1532 722 38 626 2070 713 2199 0.0 1080
Msa0030200 AT3G06530.2 48.844 692 322 13 1 665 1 687 1.02e-176 595
Msa0030200 AT3G06530.3 44.481 1522 722 38 626 2070 713 2188 0.0 1080
Msa0030200 AT3G06530.3 48.844 692 322 13 1 665 1 687 1.24e-176 594

Find 399 sgRNAs with CRISPR-Local

Find 1143 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTCAGTGTTTGAAAATTTC+TGG 0.082321 1_1:+56285836 None:intergenic
ATTGATATTCTTCCAGTTAT+TGG 0.102959 1_1:-56283156 Msa0030200:CDS
TACAACAGGGTTCCAGTTTC+TGG 0.138676 1_1:-56287137 Msa0030200:intron
AGAAATACTTGAGTTCATTT+TGG 0.152846 1_1:-56286173 Msa0030200:CDS
ATTATCACCTGCAGATAATT+AGG 0.158360 1_1:+56293217 None:intergenic
TGTTGACCAGTCAATGTTTC+TGG 0.167580 1_1:-56282354 Msa0030200:CDS
CTTCTGTGCTCAACAATTTC+AGG 0.172948 1_1:+56282714 None:intergenic
AATGCCACCTTTCCTTTAAA+TGG 0.183419 1_1:+56278410 None:intergenic
TTGGAAGTGTGTCAACATTT+TGG 0.188777 1_1:+56293452 None:intergenic
ATCAATGCTGTCTAATTTAA+TGG 0.189325 1_1:-56285890 Msa0030200:CDS
ATCTCTGATTCCATTTAAAA+AGG 0.194494 1_1:+56278288 None:intergenic
TGCTGTTGTTGTTGAAGTTT+TGG 0.200325 1_1:-56295112 Msa0030200:CDS
CTGTATTTGAAACTACTTTC+TGG 0.207940 1_1:-56295707 Msa0030200:CDS
ATTTCCTCTCTGTTCATAAA+AGG 0.208310 1_1:+56282382 None:intergenic
ACATGCTCTCTGTAAGCTTT+AGG 0.211122 1_1:+56280012 None:intergenic
AAGTTATGGCTTGCATATTT+TGG 0.215559 1_1:-56288402 Msa0030200:CDS
AATCCTTCAAAGAATGTAAT+TGG 0.216676 1_1:-56295144 Msa0030200:CDS
GCTGCAAGGCAGTAGGGTTT+AGG 0.219910 1_1:+56296261 None:intergenic
GATATGTTGGCAACATTTAT+TGG 0.222201 1_1:-56280182 Msa0030200:CDS
AACATATTATGGCCATTTAA+AGG 0.225353 1_1:-56278422 Msa0030200:three_prime_UTR
TTCTGTTAAGGAATGGTATA+TGG 0.227314 1_1:-56295363 Msa0030200:intron
CTTTCCTTGCTCAAGGGAAT+TGG 0.240940 1_1:-56285928 Msa0030200:CDS
TGGATGTCAAACTGATATTT+TGG 0.241563 1_1:-56287534 Msa0030200:CDS
TATGATCATTTGCAGTTCTA+AGG 0.249022 1_1:-56293129 Msa0030200:intron
TAAGATGTTGGATGGCAATT+TGG 0.271688 1_1:-56292477 Msa0030200:CDS
AATGTTTCTGGAGTTGTTTC+TGG 0.274972 1_1:-56282342 Msa0030200:CDS
ATGATGAACAGAGTCATTTA+TGG 0.277685 1_1:+56293061 None:intergenic
GGTATATGGGAGTTTCTTAA+AGG 0.279802 1_1:-56295349 Msa0030200:CDS
CAAGATTGATTAAGGCAATA+AGG 0.280374 1_1:+56293614 None:intergenic
TCGCTAAGAAGTTTAAATAA+AGG 0.280802 1_1:+56283587 None:intergenic
CTCTTATCAGCGGCTTCTTT+AGG 0.291025 1_1:+56296021 None:intergenic
CTGCAAGGCAGTAGGGTTTA+GGG 0.292602 1_1:+56296262 None:intergenic
TCAAGTTTCGACAGTGCTTT+TGG 0.294129 1_1:+56280636 None:intergenic
GCTGCGTTGATCAAAGTTCT+TGG 0.297231 1_1:-56280660 Msa0030200:CDS
AGAATTGAGAAGTTAGGGTT+AGG 0.306103 1_1:+56296172 None:intergenic
GATAAAGTCCTCTAAGGATT+TGG 0.308192 1_1:-56280598 Msa0030200:CDS
GAAGGAAGAATTGAGAAGTT+AGG 0.308727 1_1:+56296166 None:intergenic
CGCTAAGAAGTTTAAATAAA+GGG 0.309156 1_1:+56283588 None:intergenic
GAATGCTGGTGATGTTCTTT+TGG 0.309414 1_1:-56288615 Msa0030200:CDS
CTAAAGATCTTCATTGGTTT+CGG 0.310067 1_1:-56293642 Msa0030200:CDS
TTTGCATATTTGGAGGTAAT+AGG 0.311235 1_1:+56286996 None:intergenic
CTGTCAAGGGCTGGCATCTC+AGG 0.316846 1_1:-56279390 Msa0030200:CDS
ATATCTCGATGTCAAAAGTT+TGG 0.318754 1_1:-56292442 Msa0030200:CDS
TCTAGTTTGAACAACAATTC+AGG 0.319024 1_1:+56282287 None:intergenic
AGAAGGCTCTCTTGTCATTC+AGG 0.319624 1_1:-56282258 Msa0030200:intron
TTAGAAGTTCTTCCAGAAAC+TGG 0.324863 1_1:+56287125 None:intergenic
CTTTGTACTCTGCAGCAAAA+TGG 0.327871 1_1:-56287554 Msa0030200:CDS
CTCTTTACAGAAAGTGTTGC+AGG 0.331318 1_1:-56285659 Msa0030200:intron
ATATATCCTTTCGTGAATTC+TGG 0.333723 1_1:-56295057 Msa0030200:CDS
CGTGTTCTTCTTCTTCGTTT+TGG 0.336037 1_1:+56296207 None:intergenic
AATGGCCATAATATGTTCAT+TGG 0.337522 1_1:+56278428 None:intergenic
TCTATTCCTGAGACAAATTC+TGG 0.343670 1_1:+56280432 None:intergenic
AGCGTTGTTCACGTCCTCAC+TGG 0.343696 1_1:-56287050 Msa0030200:CDS
CATGCTCTCTGTAAGCTTTA+GGG 0.347308 1_1:+56280013 None:intergenic
TTGAGCAGCGATGGTGTAAA+TGG 0.347980 1_1:+56295990 None:intergenic
GTAGACCAATGAACATATTA+TGG 0.352074 1_1:-56278433 Msa0030200:three_prime_UTR
AGTTCAAAACATTGATTTAG+TGG 0.354050 1_1:-56280069 Msa0030200:CDS
TGTGTAATGTCTTCTCCTTC+AGG 0.354547 1_1:-56285700 Msa0030200:CDS
TTTATCTTCAATTAACTTGA+AGG 0.354964 1_1:-56288992 Msa0030200:CDS
CTGCTTGATATAAATTCTTC+GGG 0.357022 1_1:-56292251 Msa0030200:CDS
CTAAGAAATGGAGGTGTTCA+TGG 0.357685 1_1:+56287966 None:intergenic
TGTTTCTGTTCTTGTTACTT+TGG 0.358918 1_1:-56280529 Msa0030200:CDS
TATCTGCGATTGTTCCTTGT+TGG 0.359436 1_1:-56282895 Msa0030200:CDS
TTGAATATGATTTACAGTTT+CGG 0.362706 1_1:+56283490 None:intergenic
TGTTAAGTTACACGCTTTGC+GGG 0.365295 1_1:-56287255 Msa0030200:CDS
TCAATTCTACACGGGGTTGC+AGG 0.365876 1_1:-56285480 Msa0030200:CDS
GATAGGGCCATATCTTTCTA+TGG 0.367033 1_1:-56279924 Msa0030200:CDS
TGCTGCACTATAACCATTCT+AGG 0.367211 1_1:+56295301 None:intergenic
TCCTTCTCTTCTTGTTCCAT+TGG 0.368665 1_1:-56287504 Msa0030200:CDS
AGATTGCCTGATGATTTATC+TGG 0.368678 1_1:+56288358 None:intergenic
TACCTGGACAAGATTGATTA+AGG 0.369079 1_1:+56293606 None:intergenic
TTTCCTTGCTCAAGGGAATT+GGG 0.371626 1_1:-56285927 Msa0030200:CDS
CACACAAGTTGATAGGATCT+TGG 0.372295 1_1:+56293031 None:intergenic
ATCATCAAACTGTCTCAATA+TGG 0.372395 1_1:+56290949 None:intergenic
AACTGTCTCAATATGGCCTC+TGG 0.372558 1_1:+56290956 None:intergenic
AAAATTGGCTGGCAATTTCA+TGG 0.372685 1_1:-56288962 Msa0030200:CDS
TCACGTGTACTCCAGGCTCT+TGG 0.376330 1_1:-56281014 Msa0030200:intron
ACTGCTTGATATAAATTCTT+CGG 0.376474 1_1:-56292252 Msa0030200:CDS
CAGAAAGCAGAGAAAATATA+TGG 0.378151 1_1:+56283220 None:intergenic
GAAATTCTTTGCAGTCTGTA+AGG 0.379461 1_1:-56287298 Msa0030200:intron
GAGTCAACTCGGAGAGCTTA+TGG 0.379771 1_1:-56281564 Msa0030200:CDS
TGTTCACTTCCTTAGTTTCA+AGG 0.380452 1_1:-56282535 Msa0030200:CDS
CAGTCCCCAGAGTAAAGAAT+TGG 0.381140 1_1:-56295783 Msa0030200:CDS
CACCAAAGTGTGGCAAAATT+AGG 0.381449 1_1:-56283847 Msa0030200:CDS
TGCATTTAGAGGTCCGAGTT+TGG 0.383943 1_1:+56288426 None:intergenic
TTGATGATAGTTTGCTTGCT+TGG 0.385008 1_1:-56293745 Msa0030200:CDS
CTTGAACCTTTGTTGCCTTT+AGG 0.387639 1_1:+56280945 None:intergenic
ACAGCTGATTCTCCAATAAC+TGG 0.392134 1_1:+56283144 None:intergenic
AAGTTCTCGTTGGCTTCAAT+TGG 0.392921 1_1:-56280913 Msa0030200:CDS
AAAGTTTCTCATTGTTCTGT+TGG 0.393136 1_1:-56293244 Msa0030200:CDS
GGGTCGAAATTACTTGTTAG+AGG 0.393840 1_1:-56296315 None:intergenic
GGTTTGATACGTTCAGTTGC+CGG 0.395567 1_1:-56293688 Msa0030200:CDS
AAGCCAATTACATTCTTTGA+AGG 0.395856 1_1:+56295141 None:intergenic
GTCTGTAAGGGTTGCTTCCA+TGG 0.396373 1_1:-56287285 Msa0030200:CDS
GAATTGAGAAGTTAGGGTTA+GGG 0.397023 1_1:+56296173 None:intergenic
AACAATTGTGTTTGATATGT+TGG 0.397730 1_1:-56280195 Msa0030200:CDS
TATTCTAGCTCGTGTCTTCT+CGG 0.397937 1_1:+56278695 None:intergenic
CTCTATCCAATTCTTTACTC+TGG 0.397972 1_1:+56295777 None:intergenic
ACCAATCGATATTATCTTCA+TGG 0.398205 1_1:+56288935 None:intergenic
GACCGTGATAAAGTCCTCTA+AGG 0.400034 1_1:-56280604 Msa0030200:CDS
GTACAAAATGTTAAAGCATC+TGG 0.400035 1_1:+56282482 None:intergenic
GAAGACACGAGCTAGAATAT+TGG 0.402292 1_1:-56278691 Msa0030200:CDS
CTAAGCAAGTATTTGAAGTA+AGG 0.403689 1_1:+56279529 None:intergenic
TCTGAAAGATCCTTCTTATC+AGG 0.405015 1_1:+56295027 None:intergenic
AAGGAAGAATTGAGAAGTTA+GGG 0.405988 1_1:+56296167 None:intergenic
CGGAAAGACTTGACGGCGGT+TGG 0.408112 1_1:+56283510 None:intergenic
TTAGCACCGATGAAAGGTTT+AGG 0.409118 1_1:-56295826 Msa0030200:CDS
TACCCAACTGCTGTTGAGGC+TGG 0.410333 1_1:-56280230 Msa0030200:CDS
GTACATCACCATTAGCATTA+CGG 0.411573 1_1:+56285103 None:intergenic
TAATAGTCAAAGAAATTAAC+TGG 0.411747 1_1:-56289487 Msa0030200:CDS
ATAGTTTCACACAAGTTGAT+AGG 0.411967 1_1:+56293024 None:intergenic
GGACTTAAATTTAAAAGCTC+TGG 0.412126 1_1:-56289510 Msa0030200:CDS
CGTCTCAATATTGAGGAAAC+AGG 0.412781 1_1:+56282505 None:intergenic
TACCTCCAAATATGCAAAAC+AGG 0.412938 1_1:-56286991 Msa0030200:intron
AGGAGGCTAAAGATCTTCAT+TGG 0.414016 1_1:-56293648 Msa0030200:CDS
AGATCAAGTTGAGAAACAAT+AGG 0.414597 1_1:+56278994 None:intergenic
CGTTGAACTGCTTGAGGATG+TGG 0.415239 1_1:-56278589 Msa0030200:CDS
CATATGCAGAATAGATAATC+TGG 0.415561 1_1:-56283768 Msa0030200:CDS
GCAGGATGATAGCAAGATAA+AGG 0.416003 1_1:-56288032 Msa0030200:intron
CAGAGAAAATATATGGTTGC+GGG 0.417767 1_1:+56283227 None:intergenic
TCTAGCAATGGCAAATTCCT+TGG 0.418379 1_1:-56296133 Msa0030200:exon
TCCATTGGCCGGTGATGATC+AGG 0.421713 1_1:-56287489 Msa0030200:intron
CTGATCATGGAAGTATGATA+TGG 0.423107 1_1:+56289708 None:intergenic
CACGTGTACTCCAGGCTCTT+GGG 0.423504 1_1:-56281013 Msa0030200:intron
TACAGAGCGCGGTTGAAAAC+AGG 0.425470 1_1:+56296230 None:intergenic
TGAAACTGCTGCCACTTTCA+AGG 0.426613 1_1:+56280812 None:intergenic
AAGACACGAGCTAGAATATT+GGG 0.426925 1_1:-56278690 Msa0030200:CDS
TTATCACCTGCAGATAATTA+GGG 0.429558 1_1:+56293218 None:intergenic
TGATGAACAGAGTCATTTAT+GGG 0.430170 1_1:+56293062 None:intergenic
TTGTTGTTCAAACTAGAATC+AGG 0.430374 1_1:-56282281 Msa0030200:CDS
GGTCAAATGGCGGTCACAGC+TGG 0.430545 1_1:-56278892 Msa0030200:CDS
TTCTGTTCTTGTTACTTTGG+AGG 0.431905 1_1:-56280526 Msa0030200:CDS
TTGTTAAGTTACACGCTTTG+CGG 0.433714 1_1:-56287256 Msa0030200:CDS
TGTTGTTTGCATCGGTCAAA+TGG 0.435055 1_1:-56278905 Msa0030200:CDS
AGATGGGGTGCATTTGAGGC+TGG 0.435141 1_1:+56280552 None:intergenic
AACAAGATGGGGTGCATTTG+AGG 0.436206 1_1:+56280548 None:intergenic
CAGATAGATTTCAAAACTGT+TGG 0.436222 1_1:-56283893 Msa0030200:CDS
GTCGATGAAACTGTATCTTC+AGG 0.437715 1_1:-56279954 Msa0030200:CDS
TCCTCACTGGGGTCCACACC+GGG 0.439221 1_1:-56287037 Msa0030200:CDS
GCGTTGTTCACGTCCTCACT+GGG 0.440734 1_1:-56287049 Msa0030200:CDS
TCGAGAAGCTTAGAAGAATC+TGG 0.442401 1_1:+56290872 None:intergenic
ATCTTCTAATAATAGATTCA+AGG 0.442427 1_1:+56280733 None:intergenic
AAGATTGATTAAGGCAATAA+GGG 0.442710 1_1:+56293615 None:intergenic
AGTAACTGTGTTCATCATCT+TGG 0.443392 1_1:-56279508 Msa0030200:CDS
TTTCTTATAGGGATTTGCCT+GGG 0.443564 1_1:-56293302 Msa0030200:intron
TCGATGTCAAAAGTTTGGTT+TGG 0.445202 1_1:-56292437 Msa0030200:CDS
ACCTCTAAATGCAAAAGTTA+TGG 0.445268 1_1:-56288416 Msa0030200:CDS
ACTGGGAAATTCTCCAACTA+CGG 0.446747 1_1:-56286145 Msa0030200:CDS
TGGTTGTGTTTCAGGATTGG+AGG 0.446865 1_1:-56295855 Msa0030200:intron
CTAGAATTGTGTAATCATAT+AGG 0.447034 1_1:-56278467 Msa0030200:three_prime_UTR
AACATTGATTTAGTGGAAGA+AGG 0.447201 1_1:-56280062 Msa0030200:CDS
TTAGGATCGAACAAGATAGA+AGG 0.448135 1_1:+56296039 None:intergenic
CTCACAAGCACGAGCAATCC+CGG 0.449224 1_1:+56293669 None:intergenic
AGATAAAGATGTTGGAGAAA+AGG 0.450730 1_1:-56281369 Msa0030200:intron
TCTCTTCTTGTTCCATTGGC+CGG 0.453208 1_1:-56287500 Msa0030200:CDS
CACACTTCCAACGAAGGCCT+TGG 0.454043 1_1:-56293440 Msa0030200:CDS
TCATTCAAAGCATGTATTTG+AGG 0.454056 1_1:-56282924 Msa0030200:CDS
CTGAAATTGTTGAGCACAGA+AGG 0.454487 1_1:-56282713 Msa0030200:CDS
ATGCAAGGCTCTACATAAGC+AGG 0.456426 1_1:+56285527 None:intergenic
GGTGGCTTTCCTTGAAACTA+AGG 0.458786 1_1:+56282526 None:intergenic
TGAACTGTGCTGCTAAGAAA+TGG 0.461333 1_1:+56287954 None:intergenic
TCTATCCAATTCTTTACTCT+GGG 0.461382 1_1:+56295778 None:intergenic
AGGAAATTTCAGTTGGCGGT+TGG 0.463593 1_1:-56296295 Msa0030200:five_prime_UTR
GGAAAGACTTGACGGCGGTT+GGG 0.464408 1_1:+56283511 None:intergenic
GGTTCAGAGGTTGCCACAAA+AGG 0.464770 1_1:+56278863 None:intergenic
TCAAATGTCAATTAGCTGGC+TGG 0.465347 1_1:-56292716 Msa0030200:intron
TACCATGCCATAGAAAGATA+TGG 0.465493 1_1:+56279917 None:intergenic
TTCAGTTAAATCTCTTGCAC+AGG 0.468315 1_1:-56278562 Msa0030200:CDS
CTCAAGCAGTTCAACGAGGA+TGG 0.471313 1_1:+56278596 None:intergenic
GACTCAACATCTTCGATGTC+AGG 0.472414 1_1:-56292987 Msa0030200:intron
GTTTGATACGTTCAGTTGCC+GGG 0.473503 1_1:-56293687 Msa0030200:CDS
TGCCTTAATCAATCTTGTCC+AGG 0.474061 1_1:-56293608 Msa0030200:intron
CACACTTTGGTGCAAGTATG+AGG 0.477598 1_1:+56283858 None:intergenic
AGGTAATAGGATATTATGAT+AGG 0.478047 1_1:+56287009 None:intergenic
GATGGGGTGCATTTGAGGCT+GGG 0.478686 1_1:+56280553 None:intergenic
ACCCAACTGCTGTTGAGGCT+GGG 0.479632 1_1:-56280229 Msa0030200:CDS
TCCCCAGCCTCAACAGCAGT+TGG 0.481565 1_1:+56280227 None:intergenic
TTAGAGGAAATTTCAGTTGG+CGG 0.482595 1_1:-56296299 Msa0030200:five_prime_UTR
CATTGTGAGGAAAGAGTTGA+AGG 0.483626 1_1:-56281480 Msa0030200:CDS
GCGTCAAACCTTCCCGTAGT+TGG 0.484266 1_1:+56286132 None:intergenic
CTTCGTCCAGAATTTGTCTC+AGG 0.484756 1_1:-56280438 Msa0030200:CDS
GCAGTTGTTGTCAAACTTGG+TGG 0.487519 1_1:-56280504 Msa0030200:CDS
CAGAGTAAAGAATTGGATAG+AGG 0.488546 1_1:-56295776 Msa0030200:CDS
AGCTTTAAATGTCGATGGCT+TGG 0.489294 1_1:-56290903 Msa0030200:CDS
TGATAATATTGCTGAAGAAA+CGG 0.490134 1_1:-56289456 Msa0030200:intron
TGACAACAACATCAGTAGTC+CGG 0.490271 1_1:+56283250 None:intergenic
ACAGACTCTATTGATTATCC+TGG 0.490500 1_1:-56283468 Msa0030200:CDS
AGCTACTGATAGAGTTTGCC+CGG 0.490850 1_1:-56283269 Msa0030200:CDS
CTTCTTTCAAGTTATCTACA+AGG 0.490910 1_1:+56278649 None:intergenic
TGCTTTCCAAGTACTGATCA+TGG 0.491140 1_1:+56289695 None:intergenic
ATGAGCACGGGATTCCACTT+TGG 0.491601 1_1:+56280407 None:intergenic
CTTTCAACTTGGACTACAGC+AGG 0.493781 1_1:+56287596 None:intergenic
CCCAACTGCTGTTGAGGCTG+GGG 0.493988 1_1:-56280228 Msa0030200:CDS
CTCAACGAATCTAACATCAT+AGG 0.495228 1_1:+56278490 None:intergenic
TGTGTTGGCAAGCTGCTGTC+TGG 0.498264 1_1:-56290824 Msa0030200:intron
ACAGTCAGCTTAACGCCTAA+AGG 0.499628 1_1:-56280960 Msa0030200:CDS
TCTGTTAAGGAATGGTATAT+GGG 0.499920 1_1:-56295362 Msa0030200:intron
TAACAAGAACAGAAACAAGA+TGG 0.500724 1_1:+56280535 None:intergenic
AATGATTCTTTCCTTGCTCA+AGG 0.500806 1_1:-56285935 Msa0030200:CDS
TGAAGAAAGACATAACAAAC+AGG 0.501969 1_1:-56283709 Msa0030200:intron
CAAATGTCAATTAGCTGGCT+GGG 0.502489 1_1:-56292715 Msa0030200:intron
GAGGCAGTTGTTGTCAAACT+TGG 0.502858 1_1:-56280507 Msa0030200:CDS
ATATTTCTAACAATGGCGGC+AGG 0.504743 1_1:+56280252 None:intergenic
TCCTATTCTGAAGGCTGAGT+GGG 0.506035 1_1:-56288648 Msa0030200:CDS
TGGTCTTCAGCCTGATAAGA+AGG 0.506036 1_1:-56295037 Msa0030200:CDS
TATCTTCAGGAAGCATGGAT+AGG 0.507487 1_1:-56279941 Msa0030200:CDS
AACAGATATCTTGTCTGTCA+AGG 0.508062 1_1:-56279404 Msa0030200:CDS
TCCCACTCAGCCTTCAGAAT+AGG 0.509055 1_1:+56288647 None:intergenic
TACAAAGAGATCCATAGCAC+TGG 0.509387 1_1:+56287570 None:intergenic
TTTGCTGTCCTTGATAGAAA+AGG 0.510636 1_1:-56293087 Msa0030200:CDS
ATCAAACCATTCAAAAGTGA+TGG 0.511914 1_1:+56293703 None:intergenic
TCATCTATTGTGGCATTCCA+TGG 0.512846 1_1:-56280146 Msa0030200:CDS
CCCCAGCCTCAACAGCAGTT+GGG 0.512947 1_1:+56280228 None:intergenic
ATCAAACAACTCCTTGAAAG+TGG 0.513706 1_1:-56280823 Msa0030200:CDS
AAACAAGGCATTTGTTTCAG+AGG 0.513764 1_1:-56292219 Msa0030200:intron
CTAGTGCCAGATAAATCATC+AGG 0.514392 1_1:-56288364 Msa0030200:CDS
CTTGTGCTGATAAAACCAAA+AGG 0.516170 1_1:-56288847 Msa0030200:intron
CATCCTCGTTGAACTGCTTG+AGG 0.516563 1_1:-56278595 Msa0030200:CDS
GGCCATATCTTTCTATGGCA+TGG 0.516981 1_1:-56279919 Msa0030200:CDS
TTTCTGTGCCGTAATGCTAA+TGG 0.517009 1_1:-56285111 Msa0030200:CDS
TTCTTATAGGGATTTGCCTG+GGG 0.518384 1_1:-56293301 Msa0030200:intron
AGCACTGGAGACTTTCAACT+TGG 0.518538 1_1:+56287585 None:intergenic
AAGAGAAGCTGCAAGGCAGT+AGG 0.518720 1_1:+56296254 None:intergenic
GGCAACATTTATTGGTACAA+TGG 0.519554 1_1:-56280174 Msa0030200:CDS
AAAGTGGAATCCCGTGCTCA+TGG 0.520023 1_1:-56280405 Msa0030200:CDS
GTCCTCACTGGGGTCCACAC+CGG 0.522145 1_1:-56287038 Msa0030200:CDS
TTAATTGAAGATAAACATCC+AGG 0.522220 1_1:+56289000 None:intergenic
ATACTTCCATGATCAGTACT+TGG 0.522733 1_1:-56289701 Msa0030200:CDS
AAGGAGTAATGGATAAATCA+TGG 0.523492 1_1:+56289666 None:intergenic
GATCATTCAGATAAAGATGT+TGG 0.523801 1_1:-56281377 Msa0030200:CDS
CTATTGTGGCATTCCATGGA+AGG 0.527726 1_1:-56280142 Msa0030200:CDS
ATGTGGTCATCCAACGAGGC+AGG 0.528235 1_1:+56278964 None:intergenic
TCAAGGACAGCAAAGCCTGC+TGG 0.528595 1_1:+56293096 None:intergenic
ATCTTCAGGAAGCATGGATA+GGG 0.529004 1_1:-56279940 Msa0030200:CDS
TAACTTAACAATACACTCCA+TGG 0.529174 1_1:+56287268 None:intergenic
TAAATCATCAGGCAATCTAC+TGG 0.529570 1_1:-56288353 Msa0030200:intron
AACTGTATCTTCAGGAAGCA+TGG 0.529959 1_1:-56279946 Msa0030200:CDS
ACAGTTTCGGAAAGACTTGA+CGG 0.531853 1_1:+56283503 None:intergenic
TCAGTAACAAAACATCAAGA+AGG 0.531872 1_1:+56283729 None:intergenic
TTGTTAGAGGAAATTTCAGT+TGG 0.532140 1_1:-56296302 Msa0030200:five_prime_UTR
TCTAGAGCCACCTGCCTCGT+TGG 0.532500 1_1:-56278974 Msa0030200:CDS
ATTACTCCTTGCTATGCCAC+AGG 0.533955 1_1:-56289653 Msa0030200:intron
TCTTGCACAGGAAATTCTGC+AGG 0.535392 1_1:-56278550 Msa0030200:CDS
GGGTGCAACACTACCTAGAA+TGG 0.535731 1_1:-56295314 Msa0030200:CDS
ATAATTCCTAAACCTTTCAT+CGG 0.535764 1_1:+56295820 None:intergenic
AAATTCTTTGCAGTCTGTAA+GGG 0.537394 1_1:-56287297 Msa0030200:intron
CAATCGCAGACATCGATACC+TGG 0.537531 1_1:-56289018 Msa0030200:intron
GGAAGAACTTCTAATTGCGT+TGG 0.537618 1_1:-56287116 Msa0030200:CDS
CTTAATAGTCAATTCTACAC+GGG 0.538323 1_1:-56285488 Msa0030200:CDS
TGGCATACAAAAGCTGATCA+AGG 0.538573 1_1:+56288446 None:intergenic
GTTTGGCTTGTATCATCCAA+AGG 0.541542 1_1:-56292420 Msa0030200:intron
CTTAAAGGTGTGAAAGACTC+GGG 0.541680 1_1:-56295334 Msa0030200:CDS
CAAGCAGCTTTAAATGTCGA+TGG 0.545621 1_1:-56290908 Msa0030200:CDS
AAAACATCCAAGGCCTTCGT+TGG 0.546236 1_1:+56293433 None:intergenic
ATATCTTGTCTGTCAAGGGC+TGG 0.546502 1_1:-56279399 Msa0030200:CDS
GACAACAACATCAGTAGTCC+GGG 0.546932 1_1:+56283251 None:intergenic
GTTGAAAGTCTCCAGTGCTA+TGG 0.546932 1_1:-56287581 Msa0030200:CDS
ATTATGGCCATTTAAAGGAA+AGG 0.546945 1_1:-56278417 Msa0030200:three_prime_UTR
AATTATACTTCGCGGTTCAG+AGG 0.551394 1_1:+56278850 None:intergenic
TTGCGGGGTCGCATTGAACA+TGG 0.551712 1_1:-56287239 Msa0030200:intron
TGGACTCCCTAATTATCTGC+AGG 0.551807 1_1:-56293224 Msa0030200:intron
AAGATAGAAGGACGAGTGAA+CGG 0.552986 1_1:+56296051 None:intergenic
AGAGAAGCTGCAAGGCAGTA+GGG 0.553654 1_1:+56296255 None:intergenic
CATCTGGCGTCTCAATATTG+AGG 0.553929 1_1:+56282498 None:intergenic
CTTTCGTAATCCATGAGCAC+GGG 0.554981 1_1:+56280395 None:intergenic
AGTGGCAGCAGTTTCAGCGT+TGG 0.555141 1_1:-56280805 Msa0030200:CDS
GACCTACTTGTTGTTTGCAT+CGG 0.555245 1_1:-56278913 Msa0030200:CDS
AACAAGAACAGAAACAAGAT+GGG 0.555402 1_1:+56280536 None:intergenic
GACAATTCTAATAAAACCCC+AGG 0.555785 1_1:+56293285 None:intergenic
TGCGGAATCAGTAAGTGCTA+TGG 0.557132 1_1:+56296086 None:intergenic
CTGGGAAATTCTCCAACTAC+GGG 0.557628 1_1:-56286144 Msa0030200:CDS
TGTTTGATGAATCGTCATCA+AGG 0.559889 1_1:+56280838 None:intergenic
TAAGGATGAAGACTGCCAGC+AGG 0.559986 1_1:-56293111 Msa0030200:CDS
TTTCAACCTGTGGCATAGCA+AGG 0.561730 1_1:+56289647 None:intergenic
GAGACATGATTATATCCTCC+AGG 0.561844 1_1:+56283450 None:intergenic
GCAGAGAAAATATATGGTTG+CGG 0.561950 1_1:+56283226 None:intergenic
TGTGGCATAGCAAGGAGTAA+TGG 0.562119 1_1:+56289655 None:intergenic
GAACAACAATATAAGTAATG+AGG 0.562235 1_1:+56282553 None:intergenic
GAAGTTACCTTGAGCAGCGA+TGG 0.562297 1_1:+56295981 None:intergenic
GCCAATGGAACAAGAAGAGA+AGG 0.564011 1_1:+56287503 None:intergenic
ACCATGAAGATAATATCGAT+TGG 0.565898 1_1:-56288936 Msa0030200:CDS
ACTGTCTCAATATGGCCTCT+GGG 0.566125 1_1:+56290957 None:intergenic
TCAAGCAGTTCAACGAGGAT+GGG 0.566456 1_1:+56278597 None:intergenic
TTCTGATTAGCACCGATGAA+AGG 0.567079 1_1:-56295832 Msa0030200:CDS
AATATACCCAACTGCTGTTG+AGG 0.567549 1_1:-56280234 Msa0030200:CDS
AAGTGTGTTTCCTATTCTGA+AGG 0.567559 1_1:-56288657 Msa0030200:CDS
ATGGGGTGCATTTGAGGCTG+GGG 0.567866 1_1:+56280554 None:intergenic
CTAATATTGCAGAGTCAACT+CGG 0.568126 1_1:-56281575 Msa0030200:intron
CAGCAATGTCTTCGTGATTG+TGG 0.568575 1_1:-56295283 Msa0030200:CDS
TCTTAAAGGTGTGAAAGACT+CGG 0.569391 1_1:-56295335 Msa0030200:CDS
AGCTTGTAATTGAGAAGCCA+AGG 0.570228 1_1:+56296116 None:intergenic
TAGTTTCTTTAAAACATCCA+AGG 0.571442 1_1:+56293423 None:intergenic
CGGGATTGCTCGTGCTTGTG+AGG 0.575385 1_1:-56293668 Msa0030200:CDS
ACCTGATCATCACCGGCCAA+TGG 0.576742 1_1:+56287488 None:intergenic
ATAAGCTTGCTGAGAACCAT+CGG 0.577111 1_1:-56279893 Msa0030200:intron
GACTCGTACCTGATCATCAC+CGG 0.577862 1_1:+56287481 None:intergenic
TCATCAAATTCCGTCACGCT+AGG 0.579162 1_1:+56278934 None:intergenic
TGAAGATCATCTCCACCTGA+AGG 0.580784 1_1:+56285685 None:intergenic
ACAGATATCTTGTCTGTCAA+GGG 0.582471 1_1:-56279403 Msa0030200:CDS
GACACACTTTCCCTTGAGGA+AGG 0.584709 1_1:-56283539 Msa0030200:CDS
TGTGTTCATCATCTTGGCGA+TGG 0.584716 1_1:-56279502 Msa0030200:CDS
TCATAAAAGGAAACTAAAGA+AGG 0.584814 1_1:+56282395 None:intergenic
TAAATTTCTCTGTCATTGTG+AGG 0.584896 1_1:-56281493 Msa0030200:CDS
ACTCACATTTATGCGCATCA+AGG 0.585262 1_1:+56285062 None:intergenic
CTCAGGAATAGATGCCAAAG+TGG 0.587107 1_1:-56280421 Msa0030200:CDS
ATTTACACCATCGCTGCTCA+AGG 0.587470 1_1:-56295988 Msa0030200:intron
TCGAGCGTTTGAAGTGCAGC+CGG 0.587577 1_1:+56295671 None:intergenic
TCATCGCAAAATTCTAGCAA+TGG 0.587825 1_1:-56296145 Msa0030200:exon
GTTGGGTATATTTCTAACAA+TGG 0.588872 1_1:+56280245 None:intergenic
ATGATTCTTTCCTTGCTCAA+GGG 0.589553 1_1:-56285934 Msa0030200:CDS
AGAGTAAAGAATTGGATAGA+GGG 0.592118 1_1:-56295775 Msa0030200:CDS
AATCATGTCTCATGATAGCA+TGG 0.592596 1_1:-56283438 Msa0030200:CDS
TCAACGCAGCGGAAGTTCGA+AGG 0.593614 1_1:+56280673 None:intergenic
GGATTCAGTACTCTTATCAG+CGG 0.596784 1_1:+56296011 None:intergenic
AGGAAATAGAGTCTTTGAGT+GGG 0.597321 1_1:-56278530 Msa0030200:CDS
GATCAAGATCAAGTTCTCGT+TGG 0.598397 1_1:-56280923 Msa0030200:CDS
TTGCATCTACAAGATGCAAG+AGG 0.600709 1_1:+56281528 None:intergenic
ATCCTTAGAGGACTTTATCA+CGG 0.603588 1_1:+56280602 None:intergenic
GTTAAGTTACACGCTTTGCG+GGG 0.603818 1_1:-56287254 Msa0030200:CDS
TTCAAGGCATGCAACGAAGG+TGG 0.605103 1_1:+56280749 None:intergenic
TAGTACAGATACTTAACATA+CGG 0.606001 1_1:-56295461 Msa0030200:intron
ATGGCCATTTAAAGGAAAGG+TGG 0.608982 1_1:-56278414 Msa0030200:three_prime_UTR
ATATTATGATAGGACGAGCC+CGG 0.609745 1_1:+56287019 None:intergenic
AGATTCAAGGCATGCAACGA+AGG 0.610484 1_1:+56280746 None:intergenic
GTAATGTCTTCTCCTTCAGG+TGG 0.611054 1_1:-56285697 Msa0030200:CDS
ACTGCTGCACGGAGTTCAGA+AGG 0.612264 1_1:+56292657 None:intergenic
AAACTATGCGCGCTGTTGTG+AGG 0.612613 1_1:-56281457 Msa0030200:CDS
TTCCTATTCTGAAGGCTGAG+TGG 0.614009 1_1:-56288649 Msa0030200:CDS
TGGAGAATCAGCTGTCACAC+AGG 0.614162 1_1:-56283136 Msa0030200:intron
TGGGAATCTTCAGTGAATGC+TGG 0.615272 1_1:-56288629 Msa0030200:CDS
GCTTTCGTAATCCATGAGCA+CGG 0.616224 1_1:+56280394 None:intergenic
CAGGAAATAGAGTCTTTGAG+TGG 0.616721 1_1:-56278531 Msa0030200:CDS
AAATGACTCTGTTCATCATG+TGG 0.618126 1_1:-56293057 Msa0030200:CDS
AACAGGAAAGAGAAGCTGCA+AGG 0.618247 1_1:+56296247 None:intergenic
GATTGCTCGTGCTTGTGAGG+AGG 0.618365 1_1:-56293665 Msa0030200:CDS
TTCAAACTAGAATCAGGAGA+AGG 0.620739 1_1:-56282275 Msa0030200:CDS
TCGAAGGCAACTAGAAGTCA+CGG 0.621010 1_1:+56280689 None:intergenic
AAATGACACACTTTCCCTTG+AGG 0.622064 1_1:-56283543 Msa0030200:CDS
CTCATACTTGCACCAAAGTG+TGG 0.624114 1_1:-56283857 Msa0030200:CDS
GAAGGATCTTTCAGATCACA+AGG 0.624368 1_1:-56295019 Msa0030200:intron
CAGTAACAAAACATCAAGAA+GGG 0.625838 1_1:+56283730 None:intergenic
CTATCCAATTCTTTACTCTG+GGG 0.626014 1_1:+56295779 None:intergenic
AATGCATGTGTGTCGTGGTA+CGG 0.626211 1_1:+56295492 None:intergenic
AATGGACAGATCATCTATTG+TGG 0.627181 1_1:-56280156 Msa0030200:CDS
GAAATTCTCCAACTACGGGA+AGG 0.628693 1_1:-56286140 Msa0030200:intron
GATACATGAGCACAATGTTG+AGG 0.631551 1_1:-56295535 Msa0030200:CDS
ATGCCCAATTCCCTTGAGCA+AGG 0.631993 1_1:+56285924 None:intergenic
ACAACTCCAGAAACATTGAC+TGG 0.633006 1_1:+56282348 None:intergenic
TGTTTGCATCGGTCAAATGG+CGG 0.634876 1_1:-56278902 Msa0030200:CDS
AACATCATAGGTAGTCTCGA+AGG 0.636589 1_1:+56278502 None:intergenic
GTTCATCATCTTGGCGATGG+CGG 0.638833 1_1:-56279499 Msa0030200:CDS
TGTACAAATTGCAACTAGAG+AGG 0.639841 1_1:-56285085 Msa0030200:CDS
CTCAATATTGAGGAAACAGG+TGG 0.640604 1_1:+56282508 None:intergenic
TGTTGACACACTTCCAACGA+AGG 0.640723 1_1:-56293446 Msa0030200:CDS
ATGCTCTTGAAGTATATCGA+AGG 0.640746 1_1:+56281413 None:intergenic
TTGGGATGATCCTTCCTCAA+GGG 0.641835 1_1:+56283529 None:intergenic
AGATTCTTCTAAGCTTCTCG+AGG 0.641925 1_1:-56290870 Msa0030200:CDS
AACAGTATACAAGTATGACT+TGG 0.642247 1_1:-56282421 Msa0030200:CDS
GACTCTATTGATTATCCTGG+AGG 0.642367 1_1:-56283465 Msa0030200:CDS
TATTTCTAACAATGGCGGCA+GGG 0.643298 1_1:+56280253 None:intergenic
GCTGTCTAAGACAGATGATG+TGG 0.643610 1_1:-56282873 Msa0030200:CDS
TGGATTACGAAAGCTTCTTG+CGG 0.644128 1_1:-56280385 Msa0030200:CDS
CATGAATATACCTAGCGTGA+CGG 0.645722 1_1:-56278944 Msa0030200:CDS
TTAACGCCTAAAGGCAACAA+AGG 0.645984 1_1:-56280951 Msa0030200:CDS
GCTTAATAGTCAATTCTACA+CGG 0.647249 1_1:-56285489 Msa0030200:CDS
TGGTCATCCAACGAGGCAGG+TGG 0.648131 1_1:+56278967 None:intergenic
ATGATAGGACGAGCCCGGTG+TGG 0.649195 1_1:+56287024 None:intergenic
GGGTATATTTCTAACAATGG+CGG 0.649343 1_1:+56280248 None:intergenic
GTTGGGATGATCCTTCCTCA+AGG 0.651749 1_1:+56283528 None:intergenic
AAACGAAGAAGAAGAACACG+AGG 0.654037 1_1:-56296204 Msa0030200:five_prime_UTR
GGCACAGAAACACAAGTGCA+AGG 0.655067 1_1:+56285124 None:intergenic
TCACGCTAGGTATATTCATG+TGG 0.655802 1_1:+56278947 None:intergenic
ACGAAGGTGGAACTATTCGA+AGG 0.655938 1_1:+56280762 None:intergenic
AATGTGCTAAGAAGATGTGT+TGG 0.656297 1_1:-56290839 Msa0030200:CDS
TGCAAGGCTCTACATAAGCA+GGG 0.661597 1_1:+56285528 None:intergenic
CAAGTATGAGGTCAAGTATG+CGG 0.662111 1_1:+56283870 None:intergenic
TGTTGTGAGGAATATAACAA+TGG 0.663001 1_1:-56281444 Msa0030200:CDS
TGAAGACCAGAATTCACGAA+AGG 0.666347 1_1:+56295051 None:intergenic
TCTGTCTTAGACAGCCAACA+AGG 0.666621 1_1:+56282881 None:intergenic
GGGGTTGCAGGATAAAGCAA+AGG 0.670963 1_1:-56285468 Msa0030200:intron
AATCGATATTATCTTCATGG+TGG 0.671175 1_1:+56288938 None:intergenic
TGAAGTGTTAGACTTAAACT+CGG 0.673175 1_1:-56288482 Msa0030200:CDS
GACCGATGCAAACAACAAGT+AGG 0.679966 1_1:+56278911 None:intergenic
GCCCGGTGTGGACCCCAGTG+AGG 0.687104 1_1:+56287036 None:intergenic
TTAATAGTCAATTCTACACG+GGG 0.687408 1_1:-56285487 Msa0030200:CDS
GGAAATAGAGTCTTTGAGTG+GGG 0.687994 1_1:-56278529 Msa0030200:CDS
GATGAACAGAGTCATTTATG+GGG 0.694679 1_1:+56293063 None:intergenic
GAACAAATGCATGTGTGTCG+TGG 0.697055 1_1:+56295487 None:intergenic
GAAAATGATGAACTGCTGCA+CGG 0.698379 1_1:+56292646 None:intergenic
GAGCGATACTATAATAAACA+CGG 0.699526 1_1:-56285868 Msa0030200:CDS
TGATGTGGAGAAATTACTGA+AGG 0.704064 1_1:-56282858 Msa0030200:intron
ACTGTGCTGCTAAGAAATGG+AGG 0.705738 1_1:+56287957 None:intergenic
ATTCATGTGGTCATCCAACG+AGG 0.731331 1_1:+56278960 None:intergenic
CGTTGTTCACGTCCTCACTG+GGG 0.736218 1_1:-56287048 Msa0030200:CDS
ACAAGAACAGAAACAAGATG+GGG 0.736831 1_1:+56280537 None:intergenic
CATCCTCAAGCAGTTCAACG+AGG 0.737282 1_1:+56278592 None:intergenic
AAGAACTTTGATCAACGCAG+CGG 0.745827 1_1:+56280662 None:intergenic
GGGTCTTATTGACATCCCAG+AGG 0.763322 1_1:-56290972 Msa0030200:CDS
GTTTCGGAAAGACTTGACGG+CGG 0.791918 1_1:+56283506 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CTTATTATATAATATATTTG+GGG - chr1_1:56279591-56279610 Msa0030200:intron 10.0%
!! AATTAATACTAATATGTAAA+TGG + chr1_1:56279713-56279732 None:intergenic 10.0%
!! ATATACATATTAAAAACAAA+TGG + chr1_1:56281235-56281254 None:intergenic 10.0%
!! GAAAAAATATAATCAAAAAT+AGG + chr1_1:56282593-56282612 None:intergenic 10.0%
!! GAAAAAATATAATCAAAAAT+AGG + chr1_1:56282593-56282612 None:intergenic 10.0%
!!! TTCAATTTTTATAATTACTT+TGG - chr1_1:56284690-56284709 Msa0030200:intron 10.0%
!!! TCAATTTTTATAATTACTTT+GGG - chr1_1:56284691-56284710 Msa0030200:intron 10.0%
!!! AATTATACTTTTTTCATTTT+TGG - chr1_1:56287939-56287958 Msa0030200:CDS 10.0%
!!! TCATTTTAAAAATTAATAGT+TGG + chr1_1:56290471-56290490 None:intergenic 10.0%
!!! TTTCTTTTTATTTTTTTTCT+TGG - chr1_1:56292820-56292839 Msa0030200:intron 10.0%
!!! TATTTTTTAAATCTTTAGTT+AGG + chr1_1:56294101-56294120 None:intergenic 10.0%
!! TAAAGATTTAAAAAATATCA+TGG - chr1_1:56294104-56294123 Msa0030200:intron 10.0%
!!! TTATTAATATGACATTTTTT+TGG - chr1_1:56294974-56294993 Msa0030200:intron 10.0%
!!! CACTATTTATTTTAAAAATA+TGG - chr1_1:56295310-56295329 Msa0030200:CDS 10.0%
!! AGTTAACAATAAATAATTGA+AGG + chr1_1:56280003-56280022 None:intergenic 15.0%
!! ATAGAATAATAAGTTTAAAG+TGG + chr1_1:56280390-56280409 None:intergenic 15.0%
!!! CTTTTTAAACTATAAATTTG+AGG + chr1_1:56280619-56280638 None:intergenic 15.0%
!!! AATTTTTTCTGTTTGATTAA+TGG - chr1_1:56281014-56281033 Msa0030200:intron 15.0%
!! AAATTTAAAAAGATTGGAAA+TGG - chr1_1:56281650-56281669 Msa0030200:intron 15.0%
!!! TGATTATATTTTTTCCTAAA+AGG - chr1_1:56282598-56282617 Msa0030200:intron 15.0%
!!! TTTTTTTTTTACTGTCAAAA+TGG - chr1_1:56283037-56283056 Msa0030200:intron 15.0%
!! TTGATAAATAAAAATTTCAG+AGG + chr1_1:56284574-56284593 None:intergenic 15.0%
!! TAATCAATATATGACAAATT+TGG + chr1_1:56285236-56285255 None:intergenic 15.0%
!!! GTTCTATAATTAACATTTTA+TGG - chr1_1:56286899-56286918 Msa0030200:intron 15.0%
!! AAAAAATAATTAGGCATAAA+GGG + chr1_1:56287395-56287414 None:intergenic 15.0%
!! TAAAAAATAATTAGGCATAA+AGG + chr1_1:56287396-56287415 None:intergenic 15.0%
!! TATGAAGGTAAAAAATAATT+AGG + chr1_1:56287404-56287423 None:intergenic 15.0%
!!! TCAATATTTTACACATTATA+AGG + chr1_1:56287767-56287786 None:intergenic 15.0%
!!! TAAATTTGCATTGATTAATA+TGG + chr1_1:56287891-56287910 None:intergenic 15.0%
!! GCAAAAAAAAAAAAAAAAAG+TGG + chr1_1:56287966-56287985 None:intergenic 15.0%
!!! GATACATACTATTTTATTTT+TGG + chr1_1:56288077-56288096 None:intergenic 15.0%
!!! TGTTAATATGATTTTAATTG+TGG - chr1_1:56288492-56288511 Msa0030200:CDS 15.0%
!!! TAAGAAAGTATCTTATTTTT+GGG - chr1_1:56288597-56288616 Msa0030200:intron 15.0%
!! AAAAATTAATAAAAAGAAGC+AGG + chr1_1:56291249-56291268 None:intergenic 15.0%
!! TTACTTTGTTCAATTATATT+GGG - chr1_1:56292391-56292410 Msa0030200:intron 15.0%
!!! CTTAAACATTATTTTATTAC+AGG - chr1_1:56294291-56294310 Msa0030200:intron 15.0%
!! ATATATTGAAAATTTAGACA+TGG - chr1_1:56294941-56294960 Msa0030200:intron 15.0%
!! TATATTGAAAATTTAGACAT+GGG - chr1_1:56294942-56294961 Msa0030200:intron 15.0%
!!! GAAATTTGAATTTGAGTTTT+TGG - chr1_1:56278701-56278720 Msa0030200:CDS 20.0%
!!! TGATTTGATTTGTTTTTGTA+TGG - chr1_1:56278966-56278985 Msa0030200:CDS 20.0%
!! CAATTAATTTCATGATTCTA+CGG - chr1_1:56279833-56279852 Msa0030200:intron 20.0%
!! ATTATTCTATATCTATCATC+TGG - chr1_1:56280400-56280419 Msa0030200:CDS 20.0%
!! TATAGCCAAGTTAAAAAAAT+AGG + chr1_1:56281072-56281091 None:intergenic 20.0%
!!! TTATGAATCCTTTTTCTTAT+AGG - chr1_1:56281262-56281281 Msa0030200:intron 20.0%
!!! TATGAATCCTTTTTCTTATA+GGG - chr1_1:56281263-56281282 Msa0030200:intron 20.0%
!!! TAATTCTATGATTTTCTTTC+TGG - chr1_1:56281378-56281397 Msa0030200:CDS 20.0%
!! TGAGAGAAATTTAAAAAGAT+TGG - chr1_1:56281644-56281663 Msa0030200:intron 20.0%
!!! TAAGATTTTATGTAAGATGT+TGG - chr1_1:56282087-56282106 Msa0030200:intron 20.0%
!!! ATTCTTATTTGATATGTTGT+AGG - chr1_1:56282282-56282301 Msa0030200:CDS 20.0%
!!! TTTTTTTTTGTTGCTAAATG+CGG - chr1_1:56282498-56282517 Msa0030200:CDS 20.0%
!!! TTTTTTTTTTACTGTCAAAC+TGG - chr1_1:56282632-56282651 Msa0030200:intron 20.0%
!!! TTTTTCAAAACTTTGAACAA+AGG + chr1_1:56282853-56282872 None:intergenic 20.0%
!! TTTACAATAATCTCTAATCA+TGG - chr1_1:56282950-56282969 Msa0030200:intron 20.0%
!! TTACAATAATCTCTAATCAT+GGG - chr1_1:56282951-56282970 Msa0030200:intron 20.0%
!!! TGATTATATTTTTTCCGAAA+AGG - chr1_1:56283004-56283023 Msa0030200:intron 20.0%
!! AAAAACACAAATCACAATAT+TGG + chr1_1:56283340-56283359 None:intergenic 20.0%
!! ATGTAACATTTAAACAAAAG+AGG + chr1_1:56283820-56283839 None:intergenic 20.0%
!! AAATACAATATATGGGTTTA+AGG + chr1_1:56284194-56284213 None:intergenic 20.0%
!! AAATACAATATATGGGTTTA+AGG + chr1_1:56284194-56284213 None:intergenic 20.0%
!!! TTAACTGTAAAATCTAAGAT+GGG + chr1_1:56284387-56284406 None:intergenic 20.0%
!! ATTAACTGTAAAATCTAAGA+TGG + chr1_1:56284388-56284407 None:intergenic 20.0%
!! TAATAGTCAAAGAAATTAAC+TGG - chr1_1:56285089-56285108 Msa0030200:CDS 20.0%
!! AAAAACAAAACTTCAAAAAC+TGG - chr1_1:56285370-56285389 Msa0030200:intron 20.0%
!!! TTTATCTTCAATTAACTTGA+AGG - chr1_1:56285584-56285603 Msa0030200:intron 20.0%
!! TGTACTATTTGAGAAAAAAT+GGG + chr1_1:56285779-56285798 None:intergenic 20.0%
!! ATGTACTATTTGAGAAAAAA+TGG + chr1_1:56285780-56285799 None:intergenic 20.0%
!!! GGTCATATTTGTTTTAAAAA+CGG - chr1_1:56285826-56285845 Msa0030200:CDS 20.0%
!!! GTCATATTTGTTTTAAAAAC+GGG - chr1_1:56285827-56285846 Msa0030200:CDS 20.0%
!!! TCATATTTGTTTTAAAAACG+GGG - chr1_1:56285828-56285847 Msa0030200:CDS 20.0%
!!! ATAACCTTTTTTGTTTGTTT+TGG - chr1_1:56286051-56286070 Msa0030200:intron 20.0%
!! AATTCCAAAACAAACAAAAA+AGG + chr1_1:56286058-56286077 None:intergenic 20.0%
!! AATTGAATTCCAAACAAATA+CGG + chr1_1:56286262-56286281 None:intergenic 20.0%
!! AAAAAACTTAGATAATAGGT+GGG + chr1_1:56286654-56286673 None:intergenic 20.0%
!! TAAAAAACTTAGATAATAGG+TGG + chr1_1:56286655-56286674 None:intergenic 20.0%
!! CTGTAAAAAACTTAGATAAT+AGG + chr1_1:56286658-56286677 None:intergenic 20.0%
!!! AACAAATTCGCTATTATTTT+AGG + chr1_1:56288195-56288214 None:intergenic 20.0%
!!! AGTCTATAAGTATTGATAAA+GGG + chr1_1:56288299-56288318 None:intergenic 20.0%
!!! TAGTTTTGAACATAATTTTC+AGG - chr1_1:56288366-56288385 Msa0030200:CDS 20.0%
!! AAGATACTTTCTTACAATAT+TGG + chr1_1:56288591-56288610 None:intergenic 20.0%
!!! GTAAGAAAGTATCTTATTTT+TGG - chr1_1:56288596-56288615 Msa0030200:intron 20.0%
!! CAAGAAAAAATCAATAGTTT+AGG + chr1_1:56289277-56289296 None:intergenic 20.0%
!! CAAGAAAAAATCAATAGTTT+AGG + chr1_1:56289277-56289296 None:intergenic 20.0%
!!! AAACATTGAGATAATTTTGT+GGG + chr1_1:56289702-56289721 None:intergenic 20.0%
!!! AAAACATTGAGATAATTTTG+TGG + chr1_1:56289703-56289722 None:intergenic 20.0%
!!! TATCTCAATGTTTTTCTAAA+TGG - chr1_1:56289709-56289728 Msa0030200:CDS 20.0%
!! TTTAGAAACTATTTCAAAGT+AGG - chr1_1:56289898-56289917 Msa0030200:intron 20.0%
!! TTAGAAACTATTTCAAAGTA+GGG - chr1_1:56289899-56289918 Msa0030200:intron 20.0%
!!! AGAATCAATTTTAGTCTTTA+TGG - chr1_1:56289993-56290012 Msa0030200:intron 20.0%
!!! GATTATGTTAGTTTTCATTT+TGG - chr1_1:56290368-56290387 Msa0030200:intron 20.0%
!! AAATATAATACCAGAAAAAC+AGG + chr1_1:56290400-56290419 None:intergenic 20.0%
!! TTTAAAAATTAATAGTTGGC+AGG + chr1_1:56290467-56290486 None:intergenic 20.0%
!!! TTTCTTTTGAAAATCTATCT+TGG - chr1_1:56290508-56290527 Msa0030200:intron 20.0%
!!! TTCTTTTGAAAATCTATCTT+GGG - chr1_1:56290509-56290528 Msa0030200:intron 20.0%
!! AAGAATGAACTGATAATAAT+TGG - chr1_1:56290597-56290616 Msa0030200:intron 20.0%
!! TTGAATATGATTTACAGTTT+CGG + chr1_1:56291089-56291108 None:intergenic 20.0%
!!! TATTTTTTTTTTCTTCCTTC+AGG - chr1_1:56291822-56291841 Msa0030200:intron 20.0%
!! GAACAAAGTAAGAAATTAAA+AGG + chr1_1:56292382-56292401 None:intergenic 20.0%
!! CTTACTTTGTTCAATTATAT+TGG - chr1_1:56292390-56292409 Msa0030200:intron 20.0%
!!! TGAACCAAAAATATGAATTT+TGG - chr1_1:56292676-56292695 Msa0030200:CDS 20.0%
!!! TAAGCCAAAATTCATATTTT+TGG + chr1_1:56292683-56292702 None:intergenic 20.0%
!!! GAATAAGATTATGAATCTTT+TGG + chr1_1:56292963-56292982 None:intergenic 20.0%
!! TTATTCAAAATGTATGTGAT+GGG - chr1_1:56292977-56292996 Msa0030200:intron 20.0%
!! AAAATGCAATATATGTCTAA+GGG + chr1_1:56293369-56293388 None:intergenic 20.0%
!! ATCTTCTAATAATAGATTCA+AGG + chr1_1:56293846-56293865 None:intergenic 20.0%
!!! ACATTATTTTATTACAGGTA+CGG - chr1_1:56294296-56294315 Msa0030200:intron 20.0%
!! ACAAGGAATATAAAAACATT+AGG + chr1_1:56294719-56294738 None:intergenic 20.0%
!! TCAAATAACATTATCTAACA+AGG + chr1_1:56294736-56294755 None:intergenic 20.0%
!!! GTATTTTGTTTTTCATTCTT+AGG - chr1_1:56294836-56294855 Msa0030200:intron 20.0%
!!! TTTTAAAATAAATAGTGCAG+TGG + chr1_1:56295307-56295326 None:intergenic 20.0%
!! AAACAACATGAAACAAATAT+TGG + chr1_1:56295355-56295374 None:intergenic 20.0%
!! ACATATAAAGTAACTTTAGA+TGG + chr1_1:56295435-56295454 None:intergenic 20.0%
!! AACCTACAAAAGAAAATTTA+AGG + chr1_1:56295842-56295861 None:intergenic 20.0%
! ATAATTCCTAAACCTTTCAT+CGG + chr1_1:56278759-56278778 None:intergenic 25.0%
!!! TTCTGGATATTTTAATCTTC+CGG - chr1_1:56278886-56278905 Msa0030200:CDS 25.0%
!! TGATTATGTTTTGTGGTTTT+TGG - chr1_1:56278989-56279008 Msa0030200:CDS 25.0%
!!! TTTGATTTGTTATGTGTTTC+AGG - chr1_1:56279019-56279038 Msa0030200:intron 25.0%
! TAGTACAGATACTTAACATA+CGG - chr1_1:56279115-56279134 Msa0030200:intron 25.0%
!!! TGATTGTTTGTTACTTTCTT+TGG - chr1_1:56279149-56279168 Msa0030200:intron 25.0%
! ATGGTTTCTGATGTATTTAT+TGG - chr1_1:56279189-56279208 Msa0030200:intron 25.0%
!!! GTATTTATTGGTTTCTGTTA+AGG - chr1_1:56279201-56279220 Msa0030200:intron 25.0%
! ATCTTAAACATCTAAACACA+CGG + chr1_1:56279361-56279380 None:intergenic 25.0%
!!! ATCACTATGTTTTTTGTTAC+AGG - chr1_1:56279395-56279414 Msa0030200:CDS 25.0%
!!! TACATTCTTTGAAGGATTTT+TGG + chr1_1:56279430-56279449 None:intergenic 25.0%
! AATCCTTCAAAGAATGTAAT+TGG - chr1_1:56279432-56279451 Msa0030200:CDS 25.0%
!! AATATATTTGGGGTATCATT+TGG - chr1_1:56279601-56279620 Msa0030200:intron 25.0%
!!! CTTTTGTTTATTTGGTTACT+CGG - chr1_1:56279640-56279659 Msa0030200:intron 25.0%
!!! TTTTGTTTATTTGGTTACTC+GGG - chr1_1:56279641-56279660 Msa0030200:intron 25.0%
! AAAGGCAAATTCATTTCATA+TGG + chr1_1:56279671-56279690 None:intergenic 25.0%
! ACTTCTTAAAAGAAAGGTTT+AGG + chr1_1:56279754-56279773 None:intergenic 25.0%
! AATAGCACTTCTTAAAAGAA+AGG + chr1_1:56279760-56279779 None:intergenic 25.0%
!!! TTTTTTAAGTTATCAAACCC+CGG - chr1_1:56279868-56279887 Msa0030200:intron 25.0%
!!! ACATCTTTTTTTTTTTGTGG+TGG + chr1_1:56280193-56280212 None:intergenic 25.0%
!!! GTGACATCTTTTTTTTTTTG+TGG + chr1_1:56280196-56280215 None:intergenic 25.0%
! TCAATTTCAAATATGGAGAA+TGG + chr1_1:56280218-56280237 None:intergenic 25.0%
!! ATTCTCCATATTTGAAATTG+AGG - chr1_1:56280217-56280236 Msa0030200:CDS 25.0%
! TTAAATACGTGTTCAGTTAT+AGG - chr1_1:56280519-56280538 Msa0030200:CDS 25.0%
! TAAATACGTGTTCAGTTATA+GGG - chr1_1:56280520-56280539 Msa0030200:CDS 25.0%
! GTATTCTTCATTATTCATTC+AGG - chr1_1:56280651-56280670 Msa0030200:CDS 25.0%
! AAGATTGATTAAGGCAATAA+GGG + chr1_1:56280964-56280983 None:intergenic 25.0%
!!! TCATGCCTATTTTTTTAACT+TGG - chr1_1:56281064-56281083 Msa0030200:intron 25.0%
!!! TAGTTTCTTTAAAACATCCA+AGG + chr1_1:56281156-56281175 None:intergenic 25.0%
!!! TGGATGTTTTAAAGAAACTA+AGG - chr1_1:56281156-56281175 Msa0030200:intron 25.0%
!!! GGTTTTATTAGAATTGTCTA+AGG - chr1_1:56281296-56281315 Msa0030200:intron 25.0%
! ATTGCATTAACTATATGGTT+TGG + chr1_1:56281776-56281795 None:intergenic 25.0%
! CAACTATTGCATTAACTATA+TGG + chr1_1:56281781-56281800 None:intergenic 25.0%
! GAATGAAAAAAAAAGTTGTG+AGG + chr1_1:56281842-56281861 None:intergenic 25.0%
!! ATTTTATGTAAGATGTTGGA+TGG - chr1_1:56282091-56282110 Msa0030200:intron 25.0%
! TACGTACTAACAGAAAATAA+AGG + chr1_1:56282254-56282273 None:intergenic 25.0%
! ACTGCTTGATATAAATTCTT+CGG - chr1_1:56282324-56282343 Msa0030200:CDS 25.0%
! AAAAAAAAAAATCAGCCCAT+AGG + chr1_1:56282487-56282506 None:intergenic 25.0%
!! TTGTAAAGTATCTTCAACAT+AGG + chr1_1:56282531-56282550 None:intergenic 25.0%
! TTTACAATAATCTCTGATCA+TGG - chr1_1:56282544-56282563 Msa0030200:CDS 25.0%
! TTACAATAATCTCTGATCAT+GGG - chr1_1:56282545-56282564 Msa0030200:CDS 25.0%
! TCAGTTCAAATCATTTGAAA+TGG + chr1_1:56282692-56282711 None:intergenic 25.0%
!! TTTTGATAGAAGACTTGATT+TGG - chr1_1:56282798-56282817 Msa0030200:intron 25.0%
!! TAAAGTATCTTCAACAATGT+TGG + chr1_1:56282934-56282953 None:intergenic 25.0%
! TACAATAATCTCTAATCATG+GGG - chr1_1:56282952-56282971 Msa0030200:intron 25.0%
! TCAGTTCAAATCATTTGAAA+TGG + chr1_1:56282692-56282711 None:intergenic 25.0%
! TTAAAACATGGAATAGGAAT+CGG + chr1_1:56283534-56283553 None:intergenic 25.0%
! GTTATGTTCCAAAATGAATA+TGG - chr1_1:56283862-56283881 Msa0030200:CDS 25.0%
!!! GGGAATATGTTTATTTTTCT+CGG - chr1_1:56283978-56283997 Msa0030200:intron 25.0%
!!! TTCCTGTTATTTTTGATGAA+TGG - chr1_1:56284115-56284134 Msa0030200:intron 25.0%
! CTCAGCAAAATACAATATAT+GGG + chr1_1:56284201-56284220 None:intergenic 25.0%
! TCTCAGCAAAATACAATATA+TGG + chr1_1:56284202-56284221 None:intergenic 25.0%
!! ATTCACGATAAATCTAAGAT+GGG + chr1_1:56284276-56284295 None:intergenic 25.0%
! TATTCACGATAAATCTAAGA+TGG + chr1_1:56284277-56284296 None:intergenic 25.0%
! CTCAGCAAAATACAATATAT+GGG + chr1_1:56284201-56284220 None:intergenic 25.0%
! TCTCAGCAAAATACAATATA+TGG + chr1_1:56284202-56284221 None:intergenic 25.0%
! TTACAGTTAATTACAAAGAG+AGG - chr1_1:56284397-56284416 Msa0030200:intron 25.0%
!! TTTTTCTTCCATTCTAATGA+AGG + chr1_1:56284428-56284447 None:intergenic 25.0%
! ATTGTTTAGTAACTTCCTTT+GGG + chr1_1:56284612-56284631 None:intergenic 25.0%
! AATTGTTTAGTAACTTCCTT+TGG + chr1_1:56284613-56284632 None:intergenic 25.0%
! AACAATTGACATGTAACATT+AGG - chr1_1:56284626-56284645 Msa0030200:intron 25.0%
!!! CTAAATCAAATTCTAAGATG+AGG + chr1_1:56284724-56284743 None:intergenic 25.0%
!! CTCATCTTAGAATTTGATTT+AGG - chr1_1:56284722-56284741 Msa0030200:intron 25.0%
! ATTTAGGCCTAAATATATAC+TGG - chr1_1:56284738-56284757 Msa0030200:intron 25.0%
! TTTAGGCCTAAATATATACT+GGG - chr1_1:56284739-56284758 Msa0030200:intron 25.0%
!! ATTTTCAAATTCTCTTATGC+AGG - chr1_1:56284789-56284808 Msa0030200:intron 25.0%
! TGATAATATTGCTGAAGAAA+CGG - chr1_1:56285120-56285139 Msa0030200:CDS 25.0%
! TCAAATTGATGAGATAGTAT+CGG - chr1_1:56285303-56285322 Msa0030200:intron 25.0%
!!! TTTGTTTTTTCAAAGTCTAC+TGG + chr1_1:56285359-56285378 None:intergenic 25.0%
! ATTAACAATTTAGAAGTTCG+TGG + chr1_1:56285493-56285512 None:intergenic 25.0%
! AATTGAAATGTAATGATGAC+TGG + chr1_1:56285521-56285540 None:intergenic 25.0%
! TTAATTGAAGATAAACATCC+AGG + chr1_1:56285579-56285598 None:intergenic 25.0%
! CTTGAAGGTTATCAAAAAAT+TGG - chr1_1:56285599-56285618 Msa0030200:intron 25.0%
!!! TGACTTTCTATTTTGATCAA+AGG - chr1_1:56285869-56285888 Msa0030200:CDS 25.0%
!! TTTCTTATTTCTTCACTTTC+TGG - chr1_1:56286022-56286041 Msa0030200:intron 25.0%
! ATGTACTCCATATCTTAAAT+GGG - chr1_1:56286712-56286731 Msa0030200:intron 25.0%
! ATATACAGTTCCTTTGTAAA+TGG - chr1_1:56286780-56286799 Msa0030200:intron 25.0%
!! TTTTTGAATTTTTCCTGTGT+AGG - chr1_1:56286953-56286972 Msa0030200:intron 25.0%
!! TATGCTACTTAATCATATGA+TGG - chr1_1:56287197-56287216 Msa0030200:intron 25.0%
! AGGTAATAGGATATTATGAT+AGG + chr1_1:56287570-56287589 None:intergenic 25.0%
!! ATATACCTGTTTTGCATATT+TGG + chr1_1:56287593-56287612 None:intergenic 25.0%
!!! ATAAGTTTTAACATGCAAGT+GGG + chr1_1:56288133-56288152 None:intergenic 25.0%
!!! AATAAGTTTTAACATGCAAG+TGG + chr1_1:56288134-56288153 None:intergenic 25.0%
! TTGCATGTTAAAACTTATTG+TGG - chr1_1:56288135-56288154 Msa0030200:intron 25.0%
!!! AATAATAGCGAATTTGTTGA+AGG - chr1_1:56288197-56288216 Msa0030200:intron 25.0%
!!! ATAATAGCGAATTTGTTGAA+GGG - chr1_1:56288198-56288217 Msa0030200:intron 25.0%
!!! ATAAAGGGGATACATTTTTT+TGG + chr1_1:56288284-56288303 None:intergenic 25.0%
!!! GTCTATAAGTATTGATAAAG+GGG + chr1_1:56288298-56288317 None:intergenic 25.0%
!!! GAGTCTATAAGTATTGATAA+AGG + chr1_1:56288300-56288319 None:intergenic 25.0%
! ATTATGTTCAAAACTAAAGC+AGG + chr1_1:56288362-56288381 None:intergenic 25.0%
!! AGAAATACTTGAGTTCATTT+TGG - chr1_1:56288403-56288422 Msa0030200:CDS 25.0%
!! GAAATACTTGAGTTCATTTT+GGG - chr1_1:56288404-56288423 Msa0030200:CDS 25.0%
! ATCAATGCTGTCTAATTTAA+TGG - chr1_1:56288686-56288705 Msa0030200:CDS 25.0%
! TTTCAGTGTTTGAAAATTTC+TGG + chr1_1:56288743-56288762 None:intergenic 25.0%
!! AATTTTCAAACACTGAAACT+AGG - chr1_1:56288745-56288764 Msa0030200:intron 25.0%
!! TCAGATCTAAGACATAATAT+TGG + chr1_1:56288803-56288822 None:intergenic 25.0%
! AAATTCAAACTAACAAGCAA+GGG + chr1_1:56288978-56288997 None:intergenic 25.0%
! TAAATTCAAACTAACAAGCA+AGG + chr1_1:56288979-56288998 None:intergenic 25.0%
! TAGTTTGAATTTACTAACCT+TGG - chr1_1:56288986-56289005 Msa0030200:CDS 25.0%
!!! TTGATTTTTTCTTGTATGTC+AGG - chr1_1:56289283-56289302 Msa0030200:intron 25.0%
! ATCATAATTCAATAGCATTG+TGG + chr1_1:56289340-56289359 None:intergenic 25.0%
! TTAATTGAGAAAAGACATGT+TGG + chr1_1:56289564-56289583 None:intergenic 25.0%
!! AACATGTCTTTTCTCAATTA+AGG - chr1_1:56289563-56289582 Msa0030200:intron 25.0%
! TTAACTACTATAGAAAAGTG+CGG - chr1_1:56289674-56289693 Msa0030200:CDS 25.0%
!!! AATATAGTTTTAAGCAAACG+AGG + chr1_1:56289736-56289755 None:intergenic 25.0%
! ATGCTTAATCTACAAAATGA+AGG + chr1_1:56289879-56289898 None:intergenic 25.0%
!! GACTAAAATTGATTCTTTCT+GGG + chr1_1:56289989-56290008 None:intergenic 25.0%
!! AGACTAAAATTGATTCTTTC+TGG + chr1_1:56289990-56290009 None:intergenic 25.0%
! AACTATACATCATGAGAAAT+TGG - chr1_1:56290315-56290334 Msa0030200:intron 25.0%
! ATGAAAACTAACATAATCCA+AGG + chr1_1:56290366-56290385 None:intergenic 25.0%
!! TATCAGTTCATTCTTTGAAA+TGG + chr1_1:56290592-56290611 None:intergenic 25.0%
! AATGAACTAAGGATAATTGT+TGG - chr1_1:56290647-56290666 Msa0030200:intron 25.0%
!!! AAGGATAATTGTTGGTTTAA+TGG - chr1_1:56290655-56290674 Msa0030200:intron 25.0%
! CGCTAAGAAGTTTAAATAAA+GGG + chr1_1:56290991-56291010 None:intergenic 25.0%
! TCGCTAAGAAGTTTAAATAA+AGG + chr1_1:56290992-56291011 None:intergenic 25.0%
! ATTGATATTCTTCCAGTTAT+TGG - chr1_1:56291420-56291439 Msa0030200:intron 25.0%
! AAGTAAAAGTTTACGTAAGT+TGG + chr1_1:56291553-56291572 None:intergenic 25.0%
!!! GTTTTCAAGACAATACTTTT+GGG - chr1_1:56291744-56291763 Msa0030200:intron 25.0%
! ATATATCTATGAAAACCTGA+AGG + chr1_1:56291840-56291859 None:intergenic 25.0%
!!! CAATTGTTTTATATCTCCTA+CGG - chr1_1:56291890-56291909 Msa0030200:intron 25.0%
! AGATGCAGATCATAAAAAAA+TGG + chr1_1:56291952-56291971 None:intergenic 25.0%
! GAACAACAATATAAGTAATG+AGG + chr1_1:56292026-56292045 None:intergenic 25.0%
!! TAACATTTTGTACTATAGAG+TGG - chr1_1:56292104-56292123 Msa0030200:intron 25.0%
!! AACATTTTGTACTATAGAGT+GGG - chr1_1:56292105-56292124 Msa0030200:intron 25.0%
! TCATAAAAGGAAACTAAAGA+AGG + chr1_1:56292184-56292203 None:intergenic 25.0%
!!! ATATAGTTGATGAAATGTGA+TGG - chr1_1:56292532-56292551 Msa0030200:CDS 25.0%
! TAAGCAAAACTTTGTTCTTT+AGG - chr1_1:56292594-56292613 Msa0030200:intron 25.0%
! CATTCAATAAATGTTGTATG+CGG - chr1_1:56292619-56292638 Msa0030200:intron 25.0%
!! AAGATTATGAATCTTTTGGT+TGG + chr1_1:56292959-56292978 None:intergenic 25.0%
! CTTATTCAAAATGTATGTGA+TGG - chr1_1:56292976-56292995 Msa0030200:intron 25.0%
! TATTCAAAATGTATGTGATG+GGG - chr1_1:56292978-56292997 Msa0030200:intron 25.0%
!!! CAATATTTTGAGATAATACG+TGG - chr1_1:56293283-56293302 Msa0030200:CDS 25.0%
! GAAAATGCAATATATGTCTA+AGG + chr1_1:56293370-56293389 None:intergenic 25.0%
! CATTGGATCTACTATATATA+GGG - chr1_1:56293442-56293461 Msa0030200:CDS 25.0%
! TTTGTCATAAATACACATCT+TGG - chr1_1:56293484-56293503 Msa0030200:intron 25.0%
! TGGTAAACAAATTAAGAGTT+TGG - chr1_1:56293504-56293523 Msa0030200:intron 25.0%
!! TTGCTAAAAGTATGTATTGT+TGG - chr1_1:56294232-56294251 Msa0030200:intron 25.0%
!! TAAAAGTATGTATTGTTGGA+TGG - chr1_1:56294236-56294255 Msa0030200:intron 25.0%
! AACAATTGTGTTTGATATGT+TGG - chr1_1:56294381-56294400 Msa0030200:intron 25.0%
!!! AAGGATTTTTGACTTTTGTT+TGG - chr1_1:56294453-56294472 Msa0030200:intron 25.0%
!!! AGTTCAAAACATTGATTTAG+TGG - chr1_1:56294507-56294526 Msa0030200:intron 25.0%
! TCAATACTCCTTATAAAAAG+AGG + chr1_1:56294595-56294614 None:intergenic 25.0%
!!! TTTTTATAAGGAGTATTGAG+TGG - chr1_1:56294596-56294615 Msa0030200:intron 25.0%
!!! TTTTATAAGGAGTATTGAGT+GGG - chr1_1:56294597-56294616 Msa0030200:intron 25.0%
! CATATTTATGTCAATTCTTG+TGG - chr1_1:56294892-56294911 Msa0030200:intron 25.0%
!! CATATCCTTTTCATATTTCT+AGG - chr1_1:56295012-56295031 Msa0030200:intron 25.0%
! AATGACCTAGAAATATGAAA+AGG + chr1_1:56295020-56295039 None:intergenic 25.0%
!! AAAAAGAAGGCTAAGATTTT+GGG - chr1_1:56295131-56295150 Msa0030200:CDS 25.0%
! TAAAGTAACTTTAGATGGAA+TGG + chr1_1:56295430-56295449 None:intergenic 25.0%
! ATATCACAAATTATACTTCG+CGG + chr1_1:56295737-56295756 None:intergenic 25.0%
! TTACTCAAAATAGGAGAAAA+AGG + chr1_1:56295763-56295782 None:intergenic 25.0%
!! ACTTAAGTGTTACTCAAAAT+AGG + chr1_1:56295772-56295791 None:intergenic 25.0%
!! TGCCTTAAATTTTCTTTTGT+AGG - chr1_1:56295837-56295856 Msa0030200:CDS 25.0%
! CTAGAATTGTGTAATCATAT+AGG - chr1_1:56296109-56296128 Msa0030200:CDS 25.0%
! AACATATTATGGCCATTTAA+AGG - chr1_1:56296154-56296173 Msa0030200:five_prime_UTR 25.0%
! ATCTCTGATTCCATTTAAAA+AGG + chr1_1:56296291-56296310 None:intergenic 25.0%
AAGGAAGAATTGAGAAGTTA+GGG + chr1_1:56278412-56278431 None:intergenic 30.0%
TCTATCCAATTCTTTACTCT+GGG + chr1_1:56278801-56278820 None:intergenic 30.0%
AGAGTAAAGAATTGGATAGA+GGG - chr1_1:56278801-56278820 Msa0030200:intron 30.0%
! CTGTATTTGAAACTACTTTC+TGG - chr1_1:56278869-56278888 Msa0030200:CDS 30.0%
! TGTATGGTGATTATGTTTTG+TGG - chr1_1:56278982-56279001 Msa0030200:CDS 30.0%
!! TATTGGTTTCTGTTAAGGAA+TGG - chr1_1:56279206-56279225 Msa0030200:intron 30.0%
TTCTGTTAAGGAATGGTATA+TGG - chr1_1:56279213-56279232 Msa0030200:intron 30.0%
TCTGTTAAGGAATGGTATAT+GGG - chr1_1:56279214-56279233 Msa0030200:intron 30.0%
TCTTAAACATCTAAACACAC+GGG + chr1_1:56279360-56279379 None:intergenic 30.0%
!! TTCTTTGAAGGATTTTTGGA+TGG + chr1_1:56279426-56279445 None:intergenic 30.0%
AAGCCAATTACATTCTTTGA+AGG + chr1_1:56279438-56279457 None:intergenic 30.0%
ATATATCCTTTCGTGAATTC+TGG - chr1_1:56279519-56279538 Msa0030200:CDS 30.0%
CGAGTAACCAAATAAACAAA+AGG + chr1_1:56279642-56279661 None:intergenic 30.0%
TAATTCTCTTGTAGCTAAGT+TGG - chr1_1:56279728-56279747 Msa0030200:intron 30.0%
!!! CTTTTAAGAAGTGCTATTCA+CGG - chr1_1:56279762-56279781 Msa0030200:intron 30.0%
TGATTCTACGGTTGATTATA+TGG - chr1_1:56279845-56279864 Msa0030200:intron 30.0%
! TTGTTTGATATTGCTATTCC+GGG + chr1_1:56279889-56279908 None:intergenic 30.0%
! CTTGTTTGATATTGCTATTC+CGG + chr1_1:56279890-56279909 None:intergenic 30.0%
!! TCTGTACAATTTTGCTATGA+AGG - chr1_1:56279972-56279991 Msa0030200:CDS 30.0%
GACAATGCATTATATATGCA+AGG - chr1_1:56280112-56280131 Msa0030200:CDS 30.0%
TTCCTCCTCAATTTCAAATA+TGG + chr1_1:56280225-56280244 None:intergenic 30.0%
TTCTCAAACACACATGTTTA+AGG - chr1_1:56280300-56280319 Msa0030200:intron 30.0%
ATGTTCTTTGGTCTATTTGA+CGG + chr1_1:56280354-56280373 None:intergenic 30.0%
!!! ATATCTATCATCTGGCTTTT+TGG - chr1_1:56280408-56280427 Msa0030200:CDS 30.0%
AAGGTCTATGTTAGTAAACT+TGG - chr1_1:56280463-56280482 Msa0030200:CDS 30.0%
! TAAACTATAAATTTGAGGCC+AGG + chr1_1:56280614-56280633 None:intergenic 30.0%
ACAGAATCTAAGAACAAGAT+TGG + chr1_1:56280681-56280700 None:intergenic 30.0%
ATCAAACCATTCAAAAGTGA+TGG + chr1_1:56280876-56280895 None:intergenic 30.0%
!! CTAAAGATCTTCATTGGTTT+CGG - chr1_1:56280934-56280953 Msa0030200:CDS 30.0%
CAAGATTGATTAAGGCAATA+AGG + chr1_1:56280965-56280984 None:intergenic 30.0%
TGACAGAACAAGAAGAAAAT+AGG + chr1_1:56281047-56281066 None:intergenic 30.0%
AAAGTTTCTCATTGTTCTGT+TGG - chr1_1:56281332-56281351 Msa0030200:intron 30.0%
TTATCACCTGCAGATAATTA+GGG + chr1_1:56281361-56281380 None:intergenic 30.0%
ATTATCACCTGCAGATAATT+AGG + chr1_1:56281362-56281381 None:intergenic 30.0%
TATGATCATTTGCAGTTCTA+AGG - chr1_1:56281447-56281466 Msa0030200:CDS 30.0%
TGATGAACAGAGTCATTTAT+GGG + chr1_1:56281517-56281536 None:intergenic 30.0%
ATGATGAACAGAGTCATTTA+TGG + chr1_1:56281518-56281537 None:intergenic 30.0%
!! ATAGTTTCACACAAGTTGAT+AGG + chr1_1:56281555-56281574 None:intergenic 30.0%
GTGAAACTATCAGAAAAAGT+TGG - chr1_1:56281565-56281584 Msa0030200:CDS 30.0%
TCATTCAAATGTCAATTAGC+TGG - chr1_1:56281856-56281875 Msa0030200:intron 30.0%
ATATCTCGATGTCAAAAGTT+TGG - chr1_1:56282134-56282153 Msa0030200:intron 30.0%
CTGCTTGATATAAATTCTTC+GGG - chr1_1:56282325-56282344 Msa0030200:CDS 30.0%
! CAGTATAAACGTACAGTTTT+GGG + chr1_1:56282414-56282433 None:intergenic 30.0%
! TCAGTATAAACGTACAGTTT+TGG + chr1_1:56282415-56282434 None:intergenic 30.0%
TACAATAATCTCTGATCATG+GGG - chr1_1:56282546-56282565 Msa0030200:CDS 30.0%
! AAAATGTGAAGCAACCTTTT+AGG + chr1_1:56282615-56282634 None:intergenic 30.0%
TGAAATGGAACTCAACATAT+AGG + chr1_1:56282677-56282696 None:intergenic 30.0%
! AAAATGTGAAGCAACCTTTT+CGG + chr1_1:56282615-56282634 None:intergenic 30.0%
TGAAATGGAACTCAACATAT+AGG + chr1_1:56282677-56282696 None:intergenic 30.0%
TGATAGAAGACTTGATTATG+TGG - chr1_1:56283206-56283225 Msa0030200:CDS 30.0%
ATTATGTGGTGTACAAAGTA+GGG - chr1_1:56283220-56283239 Msa0030200:CDS 30.0%
ATGGGGTAATCTTCATAAAT+TGG - chr1_1:56283394-56283413 Msa0030200:intron 30.0%
TCGGTTATGCACAATAATAA+TGG + chr1_1:56283515-56283534 None:intergenic 30.0%
AACGGTATAGTTAAATGGTT+GGG + chr1_1:56283560-56283579 None:intergenic 30.0%
!! ACAAAACATTTTGGGTAGAA+CGG + chr1_1:56283578-56283597 None:intergenic 30.0%
! CCTGATCAACAAAACATTTT+GGG + chr1_1:56283586-56283605 None:intergenic 30.0%
!! CCAAAATGTTTTGTTGATCA+GGG - chr1_1:56283584-56283603 Msa0030200:CDS 30.0%
ATCATCAAACTGTCTCAATA+TGG + chr1_1:56283630-56283649 None:intergenic 30.0%
TTGGAACATAACATGTATGT+TGG + chr1_1:56283854-56283873 None:intergenic 30.0%
AGCCATTCATCAAAAATAAC+AGG + chr1_1:56284120-56284139 None:intergenic 30.0%
!!! TGTTATTTTTGATGAATGGC+TGG - chr1_1:56284119-56284138 Msa0030200:intron 30.0%
! TAGTACCAAATTGATGACTA+TGG - chr1_1:56284238-56284257 Msa0030200:intron 30.0%
TAACACCATAGTCATCAATT+TGG + chr1_1:56284246-56284265 None:intergenic 30.0%
! TAGTACCAAATTGATGACTA+TGG - chr1_1:56284238-56284257 Msa0030200:intron 30.0%
TAACACCATAGTCATCAATT+TGG + chr1_1:56284246-56284265 None:intergenic 30.0%
GCTGAGAAATAAATGATTGT+TGG - chr1_1:56284513-56284532 Msa0030200:intron 30.0%
AATAAATGATTGTTGGACCA+AGG - chr1_1:56284520-56284539 Msa0030200:intron 30.0%
!! AAGGAGTAATGGATAAATCA+TGG + chr1_1:56284913-56284932 None:intergenic 30.0%
! AAATCTTTCTTTTCAACCTG+TGG + chr1_1:56284942-56284961 None:intergenic 30.0%
TTCAGATTTATGCTTTGTCT+TGG - chr1_1:56285003-56285022 Msa0030200:intron 30.0%
GGACTTAAATTTAAAAGCTC+TGG - chr1_1:56285066-56285085 Msa0030200:intron 30.0%
! ACTTTTTGAACAACAGACAT+TGG + chr1_1:56285275-56285294 None:intergenic 30.0%
! GACTGATTCTATATTCATCT+CGG + chr1_1:56285329-56285348 None:intergenic 30.0%
AGTCAAACTTATAGTATGTC+AGG + chr1_1:56285412-56285431 None:intergenic 30.0%
CATACTATAAGTTTGACTGT+AGG - chr1_1:56285414-56285433 Msa0030200:intron 30.0%
TATAAGTTTGACTGTAGGAA+TGG - chr1_1:56285419-56285438 Msa0030200:intron 30.0%
AAGGTTATCAAAAAATTGGC+TGG - chr1_1:56285603-56285622 Msa0030200:intron 30.0%
AATCGATATTATCTTCATGG+TGG + chr1_1:56285641-56285660 None:intergenic 30.0%
ACCATGAAGATAATATCGAT+TGG - chr1_1:56285640-56285659 Msa0030200:intron 30.0%
ACCAATCGATATTATCTTCA+TGG + chr1_1:56285644-56285663 None:intergenic 30.0%
! GACAAAGAAAACAAACCTTT+TGG + chr1_1:56285747-56285766 None:intergenic 30.0%
TACATAACGACACAAACAAA+TGG - chr1_1:56285795-56285814 Msa0030200:intron 30.0%
!! CACAAACAAATGGATTAGTT+AGG - chr1_1:56285805-56285824 Msa0030200:intron 30.0%
! TGAAGTGTTAGACTTAAACT+CGG - chr1_1:56286094-56286113 Msa0030200:intron 30.0%
ACCTCTAAATGCAAAAGTTA+TGG - chr1_1:56286160-56286179 Msa0030200:CDS 30.0%
!! AAGTTATGGCTTGCATATTT+TGG - chr1_1:56286174-56286193 Msa0030200:CDS 30.0%
TAATTCCTTCCGTATTTGTT+TGG - chr1_1:56286250-56286269 Msa0030200:intron 30.0%
! GGAATTCAATTTTGTCTTAG+TGG - chr1_1:56286271-56286290 Msa0030200:intron 30.0%
CAACATTTGAAGAACATAAG+AGG + chr1_1:56286465-56286484 None:intergenic 30.0%
! TTTTTCGCTTTGTCAAAGTT+CGG - chr1_1:56286578-56286597 Msa0030200:intron 30.0%
!!! TCTAAGTTTTTTACAGACGA+AGG - chr1_1:56286662-56286681 Msa0030200:intron 30.0%
GATGTACTCCATATCTTAAA+TGG - chr1_1:56286711-56286730 Msa0030200:intron 30.0%
!!! TTATGTTGCTCTTATTTTCC+AGG - chr1_1:56286870-56286889 Msa0030200:intron 30.0%
TAATTATAGAACATGTCACC+TGG + chr1_1:56286891-56286910 None:intergenic 30.0%
! TGGATGTCAAACTGATATTT+TGG - chr1_1:56287042-56287061 Msa0030200:CDS 30.0%
TATATATGGTTGTGGACAAA+TGG - chr1_1:56287154-56287173 Msa0030200:intron 30.0%
!! TCTTGATTTTTGAGGAAATC+TGG - chr1_1:56287226-56287245 Msa0030200:intron 30.0%
AAATTCTTTGCAGTCTGTAA+GGG - chr1_1:56287279-56287298 Msa0030200:CDS 30.0%
TAACTTAACAATACACTCCA+TGG + chr1_1:56287311-56287330 None:intergenic 30.0%
TTTGCATATTTGGAGGTAAT+AGG + chr1_1:56287583-56287602 None:intergenic 30.0%
ATAGTTGTGTTGTGATAAAG+TGG + chr1_1:56287648-56287667 None:intergenic 30.0%
AGATCTTTCAAATGTGTAGA+GGG - chr1_1:56287713-56287732 Msa0030200:intron 30.0%
! CTCAAATACTTTAAAAAGCC+AGG + chr1_1:56287804-56287823 None:intergenic 30.0%
! TTGCTAAGAAAGTACAGATT+AGG - chr1_1:56287837-56287856 Msa0030200:intron 30.0%
! TGCTAAGAAAGTACAGATTA+GGG - chr1_1:56287838-56287857 Msa0030200:intron 30.0%
AAAGTACAGATTAGGGTTTA+GGG - chr1_1:56287845-56287864 Msa0030200:intron 30.0%
AGGGTAATTTCCTAAAGTAA+TGG - chr1_1:56288217-56288236 Msa0030200:intron 30.0%
CAACAAAATGCCATTACTTT+AGG + chr1_1:56288230-56288249 None:intergenic 30.0%
! AAGTAATGGCATTTTGTTGA+AGG - chr1_1:56288231-56288250 Msa0030200:intron 30.0%
! AGTAATGGCATTTTGTTGAA+GGG - chr1_1:56288232-56288251 Msa0030200:intron 30.0%
!!! AGTTCATTTTGGGTTATACT+GGG - chr1_1:56288414-56288433 Msa0030200:CDS 30.0%
ACACACTAAGCTATTAAATC+TGG + chr1_1:56288552-56288571 None:intergenic 30.0%
AGATTTAATAGCTTAGTGTG+TGG - chr1_1:56288551-56288570 Msa0030200:intron 30.0%
GATTTAATAGCTTAGTGTGT+GGG - chr1_1:56288552-56288571 Msa0030200:intron 30.0%
!!! TTTTTGGGCATTGATTTCTA+TGG - chr1_1:56288612-56288631 Msa0030200:CDS 30.0%
!!! TTTTGGGCATTGATTTCTAT+GGG - chr1_1:56288613-56288632 Msa0030200:CDS 30.0%
!!! GACAGCATTGATGATATTTT+AGG + chr1_1:56288678-56288697 None:intergenic 30.0%
GAGCGATACTATAATAAACA+CGG - chr1_1:56288708-56288727 Msa0030200:intron 30.0%
GCTTAATAGTCAATTCTACA+CGG - chr1_1:56289087-56289106 Msa0030200:intron 30.0%
CTTAATAGTCAATTCTACAC+GGG - chr1_1:56289088-56289107 Msa0030200:intron 30.0%
TTAATAGTCAATTCTACACG+GGG - chr1_1:56289089-56289108 Msa0030200:intron 30.0%
!!! TTGATTTTTTCTTGCATGTC+AGG - chr1_1:56289419-56289438 Msa0030200:intron 30.0%
! AAATGTGAGTTTCTTGCTTT+TGG - chr1_1:56289527-56289546 Msa0030200:intron 30.0%
!! CTTTTGTTTGTTTTCCTCTT+CGG - chr1_1:56289588-56289607 Msa0030200:intron 30.0%
CCACTAAAGAAATACAAAAC+AGG + chr1_1:56289616-56289635 None:intergenic 30.0%
! CCTGTTTTGTATTTCTTTAG+TGG - chr1_1:56289613-56289632 Msa0030200:intron 30.0%
!!! TCTGCAATTGGCTTATTTTA+GGG + chr1_1:56289788-56289807 None:intergenic 30.0%
ACTAGAAAAGGAAATTGATC+AGG + chr1_1:56290025-56290044 None:intergenic 30.0%
TCTGACAAATCAATTGACTA+TGG - chr1_1:56290153-56290172 Msa0030200:intron 30.0%
! TTCCAAATATGTTTTCGTAG+AGG - chr1_1:56290187-56290206 Msa0030200:intron 30.0%
TTCCTCTACGAAAACATATT+TGG + chr1_1:56290192-56290211 None:intergenic 30.0%
CATGAAATGTGAAAATATGC+CGG - chr1_1:56290257-56290276 Msa0030200:intron 30.0%
ATGAAATGTGAAAATATGCC+GGG - chr1_1:56290258-56290277 Msa0030200:intron 30.0%
! CCTTAGTTCATTCTTTGAAA+TGG + chr1_1:56290639-56290658 None:intergenic 30.0%
CCATTTCAAAGAATGAACTA+AGG - chr1_1:56290636-56290655 Msa0030200:intron 30.0%
CAGATAGATTTCAAAACTGT+TGG - chr1_1:56290683-56290702 Msa0030200:intron 30.0%
CATATGCAGAATAGATAATC+TGG - chr1_1:56290808-56290827 Msa0030200:intron 30.0%
CAGTAACAAAACATCAAGAA+GGG + chr1_1:56290849-56290868 None:intergenic 30.0%
TCAGTAACAAAACATCAAGA+AGG + chr1_1:56290850-56290869 None:intergenic 30.0%
TGAAGAAAGACATAACAAAC+AGG - chr1_1:56290867-56290886 Msa0030200:CDS 30.0%
!! CGAAGTATTTTCAGAAGAAT+GGG - chr1_1:56291009-56291028 Msa0030200:intron 30.0%
! TTATTAATTTTTCCCTCGAC+AGG - chr1_1:56291257-56291276 Msa0030200:intron 30.0%
CAGAAAGCAGAGAAAATATA+TGG + chr1_1:56291359-56291378 None:intergenic 30.0%
!! TCTTACCAGAAAAAGTGTTT+GGG - chr1_1:56291391-56291410 Msa0030200:intron 30.0%
! AATCCTTGATTTTCATGCTT+GGG - chr1_1:56291512-56291531 Msa0030200:intron 30.0%
! GTAAGTTGGAAGATTTAATG+TGG + chr1_1:56291539-56291558 None:intergenic 30.0%
CACATACATAAACACATAAG+TGG + chr1_1:56291621-56291640 None:intergenic 30.0%
TCATTCAAAGCATGTATTTG+AGG - chr1_1:56291652-56291671 Msa0030200:intron 30.0%
!! GGTTTTCAAGACAATACTTT+TGG - chr1_1:56291743-56291762 Msa0030200:intron 30.0%
!! AATCATGTATAAAGTACCGT+AGG + chr1_1:56291909-56291928 None:intergenic 30.0%
AATGGTGAAGTTACAATACT+AGG + chr1_1:56291934-56291953 None:intergenic 30.0%
TTATGATCTGCATCTTACAA+TGG - chr1_1:56291957-56291976 Msa0030200:intron 30.0%
! GTACAAAATGTTAAAGCATC+TGG + chr1_1:56292097-56292116 None:intergenic 30.0%
AACAGTATACAAGTATGACT+TGG - chr1_1:56292155-56292174 Msa0030200:intron 30.0%
ATTTCCTCTCTGTTCATAAA+AGG + chr1_1:56292197-56292216 None:intergenic 30.0%
! TCTAGTTTGAACAACAATTC+AGG + chr1_1:56292292-56292311 None:intergenic 30.0%
! TTGTTGTTCAAACTAGAATC+AGG - chr1_1:56292295-56292314 Msa0030200:intron 30.0%
TTGTTGCATTATTTGTGATC+TGG + chr1_1:56292350-56292369 None:intergenic 30.0%
TATTAATGCTAAAGCAGTCT+TGG - chr1_1:56292754-56292773 Msa0030200:intron 30.0%
TACTAAGATTGTGATATCAG+TGG - chr1_1:56292850-56292869 Msa0030200:intron 30.0%
TCTTGTAGATGCAAGAAAAA+AGG - chr1_1:56293057-56293076 Msa0030200:CDS 30.0%
TAAATTTCTCTGTCATTGTG+AGG - chr1_1:56293083-56293102 Msa0030200:CDS 30.0%
TGTTGTGAGGAATATAACAA+TGG - chr1_1:56293132-56293151 Msa0030200:intron 30.0%
GATCATTCAGATAAAGATGT+TGG - chr1_1:56293199-56293218 Msa0030200:intron 30.0%
AGATAAAGATGTTGGAGAAA+AGG - chr1_1:56293207-56293226 Msa0030200:intron 30.0%
! ACATATTTTACCTATGCCAT+TGG - chr1_1:56293425-56293444 Msa0030200:CDS 30.0%
CCTATATATAGTAGATCCAA+TGG + chr1_1:56293444-56293463 None:intergenic 30.0%
CCATTGGATCTACTATATAT+AGG - chr1_1:56293441-56293460 Msa0030200:CDS 30.0%
AACAAGAACAGAAACAAGAT+GGG + chr1_1:56294043-56294062 None:intergenic 30.0%
TAACAAGAACAGAAACAAGA+TGG + chr1_1:56294044-56294063 None:intergenic 30.0%
! TGTTTCTGTTCTTGTTACTT+TGG - chr1_1:56294047-56294066 Msa0030200:intron 30.0%
AAAAAATATCATGGAGCTTC+TGG - chr1_1:56294113-56294132 Msa0030200:intron 30.0%
! GTTGGGTATATTTCTAACAA+TGG + chr1_1:56294334-56294353 None:intergenic 30.0%
GATATGTTGGCAACATTTAT+TGG - chr1_1:56294394-56294413 Msa0030200:intron 30.0%
AAAAGTCAAAAATCCTTCCA+TGG + chr1_1:56294450-56294469 None:intergenic 30.0%
!! TCAATGTTTTGAACTGAATG+AGG + chr1_1:56294502-56294521 None:intergenic 30.0%
!! AACATTGATTTAGTGGAAGA+AGG - chr1_1:56294514-56294533 Msa0030200:intron 30.0%
! TGTTCAAGCCTCTTTTTATA+AGG - chr1_1:56294584-56294603 Msa0030200:intron 30.0%
! AGTCAAAAGACACTTTGTTT+AGG - chr1_1:56294785-56294804 Msa0030200:intron 30.0%
! CTAAGCAAGTATTTGAAGTA+AGG + chr1_1:56295050-56295069 None:intergenic 30.0%
! GACTCGAACTAAACATTTTA+AGG + chr1_1:56295106-56295125 None:intergenic 30.0%
! GAAAAAGAAGGCTAAGATTT+TGG - chr1_1:56295130-56295149 Msa0030200:CDS 30.0%
AAAAATTCACTCGATGAAAC+GGG + chr1_1:56295384-56295403 None:intergenic 30.0%
CAAAAATTCACTCGATGAAA+CGG + chr1_1:56295385-56295404 None:intergenic 30.0%
!! AGATCAAGTTGAGAAACAAT+AGG + chr1_1:56295585-56295604 None:intergenic 30.0%
AAAAATTTGTAAGCTGCAAG+AGG + chr1_1:56295817-56295836 None:intergenic 30.0%
!! CTTCTTTCAAGTTATCTACA+AGG + chr1_1:56295930-56295949 None:intergenic 30.0%
GTAGACCAATGAACATATTA+TGG - chr1_1:56296143-56296162 Msa0030200:exon 30.0%
AATGGCCATAATATGTTCAT+TGG + chr1_1:56296151-56296170 None:intergenic 30.0%
ATTATGGCCATTTAAAGGAA+AGG - chr1_1:56296159-56296178 Msa0030200:five_prime_UTR 30.0%
! AAGCGTGAATCCTTTTTAAA+TGG - chr1_1:56296278-56296297 Msa0030200:five_prime_UTR 30.0%
TTAGAGGAAATTTCAGTTGG+CGG - chr1_1:56278277-56278296 Msa0030200:three_prime_UTR 35.0%
GAATTGAGAAGTTAGGGTTA+GGG + chr1_1:56278406-56278425 None:intergenic 35.0%
AGAATTGAGAAGTTAGGGTT+AGG + chr1_1:56278407-56278426 None:intergenic 35.0%
GAAGGAAGAATTGAGAAGTT+AGG + chr1_1:56278413-56278432 None:intergenic 35.0%
! TTGCTAGAATTTTGCGATGA+AGG + chr1_1:56278431-56278450 None:intergenic 35.0%
TCATCGCAAAATTCTAGCAA+TGG - chr1_1:56278431-56278450 Msa0030200:three_prime_UTR 35.0%
TTAGGATCGAACAAGATAGA+AGG + chr1_1:56278540-56278559 None:intergenic 35.0%
!!! TGAGTTTTTGGTTGTGTTTC+AGG - chr1_1:56278713-56278732 Msa0030200:CDS 35.0%
!! TTTTGGTTGTGTTTCAGGAT+TGG - chr1_1:56278718-56278737 Msa0030200:CDS 35.0%
CTATCCAATTCTTTACTCTG+GGG + chr1_1:56278800-56278819 None:intergenic 35.0%
CTCTATCCAATTCTTTACTC+TGG + chr1_1:56278802-56278821 None:intergenic 35.0%
CAGAGTAAAGAATTGGATAG+AGG - chr1_1:56278800-56278819 Msa0030200:intron 35.0%
GGTTGTGTTGTGAATTGTAA+TGG - chr1_1:56279170-56279189 Msa0030200:intron 35.0%
GGTATATGGGAGTTTCTTAA+AGG - chr1_1:56279227-56279246 Msa0030200:intron 35.0%
! TCTTAAAGGTGTGAAAGACT+CGG - chr1_1:56279241-56279260 Msa0030200:intron 35.0%
!! TGCTGTTGTTGTTGAAGTTT+TGG - chr1_1:56279464-56279483 Msa0030200:CDS 35.0%
!! GCTGTTGTTGTTGAAGTTTT+GGG - chr1_1:56279465-56279484 Msa0030200:CDS 35.0%
TCTGAAAGATCCTTCTTATC+AGG + chr1_1:56279552-56279571 None:intergenic 35.0%
! ATATTTGGGGTATCATTTGG+TGG - chr1_1:56279604-56279623 Msa0030200:intron 35.0%
!! GTGACGACCTTTTGTTTATT+TGG - chr1_1:56279632-56279651 Msa0030200:intron 35.0%
TAAATGGATCTTGACATGAG+GGG + chr1_1:56279697-56279716 None:intergenic 35.0%
GTAAATGGATCTTGACATGA+GGG + chr1_1:56279698-56279717 None:intergenic 35.0%
TGTAAATGGATCTTGACATG+AGG + chr1_1:56279699-56279718 None:intergenic 35.0%
! TGTTTGATATTGCTATTCCG+GGG + chr1_1:56279888-56279907 None:intergenic 35.0%
AATAACCAAATCCACATAGC+TGG - chr1_1:56279915-56279934 Msa0030200:CDS 35.0%
ACTCAATAAAACAACCACTC+AGG + chr1_1:56279946-56279965 None:intergenic 35.0%
TGCATTATATATGCAAGGTC+CGG - chr1_1:56280117-56280136 Msa0030200:CDS 35.0%
!!! TTTTTTTTTTTGTGGTGGCC+GGG + chr1_1:56280188-56280207 None:intergenic 35.0%
!!! CTTTTTTTTTTTGTGGTGGC+CGG + chr1_1:56280189-56280208 None:intergenic 35.0%
! CTCCATATTTGAAATTGAGG+AGG - chr1_1:56280220-56280239 Msa0030200:CDS 35.0%
!! TTTGAGAAACAGTTGGTTTG+TGG + chr1_1:56280288-56280307 None:intergenic 35.0%
ATGTGTGTTTGAGAAACAGT+TGG + chr1_1:56280295-56280314 None:intergenic 35.0%
TGTTCTTTGGTCTATTTGAC+GGG + chr1_1:56280353-56280372 None:intergenic 35.0%
ACACAGTGAATGATGTTCTT+TGG + chr1_1:56280366-56280385 None:intergenic 35.0%
CTAACATAGACCTTCCTAAT+GGG + chr1_1:56280457-56280476 None:intergenic 35.0%
ACTAACATAGACCTTCCTAA+TGG + chr1_1:56280458-56280477 None:intergenic 35.0%
GTCTATGTTAGTAAACTTGG+AGG - chr1_1:56280466-56280485 Msa0030200:CDS 35.0%
! AGTAAACTTGGAGGTATAGT+TGG - chr1_1:56280475-56280494 Msa0030200:CDS 35.0%
! GTAAACTTGGAGGTATAGTT+GGG - chr1_1:56280476-56280495 Msa0030200:CDS 35.0%
TGTGAAAAGGGGAATAAAAG+AGG - chr1_1:56280550-56280569 Msa0030200:CDS 35.0%
AATGACAATAGTGCAACAGA+AGG + chr1_1:56280798-56280817 None:intergenic 35.0%
! TGTTGCACTATTGTCATTTC+AGG - chr1_1:56280800-56280819 Msa0030200:CDS 35.0%
!! TTGATGATAGTTTGCTTGCT+TGG - chr1_1:56280831-56280850 Msa0030200:CDS 35.0%
!! TTAGCTCCATCACTTTTGAA+TGG - chr1_1:56280867-56280886 Msa0030200:CDS 35.0%
TACCTGGACAAGATTGATTA+AGG + chr1_1:56280973-56280992 None:intergenic 35.0%
!! TGGAAGTGTGTCAACATTTT+GGG + chr1_1:56281126-56281145 None:intergenic 35.0%
!! TTGGAAGTGTGTCAACATTT+TGG + chr1_1:56281127-56281146 None:intergenic 35.0%
! TCAAACTGCTCAACTTTTTG+AGG - chr1_1:56281188-56281207 Msa0030200:intron 35.0%
GGCAAATCCCTATAAGAAAA+AGG + chr1_1:56281273-56281292 None:intergenic 35.0%
! TTTTCTTATAGGGATTTGCC+TGG - chr1_1:56281273-56281292 Msa0030200:intron 35.0%
TTTCTTATAGGGATTTGCCT+GGG - chr1_1:56281274-56281293 Msa0030200:intron 35.0%
GACAATTCTAATAAAACCCC+AGG + chr1_1:56281294-56281313 None:intergenic 35.0%
! TTTGCTGTCCTTGATAGAAA+AGG - chr1_1:56281489-56281508 Msa0030200:CDS 35.0%
GATGAACAGAGTCATTTATG+GGG + chr1_1:56281516-56281535 None:intergenic 35.0%
AAATGACTCTGTTCATCATG+TGG - chr1_1:56281519-56281538 Msa0030200:CDS 35.0%
TTGGAAATGGATCTGATGAA+CGG - chr1_1:56281663-56281682 Msa0030200:intron 35.0%
GCATCAAATGATATTTGACC+AGG + chr1_1:56281807-56281826 None:intergenic 35.0%
! AGCAGTTCATCATTTTCTTC+AGG - chr1_1:56281936-56281955 Msa0030200:intron 35.0%
TAAGATGTTGGATGGCAATT+TGG - chr1_1:56282099-56282118 Msa0030200:intron 35.0%
TCGATGTCAAAAGTTTGGTT+TGG - chr1_1:56282139-56282158 Msa0030200:intron 35.0%
TTCAATAGAAAGTCAGTGTG+TGG + chr1_1:56282184-56282203 None:intergenic 35.0%
AACAAGAGAATACACACTTC+AGG + chr1_1:56282224-56282243 None:intergenic 35.0%
! AAACAAGGCATTTGTTTCAG+AGG - chr1_1:56282357-56282376 Msa0030200:CDS 35.0%
!!! TATAAACGTACAGTTTTGGG+AGG + chr1_1:56282411-56282430 None:intergenic 35.0%
AAGTCATTCCACATAATCGT+TGG - chr1_1:56282759-56282778 Msa0030200:intron 35.0%
AGTCATTCCACATAATCGTT+GGG - chr1_1:56282760-56282779 Msa0030200:intron 35.0%
!! TGATAGAAGACTTGATTTGG+AGG - chr1_1:56282801-56282820 Msa0030200:intron 35.0%
GATTATGTGGTGTACAAAGT+AGG - chr1_1:56283219-56283238 Msa0030200:CDS 35.0%
TTATGTGGTGTACAAAGTAG+GGG - chr1_1:56283221-56283240 Msa0030200:CDS 35.0%
!! AGCTGATTTGAAGTTGACAT+GGG - chr1_1:56283376-56283395 Msa0030200:intron 35.0%
! GTCAAAGCTTTAGTTGTGTT+GGG - chr1_1:56283416-56283435 Msa0030200:intron 35.0%
! GGGGATTTAAAACATGGAAT+AGG + chr1_1:56283540-56283559 None:intergenic 35.0%
! ATGGTTGGGGATTTAAAACA+TGG + chr1_1:56283546-56283565 None:intergenic 35.0%
ACGGTATAGTTAAATGGTTG+GGG + chr1_1:56283559-56283578 None:intergenic 35.0%
GAACGGTATAGTTAAATGGT+TGG + chr1_1:56283561-56283580 None:intergenic 35.0%
GGTAGAACGGTATAGTTAAA+TGG + chr1_1:56283565-56283584 None:intergenic 35.0%
!! CCCAAAATGTTTTGTTGATC+AGG - chr1_1:56283583-56283602 Msa0030200:CDS 35.0%
! CCCTGATCAACAAAACATTT+TGG + chr1_1:56283587-56283606 None:intergenic 35.0%
AATGTGCTAAGAAGATGTGT+TGG - chr1_1:56283737-56283756 Msa0030200:CDS 35.0%
TCCAAAATGAATATGGTGAC+TGG - chr1_1:56283869-56283888 Msa0030200:CDS 35.0%
! ACCAGTCACCATATTCATTT+TGG + chr1_1:56283873-56283892 None:intergenic 35.0%
CTCTATGCATGATAGAAAGA+TGG + chr1_1:56284066-56284085 None:intergenic 35.0%
AGCAGCATAATAAAGTTCAG+AGG + chr1_1:56284485-56284504 None:intergenic 35.0%
AGCAAGAGCTTAACTAGATT+GGG + chr1_1:56284546-56284565 None:intergenic 35.0%
AAGCAAGAGCTTAACTAGAT+TGG + chr1_1:56284547-56284566 None:intergenic 35.0%
TATTCCCTAACAAAACCCAA+AGG - chr1_1:56284594-56284613 Msa0030200:intron 35.0%
!!! ACTTCCTTTGGGTTTTGTTA+GGG + chr1_1:56284601-56284620 None:intergenic 35.0%
!!! AACTTCCTTTGGGTTTTGTT+AGG + chr1_1:56284602-56284621 None:intergenic 35.0%
TAAATCACCAATCGTATGCA+GGG + chr1_1:56284769-56284788 None:intergenic 35.0%
TTAAATCACCAATCGTATGC+AGG + chr1_1:56284770-56284789 None:intergenic 35.0%
ACCAGCAAGACTAACATTAT+CGG + chr1_1:56284820-56284839 None:intergenic 35.0%
! CTGATCATGGAAGTATGATA+TGG + chr1_1:56284871-56284890 None:intergenic 35.0%
ATACTTCCATGATCAGTACT+TGG - chr1_1:56284875-56284894 Msa0030200:intron 35.0%
TAAGTAAGAACACGCAAAGT+CGG + chr1_1:56284974-56284993 None:intergenic 35.0%
CAATAAGAGAAGTAATCGTC+AGG + chr1_1:56285038-56285057 None:intergenic 35.0%
AGAAACGGTAAGTAACTACA+TGG - chr1_1:56285135-56285154 Msa0030200:CDS 35.0%
GAAACGGTAAGTAACTACAT+GGG - chr1_1:56285136-56285155 Msa0030200:CDS 35.0%
! GCTTTTCTAACAACAGACTT+CGG + chr1_1:56285214-56285233 None:intergenic 35.0%
AAGATACTTGTGGTACTAGA+CGG + chr1_1:56285457-56285476 None:intergenic 35.0%
CCAAAACATCAAGATACTTG+TGG + chr1_1:56285467-56285486 None:intergenic 35.0%
! CCACAAGTATCTTGATGTTT+TGG - chr1_1:56285464-56285483 Msa0030200:intron 35.0%
AAAATTGGCTGGCAATTTCA+TGG - chr1_1:56285614-56285633 Msa0030200:intron 35.0%
! CTTGTGCTGATAAAACCAAA+AGG - chr1_1:56285729-56285748 Msa0030200:intron 35.0%
AAGTGTGTTTCCTATTCTGA+AGG - chr1_1:56285919-56285938 Msa0030200:CDS 35.0%
! GCCATAACTTTTGCATTTAG+AGG + chr1_1:56286164-56286183 None:intergenic 35.0%
!! TTATGGCTTGCATATTTTGG+AGG - chr1_1:56286177-56286196 Msa0030200:CDS 35.0%
AGATTGCCTGATGATTTATC+TGG + chr1_1:56286221-56286240 None:intergenic 35.0%
TAAATCATCAGGCAATCTAC+TGG - chr1_1:56286223-56286242 Msa0030200:intron 35.0%
GAATTCCAAACAAATACGGA+AGG + chr1_1:56286258-56286277 None:intergenic 35.0%
ACATAGTTAGCTATGTACCT+AGG - chr1_1:56286316-56286335 Msa0030200:intron 35.0%
AGTGCATTATGTCATTACCT+AGG + chr1_1:56286336-56286355 None:intergenic 35.0%
GGTAATGACATAATGCACTT+AGG - chr1_1:56286337-56286356 Msa0030200:intron 35.0%
TGCTAAAAGTGAATAAGCAG+AGG - chr1_1:56286424-56286443 Msa0030200:intron 35.0%
! ATGAACCTTTTGCAATATGC+AGG - chr1_1:56286526-56286545 Msa0030200:intron 35.0%
ATCATCCTGCATATTGCAAA+AGG + chr1_1:56286534-56286553 None:intergenic 35.0%
ATATGGAGTACATCAAGCAA+CGG + chr1_1:56286705-56286724 None:intergenic 35.0%
! TGAGATCTTGCCATTTACAA+AGG + chr1_1:56286793-56286812 None:intergenic 35.0%
!! GGTTCTGAAGCATTATACAT+TGG - chr1_1:56286920-56286939 Msa0030200:intron 35.0%
ATATATGCAGCAAGCAGATA+AGG + chr1_1:56287137-56287156 None:intergenic 35.0%
! CTGCTTGCTGCATATATATA+TGG - chr1_1:56287140-56287159 Msa0030200:intron 35.0%
GCTGCATATATATATGGTTG+TGG - chr1_1:56287146-56287165 Msa0030200:intron 35.0%
! GGATGTTCTCTTGATTTTTG+AGG - chr1_1:56287218-56287237 Msa0030200:intron 35.0%
GAAATTCTTTGCAGTCTGTA+AGG - chr1_1:56287278-56287297 Msa0030200:CDS 35.0%
TTGTTAAGTTACACGCTTTG+CGG - chr1_1:56287320-56287339 Msa0030200:intron 35.0%
ACCTTCATAACTTCCTAAAC+TGG - chr1_1:56287415-56287434 Msa0030200:intron 35.0%
ACCAGTTTAGGAAGTTATGA+AGG + chr1_1:56287419-56287438 None:intergenic 35.0%
TTCCTAAACTGGTTACAACA+GGG - chr1_1:56287426-56287445 Msa0030200:intron 35.0%
TTAGAAGTTCTTCCAGAAAC+TGG + chr1_1:56287454-56287473 None:intergenic 35.0%
TACCTCCAAATATGCAAAAC+AGG - chr1_1:56287585-56287604 Msa0030200:CDS 35.0%
! TACCTGTTTTGCATATTTGG+AGG + chr1_1:56287590-56287609 None:intergenic 35.0%
CTGTGACTATTTCATCTGAA+TGG - chr1_1:56287620-56287639 Msa0030200:intron 35.0%
CTCTACACATTTGAAAGATC+TGG + chr1_1:56287714-56287733 None:intergenic 35.0%
CAGATCTTTCAAATGTGTAG+AGG - chr1_1:56287712-56287731 Msa0030200:intron 35.0%
GATCTTTCAAATGTGTAGAG+GGG - chr1_1:56287714-56287733 Msa0030200:intron 35.0%
! GAAAGTACAGATTAGGGTTT+AGG - chr1_1:56287844-56287863 Msa0030200:intron 35.0%
!! TGTTGAAGGGTAATTTTGAC+CGG - chr1_1:56288245-56288264 Msa0030200:intron 35.0%
!!! GAGTTCATTTTGGGTTATAC+TGG - chr1_1:56288413-56288432 Msa0030200:CDS 35.0%
ACAGAAGAGAATCAATGTGA+AGG + chr1_1:56288469-56288488 None:intergenic 35.0%
AATGATTCTTTCCTTGCTCA+AGG - chr1_1:56288641-56288660 Msa0030200:CDS 35.0%
ATGATTCTTTCCTTGCTCAA+GGG - chr1_1:56288642-56288661 Msa0030200:CDS 35.0%
! TAGGATACTGTGTCTTTTGT+TGG - chr1_1:56288764-56288783 Msa0030200:intron 35.0%
AGACATTACACAGTTCTACA+TGG + chr1_1:56288868-56288887 None:intergenic 35.0%
!!! TTTTTCAAGACAGTGATGCA+AGG + chr1_1:56289067-56289086 None:intergenic 35.0%
AGTAGACATGTACAATCTCT+TGG - chr1_1:56289181-56289200 Msa0030200:intron 35.0%
TAGGTTACAGTAGAGACTAT+TGG + chr1_1:56289258-56289277 None:intergenic 35.0%
GTACATCACCATTAGCATTA+CGG + chr1_1:56289476-56289495 None:intergenic 35.0%
TGTACAAATTGCAACTAGAG+AGG - chr1_1:56289491-56289510 Msa0030200:CDS 35.0%
!!! CAATTGGCTTATTTTAGGGT+AGG + chr1_1:56289784-56289803 None:intergenic 35.0%
!! GTCTGCAATTGGCTTATTTT+AGG + chr1_1:56289789-56289808 None:intergenic 35.0%
TTGAAGAACTTGTCTGCAAT+TGG + chr1_1:56289800-56289819 None:intergenic 35.0%
TGAAAATATGCCGGGAAAAT+TGG - chr1_1:56290266-56290285 Msa0030200:intron 35.0%
GAAAATATGCCGGGAAAATT+GGG - chr1_1:56290267-56290286 Msa0030200:intron 35.0%
! TATTGTCAACCCAATTTTCC+CGG + chr1_1:56290279-56290298 None:intergenic 35.0%
ATATTTAGCCATGCTATCCT+TGG - chr1_1:56290346-56290365 Msa0030200:intron 35.0%
AACATAATCCAAGGATAGCA+TGG + chr1_1:56290357-56290376 None:intergenic 35.0%
!! TCATTCTTTGAAATGGAAGC+AGG + chr1_1:56290585-56290604 None:intergenic 35.0%
GACATAACAAACAGGTGATT+TGG - chr1_1:56290875-56290894 Msa0030200:CDS 35.0%
TAGTACCATGCCAGAAAAAT+TGG - chr1_1:56290907-56290926 Msa0030200:CDS 35.0%
! ACTGATGTGTCCAATTTTTC+TGG + chr1_1:56290920-56290939 None:intergenic 35.0%
!! GCGAAGTATTTTCAGAAGAA+TGG - chr1_1:56291008-56291027 Msa0030200:intron 35.0%
! ACAGACTCTATTGATTATCC+TGG - chr1_1:56291108-56291127 Msa0030200:intron 35.0%
AATCATGTCTCATGATAGCA+TGG - chr1_1:56291138-56291157 Msa0030200:intron 35.0%
AGCAGGAAAAAAGAGTTAAG+AGG + chr1_1:56291232-56291251 None:intergenic 35.0%
!!! TAGTCATTTTTTCCTGTCGA+GGG + chr1_1:56291272-56291291 None:intergenic 35.0%
!!! TTAGTCATTTTTTCCTGTCG+AGG + chr1_1:56291273-56291292 None:intergenic 35.0%
CAGAGAAAATATATGGTTGC+GGG + chr1_1:56291352-56291371 None:intergenic 35.0%
GCAGAGAAAATATATGGTTG+CGG + chr1_1:56291353-56291372 None:intergenic 35.0%
!! GTCTTACCAGAAAAAGTGTT+TGG - chr1_1:56291390-56291409 Msa0030200:intron 35.0%
TCAAGGATTGAAGAAAAGCA+GGG + chr1_1:56291501-56291520 None:intergenic 35.0%
ATCAAGGATTGAAGAAAAGC+AGG + chr1_1:56291502-56291521 None:intergenic 35.0%
! CAATCCTTGATTTTCATGCT+TGG - chr1_1:56291511-56291530 Msa0030200:intron 35.0%
TGATGTGGAGAAATTACTGA+AGG - chr1_1:56291718-56291737 Msa0030200:intron 35.0%
AGAATTACTTCCACTCATGT+AGG + chr1_1:56291783-56291802 None:intergenic 35.0%
! CGACTATTTTGCAGAACTTT+GGG - chr1_1:56291980-56291999 Msa0030200:intron 35.0%
TGTTCACTTCCTTAGTTTCA+AGG - chr1_1:56292041-56292060 Msa0030200:intron 35.0%
! GTTTCCTTTTATGAACAGAG+AGG - chr1_1:56292190-56292209 Msa0030200:intron 35.0%
!! AATGTTTCTGGAGTTGTTTC+TGG - chr1_1:56292234-56292253 Msa0030200:CDS 35.0%
TTCAAACTAGAATCAGGAGA+AGG - chr1_1:56292301-56292320 Msa0030200:intron 35.0%
TATATTGGGCAAAGTCTTGA+TGG - chr1_1:56292405-56292424 Msa0030200:intron 35.0%
!! ATGAAATGTGATGGATTGCA+TGG - chr1_1:56292541-56292560 Msa0030200:intron 35.0%
! GTTTTGCTTACAATAGTGAC+CGG + chr1_1:56292584-56292603 None:intergenic 35.0%
CATTGAATAAGTGATGTACG+TGG + chr1_1:56292658-56292677 None:intergenic 35.0%
! TTTAGCAAGGTACTCATCTT+TGG - chr1_1:56292726-56292745 Msa0030200:intron 35.0%
CTAATATTGCAGAGTCAACT+CGG - chr1_1:56293001-56293020 Msa0030200:CDS 35.0%
ATGCTCTTGAAGTATATCGA+AGG + chr1_1:56293166-56293185 None:intergenic 35.0%
ATATCCTAAATCCAATGTCC+TGG + chr1_1:56293341-56293360 None:intergenic 35.0%
TATAGTAGATCCAATGGCAT+AGG + chr1_1:56293438-56293457 None:intergenic 35.0%
TGTTTGATGAATCGTCATCA+AGG + chr1_1:56293741-56293760 None:intergenic 35.0%
ATCAAACAACTCCTTGAAAG+TGG - chr1_1:56293753-56293772 Msa0030200:CDS 35.0%
ATCCTTAGAGGACTTTATCA+CGG + chr1_1:56293977-56293996 None:intergenic 35.0%
! GATAAAGTCCTCTAAGGATT+TGG - chr1_1:56293978-56293997 Msa0030200:intron 35.0%
! TTTTCGTTCCAAATCCTTAG+AGG + chr1_1:56293989-56294008 None:intergenic 35.0%
ACAAGAACAGAAACAAGATG+GGG + chr1_1:56294042-56294061 None:intergenic 35.0%
!! TTCTGTTCTTGTTACTTTGG+AGG - chr1_1:56294050-56294069 Msa0030200:intron 35.0%
TCTATTCCTGAGACAAATTC+TGG + chr1_1:56294147-56294166 None:intergenic 35.0%
TTGCGGAAAAAATTCCAGTA+AGG - chr1_1:56294208-56294227 Msa0030200:intron 35.0%
! ATACTTTTAGCAAGCCTTAC+TGG + chr1_1:56294225-56294244 None:intergenic 35.0%
AAGTATGTATTGTTGGATGG+AGG - chr1_1:56294239-56294258 Msa0030200:intron 35.0%
! GGGTATATTTCTAACAATGG+CGG + chr1_1:56294331-56294350 None:intergenic 35.0%
GGCAACATTTATTGGTACAA+TGG - chr1_1:56294402-56294421 Msa0030200:intron 35.0%
AATGGACAGATCATCTATTG+TGG - chr1_1:56294420-56294439 Msa0030200:intron 35.0%
TACCATGCCATAGAAAGATA+TGG + chr1_1:56294662-56294681 None:intergenic 35.0%
AAATAAGCGTGTGCTTTATG+AGG - chr1_1:56294755-56294774 Msa0030200:intron 35.0%
AGTAACTGTGTTCATCATCT+TGG - chr1_1:56295068-56295087 Msa0030200:CDS 35.0%
TTCGAGTCAGAAGAAAAAGA+AGG - chr1_1:56295118-56295137 Msa0030200:CDS 35.0%
AACAGATATCTTGTCTGTCA+AGG - chr1_1:56295172-56295191 Msa0030200:intron 35.0%
ACAGATATCTTGTCTGTCAA+GGG - chr1_1:56295173-56295192 Msa0030200:intron 35.0%
ATAGAGGAAACACTTGTGTA+AGG + chr1_1:56295228-56295247 None:intergenic 35.0%
TCTTGACTCATCAAATTTCC+AGG - chr1_1:56295268-56295287 Msa0030200:CDS 35.0%
AGTGGAAAAATATACTAGCC+TGG + chr1_1:56295289-56295308 None:intergenic 35.0%
AAGACACGAGCTAGAATATT+GGG - chr1_1:56295886-56295905 Msa0030200:intron 35.0%
TTCAGTTAAATCTCTTGCAC+AGG - chr1_1:56296014-56296033 Msa0030200:CDS 35.0%
AGGAAATAGAGTCTTTGAGT+GGG - chr1_1:56296046-56296065 Msa0030200:CDS 35.0%
CTCAACGAATCTAACATCAT+AGG + chr1_1:56296089-56296108 None:intergenic 35.0%
AATGCCACCTTTCCTTTAAA+TGG + chr1_1:56296169-56296188 None:intergenic 35.0%
! GGATTCACGCTTTTAATGAT+CGG + chr1_1:56296270-56296289 None:intergenic 35.0%
! CGTGTTCTTCTTCTTCGTTT+TGG + chr1_1:56278372-56278391 None:intergenic 40.0%
AAACGAAGAAGAAGAACACG+AGG - chr1_1:56278372-56278391 Msa0030200:three_prime_UTR 40.0%
! AAGTTAGGGTTAGGGTTTTG+TGG + chr1_1:56278398-56278417 None:intergenic 40.0%
TCTAGCAATGGCAAATTCCT+TGG - chr1_1:56278443-56278462 Msa0030200:three_prime_UTR 40.0%
AGCTTGTAATTGAGAAGCCA+AGG + chr1_1:56278463-56278482 None:intergenic 40.0%
AAGATAGAAGGACGAGTGAA+CGG + chr1_1:56278528-56278547 None:intergenic 40.0%
GGATTCAGTACTCTTATCAG+CGG + chr1_1:56278568-56278587 None:intergenic 40.0%
!! TTCTGATTAGCACCGATGAA+AGG - chr1_1:56278744-56278763 Msa0030200:intron 40.0%
!! TTAGCACCGATGAAAGGTTT+AGG - chr1_1:56278750-56278769 Msa0030200:intron 40.0%
GATACATGAGCACAATGTTG+AGG - chr1_1:56279041-56279060 Msa0030200:intron 40.0%
! CTTAAAGGTGTGAAAGACTC+GGG - chr1_1:56279242-56279261 Msa0030200:intron 40.0%
TGCTGCACTATAACCATTCT+AGG + chr1_1:56279278-56279297 None:intergenic 40.0%
!!! TTGTTGAAGTTTTGGGTGTG+AGG - chr1_1:56279472-56279491 Msa0030200:CDS 40.0%
!!! TGTTGAAGTTTTGGGTGTGA+GGG - chr1_1:56279473-56279492 Msa0030200:CDS 40.0%
TGAAGACCAGAATTCACGAA+AGG + chr1_1:56279528-56279547 None:intergenic 40.0%
GAAGGATCTTTCAGATCACA+AGG - chr1_1:56279557-56279576 Msa0030200:intron 40.0%
AAATGGATCTTGACATGAGG+GGG + chr1_1:56279696-56279715 None:intergenic 40.0%
CATATCCAGCTATGTGGATT+TGG + chr1_1:56279923-56279942 None:intergenic 40.0%
GCATTATATATGCAAGGTCC+GGG - chr1_1:56280118-56280137 Msa0030200:CDS 40.0%
CATTATATATGCAAGGTCCG+GGG - chr1_1:56280119-56280138 Msa0030200:CDS 40.0%
!!! AACCTTTTTTTTGTGGTGGC+CGG + chr1_1:56280153-56280172 None:intergenic 40.0%
GCCACCACAAAAAAAAGGTT+CGG - chr1_1:56280153-56280172 Msa0030200:CDS 40.0%
CCACCACAAAAAAAAGGTTC+GGG - chr1_1:56280154-56280173 Msa0030200:CDS 40.0%
CACCACAAAAAAAAGGTTCG+GGG - chr1_1:56280155-56280174 Msa0030200:CDS 40.0%
!!! AACCCCGAACCTTTTTTTTG+TGG + chr1_1:56280160-56280179 None:intergenic 40.0%
!!! TTTTTTTTTTGTGGTGGCCG+GGG + chr1_1:56280187-56280206 None:intergenic 40.0%
!! GTTGGTTTGTGGTCTTTGTT+TGG + chr1_1:56280277-56280296 None:intergenic 40.0%
TTGCAAACTTCCCATTAGGA+AGG - chr1_1:56280444-56280463 Msa0030200:CDS 40.0%
ATACGTGTTCAGTTATAGGG+AGG - chr1_1:56280523-56280542 Msa0030200:CDS 40.0%
TACGTGTTCAGTTATAGGGA+GGG - chr1_1:56280524-56280543 Msa0030200:CDS 40.0%
! AATCAACTGGCTCAAAAGGT+TGG + chr1_1:56280580-56280599 None:intergenic 40.0%
! CCTTTTGAGCCAGTTGATTA+CGG - chr1_1:56280581-56280600 Msa0030200:CDS 40.0%
! CTTTTGAGCCAGTTGATTAC+GGG - chr1_1:56280582-56280601 Msa0030200:CDS 40.0%
! TTTTGAGCCAGTTGATTACG+GGG - chr1_1:56280583-56280602 Msa0030200:CDS 40.0%
AGGAGGCTAAAGATCTTCAT+TGG - chr1_1:56280928-56280947 Msa0030200:CDS 40.0%
TGCCTTAATCAATCTTGTCC+AGG - chr1_1:56280968-56280987 Msa0030200:CDS 40.0%
TTCTGTAACAGCATAGTACC+TGG + chr1_1:56280989-56281008 None:intergenic 40.0%
!!! TGTGTCAACATTTTGGGACT+AGG + chr1_1:56281120-56281139 None:intergenic 40.0%
ATGGCAACAGCGAAATTACA+AGG + chr1_1:56281216-56281235 None:intergenic 40.0%
TTCTTATAGGGATTTGCCTG+GGG - chr1_1:56281275-56281294 Msa0030200:intron 40.0%
! TATGGGGACCTTTTCTATCA+AGG + chr1_1:56281500-56281519 None:intergenic 40.0%
!! CACACAAGTTGATAGGATCT+TGG + chr1_1:56281548-56281567 None:intergenic 40.0%
TTAATGCAATAGTTGCAGCC+TGG - chr1_1:56281786-56281805 Msa0030200:intron 40.0%
TCAAATGTCAATTAGCTGGC+TGG - chr1_1:56281860-56281879 Msa0030200:intron 40.0%
CAAATGTCAATTAGCTGGCT+GGG - chr1_1:56281861-56281880 Msa0030200:intron 40.0%
GAAAATGATGAACTGCTGCA+CGG + chr1_1:56281933-56281952 None:intergenic 40.0%
!! GTTTGGCTTGTATCATCCAA+AGG - chr1_1:56282156-56282175 Msa0030200:intron 40.0%
TTCGGGCATCTTGAAAAACA+AGG - chr1_1:56282342-56282361 Msa0030200:CDS 40.0%
ATTCCACATAATCGTTGGGT+TGG - chr1_1:56282764-56282783 Msa0030200:intron 40.0%
TTCCACATAATCGTTGGGTT+GGG - chr1_1:56282765-56282784 Msa0030200:intron 40.0%
! GATTTGGAGGTGTACAAAGT+CGG - chr1_1:56282814-56282833 Msa0030200:intron 40.0%
! ATTTGGAGGTGTACAAAGTC+GGG - chr1_1:56282815-56282834 Msa0030200:intron 40.0%
AAGCCATTCCACATAATCGT+TGG - chr1_1:56283164-56283183 Msa0030200:CDS 40.0%
AGCCATTCCACATAATCGTT+GGG - chr1_1:56283165-56283184 Msa0030200:CDS 40.0%
AACCCAACGATTATGTGGAA+TGG + chr1_1:56282765-56282784 None:intergenic 40.0%
ATTCCACATAATCGTTGGGT+TGG - chr1_1:56282764-56282783 Msa0030200:intron 40.0%
TTCCACATAATCGTTGGGTT+GGG - chr1_1:56282765-56282784 Msa0030200:intron 40.0%
!! GAGCTGATTTGAAGTTGACA+TGG - chr1_1:56283375-56283394 Msa0030200:intron 40.0%
!! GCTGATTTGAAGTTGACATG+GGG - chr1_1:56283377-56283396 Msa0030200:intron 40.0%
! GGTCAAAGCTTTAGTTGTGT+TGG - chr1_1:56283415-56283434 Msa0030200:intron 40.0%
! AAAGCTTTAGTTGTGTTGGG+TGG - chr1_1:56283419-56283438 Msa0030200:intron 40.0%
!! CAAGCAGCTTTAAATGTCGA+TGG - chr1_1:56283668-56283687 Msa0030200:intron 40.0%
!! AGCTTTAAATGTCGATGGCT+TGG - chr1_1:56283673-56283692 Msa0030200:intron 40.0%
TCGAGAAGCTTAGAAGAATC+TGG + chr1_1:56283707-56283726 None:intergenic 40.0%
AGATTCTTCTAAGCTTCTCG+AGG - chr1_1:56283706-56283725 Msa0030200:intron 40.0%
! ATTGACTTCTGATCAGCTGT+TGG - chr1_1:56283957-56283976 Msa0030200:intron 40.0%
TTGACTTCTGATCAGCTGTT+GGG - chr1_1:56283958-56283977 Msa0030200:intron 40.0%
TCTTGTTGGATGATACCTGT+TGG - chr1_1:56284008-56284027 Msa0030200:intron 40.0%
! TTGGATGATACCTGTTGGTT+TGG - chr1_1:56284013-56284032 Msa0030200:intron 40.0%
CATGACTATACCAAACCAAC+AGG + chr1_1:56284026-56284045 None:intergenic 40.0%
!! CTGTTGGTTTGGTATAGTCA+TGG - chr1_1:56284024-56284043 Msa0030200:intron 40.0%
AGGTAGTGCCTTCATTAGAA+TGG - chr1_1:56284417-56284436 Msa0030200:intron 40.0%
!! ACCGATAATGTTAGTCTTGC+TGG - chr1_1:56284816-56284835 Msa0030200:intron 40.0%
!! TGCTTTCCAAGTACTGATCA+TGG + chr1_1:56284884-56284903 None:intergenic 40.0%
AAGTAAGAACACGCAAAGTC+GGG + chr1_1:56284973-56284992 None:intergenic 40.0%
ACTTCTCTTATTGCAGACAC+AGG - chr1_1:56285045-56285064 Msa0030200:intron 40.0%
AGATACTTGTGGTACTAGAC+GGG + chr1_1:56285456-56285475 None:intergenic 40.0%
!! GAATGCTGGTGATGTTCTTT+TGG - chr1_1:56285961-56285980 Msa0030200:intron 40.0%
! ATGTTCTTTTGGACGAGGTA+CGG - chr1_1:56285972-56285991 Msa0030200:intron 40.0%
TGGCATACAAAAGCTGATCA+AGG + chr1_1:56286133-56286152 None:intergenic 40.0%
! CAGCTTTTGTATGCCAAACT+CGG - chr1_1:56286137-56286156 Msa0030200:intron 40.0%
CTAGTGCCAGATAAATCATC+AGG - chr1_1:56286212-56286231 Msa0030200:intron 40.0%
AAAGGTTCATTCGTGCAACT+AGG + chr1_1:56286516-56286535 None:intergenic 40.0%
GCAGGATGATAGCAAGATAA+AGG - chr1_1:56286544-56286563 Msa0030200:intron 40.0%
!! CTAAGAAATGGAGGTGTTCA+TGG + chr1_1:56286613-56286632 None:intergenic 40.0%
! TGAACTGTGCTGCTAAGAAA+TGG + chr1_1:56286625-56286644 None:intergenic 40.0%
TATGGAGTACATCAAGCAAC+GGG + chr1_1:56286704-56286723 None:intergenic 40.0%
! GTGCTGTCCCATTTAAGATA+TGG + chr1_1:56286722-56286741 None:intergenic 40.0%
TACAAAGAGATCCATAGCAC+TGG + chr1_1:56287009-56287028 None:intergenic 40.0%
CTTTGTACTCTGCAGCAAAA+TGG - chr1_1:56287022-56287041 Msa0030200:CDS 40.0%
TCCTTCTCTTCTTGTTCCAT+TGG - chr1_1:56287072-56287091 Msa0030200:CDS 40.0%
TGTTAAGTTACACGCTTTGC+GGG - chr1_1:56287321-56287340 Msa0030200:intron 40.0%
CTTCCTAAACTGGTTACAAC+AGG - chr1_1:56287425-56287444 Msa0030200:intron 40.0%
AACCCTGTTGTAACCAGTTT+AGG + chr1_1:56287431-56287450 None:intergenic 40.0%
GGAAGAACTTCTAATTGCGT+TGG - chr1_1:56287460-56287479 Msa0030200:intron 40.0%
ATATTATGATAGGACGAGCC+CGG + chr1_1:56287560-56287579 None:intergenic 40.0%
TGCTTAGCTGCTTCTGTTAT+TGG - chr1_1:56287682-56287701 Msa0030200:intron 40.0%
CAAATGTGTAGAGGGGAATT+TGG - chr1_1:56287721-56287740 Msa0030200:intron 40.0%
TTGACATAGATTGTGTGTCC+TGG - chr1_1:56287783-56287802 Msa0030200:intron 40.0%
TAGGGTTTAGGGATATTCTG+TGG - chr1_1:56287856-56287875 Msa0030200:intron 40.0%
!!! GGGGATACATTTTTTTGGTG+TGG + chr1_1:56288279-56288298 None:intergenic 40.0%
ACTGGGAAATTCTCCAACTA+CGG - chr1_1:56288431-56288450 Msa0030200:CDS 40.0%
TTTCCTTGCTCAAGGGAATT+GGG - chr1_1:56288649-56288668 Msa0030200:CDS 40.0%
! GATACTGTGTCTTTTGTTGG+AGG - chr1_1:56288767-56288786 Msa0030200:intron 40.0%
CTGATGAAACTTCCAATCTG+AGG - chr1_1:56288819-56288838 Msa0030200:intron 40.0%
! GAAACTTCCAATCTGAGGTT+TGG - chr1_1:56288824-56288843 Msa0030200:intron 40.0%
CACAGTTCTACATGGAGAAA+AGG + chr1_1:56288860-56288879 None:intergenic 40.0%
TGTGTAATGTCTTCTCCTTC+AGG - chr1_1:56288876-56288895 Msa0030200:CDS 40.0%
!! CTCTTTACAGAAAGTGTTGC+AGG - chr1_1:56288917-56288936 Msa0030200:CDS 40.0%
TAGGTCACAGTAGAGACTAT+TGG + chr1_1:56289394-56289413 None:intergenic 40.0%
TTTCTGTGCCGTAATGCTAA+TGG - chr1_1:56289465-56289484 Msa0030200:CDS 40.0%
ACTCACATTTATGCGCATCA+AGG + chr1_1:56289517-56289536 None:intergenic 40.0%
TTCTTCAACCAATGCCCTTA+GGG - chr1_1:56289812-56289831 Msa0030200:intron 40.0%
CTTAGGACATCTCTCTTTCA+AGG + chr1_1:56290084-56290103 None:intergenic 40.0%
ATGTCCTAAGCACTAGATGA+TGG - chr1_1:56290094-56290113 Msa0030200:intron 40.0%
GCAGTGAAAGACTTAAGAGA+CGG - chr1_1:56290126-56290145 Msa0030200:intron 40.0%
!! TTGGACATTGCCTGTTTTTC+TGG - chr1_1:56290387-56290406 Msa0030200:intron 40.0%
CAAGTATGAGGTCAAGTATG+CGG + chr1_1:56290709-56290728 None:intergenic 40.0%
CACCAAAGTGTGGCAAAATT+AGG - chr1_1:56290729-56290748 Msa0030200:intron 40.0%
! GACCTAATTTTGCCACACTT+TGG + chr1_1:56290734-56290753 None:intergenic 40.0%
!! TGTGTCCAATTTTTCTGGCA+TGG + chr1_1:56290915-56290934 None:intergenic 40.0%
AAATGACACACTTTCCCTTG+AGG - chr1_1:56291033-56291052 Msa0030200:intron 40.0%
ACAGTTTCGGAAAGACTTGA+CGG + chr1_1:56291076-56291095 None:intergenic 40.0%
! GACTCTATTGATTATCCTGG+AGG - chr1_1:56291111-56291130 Msa0030200:intron 40.0%
GAGACATGATTATATCCTCC+AGG + chr1_1:56291129-56291148 None:intergenic 40.0%
TGACAACAACATCAGTAGTC+CGG + chr1_1:56291329-56291348 None:intergenic 40.0%
!!! AGATGCCCAAACACTTTTTC+TGG + chr1_1:56291399-56291418 None:intergenic 40.0%
! ACAGCTGATTCTCCAATAAC+TGG + chr1_1:56291435-56291454 None:intergenic 40.0%
AAGCAGGGAAACCAAAAGAT+GGG + chr1_1:56291486-56291505 None:intergenic 40.0%
AAAGCAGGGAAACCAAAAGA+TGG + chr1_1:56291487-56291506 None:intergenic 40.0%
AACACATAAGTGGAGATGCA+TGG + chr1_1:56291611-56291630 None:intergenic 40.0%
TATCTGCGATTGTTCCTTGT+TGG - chr1_1:56291681-56291700 Msa0030200:intron 40.0%
GTGGAGAAATTACTGAAGGT+TGG - chr1_1:56291722-56291741 Msa0030200:intron 40.0%
CTTCTGTGCTCAACAATTTC+AGG + chr1_1:56291865-56291884 None:intergenic 40.0%
CTGAAATTGTTGAGCACAGA+AGG - chr1_1:56291863-56291882 Msa0030200:intron 40.0%
! GCGACTATTTTGCAGAACTT+TGG - chr1_1:56291979-56291998 Msa0030200:intron 40.0%
! ATTTTGCAGAACTTTGGGTG+AGG - chr1_1:56291985-56292004 Msa0030200:intron 40.0%
! TTTTGCAGAACTTTGGGTGA+GGG - chr1_1:56291986-56292005 Msa0030200:intron 40.0%
CTCAATATTGAGGAAACAGG+TGG + chr1_1:56292071-56292090 None:intergenic 40.0%
CGTCTCAATATTGAGGAAAC+AGG + chr1_1:56292074-56292093 None:intergenic 40.0%
TGTTGACCAGTCAATGTTTC+TGG - chr1_1:56292222-56292241 Msa0030200:CDS 40.0%
ACAACTCCAGAAACATTGAC+TGG + chr1_1:56292231-56292250 None:intergenic 40.0%
GAATGACCACTGCAAAGTAA+CGG - chr1_1:56292465-56292484 Msa0030200:CDS 40.0%
CAAAGTAACGGTAGTAGATG+TGG - chr1_1:56292477-56292496 Msa0030200:CDS 40.0%
TGGCTTATAATAGTGACCAG+AGG - chr1_1:56292696-56292715 Msa0030200:CDS 40.0%
TTGCATCTACAAGATGCAAG+AGG + chr1_1:56293051-56293070 None:intergenic 40.0%
CATTGTGAGGAAAGAGTTGA+AGG - chr1_1:56293096-56293115 Msa0030200:CDS 40.0%
ACTAGGACGAGAATAAAGAC+AGG + chr1_1:56293310-56293329 None:intergenic 40.0%
! ATGTCCTGGTGTCTAAAACT+AGG + chr1_1:56293327-56293346 None:intergenic 40.0%
!!! AGTTTTAGACACCAGGACAT+TGG - chr1_1:56293327-56293346 Msa0030200:intron 40.0%
TTAACGCCTAAAGGCAACAA+AGG - chr1_1:56293625-56293644 Msa0030200:CDS 40.0%
CTTGAACCTTTGTTGCCTTT+AGG + chr1_1:56293634-56293653 None:intergenic 40.0%
GATCAAGATCAAGTTCTCGT+TGG - chr1_1:56293653-56293672 Msa0030200:CDS 40.0%
!! AAGTTCTCGTTGGCTTCAAT+TGG - chr1_1:56293663-56293682 Msa0030200:CDS 40.0%
AAGAACTTTGATCAACGCAG+CGG + chr1_1:56293917-56293936 None:intergenic 40.0%
! TCAAGTTTCGACAGTGCTTT+TGG + chr1_1:56293943-56293962 None:intergenic 40.0%
TGGATTACGAAAGCTTCTTG+CGG - chr1_1:56294191-56294210 Msa0030200:intron 40.0%
! TATTTCTAACAATGGCGGCA+GGG + chr1_1:56294326-56294345 None:intergenic 40.0%
! ATATTTCTAACAATGGCGGC+AGG + chr1_1:56294327-56294346 None:intergenic 40.0%
AATATACCCAACTGCTGTTG+AGG - chr1_1:56294342-56294361 Msa0030200:intron 40.0%
TCATCTATTGTGGCATTCCA+TGG - chr1_1:56294430-56294449 Msa0030200:intron 40.0%
CATGCTCTCTGTAAGCTTTA+GGG + chr1_1:56294566-56294585 None:intergenic 40.0%
ACATGCTCTCTGTAAGCTTT+AGG + chr1_1:56294567-56294586 None:intergenic 40.0%
GTCGATGAAACTGTATCTTC+AGG - chr1_1:56294622-56294641 Msa0030200:intron 40.0%
AACTGTATCTTCAGGAAGCA+TGG - chr1_1:56294630-56294649 Msa0030200:intron 40.0%
! TATCTTCAGGAAGCATGGAT+AGG - chr1_1:56294635-56294654 Msa0030200:intron 40.0%
! ATCTTCAGGAAGCATGGATA+GGG - chr1_1:56294636-56294655 Msa0030200:intron 40.0%
GATAGGGCCATATCTTTCTA+TGG - chr1_1:56294652-56294671 Msa0030200:intron 40.0%
!! ATAAGCTTGCTGAGAACCAT+CGG - chr1_1:56294683-56294702 Msa0030200:intron 40.0%
ATTAGGCAATGACTTACCGA+TGG + chr1_1:56294702-56294721 None:intergenic 40.0%
AAGTGTTTCCTCTATGACAC+CGG - chr1_1:56295233-56295252 Msa0030200:intron 40.0%
TCACGCTAGGTATATTCATG+TGG + chr1_1:56295632-56295651 None:intergenic 40.0%
CATGAATATACCTAGCGTGA+CGG - chr1_1:56295632-56295651 Msa0030200:intron 40.0%
!! GACCTACTTGTTGTTTGCAT+CGG - chr1_1:56295663-56295682 Msa0030200:CDS 40.0%
! TGTTGTTTGCATCGGTCAAA+TGG - chr1_1:56295671-56295690 Msa0030200:CDS 40.0%
AATTATACTTCGCGGTTCAG+AGG + chr1_1:56295729-56295748 None:intergenic 40.0%
!! TATTCTAGCTCGTGTCTTCT+CGG + chr1_1:56295884-56295903 None:intergenic 40.0%
GAAGACACGAGCTAGAATAT+TGG - chr1_1:56295885-56295904 Msa0030200:intron 40.0%
CAGGAAATAGAGTCTTTGAG+TGG - chr1_1:56296045-56296064 Msa0030200:CDS 40.0%
GGAAATAGAGTCTTTGAGTG+GGG - chr1_1:56296047-56296066 Msa0030200:CDS 40.0%
AACATCATAGGTAGTCTCGA+AGG + chr1_1:56296077-56296096 None:intergenic 40.0%
ATGGCCATTTAAAGGAAAGG+TGG - chr1_1:56296162-56296181 Msa0030200:five_prime_UTR 40.0%
! CTTTTAATGATCGGCACTTG+TGG + chr1_1:56296261-56296280 None:intergenic 40.0%
AGGAAATTTCAGTTGGCGGT+TGG - chr1_1:56278281-56278300 Msa0030200:three_prime_UTR 45.0%
AACAGGAAAGAGAAGCTGCA+AGG + chr1_1:56278332-56278351 None:intergenic 45.0%
TGCGGAATCAGTAAGTGCTA+TGG + chr1_1:56278493-56278512 None:intergenic 45.0%
CTCTTATCAGCGGCTTCTTT+AGG + chr1_1:56278558-56278577 None:intergenic 45.0%
TTGAGCAGCGATGGTGTAAA+TGG + chr1_1:56278589-56278608 None:intergenic 45.0%
ATTTACACCATCGCTGCTCA+AGG - chr1_1:56278588-56278607 Msa0030200:CDS 45.0%
TGGTTGTGTTTCAGGATTGG+AGG - chr1_1:56278721-56278740 Msa0030200:intron 45.0%
CAGTCCCCAGAGTAAAGAAT+TGG - chr1_1:56278793-56278812 Msa0030200:intron 45.0%
AATGCATGTGTGTCGTGGTA+CGG + chr1_1:56279087-56279106 None:intergenic 45.0%
GAACAAATGCATGTGTGTCG+TGG + chr1_1:56279092-56279111 None:intergenic 45.0%
CAGCAATGTCTTCGTGATTG+TGG - chr1_1:56279293-56279312 Msa0030200:intron 45.0%
TGGTCTTCAGCCTGATAAGA+AGG - chr1_1:56279539-56279558 Msa0030200:CDS 45.0%
TCTTGACATGAGGGGGTAAA+AGG + chr1_1:56279689-56279708 None:intergenic 45.0%
! TGAGCTTAGCTCAGTTGGTA+GGG - chr1_1:56280090-56280109 Msa0030200:CDS 45.0%
!!! ACCTTTTTTTTGTGGTGGCC+GGG + chr1_1:56280152-56280171 None:intergenic 45.0%
!!! CCCGAACCTTTTTTTTGTGG+TGG + chr1_1:56280157-56280176 None:intergenic 45.0%
CTGCTTGCAAACTTCCCATT+AGG - chr1_1:56280440-56280459 Msa0030200:CDS 45.0%
ATAGGGAGGGAGTTGTGAAA+AGG - chr1_1:56280537-56280556 Msa0030200:CDS 45.0%
TAGGGAGGGAGTTGTGAAAA+GGG - chr1_1:56280538-56280557 Msa0030200:CDS 45.0%
! CCGTAATCAACTGGCTCAAA+AGG + chr1_1:56280584-56280603 None:intergenic 45.0%
GACAATAGTGCAACAGAAGG+TGG + chr1_1:56280795-56280814 None:intergenic 45.0%
GGTTTGATACGTTCAGTTGC+CGG - chr1_1:56280888-56280907 Msa0030200:CDS 45.0%
GTTTGATACGTTCAGTTGCC+GGG - chr1_1:56280889-56280908 Msa0030200:CDS 45.0%
TGTTGACACACTTCCAACGA+AGG - chr1_1:56281130-56281149 Msa0030200:intron 45.0%
AAAACATCCAAGGCCTTCGT+TGG + chr1_1:56281146-56281165 None:intergenic 45.0%
TGGACTCCCTAATTATCTGC+AGG - chr1_1:56281352-56281371 Msa0030200:intron 45.0%
GACTCAACATCTTCGATGTC+AGG - chr1_1:56281589-56281608 Msa0030200:intron 45.0%
AAGAACTGAGCTGTGTACAG+CGG + chr1_1:56281743-56281762 None:intergenic 45.0%
AAGTCAGTGTGTGGTACCTT+TGG + chr1_1:56282175-56282194 None:intergenic 45.0%
ATCCCCGACTGTTATCCTAT+GGG - chr1_1:56282469-56282488 Msa0030200:CDS 45.0%
TCAGCCCATAGGATAACAGT+CGG + chr1_1:56282476-56282495 None:intergenic 45.0%
! TCCACATAATCGTTGGGTTG+GGG - chr1_1:56282766-56282785 Msa0030200:intron 45.0%
! TTTGGAGGTGTACAAAGTCG+GGG - chr1_1:56282816-56282835 Msa0030200:intron 45.0%
! TCCACATAATCGTTGGGTTG+GGG - chr1_1:56282766-56282785 Msa0030200:intron 45.0%
GTACAAAGTAGGGGTGGTTA+TGG - chr1_1:56283230-56283249 Msa0030200:CDS 45.0%
ACTGTCTCAATATGGCCTCT+GGG + chr1_1:56283622-56283641 None:intergenic 45.0%
AACTGTCTCAATATGGCCTC+TGG + chr1_1:56283623-56283642 None:intergenic 45.0%
TTCTCGGAATGCACTCTTGT+TGG - chr1_1:56283994-56284013 Msa0030200:intron 45.0%
AGCTTAACTAGATTGGGCCT+TGG + chr1_1:56284540-56284559 None:intergenic 45.0%
GGCAGGCCCAGTATATATTT+AGG + chr1_1:56284748-56284767 None:intergenic 45.0%
TGTGGCATAGCAAGGAGTAA+TGG + chr1_1:56284924-56284943 None:intergenic 45.0%
! ATTACTCCTTGCTATGCCAC+AGG - chr1_1:56284923-56284942 Msa0030200:intron 45.0%
TTTCAACCTGTGGCATAGCA+AGG + chr1_1:56284932-56284951 None:intergenic 45.0%
GATACTTGTGGTACTAGACG+GGG + chr1_1:56285455-56285474 None:intergenic 45.0%
! TTCCTATTCTGAAGGCTGAG+TGG - chr1_1:56285927-56285946 Msa0030200:CDS 45.0%
! TCCTATTCTGAAGGCTGAGT+GGG - chr1_1:56285928-56285947 Msa0030200:CDS 45.0%
TGGGAATCTTCAGTGAATGC+TGG - chr1_1:56285947-56285966 Msa0030200:intron 45.0%
!! TGGTGATGTTCTTTTGGACG+AGG - chr1_1:56285967-56285986 Msa0030200:intron 45.0%
! TGTTCTTTTGGACGAGGTAC+GGG - chr1_1:56285973-56285992 Msa0030200:intron 45.0%
! TACGGGGATTTGGTCTCATA+TGG - chr1_1:56285990-56286009 Msa0030200:intron 45.0%
TGCATTTAGAGGTCCGAGTT+TGG + chr1_1:56286153-56286172 None:intergenic 45.0%
! ACTGTGCTGCTAAGAAATGG+AGG + chr1_1:56286622-56286641 None:intergenic 45.0%
ATGGAGTACATCAAGCAACG+GGG + chr1_1:56286703-56286722 None:intergenic 45.0%
CTTTCAACTTGGACTACAGC+AGG + chr1_1:56286983-56287002 None:intergenic 45.0%
! AGCACTGGAGACTTTCAACT+TGG + chr1_1:56286994-56287013 None:intergenic 45.0%
GTTGAAAGTCTCCAGTGCTA+TGG - chr1_1:56286995-56287014 Msa0030200:CDS 45.0%
GCCAATGGAACAAGAAGAGA+AGG + chr1_1:56287076-56287095 None:intergenic 45.0%
TCTCTTCTTGTTCCATTGGC+CGG - chr1_1:56287076-56287095 Msa0030200:CDS 45.0%
GTTAAGTTACACGCTTTGCG+GGG - chr1_1:56287322-56287341 Msa0030200:intron 45.0%
TACAACAGGGTTCCAGTTTC+TGG - chr1_1:56287439-56287458 Msa0030200:intron 45.0%
TGTGTAGAGGGGAATTTGGA+TGG - chr1_1:56287725-56287744 Msa0030200:intron 45.0%
GTGTAGAGGGGAATTTGGAT+GGG - chr1_1:56287726-56287745 Msa0030200:intron 45.0%
CTGGGAAATTCTCCAACTAC+GGG - chr1_1:56288432-56288451 Msa0030200:CDS 45.0%
GAAATTCTCCAACTACGGGA+AGG - chr1_1:56288436-56288455 Msa0030200:CDS 45.0%
CTTTCCTTGCTCAAGGGAAT+TGG - chr1_1:56288648-56288667 Msa0030200:CDS 45.0%
TAGCTCACCAAACCTCAGAT+TGG + chr1_1:56288834-56288853 None:intergenic 45.0%
GTAATGTCTTCTCCTTCAGG+TGG - chr1_1:56288879-56288898 Msa0030200:CDS 45.0%
TGAAGATCATCTCCACCTGA+AGG + chr1_1:56288894-56288913 None:intergenic 45.0%
ACTGGAAAAGGCAATGACCA+AGG + chr1_1:56289006-56289025 None:intergenic 45.0%
! TGGTCATTGCCTTTTCCAGT+TGG - chr1_1:56289006-56289025 Msa0030200:CDS 45.0%
! CATTGCCTTTTCCAGTTGGA+TGG - chr1_1:56289010-56289029 Msa0030200:CDS 45.0%
TCATGCCATCCAACTGGAAA+AGG + chr1_1:56289018-56289037 None:intergenic 45.0%
TGCAAGGCTCTACATAAGCA+GGG + chr1_1:56289051-56289070 None:intergenic 45.0%
ATGCAAGGCTCTACATAAGC+AGG + chr1_1:56289052-56289071 None:intergenic 45.0%
!! ATACAAAACAGGCACCGAAG+AGG + chr1_1:56289605-56289624 None:intergenic 45.0%
GTTCTTCAACCAATGCCCTT+AGG - chr1_1:56289811-56289830 Msa0030200:intron 45.0%
! TACGTCGATTGTCACCCTAA+GGG + chr1_1:56289829-56289848 None:intergenic 45.0%
!! CTCTAGAGCTTGCTCATGAA+GGG - chr1_1:56289925-56289944 Msa0030200:intron 45.0%
TCTCTCTTTCAAGGAGGCAA+CGG + chr1_1:56290075-56290094 None:intergenic 45.0%
AGGACATCTCTCTTTCAAGG+AGG + chr1_1:56290081-56290100 None:intergenic 45.0%
! TCCTAAGCACTAGATGATGG+AGG - chr1_1:56290097-56290116 Msa0030200:intron 45.0%
!! CACTAGATGATGGAGGCATA+TGG - chr1_1:56290104-56290123 Msa0030200:intron 45.0%
TTCGTAGAGGAAGTCTGAGA+TGG - chr1_1:56290200-56290219 Msa0030200:intron 45.0%
! CACACTTTGGTGCAAGTATG+AGG + chr1_1:56290721-56290740 None:intergenic 45.0%
CTCATACTTGCACCAAAGTG+TGG - chr1_1:56290719-56290738 Msa0030200:intron 45.0%
! AATTGCCGCTTGATTCTTGC+AGG - chr1_1:56290951-56290970 Msa0030200:CDS 45.0%
GAATGCCTGCAAGAATCAAG+CGG + chr1_1:56290959-56290978 None:intergenic 45.0%
TTGGGATGATCCTTCCTCAA+GGG + chr1_1:56291050-56291069 None:intergenic 45.0%
AGCTACTGATAGAGTTTGCC+CGG - chr1_1:56291307-56291326 Msa0030200:intron 45.0%
GACAACAACATCAGTAGTCC+GGG + chr1_1:56291328-56291347 None:intergenic 45.0%
AGCAGGGAAACCAAAAGATG+GGG + chr1_1:56291485-56291504 None:intergenic 45.0%
GGACCCAAGCATGAAAATCA+AGG + chr1_1:56291518-56291537 None:intergenic 45.0%
TCTGTCTTAGACAGCCAACA+AGG + chr1_1:56291698-56291717 None:intergenic 45.0%
! GCTGTCTAAGACAGATGATG+TGG - chr1_1:56291703-56291722 Msa0030200:intron 45.0%
TCATGTCTCTCCTACATGAG+TGG - chr1_1:56291770-56291789 Msa0030200:intron 45.0%
GGGTGAGGGTAAAAAATGCT+TGG - chr1_1:56292000-56292019 Msa0030200:intron 45.0%
GGTGGCTTTCCTTGAAACTA+AGG + chr1_1:56292053-56292072 None:intergenic 45.0%
CATCTGGCGTCTCAATATTG+AGG + chr1_1:56292081-56292100 None:intergenic 45.0%
AGAAGGCTCTCTTGTCATTC+AGG - chr1_1:56292318-56292337 Msa0030200:intron 45.0%
! CTACTACCGTTACTTTGCAG+TGG + chr1_1:56292474-56292493 None:intergenic 45.0%
GGTGAAATTGTTACACCCTC+CGG - chr1_1:56292562-56292581 Msa0030200:intron 45.0%
TGCTTACAATAGTGACCGGA+GGG + chr1_1:56292580-56292599 None:intergenic 45.0%
TTGCTTACAATAGTGACCGG+AGG + chr1_1:56292581-56292600 None:intergenic 45.0%
CTTGCTAAAAGCTACACCTC+TGG + chr1_1:56292715-56292734 None:intergenic 45.0%
!! CAGAGGTGTAGCTTTTAGCA+AGG - chr1_1:56292713-56292732 Msa0030200:intron 45.0%
!!! TCGTCCTAGTTTTAGACACC+AGG - chr1_1:56293320-56293339 Msa0030200:intron 45.0%
GACACCAGGACATTGGATTT+AGG - chr1_1:56293334-56293353 Msa0030200:intron 45.0%
ACAGTCAGCTTAACGCCTAA+AGG - chr1_1:56293616-56293635 Msa0030200:CDS 45.0%
!! TGAAACTGCTGCCACTTTCA+AGG + chr1_1:56293767-56293786 None:intergenic 45.0%
ACGAAGGTGGAACTATTCGA+AGG + chr1_1:56293817-56293836 None:intergenic 45.0%
AGATTCAAGGCATGCAACGA+AGG + chr1_1:56293833-56293852 None:intergenic 45.0%
TCGAAGGCAACTAGAAGTCA+CGG + chr1_1:56293890-56293909 None:intergenic 45.0%
! GCTGCGTTGATCAAAGTTCT+TGG - chr1_1:56293916-56293935 Msa0030200:intron 45.0%
GACCGTGATAAAGTCCTCTA+AGG - chr1_1:56293972-56293991 Msa0030200:intron 45.0%
AACAAGATGGGGTGCATTTG+AGG + chr1_1:56294031-56294050 None:intergenic 45.0%
GAGGCAGTTGTTGTCAAACT+TGG - chr1_1:56294069-56294088 Msa0030200:intron 45.0%
GCAGTTGTTGTCAAACTTGG+TGG - chr1_1:56294072-56294091 Msa0030200:intron 45.0%
CTTCGTCCAGAATTTGTCTC+AGG - chr1_1:56294138-56294157 Msa0030200:intron 45.0%
CTCAGGAATAGATGCCAAAG+TGG - chr1_1:56294155-56294174 Msa0030200:intron 45.0%
CTTTCGTAATCCATGAGCAC+GGG + chr1_1:56294184-56294203 None:intergenic 45.0%
GCTTTCGTAATCCATGAGCA+CGG + chr1_1:56294185-56294204 None:intergenic 45.0%
CTATTGTGGCATTCCATGGA+AGG - chr1_1:56294434-56294453 Msa0030200:intron 45.0%
GGCCATATCTTTCTATGGCA+TGG - chr1_1:56294657-56294676 Msa0030200:intron 45.0%
TGTGTTCATCATCTTGGCGA+TGG - chr1_1:56295074-56295093 Msa0030200:CDS 45.0%
! AAGGCTAAGATTTTGGGCGA+CGG - chr1_1:56295137-56295156 Msa0030200:CDS 45.0%
ATATCTTGTCTGTCAAGGGC+TGG - chr1_1:56295177-56295196 Msa0030200:intron 45.0%
AGTGTTTCCTCTATGACACC+GGG - chr1_1:56295234-56295253 Msa0030200:intron 45.0%
GTCAAGAAACTTTGAGCTCC+CGG + chr1_1:56295255-56295274 None:intergenic 45.0%
GACAAGCAAAATCACTGCTG+AGG + chr1_1:56295512-56295531 None:intergenic 45.0%
ATTCATGTGGTCATCCAACG+AGG + chr1_1:56295619-56295638 None:intergenic 45.0%
TCATCAAATTCCGTCACGCT+AGG + chr1_1:56295645-56295664 None:intergenic 45.0%
GACCGATGCAAACAACAAGT+AGG + chr1_1:56295668-56295687 None:intergenic 45.0%
! TGTTTGCATCGGTCAAATGG+CGG - chr1_1:56295674-56295693 Msa0030200:CDS 45.0%
TCAAGCAGTTCAACGAGGAT+GGG + chr1_1:56295982-56296001 None:intergenic 45.0%
TCTTGCACAGGAAATTCTGC+AGG - chr1_1:56296026-56296045 Msa0030200:CDS 45.0%
!! AACTTATTATATAATATATT+TGG - chr1_1:56279589-56279608 Msa0030200:intron 5.0%
!! ACTTATTATATAATATATTT+GGG - chr1_1:56279590-56279609 Msa0030200:intron 5.0%
!! TTGATATAAAATAATAAAAT+TGG + chr1_1:56284149-56284168 None:intergenic 5.0%
!!! TAGATTTTTTTTTTTTTTTT+TGG - chr1_1:56294814-56294833 Msa0030200:intron 5.0%
!! AAAATGAATATTTATTTATA+AGG + chr1_1:56295479-56295498 None:intergenic 5.0%
CTGCAAGGCAGTAGGGTTTA+GGG + chr1_1:56278317-56278336 None:intergenic 50.0%
AGAGAAGCTGCAAGGCAGTA+GGG + chr1_1:56278324-56278343 None:intergenic 50.0%
AAGAGAAGCTGCAAGGCAGT+AGG + chr1_1:56278325-56278344 None:intergenic 50.0%
TACAGAGCGCGGTTGAAAAC+AGG + chr1_1:56278349-56278368 None:intergenic 50.0%
!! CTTCGTTTTGGTACAGAGCG+CGG + chr1_1:56278360-56278379 None:intergenic 50.0%
GAAGTTACCTTGAGCAGCGA+TGG + chr1_1:56278598-56278617 None:intergenic 50.0%
GGGTGCAACACTACCTAGAA+TGG - chr1_1:56279262-56279281 Msa0030200:intron 50.0%
CTCAGGCATATCCAGCTATG+TGG + chr1_1:56279929-56279948 None:intergenic 50.0%
CATAGCTGGATATGCCTGAG+TGG - chr1_1:56279929-56279948 Msa0030200:CDS 50.0%
GTGAGCTTAGCTCAGTTGGT+AGG - chr1_1:56280089-56280108 Msa0030200:CDS 50.0%
!!! CCTTTTTTTTGTGGTGGCCG+GGG + chr1_1:56280151-56280170 None:intergenic 50.0%
AGGGAGGGAGTTGTGAAAAG+GGG - chr1_1:56280539-56280558 Msa0030200:CDS 50.0%
TAAGGATGAAGACTGCCAGC+AGG - chr1_1:56281465-56281484 Msa0030200:CDS 50.0%
GCTGTACACAGCTCAGTTCT+TGG - chr1_1:56281742-56281761 Msa0030200:intron 50.0%
!!! CGTACAGTTTTGGGAGGAGA+GGG + chr1_1:56282405-56282424 None:intergenic 50.0%
!!! ACGTACAGTTTTGGGAGGAG+AGG + chr1_1:56282406-56282425 None:intergenic 50.0%
CATAGGATAACAGTCGGGGA+TGG + chr1_1:56282470-56282489 None:intergenic 50.0%
CATCCCCGACTGTTATCCTA+TGG - chr1_1:56282468-56282487 Msa0030200:CDS 50.0%
AGCCCATAGGATAACAGTCG+GGG + chr1_1:56282474-56282493 None:intergenic 50.0%
CAGCCCATAGGATAACAGTC+GGG + chr1_1:56282475-56282494 None:intergenic 50.0%
!! CCACATAATCGTTGGGTTGG+GGG - chr1_1:56282767-56282786 Msa0030200:intron 50.0%
! TTGGAGGTGTACAAAGTCGG+GGG - chr1_1:56282817-56282836 Msa0030200:intron 50.0%
GTGTACAAAGTCGGGGGTTA+TGG - chr1_1:56282823-56282842 Msa0030200:intron 50.0%
!! CCACATAATCGTTGGGTTGG+GGG - chr1_1:56282767-56282786 Msa0030200:intron 50.0%
TGTGGTGTACAAAGTAGGGG+TGG - chr1_1:56283224-56283243 Msa0030200:CDS 50.0%
!! GGGTCTTATTGACATCCCAG+AGG - chr1_1:56283604-56283623 Msa0030200:CDS 50.0%
AAGCTGCTGTCTGGTAAGTG+TGG - chr1_1:56283761-56283780 Msa0030200:CDS 50.0%
GACTGTAGGAATGGCCGAAT+AGG - chr1_1:56285428-56285447 Msa0030200:intron 50.0%
GTACTAGACGGGGTCCTATT+CGG + chr1_1:56285445-56285464 None:intergenic 50.0%
CAATCGCAGACATCGATACC+TGG - chr1_1:56285558-56285577 Msa0030200:intron 50.0%
TCCCACTCAGCCTTCAGAAT+AGG + chr1_1:56285932-56285951 None:intergenic 50.0%
! GTTCTTTTGGACGAGGTACG+GGG - chr1_1:56285974-56285993 Msa0030200:intron 50.0%
AACAAACAGTGCACAGAGGG+AGG + chr1_1:56286492-56286511 None:intergenic 50.0%
GGCAACAAACAGTGCACAGA+GGG + chr1_1:56286495-56286514 None:intergenic 50.0%
AGGCAACAAACAGTGCACAG+AGG + chr1_1:56286496-56286515 None:intergenic 50.0%
TACAGCAGGAACACCTACAC+AGG + chr1_1:56286969-56286988 None:intergenic 50.0%
GACTCGTACCTGATCATCAC+CGG + chr1_1:56287098-56287117 None:intergenic 50.0%
GTCTGTAAGGGTTGCTTCCA+TGG - chr1_1:56287291-56287310 Msa0030200:intron 50.0%
ATGCCCAATTCCCTTGAGCA+AGG + chr1_1:56288655-56288674 None:intergenic 50.0%
CTGAAGTCATGCCATCCAAC+TGG + chr1_1:56289024-56289043 None:intergenic 50.0%
TCAATTCTACACGGGGTTGC+AGG - chr1_1:56289096-56289115 Msa0030200:intron 50.0%
GGGGTTGCAGGATAAAGCAA+AGG - chr1_1:56289108-56289127 Msa0030200:intron 50.0%
GGCACAGAAACACAAGTGCA+AGG + chr1_1:56289455-56289474 None:intergenic 50.0%
! GATTGTCACCCTAAGGGCAT+TGG + chr1_1:56289823-56289842 None:intergenic 50.0%
! CTACGTCGATTGTCACCCTA+AGG + chr1_1:56289830-56289849 None:intergenic 50.0%
! CCTTCATGAGCAAGCTCTAG+AGG + chr1_1:56289927-56289946 None:intergenic 50.0%
!! CCTCTAGAGCTTGCTCATGA+AGG - chr1_1:56289924-56289943 Msa0030200:intron 50.0%
TGTTCTCATGGCACTGCTTG+GGG + chr1_1:56289951-56289970 None:intergenic 50.0%
GTGTTCTCATGGCACTGCTT+GGG + chr1_1:56289952-56289971 None:intergenic 50.0%
! TGGGGGTAGGGTACTAGAAA+AGG + chr1_1:56290037-56290056 None:intergenic 50.0%
!! TTTTCTAGTACCCTACCCCC+AGG - chr1_1:56290036-56290055 Msa0030200:intron 50.0%
! TTTCTAGTACCCTACCCCCA+GGG - chr1_1:56290037-56290056 Msa0030200:intron 50.0%
TCTCTTTCAAGGAGGCAACG+GGG + chr1_1:56290073-56290092 None:intergenic 50.0%
CTCTCTTTCAAGGAGGCAAC+GGG + chr1_1:56290074-56290093 None:intergenic 50.0%
GCCTCCATCATCTAGTGCTT+AGG + chr1_1:56290101-56290120 None:intergenic 50.0%
! AGAGGAAGTCTGAGATGGCT+TGG - chr1_1:56290205-56290224 Msa0030200:intron 50.0%
GACACACTTTCCCTTGAGGA+AGG - chr1_1:56291037-56291056 Msa0030200:intron 50.0%
GTTGGGATGATCCTTCCTCA+AGG + chr1_1:56291051-56291070 None:intergenic 50.0%
GTTTCGGAAAGACTTGACGG+CGG + chr1_1:56291073-56291092 None:intergenic 50.0%
TGGAGAATCAGCTGTCACAC+AGG - chr1_1:56291440-56291459 Msa0030200:intron 50.0%
! GATCTCGCTACCCCATCTTT+TGG - chr1_1:56291472-56291491 Msa0030200:intron 50.0%
GAGTCAACTCGGAGAGCTTA+TGG - chr1_1:56293012-56293031 Msa0030200:CDS 50.0%
AAACTATGCGCGCTGTTGTG+AGG - chr1_1:56293119-56293138 Msa0030200:intron 50.0%
TACCTCATCACGTGTACTCC+AGG - chr1_1:56293555-56293574 Msa0030200:intron 50.0%
TTCAAGGCATGCAACGAAGG+TGG + chr1_1:56293830-56293849 None:intergenic 50.0%
ATGAGCACGGGATTCCACTT+TGG + chr1_1:56294172-56294191 None:intergenic 50.0%
AAAGTGGAATCCCGTGCTCA+TGG - chr1_1:56294171-56294190 Msa0030200:intron 50.0%
GTTCATCATCTTGGCGATGG+CGG - chr1_1:56295077-56295096 Msa0030200:CDS 50.0%
GGTTCAGAGGTTGCCACAAA+AGG + chr1_1:56295716-56295735 None:intergenic 50.0%
CTCAAGCAGTTCAACGAGGA+TGG + chr1_1:56295983-56296002 None:intergenic 50.0%
CATCCTCGTTGAACTGCTTG+AGG - chr1_1:56295981-56296000 Msa0030200:intron 50.0%
CATCCTCAAGCAGTTCAACG+AGG + chr1_1:56295987-56296006 None:intergenic 50.0%
CGTTGAACTGCTTGAGGATG+TGG - chr1_1:56295987-56296006 Msa0030200:intron 50.0%
GCTGCAAGGCAGTAGGGTTT+AGG + chr1_1:56278318-56278337 None:intergenic 55.0%
!!! GAACGGTCGCTTTTGAGGTG+CGG + chr1_1:56278511-56278530 None:intergenic 55.0%
!!! CGAGTGAACGGTCGCTTTTG+AGG + chr1_1:56278516-56278535 None:intergenic 55.0%
! TCGAGCGTTTGAAGTGCAGC+CGG + chr1_1:56278908-56278927 None:intergenic 55.0%
CCAACTGAGCTAAGCTCACG+AGG + chr1_1:56280088-56280107 None:intergenic 55.0%
CCTCGTGAGCTTAGCTCAGT+TGG - chr1_1:56280085-56280104 Msa0030200:CDS 55.0%
CCCCGGCCACCACAAAAAAA+AGG - chr1_1:56280148-56280167 Msa0030200:CDS 55.0%
GAGCCAGTTGATTACGGGGA+CGG - chr1_1:56280587-56280606 Msa0030200:CDS 55.0%
CTCACAAGCACGAGCAATCC+CGG + chr1_1:56280910-56280929 None:intergenic 55.0%
GATTGCTCGTGCTTGTGAGG+AGG - chr1_1:56280911-56280930 Msa0030200:CDS 55.0%
CACACTTCCAACGAAGGCCT+TGG - chr1_1:56281136-56281155 Msa0030200:intron 55.0%
TCAAGGACAGCAAAGCCTGC+TGG + chr1_1:56281483-56281502 None:intergenic 55.0%
ACTGCTGCACGGAGTTCAGA+AGG + chr1_1:56281922-56281941 None:intergenic 55.0%
CCCCCAACCCAACGATTATG+TGG + chr1_1:56282770-56282789 None:intergenic 55.0%
CCCCCAACCCAACGATTATG+TGG + chr1_1:56282770-56282789 None:intergenic 55.0%
! TGTGTTGGCAAGCTGCTGTC+TGG - chr1_1:56283752-56283771 Msa0030200:CDS 55.0%
TCACCAATCGTATGCAGGGC+AGG + chr1_1:56284765-56284784 None:intergenic 55.0%
TTGGACGAGGTACGGGGATT+TGG - chr1_1:56285980-56285999 Msa0030200:intron 55.0%
TCCATTGGCCGGTGATGATC+AGG - chr1_1:56287087-56287106 Msa0030200:CDS 55.0%
ACCTGATCATCACCGGCCAA+TGG + chr1_1:56287091-56287110 None:intergenic 55.0%
TTGCGGGGTCGCATTGAACA+TGG - chr1_1:56287337-56287356 Msa0030200:intron 55.0%
AGCGTTGTTCACGTCCTCAC+TGG - chr1_1:56287526-56287545 Msa0030200:CDS 55.0%
GCGTTGTTCACGTCCTCACT+GGG - chr1_1:56287527-56287546 Msa0030200:CDS 55.0%
CGTTGTTCACGTCCTCACTG+GGG - chr1_1:56287528-56287547 Msa0030200:CDS 55.0%
GCGTCAAACCTTCCCGTAGT+TGG + chr1_1:56288447-56288466 None:intergenic 55.0%
GGTGTTCTCATGGCACTGCT+TGG + chr1_1:56289953-56289972 None:intergenic 55.0%
AGTGCCATGAGAACACCGCT+CGG - chr1_1:56289956-56289975 Msa0030200:intron 55.0%
!! TTTCTGGGTTGATGCCCGAG+CGG + chr1_1:56289974-56289993 None:intergenic 55.0%
TTCTAGTACCCTACCCCCAG+GGG - chr1_1:56290038-56290057 Msa0030200:intron 55.0%
GGAAAGACTTGACGGCGGTT+GGG + chr1_1:56291068-56291087 None:intergenic 55.0%
AGCCTGGAGTACACGTGATG+AGG + chr1_1:56293560-56293579 None:intergenic 55.0%
TCACGTGTACTCCAGGCTCT+TGG - chr1_1:56293562-56293581 Msa0030200:intron 55.0%
CACGTGTACTCCAGGCTCTT+GGG - chr1_1:56293563-56293582 Msa0030200:intron 55.0%
CACATAACAGCCCAAGAGCC+TGG + chr1_1:56293576-56293595 None:intergenic 55.0%
AGTGGCAGCAGTTTCAGCGT+TGG - chr1_1:56293771-56293790 Msa0030200:intron 55.0%
TCAACGCAGCGGAAGTTCGA+AGG + chr1_1:56293906-56293925 None:intergenic 55.0%
! ATGGGGTGCATTTGAGGCTG+GGG + chr1_1:56294025-56294044 None:intergenic 55.0%
! GATGGGGTGCATTTGAGGCT+GGG + chr1_1:56294026-56294045 None:intergenic 55.0%
! AGATGGGGTGCATTTGAGGC+TGG + chr1_1:56294027-56294046 None:intergenic 55.0%
TACCCAACTGCTGTTGAGGC+TGG - chr1_1:56294346-56294365 Msa0030200:intron 55.0%
ACCCAACTGCTGTTGAGGCT+GGG - chr1_1:56294347-56294366 Msa0030200:intron 55.0%
!! TTGAGCTCCCGGTGTCATAG+AGG + chr1_1:56295244-56295263 None:intergenic 55.0%
ATGTGGTCATCCAACGAGGC+AGG + chr1_1:56295615-56295634 None:intergenic 55.0%
!! CAGCTGGCTCAGACCTTTTG+TGG - chr1_1:56295700-56295719 Msa0030200:CDS 55.0%
AAGGTTCGGGGTTCGATCCC+CGG - chr1_1:56280167-56280186 Msa0030200:CDS 60.0%
GGTCCGTCCCCGTAATCAAC+TGG + chr1_1:56280593-56280612 None:intergenic 60.0%
GTTGATTACGGGGACGGACC+TGG - chr1_1:56280593-56280612 Msa0030200:CDS 60.0%
CGGGATTGCTCGTGCTTGTG+AGG - chr1_1:56280908-56280927 Msa0030200:CDS 60.0%
ATGATAGGACGAGCCCGGTG+TGG + chr1_1:56287555-56287574 None:intergenic 60.0%
GTGCCATGAGAACACCGCTC+GGG - chr1_1:56289957-56289976 Msa0030200:intron 60.0%
ATGCCCGAGCGGTGTTCTCA+TGG + chr1_1:56289963-56289982 None:intergenic 60.0%
TTCGACTTCCCCTGGGGGTA+GGG + chr1_1:56290049-56290068 None:intergenic 60.0%
ATTCGACTTCCCCTGGGGGT+AGG + chr1_1:56290050-56290069 None:intergenic 60.0%
ACGGGGATTCGACTTCCCCT+GGG + chr1_1:56290056-56290075 None:intergenic 60.0%
AACGGGGATTCGACTTCCCC+TGG + chr1_1:56290057-56290076 None:intergenic 60.0%
TGGCAGGCGCAGTTGACAGA+AGG + chr1_1:56290451-56290470 None:intergenic 60.0%
CGGAAAGACTTGACGGCGGT+TGG + chr1_1:56291069-56291088 None:intergenic 60.0%
CCCCAGCCTCAACAGCAGTT+GGG + chr1_1:56294351-56294370 None:intergenic 60.0%
CCCAACTGCTGTTGAGGCTG+GGG - chr1_1:56294348-56294367 Msa0030200:intron 60.0%
TCCCCAGCCTCAACAGCAGT+TGG + chr1_1:56294352-56294371 None:intergenic 60.0%
! CTGTCAAGGGCTGGCATCTC+AGG - chr1_1:56295186-56295205 Msa0030200:intron 60.0%
! TCTAGAGCCACCTGCCTCGT+TGG - chr1_1:56295602-56295621 Msa0030200:intron 60.0%
TGGTCATCCAACGAGGCAGG+TGG + chr1_1:56295612-56295631 None:intergenic 60.0%
GGTCAAATGGCGGTCACAGC+TGG - chr1_1:56295684-56295703 Msa0030200:CDS 60.0%
AAGGTCCGGGGTTCGATCCC+CGG - chr1_1:56280131-56280150 Msa0030200:CDS 65.0%
GGGCCTGCCCTGCATACGAT+TGG - chr1_1:56284759-56284778 Msa0030200:intron 65.0%
GTCCTCACTGGGGTCCACAC+CGG - chr1_1:56287538-56287557 Msa0030200:CDS 65.0%
TCCTCACTGGGGTCCACACC+GGG - chr1_1:56287539-56287558 Msa0030200:CDS 65.0%
GGGGATTCGACTTCCCCTGG+GGG + chr1_1:56290054-56290073 None:intergenic 65.0%
CGGGGATTCGACTTCCCCTG+GGG + chr1_1:56290055-56290074 None:intergenic 65.0%
GGTGGCCGGGGATCGAACCC+CGG + chr1_1:56280139-56280158 None:intergenic 75.0%
GCCCGGTGTGGACCCCAGTG+AGG + chr1_1:56287543-56287562 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 56278276 56296322 56278276 ID=Msa0030200;Name=Msa0030200
chr1_1 mRNA 56278276 56296322 56278276 ID=Msa0030200-mRNA-1;Parent=Msa0030200;Name=Msa0030200-mRNA-1;_AED=0.09;_eAED=0.09;_QI=174|0.94|0.94|1|1|1|39|230|2070
chr1_1 exon 56278276 56278739 56278276 ID=Msa0030200-mRNA-1:exon:16862;Parent=Msa0030200-mRNA-1
chr1_1 exon 56278858 56279028 56278858 ID=Msa0030200-mRNA-1:exon:16861;Parent=Msa0030200-mRNA-1
chr1_1 exon 56279384 56279564 56279384 ID=Msa0030200-mRNA-1:exon:16860;Parent=Msa0030200-mRNA-1
chr1_1 exon 56279894 56280285 56279894 ID=Msa0030200-mRNA-1:exon:16859;Parent=Msa0030200-mRNA-1
chr1_1 exon 56280374 56281021 56280374 ID=Msa0030200-mRNA-1:exon:16858;Parent=Msa0030200-mRNA-1
chr1_1 exon 56281370 56281585 56281370 ID=Msa0030200-mRNA-1:exon:16857;Parent=Msa0030200-mRNA-1
chr1_1 exon 56282259 56282604 56282259 ID=Msa0030200-mRNA-1:exon:16856;Parent=Msa0030200-mRNA-1
chr1_1 exon 56282687 56282754 56282687 ID=Msa0030200-mRNA-1:exon:16855;Parent=Msa0030200-mRNA-1
chr1_1 exon 56282859 56282954 56282859 ID=Msa0030200-mRNA-1:exon:16854;Parent=Msa0030200-mRNA-1
chr1_1 exon 56283137 56283319 56283137 ID=Msa0030200-mRNA-1:exon:16853;Parent=Msa0030200-mRNA-1
chr1_1 exon 56283427 56283625 56283427 ID=Msa0030200-mRNA-1:exon:16852;Parent=Msa0030200-mRNA-1
chr1_1 exon 56283710 56283912 56283710 ID=Msa0030200-mRNA-1:exon:16851;Parent=Msa0030200-mRNA-1
chr1_1 exon 56285068 56285157 56285068 ID=Msa0030200-mRNA-1:exon:16850;Parent=Msa0030200-mRNA-1
chr1_1 exon 56285469 56285573 56285469 ID=Msa0030200-mRNA-1:exon:16849;Parent=Msa0030200-mRNA-1
chr1_1 exon 56285660 56285725 56285660 ID=Msa0030200-mRNA-1:exon:16848;Parent=Msa0030200-mRNA-1
chr1_1 exon 56285810 56285959 56285810 ID=Msa0030200-mRNA-1:exon:16847;Parent=Msa0030200-mRNA-1
chr1_1 exon 56286141 56286210 56286141 ID=Msa0030200-mRNA-1:exon:16846;Parent=Msa0030200-mRNA-1
chr1_1 exon 56286992 56287151 56286992 ID=Msa0030200-mRNA-1:exon:16845;Parent=Msa0030200-mRNA-1
chr1_1 exon 56287240 56287306 56287240 ID=Msa0030200-mRNA-1:exon:16844;Parent=Msa0030200-mRNA-1
chr1_1 exon 56287490 56287623 56287490 ID=Msa0030200-mRNA-1:exon:16843;Parent=Msa0030200-mRNA-1
chr1_1 exon 56287915 56288050 56287915 ID=Msa0030200-mRNA-1:exon:16842;Parent=Msa0030200-mRNA-1
chr1_1 exon 56288354 56288512 56288354 ID=Msa0030200-mRNA-1:exon:16841;Parent=Msa0030200-mRNA-1
chr1_1 exon 56288610 56288707 56288610 ID=Msa0030200-mRNA-1:exon:16840;Parent=Msa0030200-mRNA-1
chr1_1 exon 56288848 56289031 56288848 ID=Msa0030200-mRNA-1:exon:16839;Parent=Msa0030200-mRNA-1
chr1_1 exon 56289457 56289537 56289457 ID=Msa0030200-mRNA-1:exon:16838;Parent=Msa0030200-mRNA-1
chr1_1 exon 56289654 56289754 56289654 ID=Msa0030200-mRNA-1:exon:16837;Parent=Msa0030200-mRNA-1
chr1_1 exon 56290825 56290993 56290825 ID=Msa0030200-mRNA-1:exon:16836;Parent=Msa0030200-mRNA-1
chr1_1 exon 56292220 56292294 56292220 ID=Msa0030200-mRNA-1:exon:16835;Parent=Msa0030200-mRNA-1
chr1_1 exon 56292421 56292552 56292421 ID=Msa0030200-mRNA-1:exon:16834;Parent=Msa0030200-mRNA-1
chr1_1 exon 56292641 56292723 56292641 ID=Msa0030200-mRNA-1:exon:16833;Parent=Msa0030200-mRNA-1
chr1_1 exon 56292988 56293136 56292988 ID=Msa0030200-mRNA-1:exon:16832;Parent=Msa0030200-mRNA-1
chr1_1 exon 56293225 56293314 56293225 ID=Msa0030200-mRNA-1:exon:16831;Parent=Msa0030200-mRNA-1
chr1_1 exon 56293421 56293476 56293421 ID=Msa0030200-mRNA-1:exon:16830;Parent=Msa0030200-mRNA-1
chr1_1 exon 56293609 56293776 56293609 ID=Msa0030200-mRNA-1:exon:16829;Parent=Msa0030200-mRNA-1
chr1_1 exon 56295020 56295181 56295020 ID=Msa0030200-mRNA-1:exon:16828;Parent=Msa0030200-mRNA-1
chr1_1 exon 56295255 56295375 56295255 ID=Msa0030200-mRNA-1:exon:16827;Parent=Msa0030200-mRNA-1
chr1_1 exon 56295462 56295557 56295462 ID=Msa0030200-mRNA-1:exon:16826;Parent=Msa0030200-mRNA-1
chr1_1 exon 56295650 56295863 56295650 ID=Msa0030200-mRNA-1:exon:16825;Parent=Msa0030200-mRNA-1
chr1_1 exon 56295989 56296322 56295989 ID=Msa0030200-mRNA-1:exon:16824;Parent=Msa0030200-mRNA-1
chr1_1 five_prime_UTR 56296149 56296322 56296149 ID=Msa0030200-mRNA-1:five_prime_utr;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56295989 56296148 56295989 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56295650 56295863 56295650 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56295462 56295557 56295462 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56295255 56295375 56295255 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56295020 56295181 56295020 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56293609 56293776 56293609 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56293421 56293476 56293421 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56293225 56293314 56293225 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56292988 56293136 56292988 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56292641 56292723 56292641 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56292421 56292552 56292421 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56292220 56292294 56292220 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56290825 56290993 56290825 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56289654 56289754 56289654 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56289457 56289537 56289457 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56288848 56289031 56288848 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56288610 56288707 56288610 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56288354 56288512 56288354 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56287915 56288050 56287915 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56287490 56287623 56287490 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56287240 56287306 56287240 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56286992 56287151 56286992 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56286141 56286210 56286141 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56285810 56285959 56285810 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56285660 56285725 56285660 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56285469 56285573 56285469 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56285068 56285157 56285068 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56283710 56283912 56283710 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56283427 56283625 56283427 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56283137 56283319 56283137 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56282859 56282954 56282859 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56282687 56282754 56282687 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56282259 56282604 56282259 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56281370 56281585 56281370 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56280374 56281021 56280374 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56279894 56280285 56279894 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56279384 56279564 56279384 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56278858 56279028 56278858 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 CDS 56278506 56278739 56278506 ID=Msa0030200-mRNA-1:cds;Parent=Msa0030200-mRNA-1
chr1_1 three_prime_UTR 56278276 56278505 56278276 ID=Msa0030200-mRNA-1:three_prime_utr;Parent=Msa0030200-mRNA-1
Gene Sequence

>Msa0030200

ATGGCAAATTCCTTGGCTTCTCAATTACAAGCTATCAGATCCATAGCACTTACTGATTCCGCACCTCAAAAGCGACCGTTCACTCGTCCTTCTATCTTGTTCGATCCTAAAGAAGCCGCTGATAAGAGTACTGAATCCATTTACACCATCGCTGCTCAAGGATTGGAGGTTCTGATTAGCACCGATGAAAGGTTTAGGAATTATAAGAATAGTTTGTTCAGTCCCCAGAGTAAAGAATTGGATAGAGGGTTAAAGACAGAAGACGAGAATAAACAACTTAATTCTTTGATTAATCTGTATTTGAAACTACTTTCTGGATATTTTAATCTTCCGGCTGCACTTCAAACGCTCGAGTATTTGATACGTGTATACAAGATACATGAGCACAATGTTGAGGATTTGATTTTGTGTGCATTGCCGTACCACGACACACATGCATTTGTTCGTGTAGTACAGATACTTAACATACGGAATGGTATATGGGAGTTTCTTAAAGGTGTGAAAGACTCGGGTGCAACACTACCTAGAATGGTTATAGTGCAGCAATGTCTTCGTGATTGTGGTGTATTATTAAAAAAATTATGCGACTATGCATCTCCATCCAAAAATCCTTCAAAGAATGTAATTGGCTTTTGCACTGCTGTTGTTGTTGAAGTTTTGGGTGTGAGGGTTGATGAAGATATTGTCAAAATCATATATCCTTTCGTGAATTCTGGTCTTCAGCCTGATAAGAAGGATCTTTCAGATCACAAGGCAAGTTCATTGATGATAGTTTGCTTGCTTGGACATAAAACAACATTAGCTCCATCACTTTTGAATGGTTTGATACGTTCAGTTGCCGGGATTGCTCGTGCTTGTGAGGAGGCTAAAGATCTTCATTGGTTTCGGTTGTCCCTTATTGCCTTAATCAATCTTGTCCAGTCCCAAAATGTTGACACACTTCCAACGAAGGCCTTGGATGTTTTAAAGAAACTAAGGGATTTGCCTGGGGTTTTATTAGAATTGTCTAAGGAGTTCAACATTGAAAAGTTTCTCATTGTTCTGTTGGACTCCCTAATTATCTGCAGTTCTAAGGATGAAGACTGCCAGCAGGCTTTGCTGTCCTTGATAGAAAAGGTCCCCATAAATGACTCTGTTCATCATGTGGTTACCAAGATCCTATCAACTTGTGTGAAACTATCAGAAAAAGTTGGTGACTCAACATCTTCGATGTCAGCTGGCTGGGCAAAAGAGACTCTGAAAATTGTTGATATGAAGTGTCCTTCTGAACTCCGTGCAGCAGTTCATCATTTTCTTCAGCAGCATAACGCAGCACATTCTAAGAAAGACAATTCATTGTATAAGATTTTATGTAAGATGTTGGATGGCAATTTGGATTCATCATCTGATATCTCGATGTCAAAAGTTTGGTTTGGCTTGTATCATCCAAAGGCTGATATTAGACGTACTACACTGCTTGATATAAATTCTTCGGGCATCTTGAAAAACAAGGCATTTGTTTCAGAGGGTCTTATTGACATCCCAGAGGCCATATTGAGACAGTTTGATGATGAAGATCTAACAGTTGTTCAAGCAGCTTTAAATGTCGATGGCTTGGAAAACGTACCAGATTCTTCTAAGCTTCTCGAGGCACTGCAAAATGTGCTAAGAAGATGTGTTGGCAAGCTGCTGTCTGTTGCTGTCACTTGTCTAAAGAAAGCCATATCATACTTCCATGATCAGTACTTGGAAAGCATCGCTGCCATGATTTATCCATTACTCCTTGCTATGCCACAGACACAGGACTTAAATTTAAAAGCTCTGGTAATAGTCAAAGAAATTAACTGGCAACTTTATGATAATATTGCTGAAGAAACGACATCGATACCTGGATGTTTATCTTCAATTAACTTGAAGGTTATCAAAAAATTGGCTGGCAATTTCATGGTCCACCATGAAGATAATATCGATTGGTTTGTTAAAAGCTGCAATGATACAAAATTGTCAAAGACACTATTCTTTTTTGTTCTATTGCAGTCTCTTGTGCTGATAAAACCAAAAGGTGATAATGACTTTTCTGCACTCTTTGAAAGTGTGTTTCCTATTCTGAAGGCTGAGTGGGAATCTTCAGTGAATGCTGGTGATGTTCTTTTGGACGAGTTCAATTCTGAAGTGTTAGACTTAAACTCGGACTGTAGTGCATTCCTTGATCAGCTTTTGTATGCCAAACTCGGACCTCTAAATGCAAAAGTTATGGCTTGCATATTTTGGAGGCTGATTAAAGCACTAGTGCCAGATAAATCATCAGGCAATCTACTGGATGATAGCAAGATAAAGGATCTGTTTGTATTTTTCGCTTTGTCAAAGTTCGGAAATGCTTTCCATGAACACCTCCATTTCTTAGCAGCACAGTTCAGATCTGCCCACCTATTATCTAAGTTTTTTACAGACGAAGGTGTTCCTGCTGTAGTCCAAGTTGAAAGTCTCCAGTGCTATGGATCTCTTTGTACTCTGCAGCAAAATGGATGTCAAACTGATATTTTGGCTGAATTTCCTTCTCTTCTTGTTCCATTGGCCGGTGATGATCAGTCTGTAAGGGTTGCTTCCATGGAGTGTATTGTTAAGTTACACGCTTTGCGGGGTCGCATTGAACATGGGTTCCAGTTTCTGGAAGAACTTCTAATTGCGTTGGTTCAGATAAAAAAACTTATATTGTCTGACAAGAAAATTCTCTCAGCGTTGTTCACGTCCTCACTGGGGTCCACACCGGGCTCGTCCTATCATAATATCCTATTACCTCCAAATATGCAAAACAGGTTTGCTAAAAAAGAAGAAATACTTGAGTTCATTTTGGGTTATACTGGGAAATTCTCCAACTACGGGAAGCTAATGATTCTTTCCTTGCTCAAGGGAATTGGGCATCCTAAAATATCATCAATGCTGTCTAATTTAATGGAGCGATACTATAATAAACACGGCAATTCTTTCCAGAAATTTTCAAACACTGAAACTAGGATACTGTGTCTTTTGTTGGAGAACTGTGTAATGTCTTCTCCTTCAGGTGGAGATGATCTTCAAAACTCTTTACAGAAAGTGTTGCAGTTGGATGGCATGACTTCAGACAACCCTGCTTATGTAGAGCCTTGCATCACTGTCTTGAAAAAGCTTAATAGTCAATTCTACACGGGGTTGCAGGATAAAGCAAAGGAACAATTATGCCTTGCACTTGTGTTTCTGTGCCGTAATGCTAATGGTGATGTACAAATTGCAACTAGAGAGGCCTTGATGCGCATAAATATAGATTTCAAAACTGTTGGCCGCATACTTGACCTCATACTTGCACCAAAGTGTGGCAAAATTAGGTCAGCAGACAAAAAGAGACAGAAATTGACAACACATCATGAAGAAGAACTTGATGACATATGCAGAATAGATAATCTGGTCGACAGTCTTAGTTCCCTTCTTGATGTTTTGTTACTGAAGAAAGACATAACAAACAGGCATTCTCTCTTAGACCCTTTATTTAAACTTCTTAGCGAAGTATTTTCAGAAGAATGGGTAAATGACACACTTTCCCTTGAGGAAGGATCATCCCAACCGCCGTCAAGTCTTTCCGAAACTGTAAATCATATTCAACAGACTCTATTGATTATCCTGGAGGATATAATCATGTCTCATGATAGCATGGCTGTGCTAAATGAAAAAATGACTAATGAGATTAATATTAAGCTACTGATAGAGTTTGCCCGGACTACTGATGTTGTTGTCACCCGCAACCATATATTTTCTCTGCTTTCTGCTGTCATTAGAGTCTTACCAGAAAAAGTGTTTGGGCATCTAATTGATATTCTTCCAGTTATTGGAGAATCAGCTGTCACACAGATCGACAGTCATTCAAAGCATGTATTTGAGGATCTTATATCTGCGATTGTTCCTTGTTGGCTGTCTAAGACAGATGATGTGGAGAAATTACTGAAGGTTTTCATAGATATATTTCCTGAAATTGTTGAGCACAGAAGGCTATCAATTGTTTTATATCTCCTACGAACTTTGGGTGAGGGTAAAAAATGCTTGGCCTCATTACTTATATTGTTGTTCACTTCCTTAGTTTCAAGGAAAGCCACCTGTTTCCTCAATATTGAGACGCCAGATGCTTTAACATTTTGTACTATAGAGTGGGAATATAAATTAGCAGTGCAGATTTGTGAACAGTATACAAGTATGACTTGGCTTCCTTCTTTAGTTTCCTTTTATGAACAGAGAGGAAATAAAAATGTTGACCAGTCAATGTTTCTGGAGTTGTTTCTGGCAATGCGATTTTGTTTGCAGAAGTTGCAAGATCCTGAATTGTTGTTCAAACTAGAATCAGGAGAAGGCTCTCTTGTCATTCAGAGTCAACTCGGAGAGCTTATGGAACATGTTGTTTTCCTCTTGCATCTTGTAGATGCAAGAAAAAAGGAACTAAATTTCTCTGTCATTGTGAGGAAAGAGTTGAAGGAAACTATGCGCGCTGTTGTGAGGAATATAACAATGGTTATGAGTCCTTCGATATACTTCAAGAGCATAATTAATTTGCTCGATCATTCAGATAAAGATGTTGGAGAAAAGGCTCTTGGGCTGTTATGTGATGCTGCAAGAAATCATGTAACAGTCAGCTTAACGCCTAAAGGCAACAAAGGTTCAAGATCAAGATCAAGTTCTCGTTGGCTTCAATTGGATGAAAGTTCTCAAGAATCACTTAATAATATGTGTTTAGAAATTCGTAAAGTCCTTGATGACGATTCATCAAACAACTCCTTGAAAGTGGCAGCAGTTTCAGCGTTGGAAGTTCTTGCAGAAAGTTTTCCTTCGAATAGTTCCACCTTCGTTGCATGCCTTGAATCTATTATTAGAAGATGCAATACATCTCAGAACTCTGCCGTGACTTCTAGTTGCCTTCGAACTTCCGCTGCGTTGATCAAAGTTCTTGGTCCAAAAGCACTGTCGAAACTTGATCAAATTATGACCGTGATAAAGTCCTCTAAGGATTTGGAACGAAAAGCTAACGATGTTTCCCCAGCCTCAAATGCACCCCATCTTGTTTCTGTTCTTGTTACTTTGGAGGCAGTTGTTGTCAAACTTGGTGGATTCCTAACTAAAGATTTAAAAAATATCATGGAGCTTCTGGTGCTTCGTCCAGAATTTGTCTCAGGAATAGATGCCAAAGTGGAATCCCGTGCTCATGGATTACGAAAGCTTCTTGCGGAAAAAATTCCAGTACGGCTTGCCCTGCCGCCATTGTTAGAAATATACCCAACTGCTGTTGAGGCTGGGGATAAAAGCTTAACAATTGTGTTTGATATGTTGGCAACATTTATTGGTACAATGGACAGATCATCTATTGTGGCATTCCATGGAAGGATTTTTGACTTTTGTTTGGTTGCTCTTGATCTTCGTCGAAGTCCTCATTCAGTTCAAAACATTGATTTAGTGGAAGAAGGTGTGAAGAATGCTATGCTTGCACTGACCCTAAAGCTTACAGAGAGCATGTTCAAGCCTCTTTTTATAAGGAGTATTGAGTGGGTAGTCGATGAAACTGTATCTTCAGGAAGCATGGATAGGGCCATATCTTTCTATGGCATGGTAAATAAGCTTGCTGAGAACCATCGGTCATTGTTTGTTCCTTACTTCAAATACTTGCTTAGTAACTGTGTTCATCATCTTGGCGATGGCGGAGACCTTAAAATGTTTAGTTCGAGTCAGAAGAAAAAGAAGGCTAAGATTTTGGGCGACGGCGATGTAAAAGAAACAGATATCTTGTCTGTCAAGGGCTGGCATCTCAGGACACTAATGTTGTTGAAACCTATTGTTTCTCAACTTGATCTAGAGCCACCTGCCTCGTTGGATGACCACATGAATATACCTAGCGTGACGGAATTTGATGACCTACTTGTTGTTTGCATCGGTCAAATGGCGGTCACAGCTGGCTCAGACCTTTTGTGGCAACCTCTGAACCGCGAAGTTTTGATGCAGACACAACGTACCGAGAAGACACGAGCTAGAATATTGGGTCTTAGAATTGTTAAATACCTTGTAGATAACTTGAAAGAAGAATATTCAGTGTTATTAGCTGAAACAATTCCCATCCTCGTTGAACTGCTTGAGGATGTGGAACTTTCAGTTAAATCTCTTGCACAGGAAATTCTGCAGGAAATAGAGTCTTTGAGTGGGGAGAGCCTTCGAGACTACCTATGA
Protein sequence

>Msa0030200

MANSLASQLQAIRSIALTDSAPQKRPFTRPSILFDPKEAADKSTESIYTIAAQGLEVLISTDERFRNYKNSLFSPQSKELDRGLKTEDENKQLNSLINLYLKLLSGYFNLPAALQTLEYLIRVYKIHEHNVEDLILCALPYHDTHAFVRVVQILNIRNGIWEFLKGVKDSGATLPRMVIVQQCLRDCGVLLKKLCDYASPSKNPSKNVIGFCTAVVVEVLGVRVDEDIVKIIYPFVNSGLQPDKKDLSDHKASSLMIVCLLGHKTTLAPSLLNGLIRSVAGIARACEEAKDLHWFRLSLIALINLVQSQNVDTLPTKALDVLKKLRDLPGVLLELSKEFNIEKFLIVLLDSLIICSSKDEDCQQALLSLIEKVPINDSVHHVVTKILSTCVKLSEKVGDSTSSMSAGWAKETLKIVDMKCPSELRAAVHHFLQQHNAAHSKKDNSLYKILCKMLDGNLDSSSDISMSKVWFGLYHPKADIRRTTLLDINSSGILKNKAFVSEGLIDIPEAILRQFDDEDLTVVQAALNVDGLENVPDSSKLLEALQNVLRRCVGKLLSVAVTCLKKAISYFHDQYLESIAAMIYPLLLAMPQTQDLNLKALVIVKEINWQLYDNIAEETTSIPGCLSSINLKVIKKLAGNFMVHHEDNIDWFVKSCNDTKLSKTLFFFVLLQSLVLIKPKGDNDFSALFESVFPILKAEWESSVNAGDVLLDEFNSEVLDLNSDCSAFLDQLLYAKLGPLNAKVMACIFWRLIKALVPDKSSGNLLDDSKIKDLFVFFALSKFGNAFHEHLHFLAAQFRSAHLLSKFFTDEGVPAVVQVESLQCYGSLCTLQQNGCQTDILAEFPSLLVPLAGDDQSVRVASMECIVKLHALRGRIEHGFQFLEELLIALVQIKKLILSDKKILSALFTSSLGSTPGSSYHNILLPPNMQNRFAKKEEILEFILGYTGKFSNYGKLMILSLLKGIGHPKISSMLSNLMERYYNKHGNSFQKFSNTETRILCLLLENCVMSSPSGGDDLQNSLQKVLQLDGMTSDNPAYVEPCITVLKKLNSQFYTGLQDKAKEQLCLALVFLCRNANGDVQIATREALMRINIDFKTVGRILDLILAPKCGKIRSADKKRQKLTTHHEEELDDICRIDNLVDSLSSLLDVLLLKKDITNRHSLLDPLFKLLSEVFSEEWVNDTLSLEEGSSQPPSSLSETVNHIQQTLLIILEDIIMSHDSMAVLNEKMTNEINIKLLIEFARTTDVVVTRNHIFSLLSAVIRVLPEKVFGHLIDILPVIGESAVTQIDSHSKHVFEDLISAIVPCWLSKTDDVEKLLKVFIDIFPEIVEHRRLSIVLYLLRTLGEGKKCLASLLILLFTSLVSRKATCFLNIETPDALTFCTIEWEYKLAVQICEQYTSMTWLPSLVSFYEQRGNKNVDQSMFLELFLAMRFCLQKLQDPELLFKLESGEGSLVIQSQLGELMEHVVFLLHLVDARKKELNFSVIVRKELKETMRAVVRNITMVMSPSIYFKSIINLLDHSDKDVGEKALGLLCDAARNHVTVSLTPKGNKGSRSRSSSRWLQLDESSQESLNNMCLEIRKVLDDDSSNNSLKVAAVSALEVLAESFPSNSSTFVACLESIIRRCNTSQNSAVTSSCLRTSAALIKVLGPKALSKLDQIMTVIKSSKDLERKANDVSPASNAPHLVSVLVTLEAVVVKLGGFLTKDLKNIMELLVLRPEFVSGIDAKVESRAHGLRKLLAEKIPVRLALPPLLEIYPTAVEAGDKSLTIVFDMLATFIGTMDRSSIVAFHGRIFDFCLVALDLRRSPHSVQNIDLVEEGVKNAMLALTLKLTESMFKPLFIRSIEWVVDETVSSGSMDRAISFYGMVNKLAENHRSLFVPYFKYLLSNCVHHLGDGGDLKMFSSSQKKKKAKILGDGDVKETDILSVKGWHLRTLMLLKPIVSQLDLEPPASLDDHMNIPSVTEFDDLLVVCIGQMAVTAGSDLLWQPLNREVLMQTQRTEKTRARILGLRIVKYLVDNLKEEYSVLLAETIPILVELLEDVELSVKSLAQEILQEIESLSGESLRDYL*