AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0030350

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030350 MtrunA17_Chr1g0188091 95.065 385 18 1 1 385 1 384 0.0 741
Msa0030350 MtrunA17_Chr1g0166241 56.883 385 128 11 1 382 1 350 6.16e-130 377
Msa0030350 MtrunA17_Chr1g0184881 50.904 387 136 14 4 383 5 344 1.89e-103 309
Msa0030350 MtrunA17_Chr7g0260551 49.741 386 146 15 4 382 5 349 9.15e-100 300
Msa0030350 MtrunA17_Chr7g0251511 45.578 147 74 2 174 315 129 274 1.08e-36 135
Msa0030350 MtrunA17_Chr4g0075591 42.975 121 69 0 176 296 118 238 1.38e-33 126
Msa0030350 MtrunA17_Chr4g0075611 42.063 126 73 0 171 296 131 256 1.62e-33 126
Msa0030350 MtrunA17_Chr8g0384101 39.024 164 85 4 160 310 60 221 2.33e-32 122
Msa0030350 MtrunA17_Chr2g0289701 46.018 113 61 0 184 296 142 254 3.93e-31 120
Msa0030350 MtrunA17_Chr2g0282301 39.716 141 77 4 173 307 140 278 4.46e-29 115
Msa0030350 MtrunA17_Chr4g0040171 37.324 142 80 3 180 314 123 262 3.69e-28 112
Msa0030350 MtrunA17_Chr7g0234691 31.064 235 130 7 79 303 92 304 5.48e-26 107
Msa0030350 MtrunA17_Chr4g0047231 36.220 127 75 2 174 294 147 273 8.86e-26 106
Msa0030350 MtrunA17_Chr4g0047221 37.190 121 70 2 180 294 206 326 1.40e-25 106
Msa0030350 MtrunA17_Chr8g0339051 28.205 234 146 5 77 303 47 265 1.38e-24 102
Msa0030350 MtrunA17_Chr5g0396281 35.252 139 79 2 176 308 97 230 1.97e-24 100
Msa0030350 MtrunA17_Chr2g0282311 30.719 153 99 3 173 319 140 291 4.34e-23 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0030350 AT3G22970.1 60.831 337 117 8 4 337 5 329 1.76e-118 348
Msa0030350 AT4G14620.1 51.804 388 125 14 4 383 2 335 1.34e-105 315
Msa0030350 AT2G38820.2 50.505 297 121 10 4 296 5 279 3.86e-87 266
Msa0030350 AT3G22970.2 62.437 197 73 1 141 337 23 218 5.63e-74 231
Msa0030350 AT3G54550.1 42.568 296 131 9 5 295 6 267 5.60e-63 204
Msa0030350 AT2G38820.1 44.550 211 85 11 4 207 5 190 5.78e-36 131
Msa0030350 AT2G39650.2 41.045 134 73 1 176 303 48 181 9.19e-32 120
Msa0030350 AT2G39650.1 41.045 134 73 1 176 303 110 243 1.97e-31 121
Msa0030350 AT3G07350.1 39.568 139 78 1 176 308 135 273 2.24e-31 121
Msa0030350 AT4G32480.1 39.355 155 82 4 176 324 116 264 1.56e-30 118
Msa0030350 AT1G77160.1 33.149 181 100 3 141 300 42 222 1.79e-30 117
Msa0030350 AT1G77145.1 39.189 148 72 2 173 302 72 219 1.01e-29 115
Msa0030350 AT1G77160.2 39.041 146 71 2 173 300 22 167 1.12e-29 114
Msa0030350 AT3G25240.1 40.940 149 78 3 155 294 93 240 6.80e-29 114
Msa0030350 AT2G20670.1 39.394 132 72 3 176 300 117 247 5.32e-27 109
Msa0030350 AT1G12030.1 34.177 158 97 4 139 295 79 230 8.94e-25 103
Msa0030350 AT1G62420.1 31.325 166 110 2 133 295 66 230 9.60e-25 102
Msa0030350 AT1G77145.2 44.231 104 48 1 209 302 59 162 1.91e-23 97.4

Find 104 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTATTAGCGTTCTGGATT+AGG 0.250555 1_1:+56617744 None:intergenic
GGCGAGACGTGCATTGTTAA+TGG 0.255163 1_1:+56617608 None:intergenic
ACGGGATGTAATAATGAAAA+TGG 0.290817 1_1:-56615922 Msa0030350:three_prime_UTR
CGGTGAGAAAATATCTTTGC+AGG 0.298776 1_1:-56616267 Msa0030350:CDS
TATCTTCTCTATTAGCGTTC+TGG 0.320600 1_1:+56617738 None:intergenic
AATAGATGCAACTGCTTTAA+CGG 0.345730 1_1:-56617162 Msa0030350:CDS
GTGGTAATGACTACTGTTTA+TGG 0.349845 1_1:+56615943 None:intergenic
CTTCGATTTGCAAATCGAAA+TGG 0.365715 1_1:-56616802 Msa0030350:CDS
GACTTCCTCCACGGCGGGAC+AGG 0.368324 1_1:+56616434 None:intergenic
GTGGAGGAAGTCAGAGTATA+TGG 0.390934 1_1:-56616423 Msa0030350:CDS
GAAAATATCTTTGCAGGAAT+CGG 0.392848 1_1:-56616261 Msa0030350:CDS
ACACTCTTTACTTTCACTTC+CGG 0.395441 1_1:+56616179 None:intergenic
TTTGAGATTGCTCGATCGAC+GGG 0.423911 1_1:-56616578 Msa0030350:CDS
CGCCGGAATGTTCATTTCAC+CGG 0.425304 1_1:+56617647 None:intergenic
TTCGGAGAATCTATCGCTAC+TGG 0.430931 1_1:-56617102 Msa0030350:CDS
GACGAAGAACTTGATTTCTT+CGG 0.430952 1_1:-56617120 Msa0030350:CDS
TTTCCTTCTTCTATGGTTTG+AGG 0.431240 1_1:+56616123 None:intergenic
TGTATTTCCTTTGAAACAAA+GGG 0.434432 1_1:-56615982 Msa0030350:three_prime_UTR
GAACACGTGGCGGCGATGAT+TGG 0.434740 1_1:+56617587 None:intergenic
GCCGGCGAAGTTCCACTTCC+CGG 0.448391 1_1:-56617297 Msa0030350:CDS
GCAGAAAATCTTCAATCTCT+AGG 0.452854 1_1:-56616833 Msa0030350:CDS
TTTGCTAAGGCAACGGAGCT+AGG 0.455852 1_1:+56617249 None:intergenic
GGTTCATCGGACTTGTCGCC+GGG 0.456543 1_1:+56617279 None:intergenic
ACAGAGTCCCTTTGTTTCAA+AGG 0.458771 1_1:+56615975 None:intergenic
CAATAGAACAAACACATTGC+CGG 0.458931 1_1:-56617685 Msa0030350:five_prime_UTR
GAGTCTGTCACGAAGGTTGT+CGG 0.460032 1_1:+56616350 None:intergenic
TCGGACTTGTCGCCGGGAAG+TGG 0.462109 1_1:+56617285 None:intergenic
AAAGGAGCGACAGTGGTGAC+TGG 0.464611 1_1:-56616152 Msa0030350:CDS
GTTGCCGACGTGGCAATTAC+CGG 0.465887 1_1:-56616198 Msa0030350:CDS
AGGTTTCTCTGAGAAGTTAG+TGG 0.470712 1_1:+56617326 None:intergenic
TGAATATATCGATGTGTTTG+TGG 0.473335 1_1:-56616642 Msa0030350:CDS
AAAGTAAAGAGTGTTGAGAA+AGG 0.492470 1_1:-56616170 Msa0030350:CDS
GTTTGAGATTGCTCGATCGA+CGG 0.495268 1_1:-56616579 Msa0030350:CDS
TCGATCGACGGGAACGTTCA+AGG 0.497302 1_1:-56616567 Msa0030350:CDS
AAAGCATAATCAAAATCAAA+AGG 0.501310 1_1:-56616066 Msa0030350:three_prime_UTR
CGCCGGTGAAATGAACATTC+CGG 0.504576 1_1:-56617649 Msa0030350:five_prime_UTR
TTGTATTTCCTTTGAAACAA+AGG 0.510341 1_1:-56615983 Msa0030350:three_prime_UTR
AAGCAGAGTTTGAAGAAGAA+AGG 0.517627 1_1:-56616461 Msa0030350:CDS
CTGAATCGATGTCGATCGGT+TGG 0.517827 1_1:+56617457 None:intergenic
GCAACGGAGCTAGGCTCAAA+CGG 0.518520 1_1:+56617258 None:intergenic
CGGTTCATCGGACTTGTCGC+CGG 0.521847 1_1:+56617278 None:intergenic
AGTAACCTTGAGTGCGTCAC+CGG 0.532317 1_1:+56617065 None:intergenic
TAGCCTCAAACCATAGAAGA+AGG 0.535681 1_1:-56616126 Msa0030350:exon
GATTTCCCGACGAAAATGTA+AGG 0.537019 1_1:+56616527 None:intergenic
GTCACGAAGGTTGTCGGTGA+CGG 0.537918 1_1:+56616356 None:intergenic
GCCGGGAAGTGGAACTTCGC+CGG 0.539650 1_1:+56617296 None:intergenic
CGACGGTGGTGTTGCCGACG+TGG 0.539789 1_1:-56616208 Msa0030350:CDS
CAGGAATCGGAAACTGTCTC+CGG 0.542143 1_1:-56616248 Msa0030350:CDS
AAAGACTCTTCGTGTTCGAC+CGG 0.544489 1_1:-56617374 Msa0030350:CDS
ACTGGTTCTTTCAACGATGC+CGG 0.549073 1_1:-56617084 Msa0030350:CDS
GGAACTTCGCCGGCGACGAT+AGG 0.549626 1_1:+56617306 None:intergenic
CGATGCCGGTGACGCACTCA+AGG 0.551605 1_1:-56617070 Msa0030350:intron
GCTAGGCTCAAACGGTTCAT+CGG 0.551711 1_1:+56617266 None:intergenic
CCGGCGAGTTTCACTATCGC+CGG 0.560249 1_1:+56617666 None:intergenic
TTGACGCGTTTGAAAACTGC+CGG 0.562462 1_1:+56617355 None:intergenic
TGTTGAGAAAGGAGCGACAG+TGG 0.564434 1_1:-56616159 Msa0030350:CDS
AATACCTTGTGCGAGTGTTG+CGG 0.566333 1_1:-56616942 Msa0030350:CDS
TTCAGACGAGATTTCAACAC+AGG 0.566428 1_1:+56617396 None:intergenic
TCAGATCGTCACCGTCGTAT+CGG 0.567992 1_1:-56616492 Msa0030350:CDS
CGTCACCGTCGTATCGGAGG+CGG 0.569275 1_1:-56616486 Msa0030350:CDS
AGACGGATTCACTCTGCTGC+AGG 0.574879 1_1:+56616379 None:intergenic
ATCACTCTCCGACGCAACGC+CGG 0.579926 1_1:+56616313 None:intergenic
GACTCGAAGGAGGATCTGAC+CGG 0.581417 1_1:-56616332 Msa0030350:CDS
TTCTCTGAATCGATGTCGAT+CGG 0.583729 1_1:+56617453 None:intergenic
GGTGAGTGGGAACTGATCTT+CGG 0.586732 1_1:-56616287 Msa0030350:CDS
CGGAGAGTGATTGTGGTGAG+TGG 0.590871 1_1:-56616301 Msa0030350:CDS
GAATGCCTGTCCCGCCGTGG+AGG 0.591996 1_1:-56616439 Msa0030350:CDS
AAAACAAAATCTCATCCAGC+TGG 0.593313 1_1:-56616776 Msa0030350:intron
GGATCTGACCGGCGTTGCGT+CGG 0.593452 1_1:-56616321 Msa0030350:CDS
AACCTTCGTGACAGACTCGA+AGG 0.593595 1_1:-56616345 Msa0030350:CDS
AAGGTTGTCGGTGACGGAGA+CGG 0.594096 1_1:+56616362 None:intergenic
TGCACTACAGTATTATCTCG+TGG 0.598652 1_1:+56617565 None:intergenic
ACTCTGACTTCCTCCACGGC+GGG 0.602994 1_1:+56616429 None:intergenic
ATGTGTTTGTGGAAGGTGAG+AGG 0.604456 1_1:-56616631 Msa0030350:CDS
CGGATTCACTCTGCTGCAGG+AGG 0.617962 1_1:+56616382 None:intergenic
GTATTATCTCGTGGAACACG+TGG 0.621242 1_1:+56617574 None:intergenic
CAGAGTATATGGTAGCTAAG+TGG 0.623568 1_1:-56616412 Msa0030350:CDS
CTCCTTCGAGTCTGTCACGA+AGG 0.623645 1_1:+56616343 None:intergenic
GTTGCGTCGGAGAGTGATTG+TGG 0.627922 1_1:-56616308 Msa0030350:CDS
GAAGAAATCAAGTTCTTCGT+CGG 0.630193 1_1:+56617122 None:intergenic
AAGGAATGCCTGTCCCGCCG+TGG 0.630360 1_1:-56616442 Msa0030350:CDS
CTCTCCGCAACACTCGCACA+AGG 0.630481 1_1:+56616938 None:intergenic
GGAGAGTGATTGTGGTGAGT+GGG 0.630723 1_1:-56616300 Msa0030350:CDS
TCAGAGAAACCTATCGTCGC+CGG 0.637917 1_1:-56617315 Msa0030350:CDS
GATCGTCACCGTCGTATCGG+AGG 0.639360 1_1:-56616489 Msa0030350:CDS
CTTCGCCGCCTCCGATACGA+CGG 0.640176 1_1:+56616481 None:intergenic
ATATACTCTGACTTCCTCCA+CGG 0.643784 1_1:+56616425 None:intergenic
ATACGACGGTGACGATCTGA+CGG 0.644479 1_1:+56616495 None:intergenic
CCGGCGATAGTGAAACTCGC+CGG 0.645620 1_1:-56617666 Msa0030350:five_prime_UTR
CGATTCAGAGAAGTTAGCCG+TGG 0.646198 1_1:-56617442 Msa0030350:CDS
TATATCGATGTGTTTGTGGA+AGG 0.646530 1_1:-56616638 Msa0030350:CDS
TAAACAGTAGTCATTACCAC+GGG 0.649655 1_1:-56615940 Msa0030350:three_prime_UTR
TCGATCGGTTGGATCTTCAT+CGG 0.650602 1_1:+56617468 None:intergenic
CACGTCGGCAACACCACCGT+CGG 0.653432 1_1:+56616209 None:intergenic
GAATCGGAAACTGTCTCCGG+TGG 0.655145 1_1:-56616245 Msa0030350:CDS
ACTTCCGGTAATTGCCACGT+CGG 0.655991 1_1:+56616194 None:intergenic
TACTCTGACTTCCTCCACGG+CGG 0.656636 1_1:+56616428 None:intergenic
TGGTGAGAAAATCTCACCGA+CGG 0.675741 1_1:-56616225 Msa0030350:CDS
ATAAACAGTAGTCATTACCA+CGG 0.694310 1_1:-56615941 Msa0030350:three_prime_UTR
AAAACAAAGAGAAATCCGAA+AGG 0.696222 1_1:+56616012 None:intergenic
TTATCTCGTGGAACACGTGG+CGG 0.703524 1_1:+56617577 None:intergenic
CTTCGTGACAGACTCGAAGG+AGG 0.707524 1_1:-56616342 Msa0030350:CDS
TGAGAAAATCTCACCGACGG+TGG 0.711396 1_1:-56616222 Msa0030350:CDS
GACGTCGTTTCGAACAACCA+CGG 0.725989 1_1:+56617425 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTTATTTAAATTTT+TGG - chr1_1:56616824-56616843 Msa0030350:CDS 0.0%
!!! AAATTTTTTATTTAAATTTT+TGG - chr1_1:56616824-56616843 Msa0030350:CDS 0.0%
!! AAAAAATTTCAAAAAAATTG+GGG + chr1_1:56616813-56616832 None:intergenic 10.0%
!! AAAAAATTTCAAAAAAATTG+GGG + chr1_1:56616813-56616832 None:intergenic 10.0%
!!! AACATTCAATTTTTCAAATT+AGG + chr1_1:56616864-56616883 None:intergenic 15.0%
!!! TTAGTTTAATTTTTACCTTT+CGG - chr1_1:56617527-56617546 Msa0030350:five_prime_UTR 15.0%
!!! AACATTCAATTTTTCAAATT+AGG + chr1_1:56616864-56616883 None:intergenic 15.0%
!!! TTAGTTTAATTTTTACCTTT+CGG - chr1_1:56617527-56617546 Msa0030350:five_prime_UTR 15.0%
!! TATTAAACTCTGCATAAAAA+AGG + chr1_1:56616596-56616615 None:intergenic 20.0%
!!! AAAAACAGTAAAGTTTTCAA+AGG - chr1_1:56616673-56616692 Msa0030350:intron 20.0%
!! ATTTGAAAAATTGAATGTTG+TGG - chr1_1:56616865-56616884 Msa0030350:CDS 20.0%
!! AAAGCATAATCAAAATCAAA+AGG - chr1_1:56617488-56617507 Msa0030350:exon 20.0%
!! TATTAAACTCTGCATAAAAA+AGG + chr1_1:56616596-56616615 None:intergenic 20.0%
!!! AAAAACAGTAAAGTTTTCAA+AGG - chr1_1:56616673-56616692 Msa0030350:intron 20.0%
!! ATTTGAAAAATTGAATGTTG+TGG - chr1_1:56616865-56616884 Msa0030350:CDS 20.0%
!! AAAGCATAATCAAAATCAAA+AGG - chr1_1:56617488-56617507 Msa0030350:exon 20.0%
!!! ACTGTTTTTGTCAACTATTT+TGG + chr1_1:56616662-56616681 None:intergenic 25.0%
!!! CATTGATATTGATTTTCGTT+CGG - chr1_1:56616951-56616970 Msa0030350:intron 25.0%
!!! TTGTATTTCCTTTGAAACAA+AGG - chr1_1:56617571-56617590 Msa0030350:five_prime_UTR 25.0%
!!! TGTATTTCCTTTGAAACAAA+GGG - chr1_1:56617572-56617591 Msa0030350:five_prime_UTR 25.0%
!!! ACTGTTTTTGTCAACTATTT+TGG + chr1_1:56616662-56616681 None:intergenic 25.0%
!!! CATTGATATTGATTTTCGTT+CGG - chr1_1:56616951-56616970 Msa0030350:intron 25.0%
!!! TTGTATTTCCTTTGAAACAA+AGG - chr1_1:56617571-56617590 Msa0030350:five_prime_UTR 25.0%
!!! TGTATTTCCTTTGAAACAAA+GGG - chr1_1:56617572-56617591 Msa0030350:five_prime_UTR 25.0%
AATAGATGCAACTGCTTTAA+CGG - chr1_1:56616392-56616411 Msa0030350:CDS 30.0%
!!! TGTGGTTTTGATTTTGATTC+AGG - chr1_1:56616883-56616902 Msa0030350:CDS 30.0%
TGAATATATCGATGTGTTTG+TGG - chr1_1:56616912-56616931 Msa0030350:CDS 30.0%
! TTTCTTCCTTACATTTTCGT+CGG - chr1_1:56617021-56617040 Msa0030350:intron 30.0%
GAAAATATCTTTGCAGGAAT+CGG - chr1_1:56617293-56617312 Msa0030350:CDS 30.0%
!! AAAGTAAAGAGTGTTGAGAA+AGG - chr1_1:56617384-56617403 Msa0030350:CDS 30.0%
! GCAAAATTTTCCTTCTTCTA+TGG + chr1_1:56617441-56617460 None:intergenic 30.0%
AAAACAAAGAGAAATCCGAA+AGG + chr1_1:56617545-56617564 None:intergenic 30.0%
!!! TTCGGATTTCTCTTTGTTTT+CGG - chr1_1:56617545-56617564 Msa0030350:five_prime_UTR 30.0%
ATAAACAGTAGTCATTACCA+CGG - chr1_1:56617613-56617632 Msa0030350:five_prime_UTR 30.0%
! ATTTTCATTATTACATCCCG+TGG + chr1_1:56617633-56617652 None:intergenic 30.0%
ACGGGATGTAATAATGAAAA+TGG - chr1_1:56617632-56617651 Msa0030350:five_prime_UTR 30.0%
AATAGATGCAACTGCTTTAA+CGG - chr1_1:56616392-56616411 Msa0030350:CDS 30.0%
!!! TGTGGTTTTGATTTTGATTC+AGG - chr1_1:56616883-56616902 Msa0030350:CDS 30.0%
TGAATATATCGATGTGTTTG+TGG - chr1_1:56616912-56616931 Msa0030350:CDS 30.0%
! TTTCTTCCTTACATTTTCGT+CGG - chr1_1:56617021-56617040 Msa0030350:intron 30.0%
GAAAATATCTTTGCAGGAAT+CGG - chr1_1:56617293-56617312 Msa0030350:CDS 30.0%
!! AAAGTAAAGAGTGTTGAGAA+AGG - chr1_1:56617384-56617403 Msa0030350:CDS 30.0%
! GCAAAATTTTCCTTCTTCTA+TGG + chr1_1:56617441-56617460 None:intergenic 30.0%
AAAACAAAGAGAAATCCGAA+AGG + chr1_1:56617545-56617564 None:intergenic 30.0%
!!! TTCGGATTTCTCTTTGTTTT+CGG - chr1_1:56617545-56617564 Msa0030350:five_prime_UTR 30.0%
ATAAACAGTAGTCATTACCA+CGG - chr1_1:56617613-56617632 Msa0030350:five_prime_UTR 30.0%
! ATTTTCATTATTACATCCCG+TGG + chr1_1:56617633-56617652 None:intergenic 30.0%
ACGGGATGTAATAATGAAAA+TGG - chr1_1:56617632-56617651 Msa0030350:five_prime_UTR 30.0%
TATCTTCTCTATTAGCGTTC+TGG + chr1_1:56615819-56615838 None:intergenic 35.0%
CAATAGAACAAACACATTGC+CGG - chr1_1:56615869-56615888 Msa0030350:three_prime_UTR 35.0%
GAAGAAATCAAGTTCTTCGT+CGG + chr1_1:56616435-56616454 None:intergenic 35.0%
GACGAAGAACTTGATTTCTT+CGG - chr1_1:56616434-56616453 Msa0030350:CDS 35.0%
GCAGAAAATCTTCAATCTCT+AGG - chr1_1:56616721-56616740 Msa0030350:intron 35.0%
! CTTCGATTTGCAAATCGAAA+TGG - chr1_1:56616752-56616771 Msa0030350:intron 35.0%
AAAACAAAATCTCATCCAGC+TGG - chr1_1:56616778-56616797 Msa0030350:CDS 35.0%
TATATCGATGTGTTTGTGGA+AGG - chr1_1:56616916-56616935 Msa0030350:CDS 35.0%
! TTCTTCCTTACATTTTCGTC+GGG - chr1_1:56617022-56617041 Msa0030350:intron 35.0%
! TTACATTTTCGTCGGGAAAT+CGG - chr1_1:56617029-56617048 Msa0030350:intron 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG - chr1_1:56617093-56617112 Msa0030350:CDS 35.0%
ACACTCTTTACTTTCACTTC+CGG + chr1_1:56617378-56617397 None:intergenic 35.0%
TTTCCTTCTTCTATGGTTTG+AGG + chr1_1:56617434-56617453 None:intergenic 35.0%
! GTGGTAATGACTACTGTTTA+TGG + chr1_1:56617614-56617633 None:intergenic 35.0%
TAAACAGTAGTCATTACCAC+GGG - chr1_1:56617614-56617633 Msa0030350:five_prime_UTR 35.0%
TATCTTCTCTATTAGCGTTC+TGG + chr1_1:56615819-56615838 None:intergenic 35.0%
CAATAGAACAAACACATTGC+CGG - chr1_1:56615869-56615888 Msa0030350:three_prime_UTR 35.0%
GAAGAAATCAAGTTCTTCGT+CGG + chr1_1:56616435-56616454 None:intergenic 35.0%
GACGAAGAACTTGATTTCTT+CGG - chr1_1:56616434-56616453 Msa0030350:CDS 35.0%
GCAGAAAATCTTCAATCTCT+AGG - chr1_1:56616721-56616740 Msa0030350:intron 35.0%
! CTTCGATTTGCAAATCGAAA+TGG - chr1_1:56616752-56616771 Msa0030350:intron 35.0%
AAAACAAAATCTCATCCAGC+TGG - chr1_1:56616778-56616797 Msa0030350:CDS 35.0%
TATATCGATGTGTTTGTGGA+AGG - chr1_1:56616916-56616935 Msa0030350:CDS 35.0%
! TTCTTCCTTACATTTTCGTC+GGG - chr1_1:56617022-56617041 Msa0030350:intron 35.0%
! TTACATTTTCGTCGGGAAAT+CGG - chr1_1:56617029-56617048 Msa0030350:intron 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG - chr1_1:56617093-56617112 Msa0030350:CDS 35.0%
ACACTCTTTACTTTCACTTC+CGG + chr1_1:56617378-56617397 None:intergenic 35.0%
TTTCCTTCTTCTATGGTTTG+AGG + chr1_1:56617434-56617453 None:intergenic 35.0%
! GTGGTAATGACTACTGTTTA+TGG + chr1_1:56617614-56617633 None:intergenic 35.0%
TAAACAGTAGTCATTACCAC+GGG - chr1_1:56617614-56617633 Msa0030350:five_prime_UTR 35.0%
GAAAAAGAAGAAACGTTCGC+CGG + chr1_1:56615927-56615946 None:intergenic 40.0%
TGCACTACAGTATTATCTCG+TGG + chr1_1:56615992-56616011 None:intergenic 40.0%
TTCTCTGAATCGATGTCGAT+CGG + chr1_1:56616104-56616123 None:intergenic 40.0%
TTCAGACGAGATTTCAACAC+AGG + chr1_1:56616161-56616180 None:intergenic 40.0%
! AGGTTTCTCTGAGAAGTTAG+TGG + chr1_1:56616231-56616250 None:intergenic 40.0%
!! CACCATTTTTGCTAAGGCAA+CGG + chr1_1:56616315-56616334 None:intergenic 40.0%
!! ACTCTGCACCATTTTTGCTA+AGG + chr1_1:56616321-56616340 None:intergenic 40.0%
GATTTCCCGACGAAAATGTA+AGG + chr1_1:56617030-56617049 None:intergenic 40.0%
ATATACTCTGACTTCCTCCA+CGG + chr1_1:56617132-56617151 None:intergenic 40.0%
CAGAGTATATGGTAGCTAAG+TGG - chr1_1:56617142-56617161 Msa0030350:CDS 40.0%
CGGTGAGAAAATATCTTTGC+AGG - chr1_1:56617287-56617306 Msa0030350:CDS 40.0%
TAGCCTCAAACCATAGAAGA+AGG - chr1_1:56617428-56617447 Msa0030350:CDS 40.0%
! ACAGAGTCCCTTTGTTTCAA+AGG + chr1_1:56617582-56617601 None:intergenic 40.0%
! CAAGCACGCATTTTTAACAG+TGG + chr1_1:56617680-56617699 None:intergenic 40.0%
GAAAAAGAAGAAACGTTCGC+CGG + chr1_1:56615927-56615946 None:intergenic 40.0%
TGCACTACAGTATTATCTCG+TGG + chr1_1:56615992-56616011 None:intergenic 40.0%
TTCTCTGAATCGATGTCGAT+CGG + chr1_1:56616104-56616123 None:intergenic 40.0%
TTCAGACGAGATTTCAACAC+AGG + chr1_1:56616161-56616180 None:intergenic 40.0%
! AGGTTTCTCTGAGAAGTTAG+TGG + chr1_1:56616231-56616250 None:intergenic 40.0%
!! CACCATTTTTGCTAAGGCAA+CGG + chr1_1:56616315-56616334 None:intergenic 40.0%
!! ACTCTGCACCATTTTTGCTA+AGG + chr1_1:56616321-56616340 None:intergenic 40.0%
GATTTCCCGACGAAAATGTA+AGG + chr1_1:56617030-56617049 None:intergenic 40.0%
ATATACTCTGACTTCCTCCA+CGG + chr1_1:56617132-56617151 None:intergenic 40.0%
CAGAGTATATGGTAGCTAAG+TGG - chr1_1:56617142-56617161 Msa0030350:CDS 40.0%
CGGTGAGAAAATATCTTTGC+AGG - chr1_1:56617287-56617306 Msa0030350:CDS 40.0%
TAGCCTCAAACCATAGAAGA+AGG - chr1_1:56617428-56617447 Msa0030350:CDS 40.0%
! ACAGAGTCCCTTTGTTTCAA+AGG + chr1_1:56617582-56617601 None:intergenic 40.0%
! CAAGCACGCATTTTTAACAG+TGG + chr1_1:56617680-56617699 None:intergenic 40.0%
GTATTATCTCGTGGAACACG+TGG + chr1_1:56615983-56616002 None:intergenic 45.0%
TCGATCGGTTGGATCTTCAT+CGG + chr1_1:56616089-56616108 None:intergenic 45.0%
AAAGACTCTTCGTGTTCGAC+CGG - chr1_1:56616180-56616199 Msa0030350:CDS 45.0%
TTGACGCGTTTGAAAACTGC+CGG + chr1_1:56616202-56616221 None:intergenic 45.0%
CTCCGTTGCCTTAGCAAAAA+TGG - chr1_1:56616310-56616329 Msa0030350:CDS 45.0%
!!! TTGCGAGTGAGTTTTGAGAC+TGG + chr1_1:56616374-56616393 None:intergenic 45.0%
TTCGGAGAATCTATCGCTAC+TGG - chr1_1:56616452-56616471 Msa0030350:CDS 45.0%
! ACTGGTTCTTTCAACGATGC+CGG - chr1_1:56616470-56616489 Msa0030350:CDS 45.0%
! AATACCTTGTGCGAGTGTTG+CGG - chr1_1:56616612-56616631 Msa0030350:CDS 45.0%
TTGGGGAAAAATGTACCAGC+TGG + chr1_1:56616796-56616815 None:intergenic 45.0%
ATGTGTTTGTGGAAGGTGAG+AGG - chr1_1:56616923-56616942 Msa0030350:CDS 45.0%
! GTTTGAGATTGCTCGATCGA+CGG - chr1_1:56616975-56616994 Msa0030350:intron 45.0%
! TTTGAGATTGCTCGATCGAC+GGG - chr1_1:56616976-56616995 Msa0030350:intron 45.0%
GTGGAGGAAGTCAGAGTATA+TGG - chr1_1:56617131-56617150 Msa0030350:CDS 45.0%
TGGTGAGAAAATCTCACCGA+CGG - chr1_1:56617329-56617348 Msa0030350:CDS 45.0%
GTATTATCTCGTGGAACACG+TGG + chr1_1:56615983-56616002 None:intergenic 45.0%
TCGATCGGTTGGATCTTCAT+CGG + chr1_1:56616089-56616108 None:intergenic 45.0%
AAAGACTCTTCGTGTTCGAC+CGG - chr1_1:56616180-56616199 Msa0030350:CDS 45.0%
TTGACGCGTTTGAAAACTGC+CGG + chr1_1:56616202-56616221 None:intergenic 45.0%
CTCCGTTGCCTTAGCAAAAA+TGG - chr1_1:56616310-56616329 Msa0030350:CDS 45.0%
!!! TTGCGAGTGAGTTTTGAGAC+TGG + chr1_1:56616374-56616393 None:intergenic 45.0%
TTCGGAGAATCTATCGCTAC+TGG - chr1_1:56616452-56616471 Msa0030350:CDS 45.0%
! ACTGGTTCTTTCAACGATGC+CGG - chr1_1:56616470-56616489 Msa0030350:CDS 45.0%
! AATACCTTGTGCGAGTGTTG+CGG - chr1_1:56616612-56616631 Msa0030350:CDS 45.0%
TTGGGGAAAAATGTACCAGC+TGG + chr1_1:56616796-56616815 None:intergenic 45.0%
ATGTGTTTGTGGAAGGTGAG+AGG - chr1_1:56616923-56616942 Msa0030350:CDS 45.0%
! GTTTGAGATTGCTCGATCGA+CGG - chr1_1:56616975-56616994 Msa0030350:intron 45.0%
! TTTGAGATTGCTCGATCGAC+GGG - chr1_1:56616976-56616995 Msa0030350:intron 45.0%
GTGGAGGAAGTCAGAGTATA+TGG - chr1_1:56617131-56617150 Msa0030350:CDS 45.0%
TGGTGAGAAAATCTCACCGA+CGG - chr1_1:56617329-56617348 Msa0030350:CDS 45.0%
!! TAAAAAATTTCAAAAAAATT+GGG + chr1_1:56616814-56616833 None:intergenic 5.0%
!! ATAAAAAATTTCAAAAAAAT+TGG + chr1_1:56616815-56616834 None:intergenic 5.0%
!! TAAAAAATTTCAAAAAAATT+GGG + chr1_1:56616814-56616833 None:intergenic 5.0%
!! ATAAAAAATTTCAAAAAAAT+TGG + chr1_1:56616815-56616834 None:intergenic 5.0%
CGCCGGTGAAATGAACATTC+CGG - chr1_1:56615905-56615924 Msa0030350:three_prime_UTR 50.0%
CGCCGGAATGTTCATTTCAC+CGG + chr1_1:56615910-56615929 None:intergenic 50.0%
GGCGAGACGTGCATTGTTAA+TGG + chr1_1:56615949-56615968 None:intergenic 50.0%
TTATCTCGTGGAACACGTGG+CGG + chr1_1:56615980-56615999 None:intergenic 50.0%
CTGAATCGATGTCGATCGGT+TGG + chr1_1:56616100-56616119 None:intergenic 50.0%
CGATTCAGAGAAGTTAGCCG+TGG - chr1_1:56616112-56616131 Msa0030350:three_prime_UTR 50.0%
GACGTCGTTTCGAACAACCA+CGG + chr1_1:56616132-56616151 None:intergenic 50.0%
TCAGAGAAACCTATCGTCGC+CGG - chr1_1:56616239-56616258 Msa0030350:CDS 50.0%
GCTAGGCTCAAACGGTTCAT+CGG + chr1_1:56616291-56616310 None:intergenic 50.0%
TTTGCTAAGGCAACGGAGCT+AGG + chr1_1:56616308-56616327 None:intergenic 50.0%
AGTAACCTTGAGTGCGTCAC+CGG + chr1_1:56616492-56616511 None:intergenic 50.0%
ATACGACGGTGACGATCTGA+CGG + chr1_1:56617062-56617081 None:intergenic 50.0%
TCAGATCGTCACCGTCGTAT+CGG - chr1_1:56617062-56617081 Msa0030350:intron 50.0%
GAGTCTGTCACGAAGGTTGT+CGG + chr1_1:56617207-56617226 None:intergenic 50.0%
AACCTTCGTGACAGACTCGA+AGG - chr1_1:56617209-56617228 Msa0030350:CDS 50.0%
GGAGAGTGATTGTGGTGAGT+GGG - chr1_1:56617254-56617273 Msa0030350:CDS 50.0%
GGTGAGTGGGAACTGATCTT+CGG - chr1_1:56617267-56617286 Msa0030350:CDS 50.0%
CAGGAATCGGAAACTGTCTC+CGG - chr1_1:56617306-56617325 Msa0030350:CDS 50.0%
! CGGTGAGATTTTCTCACCAC+CGG + chr1_1:56617328-56617347 None:intergenic 50.0%
TGAGAAAATCTCACCGACGG+TGG - chr1_1:56617332-56617351 Msa0030350:CDS 50.0%
ACTTCCGGTAATTGCCACGT+CGG + chr1_1:56617363-56617382 None:intergenic 50.0%
TGTTGAGAAAGGAGCGACAG+TGG - chr1_1:56617395-56617414 Msa0030350:CDS 50.0%
CGCCGGTGAAATGAACATTC+CGG - chr1_1:56615905-56615924 Msa0030350:three_prime_UTR 50.0%
CGCCGGAATGTTCATTTCAC+CGG + chr1_1:56615910-56615929 None:intergenic 50.0%
GGCGAGACGTGCATTGTTAA+TGG + chr1_1:56615949-56615968 None:intergenic 50.0%
TTATCTCGTGGAACACGTGG+CGG + chr1_1:56615980-56615999 None:intergenic 50.0%
CTGAATCGATGTCGATCGGT+TGG + chr1_1:56616100-56616119 None:intergenic 50.0%
CGATTCAGAGAAGTTAGCCG+TGG - chr1_1:56616112-56616131 Msa0030350:three_prime_UTR 50.0%
GACGTCGTTTCGAACAACCA+CGG + chr1_1:56616132-56616151 None:intergenic 50.0%
TCAGAGAAACCTATCGTCGC+CGG - chr1_1:56616239-56616258 Msa0030350:CDS 50.0%
GCTAGGCTCAAACGGTTCAT+CGG + chr1_1:56616291-56616310 None:intergenic 50.0%
TTTGCTAAGGCAACGGAGCT+AGG + chr1_1:56616308-56616327 None:intergenic 50.0%
AGTAACCTTGAGTGCGTCAC+CGG + chr1_1:56616492-56616511 None:intergenic 50.0%
ATACGACGGTGACGATCTGA+CGG + chr1_1:56617062-56617081 None:intergenic 50.0%
TCAGATCGTCACCGTCGTAT+CGG - chr1_1:56617062-56617081 Msa0030350:intron 50.0%
GAGTCTGTCACGAAGGTTGT+CGG + chr1_1:56617207-56617226 None:intergenic 50.0%
AACCTTCGTGACAGACTCGA+AGG - chr1_1:56617209-56617228 Msa0030350:CDS 50.0%
GGAGAGTGATTGTGGTGAGT+GGG - chr1_1:56617254-56617273 Msa0030350:CDS 50.0%
GGTGAGTGGGAACTGATCTT+CGG - chr1_1:56617267-56617286 Msa0030350:CDS 50.0%
CAGGAATCGGAAACTGTCTC+CGG - chr1_1:56617306-56617325 Msa0030350:CDS 50.0%
! CGGTGAGATTTTCTCACCAC+CGG + chr1_1:56617328-56617347 None:intergenic 50.0%
TGAGAAAATCTCACCGACGG+TGG - chr1_1:56617332-56617351 Msa0030350:CDS 50.0%
ACTTCCGGTAATTGCCACGT+CGG + chr1_1:56617363-56617382 None:intergenic 50.0%
TGTTGAGAAAGGAGCGACAG+TGG - chr1_1:56617395-56617414 Msa0030350:CDS 50.0%
GCAACGGAGCTAGGCTCAAA+CGG + chr1_1:56616299-56616318 None:intergenic 55.0%
TCGATCGACGGGAACGTTCA+AGG - chr1_1:56616987-56617006 Msa0030350:intron 55.0%
TACTCTGACTTCCTCCACGG+CGG + chr1_1:56617129-56617148 None:intergenic 55.0%
! AGACGGATTCACTCTGCTGC+AGG + chr1_1:56617178-56617197 None:intergenic 55.0%
!! AAGGTTGTCGGTGACGGAGA+CGG + chr1_1:56617195-56617214 None:intergenic 55.0%
GTCACGAAGGTTGTCGGTGA+CGG + chr1_1:56617201-56617220 None:intergenic 55.0%
CTCCTTCGAGTCTGTCACGA+AGG + chr1_1:56617214-56617233 None:intergenic 55.0%
CTTCGTGACAGACTCGAAGG+AGG - chr1_1:56617212-56617231 Msa0030350:CDS 55.0%
GACTCGAAGGAGGATCTGAC+CGG - chr1_1:56617222-56617241 Msa0030350:CDS 55.0%
GTTGCGTCGGAGAGTGATTG+TGG - chr1_1:56617246-56617265 Msa0030350:CDS 55.0%
CGGAGAGTGATTGTGGTGAG+TGG - chr1_1:56617253-56617272 Msa0030350:CDS 55.0%
GAATCGGAAACTGTCTCCGG+TGG - chr1_1:56617309-56617328 Msa0030350:CDS 55.0%
GTTGCCGACGTGGCAATTAC+CGG - chr1_1:56617356-56617375 Msa0030350:CDS 55.0%
AAAGGAGCGACAGTGGTGAC+TGG - chr1_1:56617402-56617421 Msa0030350:CDS 55.0%
GCAACGGAGCTAGGCTCAAA+CGG + chr1_1:56616299-56616318 None:intergenic 55.0%
TCGATCGACGGGAACGTTCA+AGG - chr1_1:56616987-56617006 Msa0030350:intron 55.0%
TACTCTGACTTCCTCCACGG+CGG + chr1_1:56617129-56617148 None:intergenic 55.0%
! AGACGGATTCACTCTGCTGC+AGG + chr1_1:56617178-56617197 None:intergenic 55.0%
!! AAGGTTGTCGGTGACGGAGA+CGG + chr1_1:56617195-56617214 None:intergenic 55.0%
GTCACGAAGGTTGTCGGTGA+CGG + chr1_1:56617201-56617220 None:intergenic 55.0%
CTCCTTCGAGTCTGTCACGA+AGG + chr1_1:56617214-56617233 None:intergenic 55.0%
CTTCGTGACAGACTCGAAGG+AGG - chr1_1:56617212-56617231 Msa0030350:CDS 55.0%
GACTCGAAGGAGGATCTGAC+CGG - chr1_1:56617222-56617241 Msa0030350:CDS 55.0%
GTTGCGTCGGAGAGTGATTG+TGG - chr1_1:56617246-56617265 Msa0030350:CDS 55.0%
CGGAGAGTGATTGTGGTGAG+TGG - chr1_1:56617253-56617272 Msa0030350:CDS 55.0%
GAATCGGAAACTGTCTCCGG+TGG - chr1_1:56617309-56617328 Msa0030350:CDS 55.0%
GTTGCCGACGTGGCAATTAC+CGG - chr1_1:56617356-56617375 Msa0030350:CDS 55.0%
AAAGGAGCGACAGTGGTGAC+TGG - chr1_1:56617402-56617421 Msa0030350:CDS 55.0%
CCGGCGAGTTTCACTATCGC+CGG + chr1_1:56615891-56615910 None:intergenic 60.0%
CCGGCGATAGTGAAACTCGC+CGG - chr1_1:56615888-56615907 Msa0030350:three_prime_UTR 60.0%
GAACACGTGGCGGCGATGAT+TGG + chr1_1:56615970-56615989 None:intergenic 60.0%
GGTTCATCGGACTTGTCGCC+GGG + chr1_1:56616278-56616297 None:intergenic 60.0%
CGGTTCATCGGACTTGTCGC+CGG + chr1_1:56616279-56616298 None:intergenic 60.0%
CTCTCCGCAACACTCGCACA+AGG + chr1_1:56616619-56616638 None:intergenic 60.0%
GATCGTCACCGTCGTATCGG+AGG - chr1_1:56617065-56617084 Msa0030350:intron 60.0%
ACTCTGACTTCCTCCACGGC+GGG + chr1_1:56617128-56617147 None:intergenic 60.0%
CGGATTCACTCTGCTGCAGG+AGG + chr1_1:56617175-56617194 None:intergenic 60.0%
ATCACTCTCCGACGCAACGC+CGG + chr1_1:56617244-56617263 None:intergenic 60.0%
CCGGCGAGTTTCACTATCGC+CGG + chr1_1:56615891-56615910 None:intergenic 60.0%
CCGGCGATAGTGAAACTCGC+CGG - chr1_1:56615888-56615907 Msa0030350:three_prime_UTR 60.0%
GAACACGTGGCGGCGATGAT+TGG + chr1_1:56615970-56615989 None:intergenic 60.0%
GGTTCATCGGACTTGTCGCC+GGG + chr1_1:56616278-56616297 None:intergenic 60.0%
CGGTTCATCGGACTTGTCGC+CGG + chr1_1:56616279-56616298 None:intergenic 60.0%
CTCTCCGCAACACTCGCACA+AGG + chr1_1:56616619-56616638 None:intergenic 60.0%
GATCGTCACCGTCGTATCGG+AGG - chr1_1:56617065-56617084 Msa0030350:intron 60.0%
ACTCTGACTTCCTCCACGGC+GGG + chr1_1:56617128-56617147 None:intergenic 60.0%
CGGATTCACTCTGCTGCAGG+AGG + chr1_1:56617175-56617194 None:intergenic 60.0%
ATCACTCTCCGACGCAACGC+CGG + chr1_1:56617244-56617263 None:intergenic 60.0%
GGAACTTCGCCGGCGACGAT+AGG + chr1_1:56616251-56616270 None:intergenic 65.0%
GCCGGCGAAGTTCCACTTCC+CGG - chr1_1:56616257-56616276 Msa0030350:CDS 65.0%
GCCGGGAAGTGGAACTTCGC+CGG + chr1_1:56616261-56616280 None:intergenic 65.0%
TCGGACTTGTCGCCGGGAAG+TGG + chr1_1:56616272-56616291 None:intergenic 65.0%
CGATGCCGGTGACGCACTCA+AGG - chr1_1:56616484-56616503 Msa0030350:CDS 65.0%
CGTCACCGTCGTATCGGAGG+CGG - chr1_1:56617068-56617087 Msa0030350:intron 65.0%
CTTCGCCGCCTCCGATACGA+CGG + chr1_1:56617076-56617095 None:intergenic 65.0%
AAGGAATGCCTGTCCCGCCG+TGG - chr1_1:56617112-56617131 Msa0030350:CDS 65.0%
GGATCTGACCGGCGTTGCGT+CGG - chr1_1:56617233-56617252 Msa0030350:CDS 65.0%
CACGTCGGCAACACCACCGT+CGG + chr1_1:56617348-56617367 None:intergenic 65.0%
GGAACTTCGCCGGCGACGAT+AGG + chr1_1:56616251-56616270 None:intergenic 65.0%
GCCGGCGAAGTTCCACTTCC+CGG - chr1_1:56616257-56616276 Msa0030350:CDS 65.0%
GCCGGGAAGTGGAACTTCGC+CGG + chr1_1:56616261-56616280 None:intergenic 65.0%
TCGGACTTGTCGCCGGGAAG+TGG + chr1_1:56616272-56616291 None:intergenic 65.0%
CGATGCCGGTGACGCACTCA+AGG - chr1_1:56616484-56616503 Msa0030350:CDS 65.0%
CGTCACCGTCGTATCGGAGG+CGG - chr1_1:56617068-56617087 Msa0030350:intron 65.0%
CTTCGCCGCCTCCGATACGA+CGG + chr1_1:56617076-56617095 None:intergenic 65.0%
AAGGAATGCCTGTCCCGCCG+TGG - chr1_1:56617112-56617131 Msa0030350:CDS 65.0%
GGATCTGACCGGCGTTGCGT+CGG - chr1_1:56617233-56617252 Msa0030350:CDS 65.0%
CACGTCGGCAACACCACCGT+CGG + chr1_1:56617348-56617367 None:intergenic 65.0%
GAATGCCTGTCCCGCCGTGG+AGG - chr1_1:56617115-56617134 Msa0030350:CDS 70.0%
GACTTCCTCCACGGCGGGAC+AGG + chr1_1:56617123-56617142 None:intergenic 70.0%
!! CGACGGTGGTGTTGCCGACG+TGG - chr1_1:56617346-56617365 Msa0030350:CDS 70.0%
GAATGCCTGTCCCGCCGTGG+AGG - chr1_1:56617115-56617134 Msa0030350:CDS 70.0%
GACTTCCTCCACGGCGGGAC+AGG + chr1_1:56617123-56617142 None:intergenic 70.0%
!! CGACGGTGGTGTTGCCGACG+TGG - chr1_1:56617346-56617365 Msa0030350:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 56615813 56617763 56615813 ID=Msa0030350;Name=Msa0030350
chr1_1 mRNA 56615813 56617763 56615813 ID=Msa0030350-mRNA-1;Parent=Msa0030350;Name=Msa0030350-mRNA-1;_AED=0.03;_eAED=0.03;_QI=267|1|1|1|1|1|3|320|385
chr1_1 exon 56615813 56616671 56615813 ID=Msa0030350-mRNA-1:exon:16959;Parent=Msa0030350-mRNA-1
chr1_1 exon 56616777 56616969 56616777 ID=Msa0030350-mRNA-1:exon:16958;Parent=Msa0030350-mRNA-1
chr1_1 exon 56617071 56617763 56617071 ID=Msa0030350-mRNA-1:exon:16957;Parent=Msa0030350-mRNA-1
chr1_1 five_prime_UTR 56617497 56617763 56617497 ID=Msa0030350-mRNA-1:five_prime_utr;Parent=Msa0030350-mRNA-1
chr1_1 CDS 56617071 56617496 56617071 ID=Msa0030350-mRNA-1:cds;Parent=Msa0030350-mRNA-1
chr1_1 CDS 56616777 56616969 56616777 ID=Msa0030350-mRNA-1:cds;Parent=Msa0030350-mRNA-1
chr1_1 CDS 56616133 56616671 56616133 ID=Msa0030350-mRNA-1:cds;Parent=Msa0030350-mRNA-1
chr1_1 three_prime_UTR 56615813 56616132 56615813 ID=Msa0030350-mRNA-1:three_prime_utr;Parent=Msa0030350-mRNA-1
Gene Sequence

>Msa0030350

ATGTCTCCGATGAAGATCCAACCGATCGACATCGATTCAGAGAAGTTAGCCGTGGTTGTTCGAAACGACGTCGTTAAGCCTGTGTTGAAATCTCGTCTGAAAAGACTCTTCGTGTTCGACCGGCAGTTTTCAAACGCGTCAAAAACTTCCACTAACTTCTCAGAGAAACCTATCGTCGCCGGCGAAGTTCCACTTCCCGGCGACAAGTCCGATGAACCGTTTGAGCCTAGCTCCGTTGCCTTAGCAAAAATGGTGCAGAGTTTCATCGAAGAGAGTAACGAGAAACAAAATCCAGTCTCAAAACTCACTCGCAATAGATGCAACTGCTTTAACGGTAACAGTAACGATAGCTCCGACGAAGAACTTGATTTCTTCGGAGAATCTATCGCTACTGGTTCTTTCAACGATGCCGGTGACGCACTCAAGAGTTTAATACCTTGTGCGAGTGTTGCGGAGAGAAATCTCTTAGCTGATGCATCCAAAATAGTTGACAAAAACAGTAAAGTTTTCAAAGGAAAAAATGATTTGAGAAAAATCGTTGCAGAAAATCTTCAATCTCTAGGTTACGATTCTTCGATTTGCAAATCGAAATGGCACAAAACAAAATCTCATCCAGCTGGTGACTATGAATATATCGATGTGTTTGTGGAAGGTGAGAGGTTGATCATTGATATTGATTTTCGTTCGGAGTTTGAGATTGCTCGATCGACGGGAACGTTCAAGGCGATTCTTCAGTTTCTTCCTTACATTTTCGTCGGGAAATCGGATCGTCTCCGTCAGATCGTCACCGTCGTATCGGAGGCGGCGAAGCAGAGTTTGAAGAAGAAAGGAATGCCTGTCCCGCCGTGGAGGAAGTCAGAGTATATGGTAGCTAAGTGGCTCTCAACCTCCTGCAGCAGAGTGAATCCGTCTCCGTCACCGACAACCTTCGTGACAGACTCGAAGGAGGATCTGACCGGCGTTGCGTCGGAGAGTGATTGTGGTGAGTGGGAACTGATCTTCGGTGAGAAAATATCTTTGCAGGAATCGGAAACTGTCTCCGGTGGTGAGAAAATCTCACCGACGGTGGTGTTGCCGACGTGGCAATTACCGGAAGTGAAAGTAAAGAGTGTTGAGAAAGGAGCGACAGTGGTGACTGGATTTAGCCTCAAACCATAG
Protein sequence

>Msa0030350

MSPMKIQPIDIDSEKLAVVVRNDVVKPVLKSRLKRLFVFDRQFSNASKTSTNFSEKPIVAGEVPLPGDKSDEPFEPSSVALAKMVQSFIEESNEKQNPVSKLTRNRCNCFNGNSNDSSDEELDFFGESIATGSFNDAGDALKSLIPCASVAERNLLADASKIVDKNSKVFKGKNDLRKIVAENLQSLGYDSSICKSKWHKTKSHPAGDYEYIDVFVEGERLIIDIDFRSEFEIARSTGTFKAILQFLPYIFVGKSDRLRQIVTVVSEAAKQSLKKKGMPVPPWRKSEYMVAKWLSTSCSRVNPSPSPTTFVTDSKEDLTGVASESDCGEWELIFGEKISLQESETVSGGEKISPTVVLPTWQLPEVKVKSVEKGATVVTGFSLKP*