AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0125830

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0125830 MtrunA17_Chr1g0188091 95.065 385 18 1 1 385 1 384 0.0 741
Msa0125830 MtrunA17_Chr1g0166241 56.883 385 128 11 1 382 1 350 6.16e-130 377
Msa0125830 MtrunA17_Chr1g0184881 50.904 387 136 14 4 383 5 344 1.89e-103 309
Msa0125830 MtrunA17_Chr7g0260551 49.741 386 146 15 4 382 5 349 9.15e-100 300
Msa0125830 MtrunA17_Chr7g0251511 45.578 147 74 2 174 315 129 274 1.08e-36 135
Msa0125830 MtrunA17_Chr4g0075591 42.975 121 69 0 176 296 118 238 1.38e-33 126
Msa0125830 MtrunA17_Chr4g0075611 42.063 126 73 0 171 296 131 256 1.62e-33 126
Msa0125830 MtrunA17_Chr8g0384101 39.024 164 85 4 160 310 60 221 2.33e-32 122
Msa0125830 MtrunA17_Chr2g0289701 46.018 113 61 0 184 296 142 254 3.93e-31 120
Msa0125830 MtrunA17_Chr2g0282301 39.716 141 77 4 173 307 140 278 4.46e-29 115
Msa0125830 MtrunA17_Chr4g0040171 37.324 142 80 3 180 314 123 262 3.69e-28 112
Msa0125830 MtrunA17_Chr7g0234691 31.064 235 130 7 79 303 92 304 5.48e-26 107
Msa0125830 MtrunA17_Chr4g0047231 36.220 127 75 2 174 294 147 273 8.86e-26 106
Msa0125830 MtrunA17_Chr4g0047221 37.190 121 70 2 180 294 206 326 1.40e-25 106
Msa0125830 MtrunA17_Chr8g0339051 28.205 234 146 5 77 303 47 265 1.38e-24 102
Msa0125830 MtrunA17_Chr5g0396281 35.252 139 79 2 176 308 97 230 1.97e-24 100
Msa0125830 MtrunA17_Chr2g0282311 30.719 153 99 3 173 319 140 291 4.34e-23 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0125830 AT3G22970.1 60.831 337 117 8 4 337 5 329 1.76e-118 348
Msa0125830 AT4G14620.1 51.804 388 125 14 4 383 2 335 1.34e-105 315
Msa0125830 AT2G38820.2 50.505 297 121 10 4 296 5 279 3.86e-87 266
Msa0125830 AT3G22970.2 62.437 197 73 1 141 337 23 218 5.63e-74 231
Msa0125830 AT3G54550.1 42.568 296 131 9 5 295 6 267 5.60e-63 204
Msa0125830 AT2G38820.1 44.550 211 85 11 4 207 5 190 5.78e-36 131
Msa0125830 AT2G39650.2 41.045 134 73 1 176 303 48 181 9.19e-32 120
Msa0125830 AT2G39650.1 41.045 134 73 1 176 303 110 243 1.97e-31 121
Msa0125830 AT3G07350.1 39.568 139 78 1 176 308 135 273 2.24e-31 121
Msa0125830 AT4G32480.1 39.355 155 82 4 176 324 116 264 1.56e-30 118
Msa0125830 AT1G77160.1 33.149 181 100 3 141 300 42 222 1.79e-30 117
Msa0125830 AT1G77145.1 39.189 148 72 2 173 302 72 219 1.01e-29 115
Msa0125830 AT1G77160.2 39.041 146 71 2 173 300 22 167 1.12e-29 114
Msa0125830 AT3G25240.1 40.940 149 78 3 155 294 93 240 6.80e-29 114
Msa0125830 AT2G20670.1 39.394 132 72 3 176 300 117 247 5.32e-27 109
Msa0125830 AT1G12030.1 34.177 158 97 4 139 295 79 230 8.94e-25 103
Msa0125830 AT1G62420.1 31.325 166 110 2 133 295 66 230 9.60e-25 102
Msa0125830 AT1G77145.2 44.231 104 48 1 209 302 59 162 1.91e-23 97.4

Find 103 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTATTAGCGTTCTGGATT+AGG 0.250555 1_3:+54577705 None:intergenic
GGCGAGACGTGCATTGTTAA+TGG 0.255163 1_3:+54577569 None:intergenic
ACGGGATGTAATAATGAAAA+TGG 0.290817 1_3:-54575882 Msa0125830:three_prime_UTR
CGGTGAGAAAATATCTTTGC+AGG 0.298776 1_3:-54576228 Msa0125830:CDS
TATCTTCTCTATTAGCGTTC+TGG 0.320600 1_3:+54577699 None:intergenic
AATAGATGCAACTGCTTTAA+CGG 0.345730 1_3:-54577123 Msa0125830:CDS
GTGGTAATGACTACTGTTTA+TGG 0.349845 1_3:+54575903 None:intergenic
CTTCGATTTGCAAATCGAAA+TGG 0.365715 1_3:-54576763 Msa0125830:CDS
GACTTCCTCCACGGCGGGAC+AGG 0.368324 1_3:+54576395 None:intergenic
GTGGAGGAAGTCAGAGTATA+TGG 0.390934 1_3:-54576384 Msa0125830:CDS
GAAAATATCTTTGCAGGAAT+CGG 0.392848 1_3:-54576222 Msa0125830:CDS
ACACTCTTTACTTTCACTTC+CGG 0.395441 1_3:+54576140 None:intergenic
TTTGAGATTGCTCGATCGAC+GGG 0.423911 1_3:-54576539 Msa0125830:CDS
CGCCGGAATGTTCATTTCAC+CGG 0.425304 1_3:+54577608 None:intergenic
TTCGGAGAATCTATCGCTAC+TGG 0.430931 1_3:-54577063 Msa0125830:CDS
GACGAAGAACTTGATTTCTT+CGG 0.430952 1_3:-54577081 Msa0125830:CDS
TTTCCTTCTTCTATGGTTTG+AGG 0.431240 1_3:+54576084 None:intergenic
TGTATTTCCTTTGAAACAAA+GGG 0.434432 1_3:-54575942 Msa0125830:three_prime_UTR
GAACACGTGGCGGCGATGAT+TGG 0.434740 1_3:+54577548 None:intergenic
GCCGGCGAAGTTCCACTTCC+CGG 0.448391 1_3:-54577258 Msa0125830:CDS
GCAGAAAATCTTCAATCTCT+AGG 0.452854 1_3:-54576794 Msa0125830:CDS
TTTGCTAAGGCAACGGAGCT+AGG 0.455852 1_3:+54577210 None:intergenic
GGTTCATCGGACTTGTCGCC+GGG 0.456543 1_3:+54577240 None:intergenic
ACAGAGTCCCTTTGTTTCAA+AGG 0.458771 1_3:+54575935 None:intergenic
CAATAGAACAAACACATTGC+CGG 0.458931 1_3:-54577646 Msa0125830:five_prime_UTR
GAGTCTGTCACGAAGGTTGT+CGG 0.460032 1_3:+54576311 None:intergenic
TCGGACTTGTCGCCGGGAAG+TGG 0.462109 1_3:+54577246 None:intergenic
AAAGGAGCGACAGTGGTGAC+TGG 0.464611 1_3:-54576113 Msa0125830:CDS
GTTGCCGACGTGGCAATTAC+CGG 0.465887 1_3:-54576159 Msa0125830:CDS
AGGTTTCTCTGAGAAGTTAG+TGG 0.470712 1_3:+54577287 None:intergenic
TGAATATATCGATGTGTTTG+TGG 0.473335 1_3:-54576603 Msa0125830:CDS
AAAGTAAAGAGTGTTGAGAA+AGG 0.492470 1_3:-54576131 Msa0125830:CDS
GTTTGAGATTGCTCGATCGA+CGG 0.495268 1_3:-54576540 Msa0125830:CDS
TCGATCGACGGGAACGTTCA+AGG 0.497302 1_3:-54576528 Msa0125830:CDS
AAAGCATAATCAAAATCAAA+AGG 0.501310 1_3:-54576027 Msa0125830:three_prime_UTR
CGCCGGTGAAATGAACATTC+CGG 0.504576 1_3:-54577610 Msa0125830:five_prime_UTR
ACTGGTTCTTTCAACGATGC+TGG 0.504722 1_3:-54577045 Msa0125830:CDS
TTGTATTTCCTTTGAAACAA+AGG 0.510341 1_3:-54575943 Msa0125830:three_prime_UTR
AAGCAGAGTTTGAAGAAGAA+AGG 0.517627 1_3:-54576422 Msa0125830:CDS
CTGAATCGATGTCGATCGGT+TGG 0.517827 1_3:+54577418 None:intergenic
GCAACGGAGCTAGGCTCAAA+CGG 0.518520 1_3:+54577219 None:intergenic
CGGTTCATCGGACTTGTCGC+CGG 0.521847 1_3:+54577239 None:intergenic
CGATGCTGGTGACGCACTCA+AGG 0.535615 1_3:-54577031 Msa0125830:intron
TAGCCTCAAACCATAGAAGA+AGG 0.535681 1_3:-54576087 Msa0125830:exon
GATTTCCCGACGAAAATGTA+AGG 0.537019 1_3:+54576488 None:intergenic
GTCACGAAGGTTGTCGGTGA+CGG 0.537918 1_3:+54576317 None:intergenic
GCCGGGAAGTGGAACTTCGC+CGG 0.539650 1_3:+54577257 None:intergenic
CGACGGTGGTGTTGCCGACG+TGG 0.539789 1_3:-54576169 Msa0125830:CDS
CAGGAATCGGAAACTGTCTC+CGG 0.542143 1_3:-54576209 Msa0125830:CDS
AAAGACTCTTCGTGTTCGAC+CGG 0.544489 1_3:-54577335 Msa0125830:CDS
GGAACTTCGCCGGCGACGAT+AGG 0.549626 1_3:+54577267 None:intergenic
GCTAGGCTCAAACGGTTCAT+CGG 0.551711 1_3:+54577227 None:intergenic
CCGGCGAGTTTCACTATCGC+CGG 0.560249 1_3:+54577627 None:intergenic
TTGACGCGTTTGAAAACTGC+CGG 0.562462 1_3:+54577316 None:intergenic
TGTTGAGAAAGGAGCGACAG+TGG 0.564434 1_3:-54576120 Msa0125830:CDS
AATACCTTGTGCGAGTGTTG+CGG 0.566333 1_3:-54576903 Msa0125830:CDS
TTCAGACGAGATTTCAACAC+AGG 0.566428 1_3:+54577357 None:intergenic
TCAGATCGTCACCGTCGTAT+CGG 0.567992 1_3:-54576453 Msa0125830:CDS
CGTCACCGTCGTATCGGAGG+CGG 0.569275 1_3:-54576447 Msa0125830:CDS
AGACGGATTCACTCTGCTGC+AGG 0.574879 1_3:+54576340 None:intergenic
ATCACTCTCCGACGCAACGC+CGG 0.579926 1_3:+54576274 None:intergenic
GACTCGAAGGAGGATCTGAC+CGG 0.581417 1_3:-54576293 Msa0125830:CDS
TTCTCTGAATCGATGTCGAT+CGG 0.583729 1_3:+54577414 None:intergenic
GGTGAGTGGGAACTGATCTT+CGG 0.586732 1_3:-54576248 Msa0125830:CDS
CGGAGAGTGATTGTGGTGAG+TGG 0.590871 1_3:-54576262 Msa0125830:CDS
GAATGCCTGTCCCGCCGTGG+AGG 0.591996 1_3:-54576400 Msa0125830:CDS
AAAACAAAATCTCATCCAGC+TGG 0.593313 1_3:-54576737 Msa0125830:intron
GGATCTGACCGGCGTTGCGT+CGG 0.593452 1_3:-54576282 Msa0125830:CDS
AACCTTCGTGACAGACTCGA+AGG 0.593595 1_3:-54576306 Msa0125830:CDS
AAGGTTGTCGGTGACGGAGA+CGG 0.594096 1_3:+54576323 None:intergenic
TGCACTACAGTATTATCTCG+TGG 0.598652 1_3:+54577526 None:intergenic
ACTCTGACTTCCTCCACGGC+GGG 0.602994 1_3:+54576390 None:intergenic
ATGTGTTTGTGGAAGGTGAG+AGG 0.604456 1_3:-54576592 Msa0125830:CDS
CGGATTCACTCTGCTGCAGG+AGG 0.617962 1_3:+54576343 None:intergenic
GTATTATCTCGTGGAACACG+TGG 0.621242 1_3:+54577535 None:intergenic
CAGAGTATATGGTAGCTAAG+TGG 0.623568 1_3:-54576373 Msa0125830:CDS
CTCCTTCGAGTCTGTCACGA+AGG 0.623645 1_3:+54576304 None:intergenic
GTTGCGTCGGAGAGTGATTG+TGG 0.627922 1_3:-54576269 Msa0125830:CDS
GAAGAAATCAAGTTCTTCGT+CGG 0.630193 1_3:+54577083 None:intergenic
AAGGAATGCCTGTCCCGCCG+TGG 0.630360 1_3:-54576403 Msa0125830:CDS
CTCTCCGCAACACTCGCACA+AGG 0.630481 1_3:+54576899 None:intergenic
GGAGAGTGATTGTGGTGAGT+GGG 0.630723 1_3:-54576261 Msa0125830:CDS
TCAGAGAAACCTATCGTCGC+CGG 0.637917 1_3:-54577276 Msa0125830:CDS
GATCGTCACCGTCGTATCGG+AGG 0.639360 1_3:-54576450 Msa0125830:CDS
CTTCGCCGCCTCCGATACGA+CGG 0.640176 1_3:+54576442 None:intergenic
ATATACTCTGACTTCCTCCA+CGG 0.643784 1_3:+54576386 None:intergenic
ATACGACGGTGACGATCTGA+CGG 0.644479 1_3:+54576456 None:intergenic
CCGGCGATAGTGAAACTCGC+CGG 0.645620 1_3:-54577627 Msa0125830:five_prime_UTR
CGATTCAGAGAAGTTAGCCG+TGG 0.646198 1_3:-54577403 Msa0125830:CDS
TATATCGATGTGTTTGTGGA+AGG 0.646530 1_3:-54576599 Msa0125830:CDS
TAAACAGTAGTCATTACCAC+GGG 0.649655 1_3:-54575900 Msa0125830:three_prime_UTR
TCGATCGGTTGGATCTTCAT+CGG 0.650602 1_3:+54577429 None:intergenic
CACGTCGGCAACACCACCGT+CGG 0.653432 1_3:+54576170 None:intergenic
GAATCGGAAACTGTCTCCGG+TGG 0.655145 1_3:-54576206 Msa0125830:CDS
ACTTCCGGTAATTGCCACGT+CGG 0.655991 1_3:+54576155 None:intergenic
TACTCTGACTTCCTCCACGG+CGG 0.656636 1_3:+54576389 None:intergenic
TGGTGAGAAAATCTCACCGA+CGG 0.675741 1_3:-54576186 Msa0125830:CDS
ATAAACAGTAGTCATTACCA+CGG 0.694310 1_3:-54575901 Msa0125830:three_prime_UTR
AAAACAAAGAGAAATCCGAA+AGG 0.696222 1_3:+54575972 None:intergenic
TTATCTCGTGGAACACGTGG+CGG 0.703524 1_3:+54577538 None:intergenic
CTTCGTGACAGACTCGAAGG+AGG 0.707524 1_3:-54576303 Msa0125830:CDS
TGAGAAAATCTCACCGACGG+TGG 0.711396 1_3:-54576183 Msa0125830:CDS
GACGTCGTTTCGAACAACCA+CGG 0.725989 1_3:+54577386 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTTATTTAAATTTT+TGG - chr1_3:54576784-54576803 Msa0125830:CDS 0.0%
!!! AAATTTTTTATTTAAATTTT+TGG - chr1_3:54576784-54576803 Msa0125830:CDS 0.0%
!! AAAAAATTTCAAAAAAATTG+GGG + chr1_3:54576773-54576792 None:intergenic 10.0%
!! AAAAAATTTCAAAAAAATTG+GGG + chr1_3:54576773-54576792 None:intergenic 10.0%
!!! AACATTCAATTTTTCAAATT+AGG + chr1_3:54576824-54576843 None:intergenic 15.0%
!!! TTAGTTTAATTTTTACCTTT+CGG - chr1_3:54577488-54577507 Msa0125830:five_prime_UTR 15.0%
!!! AACATTCAATTTTTCAAATT+AGG + chr1_3:54576824-54576843 None:intergenic 15.0%
!!! TTAGTTTAATTTTTACCTTT+CGG - chr1_3:54577488-54577507 Msa0125830:five_prime_UTR 15.0%
!! TATTAAACTCTGCATAAAAA+AGG + chr1_3:54576556-54576575 None:intergenic 20.0%
!!! AAAAACAGTAAAGTTTTCAA+AGG - chr1_3:54576633-54576652 Msa0125830:intron 20.0%
!! ATTTGAAAAATTGAATGTTG+TGG - chr1_3:54576825-54576844 Msa0125830:CDS 20.0%
!! AAAGCATAATCAAAATCAAA+AGG - chr1_3:54577448-54577467 Msa0125830:exon 20.0%
!! TATTAAACTCTGCATAAAAA+AGG + chr1_3:54576556-54576575 None:intergenic 20.0%
!!! AAAAACAGTAAAGTTTTCAA+AGG - chr1_3:54576633-54576652 Msa0125830:intron 20.0%
!! ATTTGAAAAATTGAATGTTG+TGG - chr1_3:54576825-54576844 Msa0125830:CDS 20.0%
!! AAAGCATAATCAAAATCAAA+AGG - chr1_3:54577448-54577467 Msa0125830:exon 20.0%
!!! ACTGTTTTTGTCAACTATTT+TGG + chr1_3:54576622-54576641 None:intergenic 25.0%
!!! CATTGATATTGATTTTCGTT+CGG - chr1_3:54576911-54576930 Msa0125830:CDS 25.0%
!!! TTGTATTTCCTTTGAAACAA+AGG - chr1_3:54577532-54577551 Msa0125830:five_prime_UTR 25.0%
!!! TGTATTTCCTTTGAAACAAA+GGG - chr1_3:54577533-54577552 Msa0125830:five_prime_UTR 25.0%
!!! ACTGTTTTTGTCAACTATTT+TGG + chr1_3:54576622-54576641 None:intergenic 25.0%
!!! CATTGATATTGATTTTCGTT+CGG - chr1_3:54576911-54576930 Msa0125830:CDS 25.0%
!!! TTGTATTTCCTTTGAAACAA+AGG - chr1_3:54577532-54577551 Msa0125830:five_prime_UTR 25.0%
!!! TGTATTTCCTTTGAAACAAA+GGG - chr1_3:54577533-54577552 Msa0125830:five_prime_UTR 25.0%
AATAGATGCAACTGCTTTAA+CGG - chr1_3:54576352-54576371 Msa0125830:CDS 30.0%
!!! TGTGGTTTTGATTTTGATTC+AGG - chr1_3:54576843-54576862 Msa0125830:CDS 30.0%
TGAATATATCGATGTGTTTG+TGG - chr1_3:54576872-54576891 Msa0125830:CDS 30.0%
! TTTCTTCCTTACATTTTCGT+CGG - chr1_3:54576981-54577000 Msa0125830:intron 30.0%
GAAAATATCTTTGCAGGAAT+CGG - chr1_3:54577253-54577272 Msa0125830:CDS 30.0%
!! AAAGTAAAGAGTGTTGAGAA+AGG - chr1_3:54577344-54577363 Msa0125830:CDS 30.0%
! GCAAAATTTTCCTTCTTCTA+TGG + chr1_3:54577401-54577420 None:intergenic 30.0%
AAAACAAAGAGAAATCCGAA+AGG + chr1_3:54577506-54577525 None:intergenic 30.0%
!!! TTCGGATTTCTCTTTGTTTT+CGG - chr1_3:54577506-54577525 Msa0125830:five_prime_UTR 30.0%
ATAAACAGTAGTCATTACCA+CGG - chr1_3:54577574-54577593 Msa0125830:five_prime_UTR 30.0%
! ATTTTCATTATTACATCCCG+TGG + chr1_3:54577594-54577613 None:intergenic 30.0%
ACGGGATGTAATAATGAAAA+TGG - chr1_3:54577593-54577612 Msa0125830:five_prime_UTR 30.0%
AATAGATGCAACTGCTTTAA+CGG - chr1_3:54576352-54576371 Msa0125830:CDS 30.0%
!!! TGTGGTTTTGATTTTGATTC+AGG - chr1_3:54576843-54576862 Msa0125830:CDS 30.0%
TGAATATATCGATGTGTTTG+TGG - chr1_3:54576872-54576891 Msa0125830:CDS 30.0%
! TTTCTTCCTTACATTTTCGT+CGG - chr1_3:54576981-54577000 Msa0125830:intron 30.0%
GAAAATATCTTTGCAGGAAT+CGG - chr1_3:54577253-54577272 Msa0125830:CDS 30.0%
!! AAAGTAAAGAGTGTTGAGAA+AGG - chr1_3:54577344-54577363 Msa0125830:CDS 30.0%
! GCAAAATTTTCCTTCTTCTA+TGG + chr1_3:54577401-54577420 None:intergenic 30.0%
AAAACAAAGAGAAATCCGAA+AGG + chr1_3:54577506-54577525 None:intergenic 30.0%
!!! TTCGGATTTCTCTTTGTTTT+CGG - chr1_3:54577506-54577525 Msa0125830:five_prime_UTR 30.0%
ATAAACAGTAGTCATTACCA+CGG - chr1_3:54577574-54577593 Msa0125830:five_prime_UTR 30.0%
! ATTTTCATTATTACATCCCG+TGG + chr1_3:54577594-54577613 None:intergenic 30.0%
ACGGGATGTAATAATGAAAA+TGG - chr1_3:54577593-54577612 Msa0125830:five_prime_UTR 30.0%
TATCTTCTCTATTAGCGTTC+TGG + chr1_3:54575779-54575798 None:intergenic 35.0%
CAATAGAACAAACACATTGC+CGG - chr1_3:54575829-54575848 Msa0125830:three_prime_UTR 35.0%
GAAGAAATCAAGTTCTTCGT+CGG + chr1_3:54576395-54576414 None:intergenic 35.0%
GACGAAGAACTTGATTTCTT+CGG - chr1_3:54576394-54576413 Msa0125830:CDS 35.0%
GCAGAAAATCTTCAATCTCT+AGG - chr1_3:54576681-54576700 Msa0125830:intron 35.0%
! CTTCGATTTGCAAATCGAAA+TGG - chr1_3:54576712-54576731 Msa0125830:intron 35.0%
AAAACAAAATCTCATCCAGC+TGG - chr1_3:54576738-54576757 Msa0125830:CDS 35.0%
TATATCGATGTGTTTGTGGA+AGG - chr1_3:54576876-54576895 Msa0125830:CDS 35.0%
! TTCTTCCTTACATTTTCGTC+GGG - chr1_3:54576982-54577001 Msa0125830:intron 35.0%
! TTACATTTTCGTCGGGAAAT+CGG - chr1_3:54576989-54577008 Msa0125830:intron 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG - chr1_3:54577053-54577072 Msa0125830:CDS 35.0%
ACACTCTTTACTTTCACTTC+CGG + chr1_3:54577338-54577357 None:intergenic 35.0%
TTTCCTTCTTCTATGGTTTG+AGG + chr1_3:54577394-54577413 None:intergenic 35.0%
! GTGGTAATGACTACTGTTTA+TGG + chr1_3:54577575-54577594 None:intergenic 35.0%
TAAACAGTAGTCATTACCAC+GGG - chr1_3:54577575-54577594 Msa0125830:five_prime_UTR 35.0%
TATCTTCTCTATTAGCGTTC+TGG + chr1_3:54575779-54575798 None:intergenic 35.0%
CAATAGAACAAACACATTGC+CGG - chr1_3:54575829-54575848 Msa0125830:three_prime_UTR 35.0%
GAAGAAATCAAGTTCTTCGT+CGG + chr1_3:54576395-54576414 None:intergenic 35.0%
GACGAAGAACTTGATTTCTT+CGG - chr1_3:54576394-54576413 Msa0125830:CDS 35.0%
GCAGAAAATCTTCAATCTCT+AGG - chr1_3:54576681-54576700 Msa0125830:intron 35.0%
! CTTCGATTTGCAAATCGAAA+TGG - chr1_3:54576712-54576731 Msa0125830:intron 35.0%
AAAACAAAATCTCATCCAGC+TGG - chr1_3:54576738-54576757 Msa0125830:CDS 35.0%
TATATCGATGTGTTTGTGGA+AGG - chr1_3:54576876-54576895 Msa0125830:CDS 35.0%
! TTCTTCCTTACATTTTCGTC+GGG - chr1_3:54576982-54577001 Msa0125830:intron 35.0%
! TTACATTTTCGTCGGGAAAT+CGG - chr1_3:54576989-54577008 Msa0125830:intron 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG - chr1_3:54577053-54577072 Msa0125830:CDS 35.0%
ACACTCTTTACTTTCACTTC+CGG + chr1_3:54577338-54577357 None:intergenic 35.0%
TTTCCTTCTTCTATGGTTTG+AGG + chr1_3:54577394-54577413 None:intergenic 35.0%
! GTGGTAATGACTACTGTTTA+TGG + chr1_3:54577575-54577594 None:intergenic 35.0%
TAAACAGTAGTCATTACCAC+GGG - chr1_3:54577575-54577594 Msa0125830:five_prime_UTR 35.0%
GAAAAAGAAGAAACGTTCGC+CGG + chr1_3:54575887-54575906 None:intergenic 40.0%
TGCACTACAGTATTATCTCG+TGG + chr1_3:54575952-54575971 None:intergenic 40.0%
TTCTCTGAATCGATGTCGAT+CGG + chr1_3:54576064-54576083 None:intergenic 40.0%
TTCAGACGAGATTTCAACAC+AGG + chr1_3:54576121-54576140 None:intergenic 40.0%
! AGGTTTCTCTGAGAAGTTAG+TGG + chr1_3:54576191-54576210 None:intergenic 40.0%
!! CACCATTTTTGCTAAGGCAA+CGG + chr1_3:54576275-54576294 None:intergenic 40.0%
!! ACTCTGCACCATTTTTGCTA+AGG + chr1_3:54576281-54576300 None:intergenic 40.0%
GATTTCCCGACGAAAATGTA+AGG + chr1_3:54576990-54577009 None:intergenic 40.0%
ATATACTCTGACTTCCTCCA+CGG + chr1_3:54577092-54577111 None:intergenic 40.0%
CAGAGTATATGGTAGCTAAG+TGG - chr1_3:54577102-54577121 Msa0125830:CDS 40.0%
CGGTGAGAAAATATCTTTGC+AGG - chr1_3:54577247-54577266 Msa0125830:CDS 40.0%
TAGCCTCAAACCATAGAAGA+AGG - chr1_3:54577388-54577407 Msa0125830:CDS 40.0%
! ACAGAGTCCCTTTGTTTCAA+AGG + chr1_3:54577543-54577562 None:intergenic 40.0%
! CAAGCACGCATTTTTAACAG+TGG + chr1_3:54577641-54577660 None:intergenic 40.0%
GAAAAAGAAGAAACGTTCGC+CGG + chr1_3:54575887-54575906 None:intergenic 40.0%
TGCACTACAGTATTATCTCG+TGG + chr1_3:54575952-54575971 None:intergenic 40.0%
TTCTCTGAATCGATGTCGAT+CGG + chr1_3:54576064-54576083 None:intergenic 40.0%
TTCAGACGAGATTTCAACAC+AGG + chr1_3:54576121-54576140 None:intergenic 40.0%
! AGGTTTCTCTGAGAAGTTAG+TGG + chr1_3:54576191-54576210 None:intergenic 40.0%
!! CACCATTTTTGCTAAGGCAA+CGG + chr1_3:54576275-54576294 None:intergenic 40.0%
!! ACTCTGCACCATTTTTGCTA+AGG + chr1_3:54576281-54576300 None:intergenic 40.0%
GATTTCCCGACGAAAATGTA+AGG + chr1_3:54576990-54577009 None:intergenic 40.0%
ATATACTCTGACTTCCTCCA+CGG + chr1_3:54577092-54577111 None:intergenic 40.0%
CAGAGTATATGGTAGCTAAG+TGG - chr1_3:54577102-54577121 Msa0125830:CDS 40.0%
CGGTGAGAAAATATCTTTGC+AGG - chr1_3:54577247-54577266 Msa0125830:CDS 40.0%
TAGCCTCAAACCATAGAAGA+AGG - chr1_3:54577388-54577407 Msa0125830:CDS 40.0%
! ACAGAGTCCCTTTGTTTCAA+AGG + chr1_3:54577543-54577562 None:intergenic 40.0%
! CAAGCACGCATTTTTAACAG+TGG + chr1_3:54577641-54577660 None:intergenic 40.0%
GTATTATCTCGTGGAACACG+TGG + chr1_3:54575943-54575962 None:intergenic 45.0%
TCGATCGGTTGGATCTTCAT+CGG + chr1_3:54576049-54576068 None:intergenic 45.0%
AAAGACTCTTCGTGTTCGAC+CGG - chr1_3:54576140-54576159 Msa0125830:CDS 45.0%
TTGACGCGTTTGAAAACTGC+CGG + chr1_3:54576162-54576181 None:intergenic 45.0%
CTCCGTTGCCTTAGCAAAAA+TGG - chr1_3:54576270-54576289 Msa0125830:CDS 45.0%
!!! TTGCGAGTGAGTTTTGAGAC+TGG + chr1_3:54576334-54576353 None:intergenic 45.0%
TTCGGAGAATCTATCGCTAC+TGG - chr1_3:54576412-54576431 Msa0125830:CDS 45.0%
! ACTGGTTCTTTCAACGATGC+TGG - chr1_3:54576430-54576449 Msa0125830:CDS 45.0%
! AATACCTTGTGCGAGTGTTG+CGG - chr1_3:54576572-54576591 Msa0125830:CDS 45.0%
TTGGGGAAAAATGTACCAGC+TGG + chr1_3:54576756-54576775 None:intergenic 45.0%
ATGTGTTTGTGGAAGGTGAG+AGG - chr1_3:54576883-54576902 Msa0125830:CDS 45.0%
! GTTTGAGATTGCTCGATCGA+CGG - chr1_3:54576935-54576954 Msa0125830:intron 45.0%
! TTTGAGATTGCTCGATCGAC+GGG - chr1_3:54576936-54576955 Msa0125830:intron 45.0%
GTGGAGGAAGTCAGAGTATA+TGG - chr1_3:54577091-54577110 Msa0125830:CDS 45.0%
TGGTGAGAAAATCTCACCGA+CGG - chr1_3:54577289-54577308 Msa0125830:CDS 45.0%
GTATTATCTCGTGGAACACG+TGG + chr1_3:54575943-54575962 None:intergenic 45.0%
TCGATCGGTTGGATCTTCAT+CGG + chr1_3:54576049-54576068 None:intergenic 45.0%
AAAGACTCTTCGTGTTCGAC+CGG - chr1_3:54576140-54576159 Msa0125830:CDS 45.0%
TTGACGCGTTTGAAAACTGC+CGG + chr1_3:54576162-54576181 None:intergenic 45.0%
CTCCGTTGCCTTAGCAAAAA+TGG - chr1_3:54576270-54576289 Msa0125830:CDS 45.0%
!!! TTGCGAGTGAGTTTTGAGAC+TGG + chr1_3:54576334-54576353 None:intergenic 45.0%
TTCGGAGAATCTATCGCTAC+TGG - chr1_3:54576412-54576431 Msa0125830:CDS 45.0%
! ACTGGTTCTTTCAACGATGC+TGG - chr1_3:54576430-54576449 Msa0125830:CDS 45.0%
! AATACCTTGTGCGAGTGTTG+CGG - chr1_3:54576572-54576591 Msa0125830:CDS 45.0%
TTGGGGAAAAATGTACCAGC+TGG + chr1_3:54576756-54576775 None:intergenic 45.0%
ATGTGTTTGTGGAAGGTGAG+AGG - chr1_3:54576883-54576902 Msa0125830:CDS 45.0%
! GTTTGAGATTGCTCGATCGA+CGG - chr1_3:54576935-54576954 Msa0125830:intron 45.0%
! TTTGAGATTGCTCGATCGAC+GGG - chr1_3:54576936-54576955 Msa0125830:intron 45.0%
GTGGAGGAAGTCAGAGTATA+TGG - chr1_3:54577091-54577110 Msa0125830:CDS 45.0%
TGGTGAGAAAATCTCACCGA+CGG - chr1_3:54577289-54577308 Msa0125830:CDS 45.0%
!! TAAAAAATTTCAAAAAAATT+GGG + chr1_3:54576774-54576793 None:intergenic 5.0%
!! ATAAAAAATTTCAAAAAAAT+TGG + chr1_3:54576775-54576794 None:intergenic 5.0%
!! TAAAAAATTTCAAAAAAATT+GGG + chr1_3:54576774-54576793 None:intergenic 5.0%
!! ATAAAAAATTTCAAAAAAAT+TGG + chr1_3:54576775-54576794 None:intergenic 5.0%
CGCCGGTGAAATGAACATTC+CGG - chr1_3:54575865-54575884 Msa0125830:three_prime_UTR 50.0%
CGCCGGAATGTTCATTTCAC+CGG + chr1_3:54575870-54575889 None:intergenic 50.0%
GGCGAGACGTGCATTGTTAA+TGG + chr1_3:54575909-54575928 None:intergenic 50.0%
TTATCTCGTGGAACACGTGG+CGG + chr1_3:54575940-54575959 None:intergenic 50.0%
CTGAATCGATGTCGATCGGT+TGG + chr1_3:54576060-54576079 None:intergenic 50.0%
CGATTCAGAGAAGTTAGCCG+TGG - chr1_3:54576072-54576091 Msa0125830:three_prime_UTR 50.0%
GACGTCGTTTCGAACAACCA+CGG + chr1_3:54576092-54576111 None:intergenic 50.0%
TCAGAGAAACCTATCGTCGC+CGG - chr1_3:54576199-54576218 Msa0125830:CDS 50.0%
GCTAGGCTCAAACGGTTCAT+CGG + chr1_3:54576251-54576270 None:intergenic 50.0%
TTTGCTAAGGCAACGGAGCT+AGG + chr1_3:54576268-54576287 None:intergenic 50.0%
ATACGACGGTGACGATCTGA+CGG + chr1_3:54577022-54577041 None:intergenic 50.0%
TCAGATCGTCACCGTCGTAT+CGG - chr1_3:54577022-54577041 Msa0125830:intron 50.0%
GAGTCTGTCACGAAGGTTGT+CGG + chr1_3:54577167-54577186 None:intergenic 50.0%
AACCTTCGTGACAGACTCGA+AGG - chr1_3:54577169-54577188 Msa0125830:CDS 50.0%
GGAGAGTGATTGTGGTGAGT+GGG - chr1_3:54577214-54577233 Msa0125830:CDS 50.0%
GGTGAGTGGGAACTGATCTT+CGG - chr1_3:54577227-54577246 Msa0125830:CDS 50.0%
CAGGAATCGGAAACTGTCTC+CGG - chr1_3:54577266-54577285 Msa0125830:CDS 50.0%
! CGGTGAGATTTTCTCACCAC+CGG + chr1_3:54577288-54577307 None:intergenic 50.0%
TGAGAAAATCTCACCGACGG+TGG - chr1_3:54577292-54577311 Msa0125830:CDS 50.0%
ACTTCCGGTAATTGCCACGT+CGG + chr1_3:54577323-54577342 None:intergenic 50.0%
TGTTGAGAAAGGAGCGACAG+TGG - chr1_3:54577355-54577374 Msa0125830:CDS 50.0%
CGCCGGTGAAATGAACATTC+CGG - chr1_3:54575865-54575884 Msa0125830:three_prime_UTR 50.0%
CGCCGGAATGTTCATTTCAC+CGG + chr1_3:54575870-54575889 None:intergenic 50.0%
GGCGAGACGTGCATTGTTAA+TGG + chr1_3:54575909-54575928 None:intergenic 50.0%
TTATCTCGTGGAACACGTGG+CGG + chr1_3:54575940-54575959 None:intergenic 50.0%
CTGAATCGATGTCGATCGGT+TGG + chr1_3:54576060-54576079 None:intergenic 50.0%
CGATTCAGAGAAGTTAGCCG+TGG - chr1_3:54576072-54576091 Msa0125830:three_prime_UTR 50.0%
GACGTCGTTTCGAACAACCA+CGG + chr1_3:54576092-54576111 None:intergenic 50.0%
TCAGAGAAACCTATCGTCGC+CGG - chr1_3:54576199-54576218 Msa0125830:CDS 50.0%
GCTAGGCTCAAACGGTTCAT+CGG + chr1_3:54576251-54576270 None:intergenic 50.0%
TTTGCTAAGGCAACGGAGCT+AGG + chr1_3:54576268-54576287 None:intergenic 50.0%
ATACGACGGTGACGATCTGA+CGG + chr1_3:54577022-54577041 None:intergenic 50.0%
TCAGATCGTCACCGTCGTAT+CGG - chr1_3:54577022-54577041 Msa0125830:intron 50.0%
GAGTCTGTCACGAAGGTTGT+CGG + chr1_3:54577167-54577186 None:intergenic 50.0%
AACCTTCGTGACAGACTCGA+AGG - chr1_3:54577169-54577188 Msa0125830:CDS 50.0%
GGAGAGTGATTGTGGTGAGT+GGG - chr1_3:54577214-54577233 Msa0125830:CDS 50.0%
GGTGAGTGGGAACTGATCTT+CGG - chr1_3:54577227-54577246 Msa0125830:CDS 50.0%
CAGGAATCGGAAACTGTCTC+CGG - chr1_3:54577266-54577285 Msa0125830:CDS 50.0%
! CGGTGAGATTTTCTCACCAC+CGG + chr1_3:54577288-54577307 None:intergenic 50.0%
TGAGAAAATCTCACCGACGG+TGG - chr1_3:54577292-54577311 Msa0125830:CDS 50.0%
ACTTCCGGTAATTGCCACGT+CGG + chr1_3:54577323-54577342 None:intergenic 50.0%
TGTTGAGAAAGGAGCGACAG+TGG - chr1_3:54577355-54577374 Msa0125830:CDS 50.0%
GCAACGGAGCTAGGCTCAAA+CGG + chr1_3:54576259-54576278 None:intergenic 55.0%
TCGATCGACGGGAACGTTCA+AGG - chr1_3:54576947-54576966 Msa0125830:intron 55.0%
TACTCTGACTTCCTCCACGG+CGG + chr1_3:54577089-54577108 None:intergenic 55.0%
! AGACGGATTCACTCTGCTGC+AGG + chr1_3:54577138-54577157 None:intergenic 55.0%
!! AAGGTTGTCGGTGACGGAGA+CGG + chr1_3:54577155-54577174 None:intergenic 55.0%
GTCACGAAGGTTGTCGGTGA+CGG + chr1_3:54577161-54577180 None:intergenic 55.0%
CTCCTTCGAGTCTGTCACGA+AGG + chr1_3:54577174-54577193 None:intergenic 55.0%
CTTCGTGACAGACTCGAAGG+AGG - chr1_3:54577172-54577191 Msa0125830:CDS 55.0%
GACTCGAAGGAGGATCTGAC+CGG - chr1_3:54577182-54577201 Msa0125830:CDS 55.0%
GTTGCGTCGGAGAGTGATTG+TGG - chr1_3:54577206-54577225 Msa0125830:CDS 55.0%
CGGAGAGTGATTGTGGTGAG+TGG - chr1_3:54577213-54577232 Msa0125830:CDS 55.0%
GAATCGGAAACTGTCTCCGG+TGG - chr1_3:54577269-54577288 Msa0125830:CDS 55.0%
GTTGCCGACGTGGCAATTAC+CGG - chr1_3:54577316-54577335 Msa0125830:CDS 55.0%
AAAGGAGCGACAGTGGTGAC+TGG - chr1_3:54577362-54577381 Msa0125830:CDS 55.0%
GCAACGGAGCTAGGCTCAAA+CGG + chr1_3:54576259-54576278 None:intergenic 55.0%
TCGATCGACGGGAACGTTCA+AGG - chr1_3:54576947-54576966 Msa0125830:intron 55.0%
TACTCTGACTTCCTCCACGG+CGG + chr1_3:54577089-54577108 None:intergenic 55.0%
! AGACGGATTCACTCTGCTGC+AGG + chr1_3:54577138-54577157 None:intergenic 55.0%
!! AAGGTTGTCGGTGACGGAGA+CGG + chr1_3:54577155-54577174 None:intergenic 55.0%
GTCACGAAGGTTGTCGGTGA+CGG + chr1_3:54577161-54577180 None:intergenic 55.0%
CTCCTTCGAGTCTGTCACGA+AGG + chr1_3:54577174-54577193 None:intergenic 55.0%
CTTCGTGACAGACTCGAAGG+AGG - chr1_3:54577172-54577191 Msa0125830:CDS 55.0%
GACTCGAAGGAGGATCTGAC+CGG - chr1_3:54577182-54577201 Msa0125830:CDS 55.0%
GTTGCGTCGGAGAGTGATTG+TGG - chr1_3:54577206-54577225 Msa0125830:CDS 55.0%
CGGAGAGTGATTGTGGTGAG+TGG - chr1_3:54577213-54577232 Msa0125830:CDS 55.0%
GAATCGGAAACTGTCTCCGG+TGG - chr1_3:54577269-54577288 Msa0125830:CDS 55.0%
GTTGCCGACGTGGCAATTAC+CGG - chr1_3:54577316-54577335 Msa0125830:CDS 55.0%
AAAGGAGCGACAGTGGTGAC+TGG - chr1_3:54577362-54577381 Msa0125830:CDS 55.0%
CCGGCGAGTTTCACTATCGC+CGG + chr1_3:54575851-54575870 None:intergenic 60.0%
CCGGCGATAGTGAAACTCGC+CGG - chr1_3:54575848-54575867 Msa0125830:three_prime_UTR 60.0%
GAACACGTGGCGGCGATGAT+TGG + chr1_3:54575930-54575949 None:intergenic 60.0%
GGTTCATCGGACTTGTCGCC+GGG + chr1_3:54576238-54576257 None:intergenic 60.0%
CGGTTCATCGGACTTGTCGC+CGG + chr1_3:54576239-54576258 None:intergenic 60.0%
! CGATGCTGGTGACGCACTCA+AGG - chr1_3:54576444-54576463 Msa0125830:CDS 60.0%
CTCTCCGCAACACTCGCACA+AGG + chr1_3:54576579-54576598 None:intergenic 60.0%
GATCGTCACCGTCGTATCGG+AGG - chr1_3:54577025-54577044 Msa0125830:intron 60.0%
ACTCTGACTTCCTCCACGGC+GGG + chr1_3:54577088-54577107 None:intergenic 60.0%
CGGATTCACTCTGCTGCAGG+AGG + chr1_3:54577135-54577154 None:intergenic 60.0%
ATCACTCTCCGACGCAACGC+CGG + chr1_3:54577204-54577223 None:intergenic 60.0%
CCGGCGAGTTTCACTATCGC+CGG + chr1_3:54575851-54575870 None:intergenic 60.0%
CCGGCGATAGTGAAACTCGC+CGG - chr1_3:54575848-54575867 Msa0125830:three_prime_UTR 60.0%
GAACACGTGGCGGCGATGAT+TGG + chr1_3:54575930-54575949 None:intergenic 60.0%
GGTTCATCGGACTTGTCGCC+GGG + chr1_3:54576238-54576257 None:intergenic 60.0%
CGGTTCATCGGACTTGTCGC+CGG + chr1_3:54576239-54576258 None:intergenic 60.0%
! CGATGCTGGTGACGCACTCA+AGG - chr1_3:54576444-54576463 Msa0125830:CDS 60.0%
CTCTCCGCAACACTCGCACA+AGG + chr1_3:54576579-54576598 None:intergenic 60.0%
GATCGTCACCGTCGTATCGG+AGG - chr1_3:54577025-54577044 Msa0125830:intron 60.0%
ACTCTGACTTCCTCCACGGC+GGG + chr1_3:54577088-54577107 None:intergenic 60.0%
CGGATTCACTCTGCTGCAGG+AGG + chr1_3:54577135-54577154 None:intergenic 60.0%
ATCACTCTCCGACGCAACGC+CGG + chr1_3:54577204-54577223 None:intergenic 60.0%
GGAACTTCGCCGGCGACGAT+AGG + chr1_3:54576211-54576230 None:intergenic 65.0%
GCCGGCGAAGTTCCACTTCC+CGG - chr1_3:54576217-54576236 Msa0125830:CDS 65.0%
GCCGGGAAGTGGAACTTCGC+CGG + chr1_3:54576221-54576240 None:intergenic 65.0%
TCGGACTTGTCGCCGGGAAG+TGG + chr1_3:54576232-54576251 None:intergenic 65.0%
CGTCACCGTCGTATCGGAGG+CGG - chr1_3:54577028-54577047 Msa0125830:intron 65.0%
CTTCGCCGCCTCCGATACGA+CGG + chr1_3:54577036-54577055 None:intergenic 65.0%
AAGGAATGCCTGTCCCGCCG+TGG - chr1_3:54577072-54577091 Msa0125830:CDS 65.0%
GGATCTGACCGGCGTTGCGT+CGG - chr1_3:54577193-54577212 Msa0125830:CDS 65.0%
CACGTCGGCAACACCACCGT+CGG + chr1_3:54577308-54577327 None:intergenic 65.0%
GGAACTTCGCCGGCGACGAT+AGG + chr1_3:54576211-54576230 None:intergenic 65.0%
GCCGGCGAAGTTCCACTTCC+CGG - chr1_3:54576217-54576236 Msa0125830:CDS 65.0%
GCCGGGAAGTGGAACTTCGC+CGG + chr1_3:54576221-54576240 None:intergenic 65.0%
TCGGACTTGTCGCCGGGAAG+TGG + chr1_3:54576232-54576251 None:intergenic 65.0%
CGTCACCGTCGTATCGGAGG+CGG - chr1_3:54577028-54577047 Msa0125830:intron 65.0%
CTTCGCCGCCTCCGATACGA+CGG + chr1_3:54577036-54577055 None:intergenic 65.0%
AAGGAATGCCTGTCCCGCCG+TGG - chr1_3:54577072-54577091 Msa0125830:CDS 65.0%
GGATCTGACCGGCGTTGCGT+CGG - chr1_3:54577193-54577212 Msa0125830:CDS 65.0%
CACGTCGGCAACACCACCGT+CGG + chr1_3:54577308-54577327 None:intergenic 65.0%
GAATGCCTGTCCCGCCGTGG+AGG - chr1_3:54577075-54577094 Msa0125830:CDS 70.0%
GACTTCCTCCACGGCGGGAC+AGG + chr1_3:54577083-54577102 None:intergenic 70.0%
!! CGACGGTGGTGTTGCCGACG+TGG - chr1_3:54577306-54577325 Msa0125830:CDS 70.0%
GAATGCCTGTCCCGCCGTGG+AGG - chr1_3:54577075-54577094 Msa0125830:CDS 70.0%
GACTTCCTCCACGGCGGGAC+AGG + chr1_3:54577083-54577102 None:intergenic 70.0%
!! CGACGGTGGTGTTGCCGACG+TGG - chr1_3:54577306-54577325 Msa0125830:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 54575773 54577724 54575773 ID=Msa0125830;Name=Msa0125830
chr1_3 mRNA 54575773 54577724 54575773 ID=Msa0125830-mRNA-1;Parent=Msa0125830;Name=Msa0125830-mRNA-1;_AED=0.03;_eAED=0.03;_QI=267|1|1|1|1|1|3|321|385
chr1_3 exon 54575773 54576632 54575773 ID=Msa0125830-mRNA-1:exon:16850;Parent=Msa0125830-mRNA-1
chr1_3 exon 54576738 54576930 54576738 ID=Msa0125830-mRNA-1:exon:16849;Parent=Msa0125830-mRNA-1
chr1_3 exon 54577032 54577724 54577032 ID=Msa0125830-mRNA-1:exon:16848;Parent=Msa0125830-mRNA-1
chr1_3 five_prime_UTR 54577458 54577724 54577458 ID=Msa0125830-mRNA-1:five_prime_utr;Parent=Msa0125830-mRNA-1
chr1_3 CDS 54577032 54577457 54577032 ID=Msa0125830-mRNA-1:cds;Parent=Msa0125830-mRNA-1
chr1_3 CDS 54576738 54576930 54576738 ID=Msa0125830-mRNA-1:cds;Parent=Msa0125830-mRNA-1
chr1_3 CDS 54576094 54576632 54576094 ID=Msa0125830-mRNA-1:cds;Parent=Msa0125830-mRNA-1
chr1_3 three_prime_UTR 54575773 54576093 54575773 ID=Msa0125830-mRNA-1:three_prime_utr;Parent=Msa0125830-mRNA-1
Gene Sequence

>Msa0125830

ATGTCTCCGATGAAGATCCAACCGATCGACATCGATTCAGAGAAGTTAGCCGTGGTTGTTCGAAACGACGTCGTTAAGCCTGTGTTGAAATCTCGTCTGAAAAGACTCTTCGTGTTCGACCGGCAGTTTTCAAACGCGTCAAAAACTTCCACTAACTTCTCAGAGAAACCTATCGTCGCCGGCGAAGTTCCACTTCCCGGCGACAAGTCCGATGAACCGTTTGAGCCTAGCTCCGTTGCCTTAGCAAAAATGGTGCAGAGTTTCATCGAAGAGAGTAACGAGAAACAAAATCCAGTCTCAAAACTCACTCGCAATAGATGCAACTGCTTTAACGGTAACAGTAACGATAGCTCCGACGAAGAACTTGATTTCTTCGGAGAATCTATCGCTACTGGTTCTTTCAACGATGCTGGTGACGCACTCAAGAGTTTAATACCTTGTGCGAGTGTTGCGGAGAGAAATCTCTTAGCTGATGCATCCAAAATAGTTGACAAAAACAGTAAAGTTTTCAAAGGAAAAAATGATTTGAGAAAAATCGTTGCAGAAAATCTTCAATCTCTAGGTTACGATTCTTCGATTTGCAAATCGAAATGGCACAAAACAAAATCTCATCCAGCTGGTGACTATGAATATATCGATGTGTTTGTGGAAGGTGAGAGGTTGATCATTGATATTGATTTTCGTTCGGAGTTTGAGATTGCTCGATCGACGGGAACGTTCAAGGCGATTCTTCAGTTTCTTCCTTACATTTTCGTCGGGAAATCGGATCGTCTCCGTCAGATCGTCACCGTCGTATCGGAGGCGGCGAAGCAGAGTTTGAAGAAGAAAGGAATGCCTGTCCCGCCGTGGAGGAAGTCAGAGTATATGGTAGCTAAGTGGCTCTCAACCTCCTGCAGCAGAGTGAATCCGTCTCCGTCACCGACAACCTTCGTGACAGACTCGAAGGAGGATCTGACCGGCGTTGCGTCGGAGAGTGATTGTGGTGAGTGGGAACTGATCTTCGGTGAGAAAATATCTTTGCAGGAATCGGAAACTGTCTCCGGTGGTGAGAAAATCTCACCGACGGTGGTGTTGCCGACGTGGCAATTACCGGAAGTGAAAGTAAAGAGTGTTGAGAAAGGAGCGACAGTGGTGACTGGATTTAGCCTCAAACCATAG
Protein sequence

>Msa0125830

MSPMKIQPIDIDSEKLAVVVRNDVVKPVLKSRLKRLFVFDRQFSNASKTSTNFSEKPIVAGEVPLPGDKSDEPFEPSSVALAKMVQSFIEESNEKQNPVSKLTRNRCNCFNGNSNDSSDEELDFFGESIATGSFNDAGDALKSLIPCASVAERNLLADASKIVDKNSKVFKGKNDLRKIVAENLQSLGYDSSICKSKWHKTKSHPAGDYEYIDVFVEGERLIIDIDFRSEFEIARSTGTFKAILQFLPYIFVGKSDRLRQIVTVVSEAAKQSLKKKGMPVPPWRKSEYMVAKWLSTSCSRVNPSPSPTTFVTDSKEDLTGVASESDCGEWELIFGEKISLQESETVSGGEKISPTVVLPTWQLPEVKVKSVEKGATVVTGFSLKP*