AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0077950

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0077950 MtrunA17_Chr1g0188091 95.325 385 17 1 1 385 1 384 0.0 744
Msa0077950 MtrunA17_Chr1g0166241 57.143 385 127 11 1 382 1 350 6.24e-131 379
Msa0077950 MtrunA17_Chr1g0184881 50.646 387 137 14 4 383 5 344 1.19e-102 307
Msa0077950 MtrunA17_Chr7g0260551 49.482 386 147 15 4 382 5 349 5.02e-99 298
Msa0077950 MtrunA17_Chr7g0251511 45.578 147 74 2 174 315 129 274 9.88e-37 135
Msa0077950 MtrunA17_Chr4g0075591 42.975 121 69 0 176 296 118 238 1.30e-33 126
Msa0077950 MtrunA17_Chr4g0075611 42.063 126 73 0 171 296 131 256 1.56e-33 127
Msa0077950 MtrunA17_Chr8g0384101 39.024 164 85 4 160 310 60 221 2.30e-32 122
Msa0077950 MtrunA17_Chr2g0289701 46.018 113 61 0 184 296 142 254 3.86e-31 120
Msa0077950 MtrunA17_Chr2g0282301 39.716 141 77 4 173 307 140 278 4.20e-29 115
Msa0077950 MtrunA17_Chr4g0040171 37.324 142 80 3 180 314 123 262 3.62e-28 112
Msa0077950 MtrunA17_Chr7g0234691 31.064 235 130 7 79 303 92 304 5.59e-26 107
Msa0077950 MtrunA17_Chr4g0047231 36.220 127 75 2 174 294 147 273 9.69e-26 105
Msa0077950 MtrunA17_Chr4g0047221 37.190 121 70 2 180 294 206 326 1.43e-25 106
Msa0077950 MtrunA17_Chr8g0339051 28.205 234 146 5 77 303 47 265 1.16e-24 102
Msa0077950 MtrunA17_Chr5g0396281 35.252 139 79 2 176 308 97 230 2.11e-24 100
Msa0077950 MtrunA17_Chr2g0282311 30.719 153 99 3 173 319 140 291 4.47e-23 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0077950 AT3G22970.1 60.831 337 117 8 4 337 5 329 1.28e-118 349
Msa0077950 AT4G14620.1 51.804 388 125 14 4 383 2 335 4.52e-106 316
Msa0077950 AT2G38820.2 50.667 300 116 11 4 296 5 279 3.86e-87 266
Msa0077950 AT3G22970.2 62.437 197 73 1 141 337 23 218 4.30e-74 231
Msa0077950 AT3G54550.1 42.568 296 131 9 5 295 6 267 5.14e-63 204
Msa0077950 AT2G38820.1 44.550 211 85 11 4 207 5 190 5.78e-36 131
Msa0077950 AT2G39650.2 41.045 134 73 1 176 303 48 181 9.48e-32 120
Msa0077950 AT2G39650.1 41.045 134 73 1 176 303 110 243 1.91e-31 121
Msa0077950 AT3G07350.1 40.580 138 75 2 177 308 137 273 2.38e-31 121
Msa0077950 AT4G32480.1 39.355 155 82 4 176 324 116 264 1.44e-30 119
Msa0077950 AT1G77160.1 33.149 181 100 3 141 300 42 222 1.55e-30 118
Msa0077950 AT1G77145.1 39.189 148 72 2 173 302 72 219 9.19e-30 115
Msa0077950 AT1G77160.2 39.041 146 71 2 173 300 22 167 1.08e-29 114
Msa0077950 AT3G25240.1 40.940 149 78 3 155 294 93 240 7.01e-29 114
Msa0077950 AT2G20670.1 39.394 132 72 3 176 300 117 247 5.32e-27 109
Msa0077950 AT1G12030.1 34.177 158 97 4 139 295 79 230 8.50e-25 103
Msa0077950 AT1G62420.1 31.325 166 110 2 133 295 66 230 9.60e-25 102
Msa0077950 AT1G77145.2 44.231 104 48 1 209 302 59 162 1.67e-23 97.4

Find 104 sgRNAs with CRISPR-Local

Find 258 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTATTAGCGTTCTGGATT+AGG 0.250555 1_2:+55154362 None:intergenic
GGCGAGACGTGCATTGTTAA+TGG 0.255163 1_2:+55154226 None:intergenic
ACGGGATGTAATAATGAAAA+TGG 0.290817 1_2:-55152539 Msa0077950:three_prime_UTR
CGGTGAGAAAATATCTTTGC+AGG 0.298776 1_2:-55152884 Msa0077950:CDS
TATCTTCTCTATTAGCGTTC+TGG 0.320600 1_2:+55154356 None:intergenic
AATAGATGCAACTGCTTTAA+CGG 0.345730 1_2:-55153780 Msa0077950:CDS
GTGGTAATGACTACTGTTTA+TGG 0.349845 1_2:+55152560 None:intergenic
CTTCGATTTGCAAATCGAAA+TGG 0.365715 1_2:-55153420 Msa0077950:CDS
GACTTCCTCCACGGCGGGAC+AGG 0.368324 1_2:+55153051 None:intergenic
GTGGAGGAAGTCAGAGTATA+TGG 0.390934 1_2:-55153040 Msa0077950:CDS
GAAAATATCTTTGCAGGAAT+CGG 0.392848 1_2:-55152878 Msa0077950:CDS
TTTGAGATTGCTCGATCGAC+GGG 0.423911 1_2:-55153195 Msa0077950:CDS
CGCCGGAATGTTCATTTCAC+CGG 0.425304 1_2:+55154265 None:intergenic
TTTCCTTCTTCTATGGTTTG+AGG 0.431240 1_2:+55152740 None:intergenic
TGTATTTCCTTTGAAACAAA+GGG 0.434432 1_2:-55152599 Msa0077950:three_prime_UTR
GAACACGTGGCGGCGATGAT+TGG 0.434740 1_2:+55154205 None:intergenic
GTTGCCGACGTGGCAATTAC+CGG 0.447742 1_2:-55152815 Msa0077950:CDS
GCCGGCGAAGTTCCACTTCC+CGG 0.448391 1_2:-55153915 Msa0077950:CDS
GACGAAGAACTTGATTTCTT+CGG 0.451688 1_2:-55153738 Msa0077950:CDS
GCAGAAAATCTTCAATCTCT+AGG 0.452854 1_2:-55153451 Msa0077950:CDS
TTTGCTAAGGCAACGGAGCT+AGG 0.455852 1_2:+55153867 None:intergenic
GGTTCATCGGACTTGTCGCC+GGG 0.456543 1_2:+55153897 None:intergenic
ACAGAGTCCCTTTGTTTCAA+AGG 0.458771 1_2:+55152592 None:intergenic
CAATAGAACAAACACATTGC+CGG 0.458931 1_2:-55154303 Msa0077950:five_prime_UTR
GAGTCTGTCACGAAGGTTGT+CGG 0.460032 1_2:+55152967 None:intergenic
TTCGGCGAATCTATCGCTAC+TGG 0.460109 1_2:-55153720 Msa0077950:CDS
TCGGACTTGTCGCCGGGAAG+TGG 0.462109 1_2:+55153903 None:intergenic
AAAGGAGCGACAGTGGTGAC+TGG 0.464611 1_2:-55152769 Msa0077950:CDS
AGGTTTCTCTGAGAAGTTAG+TGG 0.470712 1_2:+55153944 None:intergenic
TGAATATATCGATGTGTTTG+TGG 0.473335 1_2:-55153259 Msa0077950:CDS
AAAGTAAAGAGTGTTGAGAA+AGG 0.492470 1_2:-55152787 Msa0077950:CDS
GTTTGAGATTGCTCGATCGA+CGG 0.495268 1_2:-55153196 Msa0077950:CDS
TCGATCGACGGGAACGTTCA+AGG 0.497302 1_2:-55153184 Msa0077950:CDS
AAAGCATAATCAAAATCAAA+AGG 0.501310 1_2:-55152683 Msa0077950:three_prime_UTR
CGCCGGTGAAATGAACATTC+CGG 0.504576 1_2:-55154267 Msa0077950:five_prime_UTR
TTGTATTTCCTTTGAAACAA+AGG 0.510341 1_2:-55152600 Msa0077950:three_prime_UTR
AAGCAGAGTTTGAAGAAGAA+AGG 0.517627 1_2:-55153078 Msa0077950:CDS
CTGAATCGATGTCGATCGGT+TGG 0.517827 1_2:+55154075 None:intergenic
GCAACGGAGCTAGGCTCAAA+CGG 0.518520 1_2:+55153876 None:intergenic
CGGTTCATCGGACTTGTCGC+CGG 0.521847 1_2:+55153896 None:intergenic
AGTAACCTTGAGTGCGTCAC+CGG 0.532317 1_2:+55153683 None:intergenic
TAGCCTCAAACCATAGAAGA+AGG 0.535681 1_2:-55152743 Msa0077950:exon
GATTTCCCGACGAAAATGTA+AGG 0.537019 1_2:+55153144 None:intergenic
GTCACGAAGGTTGTCGGTGA+CGG 0.537918 1_2:+55152973 None:intergenic
GCCGGGAAGTGGAACTTCGC+CGG 0.539650 1_2:+55153914 None:intergenic
CGACGGTGGTGTTGCCGACG+TGG 0.539789 1_2:-55152825 Msa0077950:CDS
CAGGAATCGGAAACTGTCTC+CGG 0.542143 1_2:-55152865 Msa0077950:CDS
AAAGACTCTTCGTGTTCGAC+CGG 0.544489 1_2:-55153992 Msa0077950:CDS
ACTGGTTCTTTCAACGATGC+CGG 0.549073 1_2:-55153702 Msa0077950:CDS
GGAACTTCGCCGGCGACGAT+AGG 0.549626 1_2:+55153924 None:intergenic
CGATGCCGGTGACGCACTCA+AGG 0.551605 1_2:-55153688 Msa0077950:intron
GCTAGGCTCAAACGGTTCAT+CGG 0.551711 1_2:+55153884 None:intergenic
CCGGCGAGTTTCACTATCGC+CGG 0.560249 1_2:+55154284 None:intergenic
TTGACGCGTTTGAAAACTGC+CGG 0.562462 1_2:+55153973 None:intergenic
TGTTGAGAAAGGAGCGACAG+TGG 0.564434 1_2:-55152776 Msa0077950:CDS
AATACCTTGTGCGAGTGTTG+CGG 0.566333 1_2:-55153560 Msa0077950:CDS
TTCAGACGAGATTTCAACAC+AGG 0.566428 1_2:+55154014 None:intergenic
ACACTCTTTACTTTCACTGC+CGG 0.566618 1_2:+55152796 None:intergenic
TCAGATCGTCACCGTCGTAT+CGG 0.567992 1_2:-55153109 Msa0077950:CDS
CGTCACCGTCGTATCGGAGG+CGG 0.569275 1_2:-55153103 Msa0077950:CDS
AGACGGATTCACTCTGCTGC+AGG 0.574879 1_2:+55152996 None:intergenic
ATCACTCTCCGACGCAACGC+CGG 0.579926 1_2:+55152930 None:intergenic
GACTCGAAGGAGGATCTGAC+CGG 0.581417 1_2:-55152949 Msa0077950:CDS
TTCTCTGAATCGATGTCGAT+CGG 0.583729 1_2:+55154071 None:intergenic
GGTGAGTGGGAACTGATCTT+CGG 0.586732 1_2:-55152904 Msa0077950:CDS
CGGAGAGTGATTGTGGTGAG+TGG 0.590871 1_2:-55152918 Msa0077950:CDS
GAATGCCTGTCCCGCCGTGG+AGG 0.591996 1_2:-55153056 Msa0077950:CDS
AAAACAAAATCTCATCCAGC+TGG 0.593313 1_2:-55153394 Msa0077950:intron
GGATCTGACCGGCGTTGCGT+CGG 0.593452 1_2:-55152938 Msa0077950:CDS
AACCTTCGTGACAGACTCGA+AGG 0.593595 1_2:-55152962 Msa0077950:CDS
AAGGTTGTCGGTGACGGAGA+CGG 0.594096 1_2:+55152979 None:intergenic
TGCACTACAGTATTATCTCG+TGG 0.598652 1_2:+55154183 None:intergenic
ACTCTGACTTCCTCCACGGC+GGG 0.602994 1_2:+55153046 None:intergenic
ATGTGTTTGTGGAAGGTGAG+AGG 0.604456 1_2:-55153248 Msa0077950:CDS
CGGATTCACTCTGCTGCAGG+AGG 0.617962 1_2:+55152999 None:intergenic
GTATTATCTCGTGGAACACG+TGG 0.621242 1_2:+55154192 None:intergenic
CAGAGTATATGGTAGCTAAG+TGG 0.623568 1_2:-55153029 Msa0077950:CDS
CTCCTTCGAGTCTGTCACGA+AGG 0.623645 1_2:+55152960 None:intergenic
GTTGCGTCGGAGAGTGATTG+TGG 0.627922 1_2:-55152925 Msa0077950:CDS
AAGGAATGCCTGTCCCGCCG+TGG 0.630360 1_2:-55153059 Msa0077950:CDS
CTCTCCGCAACACTCGCACA+AGG 0.630481 1_2:+55153556 None:intergenic
GGAGAGTGATTGTGGTGAGT+GGG 0.630723 1_2:-55152917 Msa0077950:CDS
GAAGAAATCAAGTTCTTCGT+CGG 0.632676 1_2:+55153740 None:intergenic
TCAGAGAAACCTATCGTCGC+CGG 0.637917 1_2:-55153933 Msa0077950:CDS
GATCGTCACCGTCGTATCGG+AGG 0.639360 1_2:-55153106 Msa0077950:CDS
CTTCGCCGCCTCCGATACGA+CGG 0.640176 1_2:+55153098 None:intergenic
ATATACTCTGACTTCCTCCA+CGG 0.643784 1_2:+55153042 None:intergenic
ATACGACGGTGACGATCTGA+CGG 0.644479 1_2:+55153112 None:intergenic
CCGGCGATAGTGAAACTCGC+CGG 0.645620 1_2:-55154284 Msa0077950:five_prime_UTR
CGATTCAGAGAAGTTAGCCG+TGG 0.646198 1_2:-55154060 Msa0077950:CDS
TATATCGATGTGTTTGTGGA+AGG 0.646530 1_2:-55153255 Msa0077950:CDS
TAAACAGTAGTCATTACCAC+GGG 0.649655 1_2:-55152557 Msa0077950:three_prime_UTR
TCGATCGGTTGGATCTTCAT+CGG 0.650602 1_2:+55154086 None:intergenic
CACGTCGGCAACACCACCGT+CGG 0.653432 1_2:+55152826 None:intergenic
GAATCGGAAACTGTCTCCGG+TGG 0.655145 1_2:-55152862 Msa0077950:CDS
TACTCTGACTTCCTCCACGG+CGG 0.656636 1_2:+55153045 None:intergenic
TGGTGAGAAAATCTCACCGA+CGG 0.675741 1_2:-55152842 Msa0077950:CDS
ACTGCCGGTAATTGCCACGT+CGG 0.691523 1_2:+55152811 None:intergenic
ATAAACAGTAGTCATTACCA+CGG 0.694310 1_2:-55152558 Msa0077950:three_prime_UTR
AAAACAAAGAGAAATCCGAA+AGG 0.696222 1_2:+55152629 None:intergenic
TTATCTCGTGGAACACGTGG+CGG 0.703524 1_2:+55154195 None:intergenic
CTTCGTGACAGACTCGAAGG+AGG 0.707524 1_2:-55152959 Msa0077950:CDS
TGAGAAAATCTCACCGACGG+TGG 0.711396 1_2:-55152839 Msa0077950:CDS
GACGTCGTTTCGAACAACCA+CGG 0.725989 1_2:+55154043 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTTATTTAAATTTT+TGG - chr1_2:55153440-55153459 Msa0077950:CDS 0.0%
!!! AAATTTTTTATTTAAATTTT+TGG - chr1_2:55153440-55153459 Msa0077950:CDS 0.0%
!! AAAAAATTTCAAAAAAATTG+GGG + chr1_2:55153429-55153448 None:intergenic 10.0%
!! AAAAAATTTCAAAAAAATTG+GGG + chr1_2:55153429-55153448 None:intergenic 10.0%
!!! AACATTCAATTTTTCAAATT+AGG + chr1_2:55153480-55153499 None:intergenic 15.0%
!!! TTAGTTTAATTTTTACCTTT+CGG - chr1_2:55154144-55154163 Msa0077950:five_prime_UTR 15.0%
!!! AACATTCAATTTTTCAAATT+AGG + chr1_2:55153480-55153499 None:intergenic 15.0%
!!! TTAGTTTAATTTTTACCTTT+CGG - chr1_2:55154144-55154163 Msa0077950:five_prime_UTR 15.0%
!! TATTAAACTCTGCATAAAAA+AGG + chr1_2:55153212-55153231 None:intergenic 20.0%
!!! AAAAACAGTAAAGTTTTCAA+AGG - chr1_2:55153289-55153308 Msa0077950:intron 20.0%
!! ATTTGAAAAATTGAATGTTG+TGG - chr1_2:55153481-55153500 Msa0077950:CDS 20.0%
!! AAAGCATAATCAAAATCAAA+AGG - chr1_2:55154105-55154124 Msa0077950:exon 20.0%
!! TATTAAACTCTGCATAAAAA+AGG + chr1_2:55153212-55153231 None:intergenic 20.0%
!!! AAAAACAGTAAAGTTTTCAA+AGG - chr1_2:55153289-55153308 Msa0077950:intron 20.0%
!! ATTTGAAAAATTGAATGTTG+TGG - chr1_2:55153481-55153500 Msa0077950:CDS 20.0%
!! AAAGCATAATCAAAATCAAA+AGG - chr1_2:55154105-55154124 Msa0077950:exon 20.0%
!!! ACTGTTTTTGTCAACTATTT+TGG + chr1_2:55153278-55153297 None:intergenic 25.0%
!!! CATTGATATTGATTTTCGTT+CGG - chr1_2:55153568-55153587 Msa0077950:CDS 25.0%
!!! TTGTATTTCCTTTGAAACAA+AGG - chr1_2:55154188-55154207 Msa0077950:five_prime_UTR 25.0%
!!! TGTATTTCCTTTGAAACAAA+GGG - chr1_2:55154189-55154208 Msa0077950:five_prime_UTR 25.0%
!!! ACTGTTTTTGTCAACTATTT+TGG + chr1_2:55153278-55153297 None:intergenic 25.0%
!!! CATTGATATTGATTTTCGTT+CGG - chr1_2:55153568-55153587 Msa0077950:CDS 25.0%
!!! TTGTATTTCCTTTGAAACAA+AGG - chr1_2:55154188-55154207 Msa0077950:five_prime_UTR 25.0%
!!! TGTATTTCCTTTGAAACAAA+GGG - chr1_2:55154189-55154208 Msa0077950:five_prime_UTR 25.0%
AATAGATGCAACTGCTTTAA+CGG - chr1_2:55153008-55153027 Msa0077950:CDS 30.0%
!!! GTGGATTTTGATTTTGATTC+AGG - chr1_2:55153500-55153519 Msa0077950:CDS 30.0%
TGAATATATCGATGTGTTTG+TGG - chr1_2:55153529-55153548 Msa0077950:CDS 30.0%
! TTTCTTCCTTACATTTTCGT+CGG - chr1_2:55153638-55153657 Msa0077950:intron 30.0%
GAAAATATCTTTGCAGGAAT+CGG - chr1_2:55153910-55153929 Msa0077950:CDS 30.0%
!! AAAGTAAAGAGTGTTGAGAA+AGG - chr1_2:55154001-55154020 Msa0077950:CDS 30.0%
! GCAAAATTTTCCTTCTTCTA+TGG + chr1_2:55154058-55154077 None:intergenic 30.0%
AAAACAAAGAGAAATCCGAA+AGG + chr1_2:55154162-55154181 None:intergenic 30.0%
!!! TTCGGATTTCTCTTTGTTTT+CGG - chr1_2:55154162-55154181 Msa0077950:five_prime_UTR 30.0%
ATAAACAGTAGTCATTACCA+CGG - chr1_2:55154230-55154249 Msa0077950:five_prime_UTR 30.0%
! ATTTTCATTATTACATCCCG+TGG + chr1_2:55154250-55154269 None:intergenic 30.0%
ACGGGATGTAATAATGAAAA+TGG - chr1_2:55154249-55154268 Msa0077950:five_prime_UTR 30.0%
AATAGATGCAACTGCTTTAA+CGG - chr1_2:55153008-55153027 Msa0077950:CDS 30.0%
!!! GTGGATTTTGATTTTGATTC+AGG - chr1_2:55153500-55153519 Msa0077950:CDS 30.0%
TGAATATATCGATGTGTTTG+TGG - chr1_2:55153529-55153548 Msa0077950:CDS 30.0%
! TTTCTTCCTTACATTTTCGT+CGG - chr1_2:55153638-55153657 Msa0077950:intron 30.0%
GAAAATATCTTTGCAGGAAT+CGG - chr1_2:55153910-55153929 Msa0077950:CDS 30.0%
!! AAAGTAAAGAGTGTTGAGAA+AGG - chr1_2:55154001-55154020 Msa0077950:CDS 30.0%
! GCAAAATTTTCCTTCTTCTA+TGG + chr1_2:55154058-55154077 None:intergenic 30.0%
AAAACAAAGAGAAATCCGAA+AGG + chr1_2:55154162-55154181 None:intergenic 30.0%
!!! TTCGGATTTCTCTTTGTTTT+CGG - chr1_2:55154162-55154181 Msa0077950:five_prime_UTR 30.0%
ATAAACAGTAGTCATTACCA+CGG - chr1_2:55154230-55154249 Msa0077950:five_prime_UTR 30.0%
! ATTTTCATTATTACATCCCG+TGG + chr1_2:55154250-55154269 None:intergenic 30.0%
ACGGGATGTAATAATGAAAA+TGG - chr1_2:55154249-55154268 Msa0077950:five_prime_UTR 30.0%
TATCTTCTCTATTAGCGTTC+TGG + chr1_2:55152435-55152454 None:intergenic 35.0%
CAATAGAACAAACACATTGC+CGG - chr1_2:55152485-55152504 Msa0077950:three_prime_UTR 35.0%
GAAGAAATCAAGTTCTTCGT+CGG + chr1_2:55153051-55153070 None:intergenic 35.0%
GACGAAGAACTTGATTTCTT+CGG - chr1_2:55153050-55153069 Msa0077950:CDS 35.0%
GCAGAAAATCTTCAATCTCT+AGG - chr1_2:55153337-55153356 Msa0077950:intron 35.0%
! CTTCGATTTGCAAATCGAAA+TGG - chr1_2:55153368-55153387 Msa0077950:intron 35.0%
AAAACAAAATCTCATCCAGC+TGG - chr1_2:55153394-55153413 Msa0077950:intron 35.0%
TATATCGATGTGTTTGTGGA+AGG - chr1_2:55153533-55153552 Msa0077950:CDS 35.0%
! TTCTTCCTTACATTTTCGTC+GGG - chr1_2:55153639-55153658 Msa0077950:intron 35.0%
! TTACATTTTCGTCGGGAAAT+CGG - chr1_2:55153646-55153665 Msa0077950:intron 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG - chr1_2:55153710-55153729 Msa0077950:CDS 35.0%
TTTCCTTCTTCTATGGTTTG+AGG + chr1_2:55154051-55154070 None:intergenic 35.0%
! GTGGTAATGACTACTGTTTA+TGG + chr1_2:55154231-55154250 None:intergenic 35.0%
TAAACAGTAGTCATTACCAC+GGG - chr1_2:55154231-55154250 Msa0077950:five_prime_UTR 35.0%
TATCTTCTCTATTAGCGTTC+TGG + chr1_2:55152435-55152454 None:intergenic 35.0%
CAATAGAACAAACACATTGC+CGG - chr1_2:55152485-55152504 Msa0077950:three_prime_UTR 35.0%
GAAGAAATCAAGTTCTTCGT+CGG + chr1_2:55153051-55153070 None:intergenic 35.0%
GACGAAGAACTTGATTTCTT+CGG - chr1_2:55153050-55153069 Msa0077950:CDS 35.0%
GCAGAAAATCTTCAATCTCT+AGG - chr1_2:55153337-55153356 Msa0077950:intron 35.0%
! CTTCGATTTGCAAATCGAAA+TGG - chr1_2:55153368-55153387 Msa0077950:intron 35.0%
AAAACAAAATCTCATCCAGC+TGG - chr1_2:55153394-55153413 Msa0077950:intron 35.0%
TATATCGATGTGTTTGTGGA+AGG - chr1_2:55153533-55153552 Msa0077950:CDS 35.0%
! TTCTTCCTTACATTTTCGTC+GGG - chr1_2:55153639-55153658 Msa0077950:intron 35.0%
! TTACATTTTCGTCGGGAAAT+CGG - chr1_2:55153646-55153665 Msa0077950:intron 35.0%
AAGCAGAGTTTGAAGAAGAA+AGG - chr1_2:55153710-55153729 Msa0077950:CDS 35.0%
TTTCCTTCTTCTATGGTTTG+AGG + chr1_2:55154051-55154070 None:intergenic 35.0%
! GTGGTAATGACTACTGTTTA+TGG + chr1_2:55154231-55154250 None:intergenic 35.0%
TAAACAGTAGTCATTACCAC+GGG - chr1_2:55154231-55154250 Msa0077950:five_prime_UTR 35.0%
GAAAAAGAAGAAACGTTCGC+CGG + chr1_2:55152543-55152562 None:intergenic 40.0%
TGCACTACAGTATTATCTCG+TGG + chr1_2:55152608-55152627 None:intergenic 40.0%
TTCTCTGAATCGATGTCGAT+CGG + chr1_2:55152720-55152739 None:intergenic 40.0%
TTCAGACGAGATTTCAACAC+AGG + chr1_2:55152777-55152796 None:intergenic 40.0%
! AGGTTTCTCTGAGAAGTTAG+TGG + chr1_2:55152847-55152866 None:intergenic 40.0%
!! CACCATTTTTGCTAAGGCAA+CGG + chr1_2:55152931-55152950 None:intergenic 40.0%
!! ACTCTGCACCATTTTTGCTA+AGG + chr1_2:55152937-55152956 None:intergenic 40.0%
GATTTCCCGACGAAAATGTA+AGG + chr1_2:55153647-55153666 None:intergenic 40.0%
ATATACTCTGACTTCCTCCA+CGG + chr1_2:55153749-55153768 None:intergenic 40.0%
CAGAGTATATGGTAGCTAAG+TGG - chr1_2:55153759-55153778 Msa0077950:CDS 40.0%
CGGTGAGAAAATATCTTTGC+AGG - chr1_2:55153904-55153923 Msa0077950:CDS 40.0%
ACACTCTTTACTTTCACTGC+CGG + chr1_2:55153995-55154014 None:intergenic 40.0%
TAGCCTCAAACCATAGAAGA+AGG - chr1_2:55154045-55154064 Msa0077950:CDS 40.0%
! ACAGAGTCCCTTTGTTTCAA+AGG + chr1_2:55154199-55154218 None:intergenic 40.0%
! CAAGCACGCATTTTTAACAG+TGG + chr1_2:55154298-55154317 None:intergenic 40.0%
GAAAAAGAAGAAACGTTCGC+CGG + chr1_2:55152543-55152562 None:intergenic 40.0%
TGCACTACAGTATTATCTCG+TGG + chr1_2:55152608-55152627 None:intergenic 40.0%
TTCTCTGAATCGATGTCGAT+CGG + chr1_2:55152720-55152739 None:intergenic 40.0%
TTCAGACGAGATTTCAACAC+AGG + chr1_2:55152777-55152796 None:intergenic 40.0%
! AGGTTTCTCTGAGAAGTTAG+TGG + chr1_2:55152847-55152866 None:intergenic 40.0%
!! CACCATTTTTGCTAAGGCAA+CGG + chr1_2:55152931-55152950 None:intergenic 40.0%
!! ACTCTGCACCATTTTTGCTA+AGG + chr1_2:55152937-55152956 None:intergenic 40.0%
GATTTCCCGACGAAAATGTA+AGG + chr1_2:55153647-55153666 None:intergenic 40.0%
ATATACTCTGACTTCCTCCA+CGG + chr1_2:55153749-55153768 None:intergenic 40.0%
CAGAGTATATGGTAGCTAAG+TGG - chr1_2:55153759-55153778 Msa0077950:CDS 40.0%
CGGTGAGAAAATATCTTTGC+AGG - chr1_2:55153904-55153923 Msa0077950:CDS 40.0%
ACACTCTTTACTTTCACTGC+CGG + chr1_2:55153995-55154014 None:intergenic 40.0%
TAGCCTCAAACCATAGAAGA+AGG - chr1_2:55154045-55154064 Msa0077950:CDS 40.0%
! ACAGAGTCCCTTTGTTTCAA+AGG + chr1_2:55154199-55154218 None:intergenic 40.0%
! CAAGCACGCATTTTTAACAG+TGG + chr1_2:55154298-55154317 None:intergenic 40.0%
GTATTATCTCGTGGAACACG+TGG + chr1_2:55152599-55152618 None:intergenic 45.0%
TCGATCGGTTGGATCTTCAT+CGG + chr1_2:55152705-55152724 None:intergenic 45.0%
AAAGACTCTTCGTGTTCGAC+CGG - chr1_2:55152796-55152815 Msa0077950:CDS 45.0%
TTGACGCGTTTGAAAACTGC+CGG + chr1_2:55152818-55152837 None:intergenic 45.0%
CTCCGTTGCCTTAGCAAAAA+TGG - chr1_2:55152926-55152945 Msa0077950:CDS 45.0%
!!! TTGCGAGTGAGTTTTGAGAC+TGG + chr1_2:55152990-55153009 None:intergenic 45.0%
! ACTGGTTCTTTCAACGATGC+CGG - chr1_2:55153086-55153105 Msa0077950:CDS 45.0%
! AATACCTTGTGCGAGTGTTG+CGG - chr1_2:55153228-55153247 Msa0077950:CDS 45.0%
TTGGGGAAAAATGTACCAGC+TGG + chr1_2:55153412-55153431 None:intergenic 45.0%
ATGTGTTTGTGGAAGGTGAG+AGG - chr1_2:55153540-55153559 Msa0077950:CDS 45.0%
! GTTTGAGATTGCTCGATCGA+CGG - chr1_2:55153592-55153611 Msa0077950:intron 45.0%
! TTTGAGATTGCTCGATCGAC+GGG - chr1_2:55153593-55153612 Msa0077950:intron 45.0%
GTGGAGGAAGTCAGAGTATA+TGG - chr1_2:55153748-55153767 Msa0077950:CDS 45.0%
TGGTGAGAAAATCTCACCGA+CGG - chr1_2:55153946-55153965 Msa0077950:CDS 45.0%
GTATTATCTCGTGGAACACG+TGG + chr1_2:55152599-55152618 None:intergenic 45.0%
TCGATCGGTTGGATCTTCAT+CGG + chr1_2:55152705-55152724 None:intergenic 45.0%
AAAGACTCTTCGTGTTCGAC+CGG - chr1_2:55152796-55152815 Msa0077950:CDS 45.0%
TTGACGCGTTTGAAAACTGC+CGG + chr1_2:55152818-55152837 None:intergenic 45.0%
CTCCGTTGCCTTAGCAAAAA+TGG - chr1_2:55152926-55152945 Msa0077950:CDS 45.0%
!!! TTGCGAGTGAGTTTTGAGAC+TGG + chr1_2:55152990-55153009 None:intergenic 45.0%
! ACTGGTTCTTTCAACGATGC+CGG - chr1_2:55153086-55153105 Msa0077950:CDS 45.0%
! AATACCTTGTGCGAGTGTTG+CGG - chr1_2:55153228-55153247 Msa0077950:CDS 45.0%
TTGGGGAAAAATGTACCAGC+TGG + chr1_2:55153412-55153431 None:intergenic 45.0%
ATGTGTTTGTGGAAGGTGAG+AGG - chr1_2:55153540-55153559 Msa0077950:CDS 45.0%
! GTTTGAGATTGCTCGATCGA+CGG - chr1_2:55153592-55153611 Msa0077950:intron 45.0%
! TTTGAGATTGCTCGATCGAC+GGG - chr1_2:55153593-55153612 Msa0077950:intron 45.0%
GTGGAGGAAGTCAGAGTATA+TGG - chr1_2:55153748-55153767 Msa0077950:CDS 45.0%
TGGTGAGAAAATCTCACCGA+CGG - chr1_2:55153946-55153965 Msa0077950:CDS 45.0%
!! TAAAAAATTTCAAAAAAATT+GGG + chr1_2:55153430-55153449 None:intergenic 5.0%
!! ATAAAAAATTTCAAAAAAAT+TGG + chr1_2:55153431-55153450 None:intergenic 5.0%
!! TAAAAAATTTCAAAAAAATT+GGG + chr1_2:55153430-55153449 None:intergenic 5.0%
!! ATAAAAAATTTCAAAAAAAT+TGG + chr1_2:55153431-55153450 None:intergenic 5.0%
CGCCGGTGAAATGAACATTC+CGG - chr1_2:55152521-55152540 Msa0077950:three_prime_UTR 50.0%
CGCCGGAATGTTCATTTCAC+CGG + chr1_2:55152526-55152545 None:intergenic 50.0%
GGCGAGACGTGCATTGTTAA+TGG + chr1_2:55152565-55152584 None:intergenic 50.0%
TTATCTCGTGGAACACGTGG+CGG + chr1_2:55152596-55152615 None:intergenic 50.0%
CTGAATCGATGTCGATCGGT+TGG + chr1_2:55152716-55152735 None:intergenic 50.0%
CGATTCAGAGAAGTTAGCCG+TGG - chr1_2:55152728-55152747 Msa0077950:three_prime_UTR 50.0%
GACGTCGTTTCGAACAACCA+CGG + chr1_2:55152748-55152767 None:intergenic 50.0%
TCAGAGAAACCTATCGTCGC+CGG - chr1_2:55152855-55152874 Msa0077950:CDS 50.0%
GCTAGGCTCAAACGGTTCAT+CGG + chr1_2:55152907-55152926 None:intergenic 50.0%
TTTGCTAAGGCAACGGAGCT+AGG + chr1_2:55152924-55152943 None:intergenic 50.0%
TTCGGCGAATCTATCGCTAC+TGG - chr1_2:55153068-55153087 Msa0077950:CDS 50.0%
AGTAACCTTGAGTGCGTCAC+CGG + chr1_2:55153108-55153127 None:intergenic 50.0%
ATACGACGGTGACGATCTGA+CGG + chr1_2:55153679-55153698 None:intergenic 50.0%
TCAGATCGTCACCGTCGTAT+CGG - chr1_2:55153679-55153698 Msa0077950:intron 50.0%
GAGTCTGTCACGAAGGTTGT+CGG + chr1_2:55153824-55153843 None:intergenic 50.0%
AACCTTCGTGACAGACTCGA+AGG - chr1_2:55153826-55153845 Msa0077950:CDS 50.0%
GGAGAGTGATTGTGGTGAGT+GGG - chr1_2:55153871-55153890 Msa0077950:CDS 50.0%
GGTGAGTGGGAACTGATCTT+CGG - chr1_2:55153884-55153903 Msa0077950:CDS 50.0%
CAGGAATCGGAAACTGTCTC+CGG - chr1_2:55153923-55153942 Msa0077950:CDS 50.0%
! CGGTGAGATTTTCTCACCAC+CGG + chr1_2:55153945-55153964 None:intergenic 50.0%
TGAGAAAATCTCACCGACGG+TGG - chr1_2:55153949-55153968 Msa0077950:CDS 50.0%
TGTTGAGAAAGGAGCGACAG+TGG - chr1_2:55154012-55154031 Msa0077950:CDS 50.0%
CGCCGGTGAAATGAACATTC+CGG - chr1_2:55152521-55152540 Msa0077950:three_prime_UTR 50.0%
CGCCGGAATGTTCATTTCAC+CGG + chr1_2:55152526-55152545 None:intergenic 50.0%
GGCGAGACGTGCATTGTTAA+TGG + chr1_2:55152565-55152584 None:intergenic 50.0%
TTATCTCGTGGAACACGTGG+CGG + chr1_2:55152596-55152615 None:intergenic 50.0%
CTGAATCGATGTCGATCGGT+TGG + chr1_2:55152716-55152735 None:intergenic 50.0%
CGATTCAGAGAAGTTAGCCG+TGG - chr1_2:55152728-55152747 Msa0077950:three_prime_UTR 50.0%
GACGTCGTTTCGAACAACCA+CGG + chr1_2:55152748-55152767 None:intergenic 50.0%
TCAGAGAAACCTATCGTCGC+CGG - chr1_2:55152855-55152874 Msa0077950:CDS 50.0%
GCTAGGCTCAAACGGTTCAT+CGG + chr1_2:55152907-55152926 None:intergenic 50.0%
TTTGCTAAGGCAACGGAGCT+AGG + chr1_2:55152924-55152943 None:intergenic 50.0%
TTCGGCGAATCTATCGCTAC+TGG - chr1_2:55153068-55153087 Msa0077950:CDS 50.0%
AGTAACCTTGAGTGCGTCAC+CGG + chr1_2:55153108-55153127 None:intergenic 50.0%
ATACGACGGTGACGATCTGA+CGG + chr1_2:55153679-55153698 None:intergenic 50.0%
TCAGATCGTCACCGTCGTAT+CGG - chr1_2:55153679-55153698 Msa0077950:intron 50.0%
GAGTCTGTCACGAAGGTTGT+CGG + chr1_2:55153824-55153843 None:intergenic 50.0%
AACCTTCGTGACAGACTCGA+AGG - chr1_2:55153826-55153845 Msa0077950:CDS 50.0%
GGAGAGTGATTGTGGTGAGT+GGG - chr1_2:55153871-55153890 Msa0077950:CDS 50.0%
GGTGAGTGGGAACTGATCTT+CGG - chr1_2:55153884-55153903 Msa0077950:CDS 50.0%
CAGGAATCGGAAACTGTCTC+CGG - chr1_2:55153923-55153942 Msa0077950:CDS 50.0%
! CGGTGAGATTTTCTCACCAC+CGG + chr1_2:55153945-55153964 None:intergenic 50.0%
TGAGAAAATCTCACCGACGG+TGG - chr1_2:55153949-55153968 Msa0077950:CDS 50.0%
TGTTGAGAAAGGAGCGACAG+TGG - chr1_2:55154012-55154031 Msa0077950:CDS 50.0%
GCAACGGAGCTAGGCTCAAA+CGG + chr1_2:55152915-55152934 None:intergenic 55.0%
TCGATCGACGGGAACGTTCA+AGG - chr1_2:55153604-55153623 Msa0077950:intron 55.0%
TACTCTGACTTCCTCCACGG+CGG + chr1_2:55153746-55153765 None:intergenic 55.0%
! AGACGGATTCACTCTGCTGC+AGG + chr1_2:55153795-55153814 None:intergenic 55.0%
!! AAGGTTGTCGGTGACGGAGA+CGG + chr1_2:55153812-55153831 None:intergenic 55.0%
GTCACGAAGGTTGTCGGTGA+CGG + chr1_2:55153818-55153837 None:intergenic 55.0%
CTCCTTCGAGTCTGTCACGA+AGG + chr1_2:55153831-55153850 None:intergenic 55.0%
CTTCGTGACAGACTCGAAGG+AGG - chr1_2:55153829-55153848 Msa0077950:CDS 55.0%
GACTCGAAGGAGGATCTGAC+CGG - chr1_2:55153839-55153858 Msa0077950:CDS 55.0%
GTTGCGTCGGAGAGTGATTG+TGG - chr1_2:55153863-55153882 Msa0077950:CDS 55.0%
CGGAGAGTGATTGTGGTGAG+TGG - chr1_2:55153870-55153889 Msa0077950:CDS 55.0%
GAATCGGAAACTGTCTCCGG+TGG - chr1_2:55153926-55153945 Msa0077950:CDS 55.0%
GTTGCCGACGTGGCAATTAC+CGG - chr1_2:55153973-55153992 Msa0077950:CDS 55.0%
ACTGCCGGTAATTGCCACGT+CGG + chr1_2:55153980-55153999 None:intergenic 55.0%
AAAGGAGCGACAGTGGTGAC+TGG - chr1_2:55154019-55154038 Msa0077950:CDS 55.0%
GCAACGGAGCTAGGCTCAAA+CGG + chr1_2:55152915-55152934 None:intergenic 55.0%
TCGATCGACGGGAACGTTCA+AGG - chr1_2:55153604-55153623 Msa0077950:intron 55.0%
TACTCTGACTTCCTCCACGG+CGG + chr1_2:55153746-55153765 None:intergenic 55.0%
! AGACGGATTCACTCTGCTGC+AGG + chr1_2:55153795-55153814 None:intergenic 55.0%
!! AAGGTTGTCGGTGACGGAGA+CGG + chr1_2:55153812-55153831 None:intergenic 55.0%
GTCACGAAGGTTGTCGGTGA+CGG + chr1_2:55153818-55153837 None:intergenic 55.0%
CTCCTTCGAGTCTGTCACGA+AGG + chr1_2:55153831-55153850 None:intergenic 55.0%
CTTCGTGACAGACTCGAAGG+AGG - chr1_2:55153829-55153848 Msa0077950:CDS 55.0%
GACTCGAAGGAGGATCTGAC+CGG - chr1_2:55153839-55153858 Msa0077950:CDS 55.0%
GTTGCGTCGGAGAGTGATTG+TGG - chr1_2:55153863-55153882 Msa0077950:CDS 55.0%
CGGAGAGTGATTGTGGTGAG+TGG - chr1_2:55153870-55153889 Msa0077950:CDS 55.0%
GAATCGGAAACTGTCTCCGG+TGG - chr1_2:55153926-55153945 Msa0077950:CDS 55.0%
GTTGCCGACGTGGCAATTAC+CGG - chr1_2:55153973-55153992 Msa0077950:CDS 55.0%
ACTGCCGGTAATTGCCACGT+CGG + chr1_2:55153980-55153999 None:intergenic 55.0%
AAAGGAGCGACAGTGGTGAC+TGG - chr1_2:55154019-55154038 Msa0077950:CDS 55.0%
CCGGCGAGTTTCACTATCGC+CGG + chr1_2:55152507-55152526 None:intergenic 60.0%
CCGGCGATAGTGAAACTCGC+CGG - chr1_2:55152504-55152523 Msa0077950:three_prime_UTR 60.0%
GAACACGTGGCGGCGATGAT+TGG + chr1_2:55152586-55152605 None:intergenic 60.0%
GGTTCATCGGACTTGTCGCC+GGG + chr1_2:55152894-55152913 None:intergenic 60.0%
CGGTTCATCGGACTTGTCGC+CGG + chr1_2:55152895-55152914 None:intergenic 60.0%
CTCTCCGCAACACTCGCACA+AGG + chr1_2:55153235-55153254 None:intergenic 60.0%
GATCGTCACCGTCGTATCGG+AGG - chr1_2:55153682-55153701 Msa0077950:intron 60.0%
ACTCTGACTTCCTCCACGGC+GGG + chr1_2:55153745-55153764 None:intergenic 60.0%
CGGATTCACTCTGCTGCAGG+AGG + chr1_2:55153792-55153811 None:intergenic 60.0%
ATCACTCTCCGACGCAACGC+CGG + chr1_2:55153861-55153880 None:intergenic 60.0%
CCGGCGAGTTTCACTATCGC+CGG + chr1_2:55152507-55152526 None:intergenic 60.0%
CCGGCGATAGTGAAACTCGC+CGG - chr1_2:55152504-55152523 Msa0077950:three_prime_UTR 60.0%
GAACACGTGGCGGCGATGAT+TGG + chr1_2:55152586-55152605 None:intergenic 60.0%
GGTTCATCGGACTTGTCGCC+GGG + chr1_2:55152894-55152913 None:intergenic 60.0%
CGGTTCATCGGACTTGTCGC+CGG + chr1_2:55152895-55152914 None:intergenic 60.0%
CTCTCCGCAACACTCGCACA+AGG + chr1_2:55153235-55153254 None:intergenic 60.0%
GATCGTCACCGTCGTATCGG+AGG - chr1_2:55153682-55153701 Msa0077950:intron 60.0%
ACTCTGACTTCCTCCACGGC+GGG + chr1_2:55153745-55153764 None:intergenic 60.0%
CGGATTCACTCTGCTGCAGG+AGG + chr1_2:55153792-55153811 None:intergenic 60.0%
ATCACTCTCCGACGCAACGC+CGG + chr1_2:55153861-55153880 None:intergenic 60.0%
GGAACTTCGCCGGCGACGAT+AGG + chr1_2:55152867-55152886 None:intergenic 65.0%
GCCGGCGAAGTTCCACTTCC+CGG - chr1_2:55152873-55152892 Msa0077950:CDS 65.0%
GCCGGGAAGTGGAACTTCGC+CGG + chr1_2:55152877-55152896 None:intergenic 65.0%
TCGGACTTGTCGCCGGGAAG+TGG + chr1_2:55152888-55152907 None:intergenic 65.0%
CGATGCCGGTGACGCACTCA+AGG - chr1_2:55153100-55153119 Msa0077950:CDS 65.0%
CGTCACCGTCGTATCGGAGG+CGG - chr1_2:55153685-55153704 Msa0077950:intron 65.0%
CTTCGCCGCCTCCGATACGA+CGG + chr1_2:55153693-55153712 None:intergenic 65.0%
AAGGAATGCCTGTCCCGCCG+TGG - chr1_2:55153729-55153748 Msa0077950:CDS 65.0%
GGATCTGACCGGCGTTGCGT+CGG - chr1_2:55153850-55153869 Msa0077950:CDS 65.0%
CACGTCGGCAACACCACCGT+CGG + chr1_2:55153965-55153984 None:intergenic 65.0%
GGAACTTCGCCGGCGACGAT+AGG + chr1_2:55152867-55152886 None:intergenic 65.0%
GCCGGCGAAGTTCCACTTCC+CGG - chr1_2:55152873-55152892 Msa0077950:CDS 65.0%
GCCGGGAAGTGGAACTTCGC+CGG + chr1_2:55152877-55152896 None:intergenic 65.0%
TCGGACTTGTCGCCGGGAAG+TGG + chr1_2:55152888-55152907 None:intergenic 65.0%
CGATGCCGGTGACGCACTCA+AGG - chr1_2:55153100-55153119 Msa0077950:CDS 65.0%
CGTCACCGTCGTATCGGAGG+CGG - chr1_2:55153685-55153704 Msa0077950:intron 65.0%
CTTCGCCGCCTCCGATACGA+CGG + chr1_2:55153693-55153712 None:intergenic 65.0%
AAGGAATGCCTGTCCCGCCG+TGG - chr1_2:55153729-55153748 Msa0077950:CDS 65.0%
GGATCTGACCGGCGTTGCGT+CGG - chr1_2:55153850-55153869 Msa0077950:CDS 65.0%
CACGTCGGCAACACCACCGT+CGG + chr1_2:55153965-55153984 None:intergenic 65.0%
GAATGCCTGTCCCGCCGTGG+AGG - chr1_2:55153732-55153751 Msa0077950:CDS 70.0%
GACTTCCTCCACGGCGGGAC+AGG + chr1_2:55153740-55153759 None:intergenic 70.0%
!! CGACGGTGGTGTTGCCGACG+TGG - chr1_2:55153963-55153982 Msa0077950:CDS 70.0%
GAATGCCTGTCCCGCCGTGG+AGG - chr1_2:55153732-55153751 Msa0077950:CDS 70.0%
GACTTCCTCCACGGCGGGAC+AGG + chr1_2:55153740-55153759 None:intergenic 70.0%
!! CGACGGTGGTGTTGCCGACG+TGG - chr1_2:55153963-55153982 Msa0077950:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 55152429 55154381 55152429 ID=Msa0077950;Name=Msa0077950
chr1_2 mRNA 55152429 55154381 55152429 ID=Msa0077950-mRNA-1;Parent=Msa0077950;Name=Msa0077950-mRNA-1;_AED=0.03;_eAED=0.03;_QI=267|1|1|1|1|1|3|321|385
chr1_2 exon 55152429 55153288 55152429 ID=Msa0077950-mRNA-1:exon:17179;Parent=Msa0077950-mRNA-1
chr1_2 exon 55153395 55153587 55153395 ID=Msa0077950-mRNA-1:exon:17178;Parent=Msa0077950-mRNA-1
chr1_2 exon 55153689 55154381 55153689 ID=Msa0077950-mRNA-1:exon:17177;Parent=Msa0077950-mRNA-1
chr1_2 five_prime_UTR 55154115 55154381 55154115 ID=Msa0077950-mRNA-1:five_prime_utr;Parent=Msa0077950-mRNA-1
chr1_2 CDS 55153689 55154114 55153689 ID=Msa0077950-mRNA-1:cds;Parent=Msa0077950-mRNA-1
chr1_2 CDS 55153395 55153587 55153395 ID=Msa0077950-mRNA-1:cds;Parent=Msa0077950-mRNA-1
chr1_2 CDS 55152750 55153288 55152750 ID=Msa0077950-mRNA-1:cds;Parent=Msa0077950-mRNA-1
chr1_2 three_prime_UTR 55152429 55152749 55152429 ID=Msa0077950-mRNA-1:three_prime_utr;Parent=Msa0077950-mRNA-1
Gene Sequence

>Msa0077950

ATGTCTCCGATGAAGATCCAACCGATCGACATCGATTCAGAGAAGTTAGCCGTGGTTGTTCGAAACGACGTCGTTAAGCCTGTGTTGAAATCTCGTCTGAAAAGACTCTTCGTGTTCGACCGGCAGTTTTCAAACGCGTCAAAAACTTCCACTAACTTCTCAGAGAAACCTATCGTCGCCGGCGAAGTTCCACTTCCCGGCGACAAGTCCGATGAACCGTTTGAGCCTAGCTCCGTTGCCTTAGCAAAAATGGTGCAGAGTTTCATCGAAGAGAGTAACGAGAAACAAAATCCAGTCTCAAAACTCACTCGCAATAGATGCAACTGCTTTAACGGTAACAGTAACGATAGCTCCGACGAAGAACTTGATTTCTTCGGCGAATCTATCGCTACTGGTTCTTTCAACGATGCCGGTGACGCACTCAAGAGTTTAATACCTTGTGCGAGTGTTGCGGAGAGAAATCTCTTAGCTGATGCATCCAAAATAGTTGACAAAAACAGTAAAGTTTTCAAAGGAAAAAATGATTTGAGAAAAATCGTTGCAGAAAATCTTCAATCTCTAGGTTACGATTCTTCGATTTGCAAATCGAAATGGCACAAAACAAAATCTCATCCAGCTGGTGACTATGAATATATCGATGTGTTTGTGGAAGGTGAGAGGTTGATCATTGATATTGATTTTCGTTCGGAGTTTGAGATTGCTCGATCGACGGGAACGTTCAAGGCGATTCTTCAGTTTCTTCCTTACATTTTCGTCGGGAAATCGGATCGTCTCCGTCAGATCGTCACCGTCGTATCGGAGGCGGCGAAGCAGAGTTTGAAGAAGAAAGGAATGCCTGTCCCGCCGTGGAGGAAGTCAGAGTATATGGTAGCTAAGTGGCTCTCAACCTCCTGCAGCAGAGTGAATCCGTCTCCGTCACCGACAACCTTCGTGACAGACTCGAAGGAGGATCTGACCGGCGTTGCGTCGGAGAGTGATTGTGGTGAGTGGGAACTGATCTTCGGTGAGAAAATATCTTTGCAGGAATCGGAAACTGTCTCCGGTGGTGAGAAAATCTCACCGACGGTGGTGTTGCCGACGTGGCAATTACCGGCAGTGAAAGTAAAGAGTGTTGAGAAAGGAGCGACAGTGGTGACTGGATTTAGCCTCAAACCATAG
Protein sequence

>Msa0077950

MSPMKIQPIDIDSEKLAVVVRNDVVKPVLKSRLKRLFVFDRQFSNASKTSTNFSEKPIVAGEVPLPGDKSDEPFEPSSVALAKMVQSFIEESNEKQNPVSKLTRNRCNCFNGNSNDSSDEELDFFGESIATGSFNDAGDALKSLIPCASVAERNLLADASKIVDKNSKVFKGKNDLRKIVAENLQSLGYDSSICKSKWHKTKSHPAGDYEYIDVFVEGERLIIDIDFRSEFEIARSTGTFKAILQFLPYIFVGKSDRLRQIVTVVSEAAKQSLKKKGMPVPPWRKSEYMVAKWLSTSCSRVNPSPSPTTFVTDSKEDLTGVASESDCGEWELIFGEKISLQESETVSGGEKISPTVVLPTWQLPAVKVKSVEKGATVVTGFSLKP*