AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0130470

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0130470 MtrunA17_Chr1g0198681 93.103 667 13 2 1 665 1 636 0.0 1264
Msa0130470 MtrunA17_Chr5g0422481 70.675 607 165 5 66 661 36 640 0.0 876
Msa0130470 MtrunA17_Chr2g0282601 34.555 573 350 18 57 619 19 576 8.16e-90 292
Msa0130470 MtrunA17_Chr8g0341151 28.571 476 295 23 69 528 27 473 2.91e-36 145
Msa0130470 MtrunA17_Chr7g0236881 28.713 606 324 28 69 618 30 583 1.29e-35 144
Msa0130470 MtrunA17_Chr1g0205741 27.435 503 317 20 67 556 26 493 2.49e-33 134
Msa0130470 MtrunA17_Chr8g0340881 27.650 434 260 18 113 528 85 482 1.38e-31 131
Msa0130470 MtrunA17_Chr7g0263591 27.613 507 313 18 69 553 36 510 4.27e-31 130
Msa0130470 MtrunA17_Chr6g0487571 28.571 490 280 23 69 528 32 481 4.75e-31 129
Msa0130470 MtrunA17_Chr8g0340941 27.430 463 279 19 85 528 49 473 5.36e-31 127
Msa0130470 MtrunA17_Chr8g0340871 26.728 434 270 16 111 528 82 483 1.82e-30 128
Msa0130470 MtrunA17_Chr8g0347661 26.271 472 313 16 69 528 37 485 3.48e-30 127
Msa0130470 MtrunA17_Chr8g0341231 27.294 436 277 17 107 528 94 503 6.44e-30 125
Msa0130470 MtrunA17_Chr8g0340931 26.539 471 310 16 69 528 33 478 1.25e-29 125
Msa0130470 MtrunA17_Chr1g0181731 25.483 518 341 18 69 569 30 519 7.19e-29 123
Msa0130470 MtrunA17_Chr8g0341011 26.790 433 272 16 110 528 78 479 3.44e-27 117
Msa0130470 MtrunA17_Chr8g0340891 26.807 429 265 18 113 528 85 477 7.20e-27 116
Msa0130470 MtrunA17_Chr8g0341061 28.633 461 258 23 112 535 112 538 7.96e-27 116
Msa0130470 MtrunA17_Chr8g0340911 25.577 477 297 21 69 525 37 475 9.89e-25 110
Msa0130470 MtrunA17_Chr2g0330591 26.923 494 296 24 69 535 32 487 2.47e-24 108
Msa0130470 MtrunA17_Chr3g0123141 26.620 571 357 29 69 617 28 558 2.80e-24 108
Msa0130470 MtrunA17_Chr8g0341101 27.183 504 306 28 69 535 62 541 2.31e-23 105
Msa0130470 MtrunA17_Chr5g0411631 28.571 483 281 22 69 530 37 476 1.04e-22 103
Msa0130470 MtrunA17_Chr8g0341141 25.435 460 293 21 69 509 32 460 1.82e-22 101
Msa0130470 MtrunA17_Chr8g0341091 25.169 592 337 28 61 581 51 607 1.52e-21 99.4
Msa0130470 MtrunA17_Chr6g0479311 26.062 518 319 25 69 568 29 500 1.00e-19 93.2
Msa0130470 MtrunA17_Chr4g0044941 27.798 277 175 11 257 527 14 271 1.73e-15 77.4
Msa0130470 MtrunA17_Chr3g0123891 29.707 239 141 8 414 629 28 262 4.25e-15 79.0
Msa0130470 MtrunA17_Chr5g0439511 40.580 138 70 5 447 579 103 233 4.52e-15 77.0
Msa0130470 MtrunA17_Chr8g0358831 37.226 137 80 5 394 528 313 445 1.05e-14 77.8
Msa0130470 MtrunA17_Chr5g0439461 40.580 138 70 5 447 579 895 1025 1.28e-14 77.8
Msa0130470 MtrunA17_Chr7g0221711 34.715 193 115 7 388 574 4 191 1.38e-14 77.8
Msa0130470 MtrunA17_Chr8g0382101 34.239 184 97 6 415 578 22 201 3.38e-14 75.9
Msa0130470 MtrunA17_Chr6g0456231 33.918 171 100 6 409 575 28 189 3.83e-14 75.9
Msa0130470 MtrunA17_Chr5g0440621 34.161 161 92 7 415 571 28 178 6.27e-14 71.6
Msa0130470 MtrunA17_Chr1g0169661 38.462 143 76 5 442 579 136 271 1.20e-13 72.8
Msa0130470 MtrunA17_Chr2g0323941 36.875 160 85 6 411 566 39 186 1.65e-13 73.9
Msa0130470 MtrunA17_Chr4g0022431 34.091 176 95 7 395 566 20 178 2.71e-13 73.6
Msa0130470 MtrunA17_Chr6g0464171 35.542 166 95 6 463 620 527 688 3.21e-13 73.2
Msa0130470 MtrunA17_Chr2g0300201 34.940 166 96 6 463 620 527 688 3.44e-13 73.2
Msa0130470 MtrunA17_Chr7g0214121 32.927 164 90 8 415 571 62 212 6.28e-13 69.3
Msa0130470 MtrunA17_Chr1g0207531 32.919 161 94 7 415 571 30 180 7.86e-13 68.2
Msa0130470 MtrunA17_Chr7g0219371 41.803 122 63 4 461 578 732 849 1.01e-12 71.6
Msa0130470 MtrunA17_Chr6g0469721 38.017 121 66 4 462 578 16 131 1.14e-12 67.4
Msa0130470 MtrunA17_Chr1g0174251 38.060 134 75 3 434 566 50 176 1.24e-12 71.2
Msa0130470 MtrunA17_Chr3g0106171 40.800 125 62 4 461 579 805 923 2.01e-12 70.9
Msa0130470 MtrunA17_Chr6g0455871 40.323 124 60 5 463 579 1 117 2.07e-12 66.6
Msa0130470 MtrunA17_Chr7g0257621 34.731 167 97 6 463 620 400 563 2.15e-12 70.5
Msa0130470 MtrunA17_Chr5g0411301 40.146 137 70 5 447 578 319 448 2.58e-12 69.7
Msa0130470 MtrunA17_Chr4g0022051 40.288 139 69 6 447 579 138 268 2.79e-12 68.6
Msa0130470 MtrunA17_Chr5g0439451 41.353 133 67 5 453 579 908 1035 2.90e-12 70.5
Msa0130470 MtrunA17_Chr5g0436841 42.105 114 63 3 463 574 196 308 4.39e-12 69.7
Msa0130470 MtrunA17_Chr2g0304271 36.364 121 71 4 462 578 58 176 4.81e-12 66.6
Msa0130470 MtrunA17_Chr6g0455861 39.370 127 67 4 458 579 304 425 7.01e-12 68.6
Msa0130470 MtrunA17_Chr2g0304481 34.921 189 102 6 463 636 851 1033 7.08e-12 68.9
Msa0130470 MtrunA17_Chr5g0419961 38.168 131 71 4 453 578 449 574 7.13e-12 68.6
Msa0130470 MtrunA17_Chr6g0464161 33.735 166 98 6 463 620 256 417 7.66e-12 68.6
Msa0130470 MtrunA17_Chr6g0464211 33.133 166 99 6 463 620 526 687 7.96e-12 68.9
Msa0130470 MtrunA17_Chr6g0464211 37.273 110 63 3 447 554 74 179 1.81e-11 67.8
Msa0130470 MtrunA17_Chr1g0204461 30.588 170 109 5 415 582 41 203 8.16e-12 68.9
Msa0130470 MtrunA17_Chr1g0202011 37.410 139 73 6 447 579 2 132 8.35e-12 65.1
Msa0130470 MtrunA17_Chr1g0203251 37.037 135 82 3 458 590 956 1089 8.36e-12 68.9
Msa0130470 MtrunA17_Chr6g0463301 40.496 121 64 4 463 579 919 1035 8.70e-12 68.6
Msa0130470 MtrunA17_Chr6g0463281 37.226 137 76 5 447 579 926 1056 1.06e-11 68.6
Msa0130470 MtrunA17_Chr6g0463291 41.322 121 61 4 463 578 539 654 1.15e-11 68.2
Msa0130470 MtrunA17_Chr2g0278861 32.447 188 113 7 415 597 29 207 1.24e-11 67.8
Msa0130470 MtrunA17_Chr8g0337671 30.319 188 101 6 418 578 36 220 1.36e-11 67.8
Msa0130470 MtrunA17_Chr6g0463251 39.837 123 66 4 461 579 898 1016 1.37e-11 68.2
Msa0130470 MtrunA17_Chr6g0455801 38.406 138 75 5 446 579 728 859 1.50e-11 67.8
Msa0130470 MtrunA17_Chr2g0315081 35.333 150 86 7 410 551 27 173 1.65e-11 67.8
Msa0130470 MtrunA17_Chr8g0345471 36.154 130 70 5 411 539 27 144 1.95e-11 67.4
Msa0130470 MtrunA17_Chr5g0437741 39.130 138 73 5 418 551 78 208 2.02e-11 67.4
Msa0130470 MtrunA17_Chr5g0408801 35.542 166 95 6 463 620 527 688 2.06e-11 67.4
Msa0130470 MtrunA17_Chr2g0284851 41.880 117 60 4 466 578 65 177 2.09e-11 64.7
Msa0130470 MtrunA17_Chr5g0423871 37.705 122 67 5 418 535 49 165 2.23e-11 63.5
Msa0130470 MtrunA17_Chr6g0455851 40.000 120 68 3 462 579 819 936 2.38e-11 67.4
Msa0130470 MtrunA17_Chr2g0314841 33.553 152 85 5 414 551 28 177 2.60e-11 67.0
Msa0130470 MtrunA17_Chr4g0007291 40.000 120 62 4 464 578 562 676 2.69e-11 67.0
Msa0130470 MtrunA17_Chr5g0419221 33.939 165 97 5 463 619 526 686 2.98e-11 67.0
Msa0130470 MtrunA17_Chr1g0200911 32.558 172 103 7 414 581 30 192 3.13e-11 66.6
Msa0130470 MtrunA17_Chr7g0232211 34.965 143 78 6 415 551 34 167 3.65e-11 66.6
Msa0130470 MtrunA17_Chr7g0245221 36.552 145 82 6 411 549 27 167 4.02e-11 66.6
Msa0130470 MtrunA17_Chr2g0278831 33.140 172 102 6 414 581 32 194 4.05e-11 66.2
Msa0130470 MtrunA17_Chr8g0363221 34.503 171 102 5 463 625 391 559 4.26e-11 66.2
Msa0130470 MtrunA17_Chr2g0314821 33.333 150 87 6 414 551 29 177 4.32e-11 66.6
Msa0130470 MtrunA17_Chr4g0007211 38.168 131 71 4 453 578 902 1027 4.38e-11 66.6
Msa0130470 MtrunA17_Chr7g0250471 31.868 182 92 8 463 617 553 729 4.61e-11 66.2
Msa0130470 MtrunA17_Chr0c09g0493541 41.346 104 54 3 447 547 70 169 4.77e-11 63.9
Msa0130470 MtrunA17_Chr8g0379231 36.735 147 79 4 463 595 206 352 5.14e-11 65.5
Msa0130470 MtrunA17_Chr5g0429421 40.876 137 71 6 447 579 701 831 5.21e-11 66.2
Msa0130470 MtrunA17_Chr6g0455751 37.410 139 75 5 446 579 541 672 5.51e-11 65.9
Msa0130470 MtrunA17_Chr7g0250491 34.118 170 95 6 462 619 587 751 5.60e-11 66.2
Msa0130470 MtrunA17_Chr2g0284101 31.624 234 112 10 433 627 59 283 6.27e-11 65.5
Msa0130470 MtrunA17_Chr3g0113221 35.583 163 97 5 463 619 517 677 7.49e-11 65.9
Msa0130470 MtrunA17_Chr4g0049181 28.365 208 121 8 418 601 54 257 8.02e-11 65.1
Msa0130470 MtrunA17_Chr5g0423881 24.161 298 190 14 69 351 66 342 8.18e-11 64.7
Msa0130470 MtrunA17_Chr4g0013491 32.057 209 97 7 463 636 248 446 8.61e-11 65.5
Msa0130470 MtrunA17_Chr4g0000081 37.607 117 58 5 417 529 31 136 8.61e-11 65.1
Msa0130470 MtrunA17_Chr6g0487561 25.155 322 208 16 69 377 41 342 8.96e-11 64.3
Msa0130470 MtrunA17_Chr6g0487061 33.125 160 95 4 468 618 513 669 9.65e-11 65.5
Msa0130470 MtrunA17_Chr5g0400701 41.304 92 53 1 463 553 265 356 9.71e-11 65.5
Msa0130470 MtrunA17_Chr6g0465151 38.235 136 75 5 447 578 706 836 9.77e-11 65.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0130470 AT1G25570.1 62.604 599 217 7 65 660 28 622 0.0 758
Msa0130470 AT1G28340.1 32.733 611 359 20 66 655 28 607 3.84e-93 301
Msa0130470 AT3G46400.1 26.855 566 336 23 69 617 31 535 5.40e-35 142
Msa0130470 AT2G14440.1 27.104 594 349 27 71 645 34 562 6.90e-35 142
Msa0130470 AT1G51910.1 29.598 473 288 20 82 537 49 493 8.48e-34 139
Msa0130470 AT2G14510.2 27.066 617 323 31 69 645 40 569 1.63e-33 137
Msa0130470 AT2G14510.1 27.066 617 323 31 69 645 32 561 1.79e-33 137
Msa0130470 AT5G59670.2 27.559 508 313 23 69 555 31 504 3.82e-33 136
Msa0130470 AT5G59670.1 27.559 508 313 23 69 555 31 504 3.82e-33 136
Msa0130470 AT3G21340.2 26.518 494 308 20 69 541 36 495 8.25e-33 135
Msa0130470 AT1G51880.2 28.980 490 298 23 69 537 50 510 9.13e-33 135
Msa0130470 AT2G28990.2 28.283 495 299 25 69 541 28 488 9.98e-33 135
Msa0130470 AT2G28990.1 28.283 495 299 25 69 541 28 488 9.98e-33 135
Msa0130470 AT1G51880.1 28.862 492 296 25 69 537 32 492 1.28e-32 135
Msa0130470 AT5G59680.1 28.702 439 274 15 112 541 82 490 1.52e-32 135
Msa0130470 AT3G21340.1 26.518 494 308 20 69 541 36 495 1.56e-32 135
Msa0130470 AT3G46340.1 29.797 443 249 20 107 528 80 481 2.01e-32 134
Msa0130470 AT1G49100.1 29.120 443 271 17 112 541 82 494 5.30e-32 133
Msa0130470 AT3G19230.1 29.065 492 318 20 67 551 23 490 5.65e-32 130
Msa0130470 AT1G51880.3 28.600 500 295 24 69 537 50 518 1.63e-31 131
Msa0130470 AT2G04300.2 27.495 491 311 22 69 542 35 497 5.27e-31 130
Msa0130470 AT5G48740.1 29.317 498 264 24 69 527 24 472 1.72e-30 128
Msa0130470 AT1G05700.2 28.690 481 285 21 69 528 34 477 3.01e-30 127
Msa0130470 AT1G05700.1 28.690 481 285 21 69 528 34 477 3.78e-30 127
Msa0130470 AT1G51850.2 25.553 497 304 20 69 541 29 483 6.07e-30 127
Msa0130470 AT1G51870.2 26.802 541 304 25 37 537 5 493 6.49e-30 126
Msa0130470 AT1G51790.3 26.289 582 335 26 69 621 32 548 1.46e-29 125
Msa0130470 AT1G51790.1 26.289 582 335 26 69 621 32 548 1.46e-29 125
Msa0130470 AT2G29000.1 27.335 439 274 18 113 539 80 485 4.17e-29 124
Msa0130470 AT1G51790.2 27.459 488 287 21 69 528 32 480 4.54e-29 124
Msa0130470 AT1G07550.1 27.101 476 302 22 69 528 32 478 5.97e-29 123
Msa0130470 AT1G67720.1 26.276 529 339 20 39 551 12 505 8.97e-29 123
Msa0130470 AT5G16900.2 26.471 442 263 16 113 528 77 482 1.52e-28 121
Msa0130470 AT2G28960.2 27.400 427 269 16 111 528 82 476 2.42e-28 122
Msa0130470 AT1G51800.1 25.090 558 333 27 82 618 48 541 2.62e-28 121
Msa0130470 AT4G29990.2 25.662 491 314 21 56 528 20 477 2.67e-28 121
Msa0130470 AT5G16900.1 26.471 442 263 16 113 528 77 482 4.14e-28 121
Msa0130470 AT5G16900.3 26.471 442 263 16 113 528 77 482 4.14e-28 121
Msa0130470 AT4G29990.1 26.477 491 310 23 56 528 20 477 5.00e-28 120
Msa0130470 AT1G51850.1 25.352 497 285 20 69 541 29 463 5.43e-28 120
Msa0130470 AT3G05990.1 28.291 509 297 27 69 551 30 496 5.48e-28 119
Msa0130470 AT1G51890.2 26.943 579 314 29 69 618 28 526 5.71e-28 120
Msa0130470 AT3G46370.2 28.193 415 262 17 124 528 2 390 5.74e-28 120
Msa0130470 AT3G46370.1 28.193 415 262 17 124 528 2 390 5.74e-28 120
Msa0130470 AT1G51890.3 26.943 579 314 29 69 618 28 526 6.26e-28 120
Msa0130470 AT4G20450.1 27.333 450 293 17 111 543 84 516 7.91e-28 120
Msa0130470 AT4G20450.2 27.333 450 293 17 111 543 84 516 8.40e-28 120
Msa0130470 AT1G51890.1 26.943 579 314 29 69 618 28 526 9.68e-28 120
Msa0130470 AT3G46330.1 27.130 446 282 19 106 539 77 491 1.08e-27 119
Msa0130470 AT2G19190.1 26.742 445 252 19 113 528 83 482 1.10e-27 119
Msa0130470 AT1G51860.1 27.615 478 292 21 82 537 49 494 2.08e-27 119
Msa0130470 AT2G19210.1 26.226 530 322 22 37 541 12 497 2.52e-27 118
Msa0130470 AT2G04300.1 26.132 486 283 19 69 542 35 456 6.10e-27 117
Msa0130470 AT3G46420.1 26.434 488 290 20 69 528 32 478 8.67e-27 117
Msa0130470 AT5G59650.1 27.252 444 273 17 113 541 83 491 2.42e-26 115
Msa0130470 AT1G51805.1 26.531 441 279 18 112 541 78 484 2.48e-26 115
Msa0130470 AT2G37050.2 26.263 495 333 19 69 551 31 505 4.13e-26 114
Msa0130470 AT2G37050.4 26.263 495 333 19 69 551 31 505 4.32e-26 114
Msa0130470 AT2G37050.3 26.263 495 333 19 69 551 31 505 7.84e-26 114
Msa0130470 AT2G37050.1 26.263 495 333 19 69 551 31 505 8.04e-26 114
Msa0130470 AT1G51820.1 25.000 444 281 17 112 541 78 483 1.01e-25 113
Msa0130470 AT5G59650.2 27.273 451 272 17 113 541 83 499 1.03e-25 113
Msa0130470 AT1G07560.1 27.169 438 279 17 113 539 83 491 1.90e-25 112
Msa0130470 AT1G51805.2 26.077 441 257 19 112 541 78 460 4.13e-25 111
Msa0130470 AT2G19230.2 25.678 479 308 20 69 528 33 482 7.96e-24 107
Msa0130470 AT2G28970.2 29.067 375 231 18 179 541 5 356 1.46e-23 106
Msa0130470 AT2G19230.1 25.678 479 308 20 69 528 33 482 1.88e-23 106
Msa0130470 AT1G51810.1 28.610 367 226 15 189 541 14 358 2.46e-23 105
Msa0130470 AT4G29180.2 28.364 483 290 24 69 528 31 480 5.53e-23 105
Msa0130470 AT4G29180.3 28.364 483 290 24 69 528 31 480 5.71e-23 105
Msa0130470 AT3G46330.2 26.329 414 263 18 106 508 77 459 6.25e-23 104
Msa0130470 AT1G51870.1 25.615 488 277 22 37 490 5 440 1.91e-22 103
Msa0130470 AT2G28960.1 27.507 349 223 13 189 528 17 344 1.11e-21 100
Msa0130470 AT5G59660.3 39.333 150 86 5 394 541 284 430 4.28e-20 95.9
Msa0130470 AT1G51860.2 26.757 441 245 18 197 619 14 394 1.84e-19 93.6
Msa0130470 AT4G29450.1 27.235 481 271 20 82 528 46 481 5.42e-19 92.0
Msa0130470 AT2G28970.1 29.321 324 199 16 230 541 86 391 1.05e-17 87.8
Msa0130470 AT5G59660.1 36.242 149 89 5 394 541 284 427 1.33e-17 87.8
Msa0130470 AT5G59660.2 36.242 149 89 5 394 541 262 405 1.60e-17 87.4
Msa0130470 AT1G51820.2 33.962 159 101 4 385 541 65 221 6.73e-17 85.1
Msa0130470 AT1G51890.4 27.115 461 235 24 186 618 75 462 1.93e-16 84.0
Msa0130470 AT3G46280.1 25.627 359 223 15 66 409 24 353 5.69e-16 81.6
Msa0130470 AT5G16900.4 27.365 296 172 12 257 528 20 296 9.95e-16 81.6
Msa0130470 AT1G51830.2 29.108 213 129 8 327 528 87 288 1.76e-15 80.9
Msa0130470 AT1G51830.1 29.108 213 129 8 327 528 80 281 1.89e-15 80.5
Msa0130470 AT4G29180.1 24.949 493 277 25 69 509 31 482 4.04e-15 79.7
Msa0130470 AT3G28450.1 32.579 221 113 7 418 611 36 247 5.93e-15 79.0
Msa0130470 AT5G63710.2 30.942 223 133 9 410 623 12 222 8.64e-15 78.2
Msa0130470 AT5G63710.4 30.942 223 133 9 410 623 12 222 8.64e-15 78.2
Msa0130470 AT5G63710.1 30.942 223 133 9 410 623 47 257 9.63e-15 78.2
Msa0130470 AT5G63710.3 30.942 223 133 9 410 623 48 258 9.65e-15 78.2
Msa0130470 AT1G51890.5 31.878 229 110 10 394 618 68 254 1.26e-14 77.8
Msa0130470 AT5G21090.1 35.404 161 90 7 415 571 30 180 3.07e-14 72.8
Msa0130470 AT5G10290.1 28.137 263 155 10 415 651 30 284 5.01e-14 75.9
Msa0130470 AT5G10290.2 28.137 263 155 10 415 651 30 284 5.01e-14 75.9
Msa0130470 AT4G03390.2 35.185 162 87 7 410 566 30 178 6.88e-14 75.9
Msa0130470 AT4G03390.1 35.185 162 87 7 410 566 30 178 6.88e-14 75.9
Msa0130470 AT3G43740.1 36.646 161 88 7 415 571 30 180 7.57e-14 71.6
Msa0130470 AT5G37450.2 32.749 171 106 5 386 551 3 169 2.74e-13 73.9
Msa0130470 AT5G37450.3 32.749 171 106 5 386 551 3 169 3.54e-13 73.6
Msa0130470 AT3G46260.1 25.575 348 223 16 69 404 31 354 4.43e-13 72.4
Msa0130470 AT5G06820.1 35.429 175 95 8 405 574 21 182 4.96e-13 72.8
Msa0130470 AT3G46350.1 25.856 263 166 10 105 363 76 313 6.58e-13 71.6
Msa0130470 AT2G20850.1 34.807 181 96 9 396 566 12 180 4.27e-12 70.1
Msa0130470 AT5G49660.1 31.868 182 94 7 463 617 438 616 4.50e-12 70.1
Msa0130470 AT2G20850.2 34.807 181 96 9 396 566 12 180 5.16e-12 69.7
Msa0130470 AT5G46330.2 37.500 136 79 5 466 597 678 811 6.80e-12 69.7
Msa0130470 AT5G46330.1 37.500 136 79 5 466 597 678 811 6.80e-12 69.7
Msa0130470 AT1G72180.1 41.284 109 60 2 463 570 484 589 9.07e-12 68.9
Msa0130470 AT1G08590.1 40.541 111 62 3 463 571 510 618 1.31e-11 68.6
Msa0130470 AT1G78980.1 33.529 170 89 7 385 549 6 156 1.91e-11 67.8
Msa0130470 AT2G25440.1 35.897 117 71 3 464 578 492 606 2.50e-11 67.4
Msa0130470 AT2G33050.1 34.646 127 79 3 454 578 585 709 3.89e-11 67.0
Msa0130470 AT2G32660.1 33.858 127 80 3 454 578 400 524 4.90e-11 66.2
Msa0130470 AT1G11130.1 33.548 155 87 6 416 566 31 173 5.67e-11 66.2
Msa0130470 AT2G32660.2 33.858 127 80 3 454 578 582 706 6.52e-11 66.2
Msa0130470 AT4G13880.1 37.607 117 65 4 466 578 560 672 7.89e-11 65.9

Find 212 sgRNAs with CRISPR-Local

Find 415 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATTAAGCTTGTTGCTGTTTC+TGG 0.073874 1_3:-60721587 Msa0130470:CDS
TATCATCATGTCCTATGTTT+TGG 0.175653 1_3:-60718467 Msa0130470:CDS
CTTGGCAGTCAAGGCTTAAA+AGG 0.223624 1_3:-60720719 Msa0130470:CDS
TCTGATCTTACACTTGTATC+AGG 0.250590 1_3:+60719974 None:intergenic
AGCAAAGGCTTTAAGCTATA+TGG 0.254304 1_3:-60716909 Msa0130470:three_prime_UTR
AAATTTGAGTAGTAATGTTT+TGG 0.265295 1_3:-60721612 Msa0130470:CDS
ACCTTTGATGAATGTATATT+AGG 0.273813 1_3:-60717182 Msa0130470:three_prime_UTR
CATGCGGCTCCGGTGATCAT+TGG 0.281833 1_3:-60722018 Msa0130470:CDS
ATGCGGCTCCGGTGATCATT+GGG 0.309723 1_3:-60722017 Msa0130470:CDS
ACATGCTATAGAGGAGTAAA+AGG 0.313768 1_3:+60717437 None:intergenic
AACTTGAGTTCGAATTCCTT+GGG 0.319530 1_3:-60720030 Msa0130470:CDS
CTCCTACAACTTGGGATGCT+TGG 0.319734 1_3:-60721186 Msa0130470:CDS
CCGTCGCGTGCGGTGGATTC+AGG 0.321592 1_3:+60722220 None:intergenic
AGGAGGAGGGGAAGAAGCGG+AGG 0.324428 1_3:+60722404 None:intergenic
TGGAGTGGAGGTGGAGATGG+TGG 0.328188 1_3:+60722806 None:intergenic
AAGGAATCACTTCGAGTTCC+AGG 0.331441 1_3:-60721238 Msa0130470:CDS
TGCGCATTTGACGATGATTT+CGG 0.332297 1_3:-60717251 Msa0130470:three_prime_UTR
AGGAGGAGGAGGGGAAGAAG+CGG 0.346298 1_3:+60722401 None:intergenic
TTTAAGCTATATGGTTTCAT+AGG 0.355257 1_3:-60716900 Msa0130470:three_prime_UTR
AGAGCCGGTTAAGTGATTAT+TGG 0.355788 1_3:+60719484 None:intergenic
CCTCTGATATTTGTTTCTCT+TGG 0.359314 1_3:+60717517 None:intergenic
TTTCTTTATCATGCTTTACT+TGG 0.362445 1_3:+60716994 None:intergenic
TCCTACAACTTGGGATGCTT+GGG 0.368392 1_3:-60721185 Msa0130470:CDS
CAATTTCTTCCGGTTCGGTT+CGG 0.369881 1_3:+60721933 None:intergenic
CGGCTCTATACCTGACAGTT+TGG 0.381864 1_3:-60719468 Msa0130470:CDS
AAAAGATGGGGTTGGAGTGG+AGG 0.382859 1_3:+60722794 None:intergenic
TTCATTAAAACATGCTATAG+AGG 0.383586 1_3:+60717428 None:intergenic
TAAGAAGGAGAGGAAGAAAT+GGG 0.386032 1_3:+60722842 None:intergenic
ATCAGTATCGTTGGTGAAGC+CGG 0.386261 1_3:+60721991 None:intergenic
GAACTTGAGTTCGAATTCCT+TGG 0.395989 1_3:-60720031 Msa0130470:CDS
TGTACTCACCCATTACTTCA+TGG 0.396316 1_3:+60718313 None:intergenic
TTATCCAATAATCACTTAAC+CGG 0.398157 1_3:-60719488 Msa0130470:CDS
CCTACCACTCACCCTCTTCA+AGG 0.409537 1_3:-60721515 Msa0130470:intron
ATGAGTATGTGTTAATGTTA+TGG 0.409943 1_3:-60716942 Msa0130470:three_prime_UTR
CACTAAACTCGCAGCTGAAA+TGG 0.410465 1_3:+60717140 None:intergenic
AAAAGGAACGATTATGACTT+TGG 0.411238 1_3:-60718342 Msa0130470:CDS
AAAACTCTGACAATTTCTTC+CGG 0.411927 1_3:+60721923 None:intergenic
ATAAGAAGGAGAGGAAGAAA+TGG 0.412283 1_3:+60722841 None:intergenic
AGCTTCATCGGAAAATAATT+CGG 0.412400 1_3:+60721863 None:intergenic
TCTGGTGCTCCTTTGATTTG+TGG 0.414322 1_3:-60721569 Msa0130470:CDS
AGATGGGGTTGGAGTGGAGG+TGG 0.414531 1_3:+60722797 None:intergenic
GGTTGGAGTGGAGGTGGAGA+TGG 0.415435 1_3:+60722803 None:intergenic
ATCCTTGTGCTCCTACAACT+TGG 0.426893 1_3:-60721195 Msa0130470:CDS
ATCATTGATGATTCTTGAGC+TGG 0.430224 1_3:-60717489 Msa0130470:CDS
TTTCCGAGGGGAGGTTGAAC+CGG 0.432054 1_3:+60722431 None:intergenic
TCATACGAAGCGGAATTTAC+AGG 0.433583 1_3:+60722091 None:intergenic
CTTTATTCTGTTGGCGTGCA+CGG 0.435292 1_3:-60719020 Msa0130470:CDS
TCTGACAATTTCTTCCGGTT+CGG 0.435633 1_3:+60721928 None:intergenic
TAGTTACCAGAGGGAAAAGA+TGG 0.437942 1_3:+60722780 None:intergenic
GGAGAGCCATGTTGTGTTGA+AGG 0.442022 1_3:+60722501 None:intergenic
CTTCATCCGGCTGCCATGAC+CGG 0.442238 1_3:+60721960 None:intergenic
GACGGTGGTGGTGGCGCCGC+CGG 0.442389 1_3:+60722465 None:intergenic
AGTTCGATTGATGAGATGAT+TGG 0.451063 1_3:+60722118 None:intergenic
GGTCTACCCCATGAAGTAAT+GGG 0.451649 1_3:-60718321 Msa0130470:intron
CCTCCGTCGTCACCGCCGTT+TGG 0.452443 1_3:+60721837 None:intergenic
TTTCTGCGTGGTACTGCTGC+TGG 0.454474 1_3:-60718385 Msa0130470:CDS
GCGTGCGGTGGATTCAGGCC+AGG 0.456249 1_3:+60722225 None:intergenic
ACTTCGAGTTCCAGGTAGAA+TGG 0.457010 1_3:-60721230 Msa0130470:CDS
GGATGCAAAGATGGACTATA+TGG 0.457290 1_3:-60721786 Msa0130470:CDS
GTTGAAGATGCCAAACTGTC+AGG 0.460099 1_3:+60719458 None:intergenic
ACCAACGATACTGATAAATT+CGG 0.463808 1_3:-60721983 Msa0130470:CDS
GTAGCGAGAAGAGGGAAGTG+AGG 0.465988 1_3:+60722351 None:intergenic
TTCTTCCCCTCCTCCTCCTC+CGG 0.466228 1_3:-60722397 Msa0130470:CDS
GCCGCTGATCTTTGCTTCTA+CGG 0.466510 1_3:-60722157 Msa0130470:CDS
TCCGGTGATCATTGGGGCGC+CGG 0.466791 1_3:-60722010 Msa0130470:CDS
GAAGCAAAGATCAGCGGCGG+AGG 0.466839 1_3:+60722162 None:intergenic
TTCTTTATCATGCTTTACTT+GGG 0.467409 1_3:+60716995 None:intergenic
GGGAAAAGATGGGGTTGGAG+TGG 0.469522 1_3:+60722791 None:intergenic
GTTGATATTTACAAAGAAGT+GGG 0.471309 1_3:-60721671 Msa0130470:CDS
TGAATTACATTTCAGTAATG+AGG 0.471503 1_3:+60721122 None:intergenic
TACAACTTGGGATGCTTGGG+AGG 0.479371 1_3:-60721182 Msa0130470:CDS
GATTCGAGTGTGAAGAAAGA+AGG 0.479628 1_3:-60721740 Msa0130470:CDS
AAGTGCTATGAAGGCATTGA+AGG 0.484278 1_3:-60721257 Msa0130470:CDS
CGTGCGGTGGATTCAGGCCA+GGG 0.484927 1_3:+60722226 None:intergenic
CCAGAGCAACTTTATTCTGT+TGG 0.485444 1_3:-60719029 Msa0130470:CDS
GTACTCACCCATTACTTCAT+GGG 0.485738 1_3:+60718314 None:intergenic
TATGGTGTGGCTGCATTTCG+CGG 0.487390 1_3:-60721768 Msa0130470:CDS
TGAAGCATTCCGAACCGAAC+CGG 0.490845 1_3:-60721942 Msa0130470:CDS
ATTTCGGACCATCGTATAAG+AGG 0.490999 1_3:-60717235 Msa0130470:three_prime_UTR
TGGCTCCGAGACGGTGGTGG+TGG 0.492848 1_3:+60722456 None:intergenic
ATTCGGCCGGTCATGGCAGC+CGG 0.496081 1_3:-60721966 Msa0130470:CDS
TGGTCTACCCCATGAAGTAA+TGG 0.496519 1_3:-60718322 Msa0130470:CDS
CTGATAAATTCGGCCGGTCA+TGG 0.496522 1_3:-60721973 Msa0130470:CDS
CTTCGAGTTCCAGGTAGAAT+GGG 0.496674 1_3:-60721229 Msa0130470:CDS
GCATTGCGTCAAGGTCGAGC+AGG 0.501427 1_3:+60717320 None:intergenic
AGTGGAGGTGGAGATGGTGG+TGG 0.501594 1_3:+60722809 None:intergenic
ATTGAGCGTGGATGCAAAGA+TGG 0.502833 1_3:-60721795 Msa0130470:CDS
CGGAGGAGGTAGCGAGAAGA+GGG 0.505653 1_3:+60722343 None:intergenic
TGTGAAGAAAGAAGGAGAGA+GGG 0.506708 1_3:-60721732 Msa0130470:CDS
TCCGATGAAGCTTTACCAAA+CGG 0.508588 1_3:-60721852 Msa0130470:CDS
GTAACACAGTTGTAGCAATA+CGG 0.509893 1_3:+60716872 None:intergenic
CCATTCCATCCCATTCTACC+TGG 0.511572 1_3:+60721220 None:intergenic
GCTATTGAATGGTAACCTAC+TGG 0.511811 1_3:-60719063 Msa0130470:CDS
TTCAGAAATCTTGGCAGTCA+AGG 0.513349 1_3:-60720728 Msa0130470:intron
AAAAGGTGAAGGGAATCCTT+TGG 0.514538 1_3:+60717454 None:intergenic
GGGTGAAATACCATCAGGAC+TGG 0.514731 1_3:-60720007 Msa0130470:CDS
AGACGGTGAAGGTGCGGAGG+AGG 0.514997 1_3:+60722329 None:intergenic
TCGGTTCGGAATGCTTCATC+CGG 0.517203 1_3:+60721947 None:intergenic
GTGTGAAGAAAGAAGGAGAG+AGG 0.518614 1_3:-60721733 Msa0130470:CDS
GCCGCAGTTAATGTGGTATG+AGG 0.519419 1_3:+60722546 None:intergenic
GGTAGAGTTTCATGCGGCTC+CGG 0.524047 1_3:-60722028 Msa0130470:CDS
AGCATGGCGGATTATCGACT+CGG 0.525538 1_3:-60718443 Msa0130470:CDS
TCAACGGAGAACACCGTGAA+TGG 0.527046 1_3:-60721899 Msa0130470:CDS
TCCCAAGCATCCCAAGTTGT+AGG 0.527416 1_3:+60721184 None:intergenic
TAGCGAGAAGAGGGAAGTGA+GGG 0.529313 1_3:+60722352 None:intergenic
AACTTCATTCTTGTTAACTA+CGG 0.533727 1_3:-60722049 Msa0130470:CDS
TTGGCAGTCAAGGCTTAAAA+GGG 0.533821 1_3:-60720718 Msa0130470:CDS
AGTTGATATTTACAAAGAAG+TGG 0.534872 1_3:-60721672 Msa0130470:CDS
GAGAGTGCGACGTCGAAGGA+AGG 0.540244 1_3:+60722277 None:intergenic
TCCTTGTGCTCCTACAACTT+GGG 0.540389 1_3:-60721194 Msa0130470:CDS
GAGAGCCATGTTGTGTTGAA+GGG 0.540481 1_3:+60722502 None:intergenic
AACGGCGGTGACGACGGAGG+AGG 0.541688 1_3:-60721834 Msa0130470:CDS
GCCGAATTTATCAGTATCGT+TGG 0.543701 1_3:+60721982 None:intergenic
CGGCGCCACCACCACCGTCT+CGG 0.543708 1_3:-60722461 Msa0130470:CDS
GAGTGGCTCCGAGACGGTGG+TGG 0.548946 1_3:+60722453 None:intergenic
TGCGTCGTAGTTGTCGTAGA+CGG 0.549286 1_3:+60722312 None:intergenic
GCCGTTTGGTAAAGCTTCAT+CGG 0.551037 1_3:+60721851 None:intergenic
GTCTCTGCCAGGCTATTGAA+TGG 0.551585 1_3:-60719074 Msa0130470:intron
ATATCTACATCAGAAAGAAA+AGG 0.551812 1_3:-60718359 Msa0130470:CDS
GTGCGGTGGATTCAGGCCAG+GGG 0.553161 1_3:+60722227 None:intergenic
CCTTGAAGAGGGTGAGTGGT+AGG 0.553278 1_3:+60721515 None:intergenic
GGAACGCCAGTTGAAAATGA+TGG 0.553751 1_3:+60722249 None:intergenic
GGAGGAGGGGAAGAAGCGGA+GGG 0.553757 1_3:+60722405 None:intergenic
TGGCGCCGCCGGTGTAGTAA+CGG 0.555587 1_3:+60722476 None:intergenic
CCAACAGAATAAAGTTGCTC+TGG 0.556512 1_3:+60719029 None:intergenic
TATAGAGGAGTAAAAGGTGA+AGG 0.556956 1_3:+60717443 None:intergenic
TGATGAGATGATTGGAGCAT+CGG 0.557133 1_3:+60722126 None:intergenic
GTAGTTGTCGTAGACGGTGA+AGG 0.560473 1_3:+60722318 None:intergenic
GGTGAAATACCATCAGGACT+GGG 0.562074 1_3:-60720006 Msa0130470:CDS
CCAGGTAGAATGGGATGGAA+TGG 0.563862 1_3:-60721220 Msa0130470:CDS
TCCTAATATACATTCATCAA+AGG 0.565418 1_3:+60717181 None:intergenic
CTGATCTTACACTTGTATCA+GGG 0.565959 1_3:+60719975 None:intergenic
CCTGAATCCACCGCACGCGA+CGG 0.571153 1_3:-60722220 Msa0130470:CDS
CCGCCATGCTCCCAAAACAT+AGG 0.571259 1_3:+60718456 None:intergenic
AAGAAGGAGAGGAAGAAATG+GGG 0.572907 1_3:+60722843 None:intergenic
GGAGGAGAGTGCGACGTCGA+AGG 0.573090 1_3:+60722273 None:intergenic
CCAGAGGGAAAAGATGGGGT+TGG 0.573200 1_3:+60722786 None:intergenic
TCAGCTGCGAGTTTAGTGTC+CGG 0.573250 1_3:-60717135 Msa0130470:three_prime_UTR
GAGTTCCAGGTAGAATGGGA+TGG 0.574326 1_3:-60721225 Msa0130470:CDS
ATTCAGTCTCTCAAGCAACA+AGG 0.574855 1_3:-60718511 Msa0130470:intron
TTCAGTCTCTCAAGCAACAA+GGG 0.575617 1_3:-60718510 Msa0130470:intron
GCGGAGGAGGTAGCGAGAAG+AGG 0.577616 1_3:+60722342 None:intergenic
CTTGAGTTCGAATTCCTTGG+GGG 0.580805 1_3:-60720028 Msa0130470:CDS
GCCGGCGCCCCAATGATCAC+CGG 0.581569 1_3:+60722009 None:intergenic
ACAACTTGGGATGCTTGGGA+GGG 0.582549 1_3:-60721181 Msa0130470:CDS
TATTCTGTTGGCGTGCACGG+TGG 0.583936 1_3:-60719017 Msa0130470:CDS
TGATGATGAATAAGAAGGAG+AGG 0.585170 1_3:+60722832 None:intergenic
CCAGTTGAAAATGATGGTGG+AGG 0.589159 1_3:+60722255 None:intergenic
ACCAAACATGCAAAAGTACT+CGG 0.590863 1_3:+60722752 None:intergenic
AAGCAAAGATCAGCGGCGGA+GGG 0.590897 1_3:+60722163 None:intergenic
AGCATAAGCACCGTCGCGTG+CGG 0.591854 1_3:+60722210 None:intergenic
ATAGAGGAGTAAAAGGTGAA+GGG 0.593612 1_3:+60717444 None:intergenic
CATTGCGTCAAGGTCGAGCA+GGG 0.593861 1_3:+60717321 None:intergenic
TATGGCAGTTGTAGTAGCAA+AGG 0.594285 1_3:-60716924 Msa0130470:three_prime_UTR
CCGGAGTGGCTCCGAGACGG+TGG 0.594828 1_3:+60722450 None:intergenic
ATAAGCACCGTCGCGTGCGG+TGG 0.595407 1_3:+60722213 None:intergenic
ACTCCGGTTCAACCTCCCCT+CGG 0.596263 1_3:-60722434 Msa0130470:CDS
CTGGCACTCGTCCTTCCAGT+AGG 0.596614 1_3:+60719048 None:intergenic
CCACCGTCTCGGAGCCACTC+CGG 0.597531 1_3:-60722450 Msa0130470:CDS
GCCGCCGGTGTAGTAACGGT+CGG 0.600805 1_3:+60722480 None:intergenic
GAACCGGAGTGGCTCCGAGA+CGG 0.601754 1_3:+60722447 None:intergenic
TCAAGCAACAAGGGTTTGTG+TGG 0.602353 1_3:-60718501 Msa0130470:CDS
AATAATTCAATGTAAGCTTG+TGG 0.605271 1_3:-60717347 Msa0130470:three_prime_UTR
TACTCACCCATTACTTCATG+GGG 0.605464 1_3:+60718315 None:intergenic
TCGTATGATTCTAACTCCAC+CGG 0.607134 1_3:-60722076 Msa0130470:CDS
AGTTACCAGAGGGAAAAGAT+GGG 0.609275 1_3:+60722781 None:intergenic
GCATGGCGGATTATCGACTC+GGG 0.609811 1_3:-60718442 Msa0130470:CDS
TCCCAAGTTGTAGGAGCACA+AGG 0.610664 1_3:+60721193 None:intergenic
AGCAGCATTGCATTGCGTCA+AGG 0.615385 1_3:+60717311 None:intergenic
TTCTCAATACCACAAATCAA+AGG 0.615729 1_3:+60721560 None:intergenic
ACTTGAGTTCGAATTCCTTG+GGG 0.621379 1_3:-60720029 Msa0130470:CDS
CAGACCCCTTCAACACAACA+TGG 0.622219 1_3:-60722507 Msa0130470:CDS
ACGGCATGCCTCTTATACGA+TGG 0.622369 1_3:+60717227 None:intergenic
TGGTATTGAGAATTATGCAT+TGG 0.622429 1_3:-60721549 Msa0130470:CDS
AGAGCCATGTTGTGTTGAAG+GGG 0.622435 1_3:+60722503 None:intergenic
TGTCGTAGACGGTGAAGGTG+CGG 0.624271 1_3:+60722323 None:intergenic
TTACCAAACGGCGGTGACGA+CGG 0.624674 1_3:-60721840 Msa0130470:CDS
GAGGGGAGGTTGAACCGGAG+TGG 0.624978 1_3:+60722436 None:intergenic
TTGAAGTGCCGCAGTTAATG+TGG 0.625396 1_3:+60722539 None:intergenic
CGTAGACGGTGAAGGTGCGG+AGG 0.629380 1_3:+60722326 None:intergenic
CAAACTGTCAGGTATAGAGC+CGG 0.630464 1_3:+60719469 None:intergenic
AAAACCTTGAAGAGGGTGAG+TGG 0.632599 1_3:+60721511 None:intergenic
CTCGGTAGAGTAGTTACCAG+AGG 0.632967 1_3:+60722770 None:intergenic
TTGAGTTCGAATTCCTTGGG+GGG 0.633440 1_3:-60720027 Msa0130470:CDS
GACGACGGAGGAGGAGACGT+TGG 0.639543 1_3:-60721825 Msa0130470:CDS
AGTGCGACGTCGAAGGAAGG+AGG 0.640604 1_3:+60722280 None:intergenic
CTGGAGAGTCAACACGCCAA+AGG 0.643105 1_3:-60717470 Msa0130470:CDS
CTCTCCGACCGTTACTACAC+CGG 0.643735 1_3:-60722484 Msa0130470:CDS
TGCGGTGGATTCAGGCCAGG+GGG 0.643789 1_3:+60722228 None:intergenic
GGTGGTGATGATGAATAAGA+AGG 0.644775 1_3:+60722827 None:intergenic
ATCGTATAAGAGGCATGCCG+TGG 0.648585 1_3:-60717225 Msa0130470:three_prime_UTR
ACGCCAGTTGAAAATGATGG+TGG 0.648693 1_3:+60722252 None:intergenic
GCCGTAGAAGCAAAGATCAG+CGG 0.649920 1_3:+60722156 None:intergenic
ACGATACTGATAAATTCGGC+CGG 0.650645 1_3:-60721979 Msa0130470:CDS
CCAAGAGAAACAAATATCAG+AGG 0.652998 1_3:-60717517 Msa0130470:CDS
GTAGAAGCAAAGATCAGCGG+CGG 0.656543 1_3:+60722159 None:intergenic
TTGAATGGTAACCTACTGGA+AGG 0.662357 1_3:-60719059 Msa0130470:CDS
TGCGGCTCCGGTGATCATTG+GGG 0.670365 1_3:-60722016 Msa0130470:CDS
CCAAACGGCGGTGACGACGG+AGG 0.673808 1_3:-60721837 Msa0130470:CDS
ATAGGACATGATGATAGAGA+TGG 0.675366 1_3:+60718474 None:intergenic
TCGGTAGAGTAGTTACCAGA+GGG 0.678092 1_3:+60722771 None:intergenic
TCCGACCGTTACTACACCGG+CGG 0.678732 1_3:-60722481 Msa0130470:CDS
AACTACGGTAGAGTTTCATG+CGG 0.688627 1_3:-60722034 Msa0130470:CDS
GTTACCAGAGGGAAAAGATG+GGG 0.689689 1_3:+60722782 None:intergenic
TCCTCATACCACATTAACTG+CGG 0.690190 1_3:-60722547 Msa0130470:CDS
GGAGTTAGAATCATACGAAG+CGG 0.698239 1_3:+60722081 None:intergenic
AATGCTGCTTCATCACAATG+AGG 0.704080 1_3:-60717297 Msa0130470:three_prime_UTR
GTTGGAGTACGAATTGAGCG+TGG 0.709763 1_3:-60721807 Msa0130470:CDS
GAATGCTAGTGATATTACCA+CGG 0.722719 1_3:+60717208 None:intergenic
GATGAAGCTTTACCAAACGG+CGG 0.725813 1_3:-60721849 Msa0130470:CDS
CATGGCGGATTATCGACTCG+GGG 0.727844 1_3:-60718441 Msa0130470:CDS
CAAAGATGGACTATATGGTG+TGG 0.740460 1_3:-60721781 Msa0130470:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTCTTTTCATAATATTTTC+AGG - chr1_3:60717143-60717162 Msa0130470:three_prime_UTR 15.0%
!! GAAAAGTTACAATTATATAA+CGG + chr1_3:60719656-60719675 None:intergenic 15.0%
!!! TAACTTTTCTTTAATTTTAC+AGG - chr1_3:60719667-60719686 Msa0130470:intron 15.0%
!! TTTATAATTGTAAATGACTT+TGG + chr1_3:60720018-60720037 None:intergenic 15.0%
!!! ATTTAATTAAATTTTCCTTC+TGG + chr1_3:60720162-60720181 None:intergenic 15.0%
!!! TTTTTTTTACAAAAGCAAAA+AGG + chr1_3:60720836-60720855 None:intergenic 15.0%
!! AGATTAATGTAAATTCAAAA+TGG + chr1_3:60720882-60720901 None:intergenic 15.0%
!! ATTTACATTAATCTATTTGA+AGG - chr1_3:60720888-60720907 Msa0130470:intron 15.0%
!! ACTATAATTGTTATCTAATA+TGG - chr1_3:60721063-60721082 Msa0130470:intron 15.0%
!!! TTTTTTCATTACTAATTGTT+TGG - chr1_3:60721565-60721584 Msa0130470:CDS 15.0%
!!! TAAATATGTTTTGTACATAT+AGG - chr1_3:60721680-60721699 Msa0130470:CDS 15.0%
!!! TTCATAAATCTGATTTTAAT+CGG - chr1_3:60721786-60721805 Msa0130470:CDS 15.0%
!!! ATTTCATTTTGCAAAAGTTA+CGG + chr1_3:60717050-60717069 None:intergenic 20.0%
!!! GACATAATTCATAGTAATTT+TGG - chr1_3:60717074-60717093 Msa0130470:three_prime_UTR 20.0%
!!! AAATTTGAGTAGTAATGTTT+TGG - chr1_3:60718108-60718127 Msa0130470:intron 20.0%
!!! AATTTGAGTAGTAATGTTTT+GGG - chr1_3:60718109-60718128 Msa0130470:intron 20.0%
!! TTTGAATTAGTAAATATGCA+TGG - chr1_3:60718707-60718726 Msa0130470:intron 20.0%
!!! TATTTTCATTTCAGAAATCT+TGG - chr1_3:60718983-60719002 Msa0130470:intron 20.0%
!! ATATCATCTAAAAAAAGACT+AGG + chr1_3:60719796-60719815 None:intergenic 20.0%
!! TTCTAAATGAGTGAAAATAT+TGG + chr1_3:60719881-60719900 None:intergenic 20.0%
!!! TTTTCATACATATCTTTTCT+AGG - chr1_3:60719969-60719988 Msa0130470:intron 20.0%
!! TTGAAATCAAATTTCAAAAC+TGG + chr1_3:60720413-60720432 None:intergenic 20.0%
!! TAAATATACGAAGAGAAATA+CGG + chr1_3:60720535-60720554 None:intergenic 20.0%
!!! TTTGCTATAATCTACATTTT+TGG - chr1_3:60720745-60720764 Msa0130470:intron 20.0%
!!! TGCTTCTTTTATTTGTTTTA+CGG - chr1_3:60720943-60720962 Msa0130470:intron 20.0%
!!! ATTTTTGTTTTTACTATTCC+TGG - chr1_3:60721464-60721483 Msa0130470:intron 20.0%
!! GATTAAAATCAGATTTATGA+AGG + chr1_3:60721787-60721806 None:intergenic 20.0%
!!! TCATAAATCTGATTTTAATC+GGG - chr1_3:60721787-60721806 Msa0130470:CDS 20.0%
!! AAAAGAATGAATCACTATAA+AGG + chr1_3:60721904-60721923 None:intergenic 20.0%
!!! AAAATAAACTTTTCACATGA+AGG + chr1_3:60722052-60722071 None:intergenic 20.0%
!! GGAATAAAAAGTTGTATTTA+TGG - chr1_3:60722116-60722135 Msa0130470:CDS 20.0%
! AACTTCATTCTTGTTAACTA+CGG - chr1_3:60717671-60717690 Msa0130470:intron 25.0%
!!! AATTGTCAGAGTTTTATCAA+CGG - chr1_3:60717805-60717824 Msa0130470:intron 25.0%
!! GTTTTTGATGTGTTTATCAA+TGG - chr1_3:60718010-60718029 Msa0130470:intron 25.0%
!! AGTTGATATTTACAAAGAAG+TGG - chr1_3:60718048-60718067 Msa0130470:intron 25.0%
! GTTGATATTTACAAAGAAGT+GGG - chr1_3:60718049-60718068 Msa0130470:intron 25.0%
!! ATTTGAGTAGTAATGTTTTG+GGG - chr1_3:60718110-60718129 Msa0130470:intron 25.0%
! AGAAAGAAAATACTTGTAAG+AGG + chr1_3:60718236-60718255 None:intergenic 25.0%
! TTGAATATAACCACATTTGT+TGG + chr1_3:60718336-60718355 None:intergenic 25.0%
! TGAATTACATTTCAGTAATG+AGG + chr1_3:60718601-60718620 None:intergenic 25.0%
! AATGGTAGAATAGGTTTAAT+TGG - chr1_3:60718857-60718876 Msa0130470:intron 25.0%
! AGGTTTAATTGGTAGAAAAA+TGG - chr1_3:60718868-60718887 Msa0130470:intron 25.0%
!! ATAACATTTTCCTTGCATAA+TGG - chr1_3:60718928-60718947 Msa0130470:intron 25.0%
! ATGCAAGATGTAAAGAAATT+AGG + chr1_3:60719089-60719108 None:intergenic 25.0%
!! TAATTTTACCACATGTTTAG+TGG - chr1_3:60719179-60719198 Msa0130470:intron 25.0%
!!! AAAGCTGATCATTTTGAAAA+AGG + chr1_3:60719260-60719279 None:intergenic 25.0%
!!! TTTTTCAAAATGATCAGCTT+TGG - chr1_3:60719259-60719278 Msa0130470:intron 25.0%
! ACAATATTTATCTTCTGATG+TGG - chr1_3:60719301-60719320 Msa0130470:intron 25.0%
! GATAGAATAATGATGTACAA+TGG - chr1_3:60719335-60719354 Msa0130470:intron 25.0%
! AGGGAAAATAAATTCAGAAA+AGG + chr1_3:60719443-60719462 None:intergenic 25.0%
!! AATTTTTGTCATGTCTATAG+TGG - chr1_3:60719627-60719646 Msa0130470:intron 25.0%
!! ATTTTTGTCATGTCTATAGT+GGG - chr1_3:60719628-60719647 Msa0130470:intron 25.0%
! CAATCATCATATACTGAATA+CGG - chr1_3:60719918-60719937 Msa0130470:intron 25.0%
! TTATCCAATAATCACTTAAC+CGG - chr1_3:60720232-60720251 Msa0130470:intron 25.0%
! ATGATAACTCGACAATAAAA+AGG - chr1_3:60720353-60720372 Msa0130470:intron 25.0%
! ATTAACAAAACCAAATGACT+AGG + chr1_3:60720445-60720464 None:intergenic 25.0%
! TTCGAAGAATTATGAAACTT+GGG + chr1_3:60720781-60720800 None:intergenic 25.0%
!!! GCTTCTTTTATTTGTTTTAC+GGG - chr1_3:60720944-60720963 Msa0130470:intron 25.0%
! ATAATTCATGACAAACTTAC+CGG - chr1_3:60720999-60721018 Msa0130470:intron 25.0%
! ATATCTACATCAGAAAGAAA+AGG - chr1_3:60721361-60721380 Msa0130470:intron 25.0%
! TAAATATAAACCACATTACC+AGG + chr1_3:60721485-60721504 None:intergenic 25.0%
! TTACTAATTGTTTGGTATCA+TGG - chr1_3:60721573-60721592 Msa0130470:CDS 25.0%
!! TGTTTTGTACATATAGGATT+TGG - chr1_3:60721686-60721705 Msa0130470:CDS 25.0%
!! GGAATTTGGTGAAATTTAAA+AGG + chr1_3:60722078-60722097 None:intergenic 25.0%
!! TGCTAATTGTCAAGTTTTTA+TGG - chr1_3:60722159-60722178 Msa0130470:CDS 25.0%
! TTCATTAAAACATGCTATAG+AGG + chr1_3:60722295-60722314 None:intergenic 25.0%
! AATAATTCAATGTAAGCTTG+TGG - chr1_3:60722373-60722392 Msa0130470:CDS 25.0%
! ACCTTTGATGAATGTATATT+AGG - chr1_3:60722538-60722557 Msa0130470:CDS 25.0%
! TCCTAATATACATTCATCAA+AGG + chr1_3:60722542-60722561 None:intergenic 25.0%
!!! TTTTTCAAGTTACATCAACT+TGG - chr1_3:60722608-60722627 Msa0130470:intron 25.0%
! TTCTTTATCATGCTTTACTT+GGG + chr1_3:60722728-60722747 None:intergenic 25.0%
! TTTCTTTATCATGCTTTACT+TGG + chr1_3:60722729-60722748 None:intergenic 25.0%
! ATGAGTATGTGTTAATGTTA+TGG - chr1_3:60722778-60722797 Msa0130470:CDS 25.0%
! TTTAAGCTATATGGTTTCAT+AGG - chr1_3:60722820-60722839 Msa0130470:CDS 25.0%
! AACAAGAATGAAGTTTTCAC+CGG + chr1_3:60717666-60717685 None:intergenic 30.0%
ACCAACGATACTGATAAATT+CGG - chr1_3:60717737-60717756 Msa0130470:intron 30.0%
AAAACTCTGACAATTTCTTC+CGG + chr1_3:60717800-60717819 None:intergenic 30.0%
!!! TTCTTTTTCAGTACCATTCA+CGG + chr1_3:60717837-60717856 None:intergenic 30.0%
AGCTTCATCGGAAAATAATT+CGG + chr1_3:60717860-60717879 None:intergenic 30.0%
TTCTCAATACCACAAATCAA+AGG + chr1_3:60718163-60718182 None:intergenic 30.0%
! TGGTATTGAGAATTATGCAT+TGG - chr1_3:60718171-60718190 Msa0130470:intron 30.0%
TTTCGTATTGAAGATGTGTA+TGG - chr1_3:60718269-60718288 Msa0130470:intron 30.0%
!! CAGTTTTATCATCACTCATA+CGG + chr1_3:60718574-60718593 None:intergenic 30.0%
AGAACAAAATAGCAGAAAAG+TGG + chr1_3:60718630-60718649 None:intergenic 30.0%
! TACCATCTGATCATTTTATG+AGG - chr1_3:60718737-60718756 Msa0130470:intron 30.0%
TTCCTCATAAAATGATCAGA+TGG + chr1_3:60718742-60718761 None:intergenic 30.0%
! ATCTGATCATTTTATGAGGA+AGG - chr1_3:60718741-60718760 Msa0130470:intron 30.0%
TTAACCTTACACTTGACTAA+AGG + chr1_3:60718839-60718858 None:intergenic 30.0%
TTAGTCAAGTGTAAGGTTAA+TGG - chr1_3:60718839-60718858 Msa0130470:intron 30.0%
TGTAAGGTTAATGGTAGAAT+AGG - chr1_3:60718848-60718867 Msa0130470:intron 30.0%
!!! GATTAGTCTTTTGTCAGATT+TGG - chr1_3:60719039-60719058 Msa0130470:CDS 30.0%
GAAGATAAATATTGTAGCCA+CGG + chr1_3:60719296-60719315 None:intergenic 30.0%
ATTAAAATCCTTGCAATTGC+TGG + chr1_3:60719400-60719419 None:intergenic 30.0%
GGTTTACACTAGAATATGTA+AGG + chr1_3:60719485-60719504 None:intergenic 30.0%
TGTTAAAGAACTCAATTGAG+TGG - chr1_3:60719831-60719850 Msa0130470:intron 30.0%
!! TGACTTTGGAGTTTAAATTC+AGG + chr1_3:60720004-60720023 None:intergenic 30.0%
! ACTATGAAGTGCTCAATAAA+TGG - chr1_3:60720077-60720096 Msa0130470:intron 30.0%
! CTATGAAGTGCTCAATAAAT+GGG - chr1_3:60720078-60720097 Msa0130470:intron 30.0%
! TATGAAGTGCTCAATAAATG+GGG - chr1_3:60720079-60720098 Msa0130470:intron 30.0%
! TTTCTCTGTAATGTTTCTGT+AGG - chr1_3:60720206-60720225 Msa0130470:intron 30.0%
! TTCTCTGTAATGTTTCTGTA+GGG - chr1_3:60720207-60720226 Msa0130470:intron 30.0%
CAAATTTCAAAACTGGATTG+CGG + chr1_3:60720406-60720425 None:intergenic 30.0%
AATCATCTTTCCTAGTCATT+TGG - chr1_3:60720432-60720451 Msa0130470:intron 30.0%
! TGTTGCCAATATATTTTTCC+TGG - chr1_3:60720484-60720503 Msa0130470:intron 30.0%
CAGATCCAGGAAAAATATAT+TGG + chr1_3:60720492-60720511 None:intergenic 30.0%
! CAATATATTTTTCCTGGATC+TGG - chr1_3:60720490-60720509 Msa0130470:intron 30.0%
CTTCGAAGAATTATGAAACT+TGG + chr1_3:60720782-60720801 None:intergenic 30.0%
TTTATGCTGCACATTATCAA+AGG - chr1_3:60721113-60721132 Msa0130470:intron 30.0%
! TATCATCATGTCCTATGTTT+TGG - chr1_3:60721253-60721272 Msa0130470:CDS 30.0%
! ATCATCATGTCCTATGTTTT+GGG - chr1_3:60721254-60721273 Msa0130470:CDS 30.0%
AAAAGGAACGATTATGACTT+TGG - chr1_3:60721378-60721397 Msa0130470:intron 30.0%
!! TTTTACTATTCCTGGTAATG+TGG - chr1_3:60721472-60721491 Msa0130470:intron 30.0%
ATGAAAAAACAGCTATTGCA+CGG + chr1_3:60721554-60721573 None:intergenic 30.0%
TCTTCAATGTTCATGCAAAA+AGG + chr1_3:60721761-60721780 None:intergenic 30.0%
! TGAATCACTATAAAGGCATA+TGG + chr1_3:60721897-60721916 None:intergenic 30.0%
TAGTAATCATACCTTCATAG+TGG - chr1_3:60721988-60722007 Msa0130470:CDS 30.0%
AAAGTTGTATTTATGGACCT+TGG - chr1_3:60722123-60722142 Msa0130470:CDS 30.0%
AAAAACTTGACAATTAGCAC+AGG + chr1_3:60722158-60722177 None:intergenic 30.0%
GTTGATGTAACTTGAAAAAC+CGG + chr1_3:60722607-60722626 None:intergenic 30.0%
TAAGAAGGAGAGGAAGAAAT+GGG + chr1_3:60716881-60716900 None:intergenic 35.0%
ATAAGAAGGAGAGGAAGAAA+TGG + chr1_3:60716882-60716901 None:intergenic 35.0%
! TGATGATGAATAAGAAGGAG+AGG + chr1_3:60716891-60716910 None:intergenic 35.0%
!! ACCAAACATGCAAAAGTACT+CGG + chr1_3:60716971-60716990 None:intergenic 35.0%
!!! TGAGTAGCAGTTTTTTTTGC+CGG + chr1_3:60717345-60717364 None:intergenic 35.0%
AGTTCGATTGATGAGATGAT+TGG + chr1_3:60717605-60717624 None:intergenic 35.0%
!!! GAAGTTTTGCTGCTTTTACT+TGG - chr1_3:60718071-60718090 Msa0130470:intron 35.0%
!! ATTAAGCTTGTTGCTGTTTC+TGG - chr1_3:60718133-60718152 Msa0130470:intron 35.0%
AAGAGGAAAAACCTTGAAGA+GGG + chr1_3:60718219-60718238 None:intergenic 35.0%
TAAGAGGAAAAACCTTGAAG+AGG + chr1_3:60718220-60718239 None:intergenic 35.0%
GTACATAACACCAACAAATG+TGG - chr1_3:60718323-60718342 Msa0130470:CDS 35.0%
ATCAATGTTAGTGTCGTATC+CGG - chr1_3:60718398-60718417 Msa0130470:CDS 35.0%
CTATAAAGCACACACAAAAC+CGG + chr1_3:60718420-60718439 None:intergenic 35.0%
TGTGTGTGCTTTATAGCTTA+TGG - chr1_3:60718424-60718443 Msa0130470:CDS 35.0%
GTGTGTGCTTTATAGCTTAT+GGG - chr1_3:60718425-60718444 Msa0130470:CDS 35.0%
! TTTTGTAGCAAGTGCTATGA+AGG - chr1_3:60718454-60718473 Msa0130470:CDS 35.0%
CTCGGAACATGAAATGTATA+TGG + chr1_3:60718669-60718688 None:intergenic 35.0%
ATACATTTCATGTTCCGAGT+AGG - chr1_3:60718670-60718689 Msa0130470:intron 35.0%
TTATGTATTCAGCACCTACT+CGG + chr1_3:60718687-60718706 None:intergenic 35.0%
AGCGTGTGTATATAATCATG+AGG + chr1_3:60718811-60718830 None:intergenic 35.0%
TTGGTAGAAAAATGGACAGA+TGG - chr1_3:60718876-60718895 Msa0130470:intron 35.0%
TAGAAAAATGGACAGATGGA+TGG - chr1_3:60718880-60718899 Msa0130470:intron 35.0%
!! TTTCCTTGCATAATGGACTT+TGG - chr1_3:60718935-60718954 Msa0130470:intron 35.0%
!! TTCCTTGCATAATGGACTTT+GGG - chr1_3:60718936-60718955 Msa0130470:intron 35.0%
TTCAATACATCTAAACCGCA+CGG + chr1_3:60719113-60719132 None:intergenic 35.0%
!!! TGCTCAGTGTTTTAAGTTGA+GGG + chr1_3:60719236-60719255 None:intergenic 35.0%
!!! ATGCTCAGTGTTTTAAGTTG+AGG + chr1_3:60719237-60719256 None:intergenic 35.0%
TTCATTCCTCAAGTAAATGC+AGG + chr1_3:60719368-60719387 None:intergenic 35.0%
AGCACTAATGACGTTATGAA+GGG + chr1_3:60719462-60719481 None:intergenic 35.0%
CGAATGTAGATACAAGATTG+AGG + chr1_3:60719506-60719525 None:intergenic 35.0%
GCATACAAGGAATGCAAAAT+TGG + chr1_3:60719569-60719588 None:intergenic 35.0%
AACTTGAGTTCGAATTCCTT+GGG - chr1_3:60719690-60719709 Msa0130470:intron 35.0%
CTGATCTTACACTTGTATCA+GGG + chr1_3:60719748-60719767 None:intergenic 35.0%
TCTGATCTTACACTTGTATC+AGG + chr1_3:60719749-60719768 None:intergenic 35.0%
GTTCTGTTCATAATACCAGA+AGG - chr1_3:60720144-60720163 Msa0130470:intron 35.0%
AACATGCATAAAAGAGACAC+AGG + chr1_3:60720601-60720620 None:intergenic 35.0%
TTATAATGATTGTCTCTGCC+AGG - chr1_3:60720635-60720654 Msa0130470:intron 35.0%
ATAGGACATGATGATAGAGA+TGG + chr1_3:60721249-60721268 None:intergenic 35.0%
!!! ATGTCTTTTTGTTTTCTGCG+TGG - chr1_3:60721323-60721342 Msa0130470:intron 35.0%
GGTAAAACAAATGAAGCAAC+AGG + chr1_3:60721533-60721552 None:intergenic 35.0%
CTAATTGTTTGGTATCATGG+TGG - chr1_3:60721576-60721595 Msa0130470:CDS 35.0%
AGCATGCATGTTTGATATCA+CGG + chr1_3:60721644-60721663 None:intergenic 35.0%
! TATGTTTCCTGTACTGACAA+AGG - chr1_3:60721730-60721749 Msa0130470:CDS 35.0%
TCAACTTCAAGATCTCAAAG+CGG - chr1_3:60721949-60721968 Msa0130470:CDS 35.0%
TAATCATACCTTCATAGTGG+TGG - chr1_3:60721991-60722010 Msa0130470:CDS 35.0%
GACAATGCAAGAATTATGTC+CGG + chr1_3:60722030-60722049 None:intergenic 35.0%
CTAAGACTTCTTCAGGAATT+TGG + chr1_3:60722092-60722111 None:intergenic 35.0%
! TCCTGAAGAAGTCTTAGTTT+TGG - chr1_3:60722095-60722114 Msa0130470:CDS 35.0%
TCCAAAACTAAGACTTCTTC+AGG + chr1_3:60722099-60722118 None:intergenic 35.0%
! CCTCTGATATTTGTTTCTCT+TGG + chr1_3:60722206-60722225 None:intergenic 35.0%
CCAAGAGAAACAAATATCAG+AGG - chr1_3:60722203-60722222 Msa0130470:CDS 35.0%
! ATCATTGATGATTCTTGAGC+TGG - chr1_3:60722231-60722250 Msa0130470:CDS 35.0%
ATAGAGGAGTAAAAGGTGAA+GGG + chr1_3:60722279-60722298 None:intergenic 35.0%
TATAGAGGAGTAAAAGGTGA+AGG + chr1_3:60722280-60722299 None:intergenic 35.0%
ACATGCTATAGAGGAGTAAA+AGG + chr1_3:60722286-60722305 None:intergenic 35.0%
GAATGCTAGTGATATTACCA+CGG + chr1_3:60722515-60722534 None:intergenic 35.0%
!! AGCAAAGGCTTTAAGCTATA+TGG - chr1_3:60722811-60722830 Msa0130470:CDS 35.0%
GTAACACAGTTGTAGCAATA+CGG + chr1_3:60722851-60722870 None:intergenic 35.0%
AAGAAGGAGAGGAAGAAATG+GGG + chr1_3:60716880-60716899 None:intergenic 40.0%
! GGTGGTGATGATGAATAAGA+AGG + chr1_3:60716896-60716915 None:intergenic 40.0%
AGTTACCAGAGGGAAAAGAT+GGG + chr1_3:60716942-60716961 None:intergenic 40.0%
TAGTTACCAGAGGGAAAAGA+TGG + chr1_3:60716943-60716962 None:intergenic 40.0%
! ACCGAGTACTTTTGCATGTT+TGG - chr1_3:60716967-60716986 Msa0130470:three_prime_UTR 40.0%
TCCTCATACCACATTAACTG+CGG - chr1_3:60717173-60717192 Msa0130470:three_prime_UTR 40.0%
TGATGAGATGATTGGAGCAT+CGG + chr1_3:60717597-60717616 None:intergenic 40.0%
TCATACGAAGCGGAATTTAC+AGG + chr1_3:60717632-60717651 None:intergenic 40.0%
GGAGTTAGAATCATACGAAG+CGG + chr1_3:60717642-60717661 None:intergenic 40.0%
TCGTATGATTCTAACTCCAC+CGG - chr1_3:60717644-60717663 Msa0130470:intron 40.0%
! AAGAATGAAGTTTTCACCGG+TGG + chr1_3:60717663-60717682 None:intergenic 40.0%
AACTACGGTAGAGTTTCATG+CGG - chr1_3:60717686-60717705 Msa0130470:intron 40.0%
GCCGAATTTATCAGTATCGT+TGG + chr1_3:60717741-60717760 None:intergenic 40.0%
ACGATACTGATAAATTCGGC+CGG - chr1_3:60717741-60717760 Msa0130470:intron 40.0%
TCTGACAATTTCTTCCGGTT+CGG + chr1_3:60717795-60717814 None:intergenic 40.0%
TCCGATGAAGCTTTACCAAA+CGG - chr1_3:60717868-60717887 Msa0130470:intron 40.0%
!! GGATGCAAAGATGGACTATA+TGG - chr1_3:60717934-60717953 Msa0130470:intron 40.0%
!! CAAAGATGGACTATATGGTG+TGG - chr1_3:60717939-60717958 Msa0130470:intron 40.0%
GATTCGAGTGTGAAGAAAGA+AGG - chr1_3:60717980-60717999 Msa0130470:intron 40.0%
TGTGAAGAAAGAAGGAGAGA+GGG - chr1_3:60717988-60718007 Msa0130470:intron 40.0%
!! AAGTGCTATGAAGGCATTGA+AGG - chr1_3:60718463-60718482 Msa0130470:CDS 40.0%
AAAATGGACAGATGGATGGT+TGG - chr1_3:60718884-60718903 Msa0130470:intron 40.0%
TACCCAAAGTCCATTATGCA+AGG + chr1_3:60718941-60718960 None:intergenic 40.0%
TTCAGAAATCTTGGCAGTCA+AGG - chr1_3:60718992-60719011 Msa0130470:intron 40.0%
TTGGCAGTCAAGGCTTAAAA+GGG - chr1_3:60719002-60719021 Msa0130470:intron 40.0%
TTTACATCTTGCATACCGTG+CGG - chr1_3:60719095-60719114 Msa0130470:intron 40.0%
! CTAGAGTACCACTAAACATG+TGG + chr1_3:60719190-60719209 None:intergenic 40.0%
ATTGTAGCCACGGAAATGAA+AGG + chr1_3:60719286-60719305 None:intergenic 40.0%
GAGCACTAATGACGTTATGA+AGG + chr1_3:60719463-60719482 None:intergenic 40.0%
ATTGGAGCCAATATGCACTA+TGG + chr1_3:60719551-60719570 None:intergenic 40.0%
CAAAAGTCAGATGGCATACA+AGG + chr1_3:60719582-60719601 None:intergenic 40.0%
GAACTTGAGTTCGAATTCCT+TGG - chr1_3:60719689-60719708 Msa0130470:intron 40.0%
ACTTGAGTTCGAATTCCTTG+GGG - chr1_3:60719691-60719710 Msa0130470:intron 40.0%
GAGCACTTCATAGTTGTGTT+GGG + chr1_3:60720071-60720090 None:intergenic 40.0%
TGAGCACTTCATAGTTGTGT+TGG + chr1_3:60720072-60720091 None:intergenic 40.0%
AGAGCCGGTTAAGTGATTAT+TGG + chr1_3:60720239-60720258 None:intergenic 40.0%
TACGAAGAGAAATACGGTTG+CGG + chr1_3:60720529-60720548 None:intergenic 40.0%
TAGGTTACCATTCAATAGCC+TGG + chr1_3:60720656-60720675 None:intergenic 40.0%
GCTATTGAATGGTAACCTAC+TGG - chr1_3:60720657-60720676 Msa0130470:intron 40.0%
TTGAATGGTAACCTACTGGA+AGG - chr1_3:60720661-60720680 Msa0130470:intron 40.0%
CCAACAGAATAAAGTTGCTC+TGG + chr1_3:60720694-60720713 None:intergenic 40.0%
CCAGAGCAACTTTATTCTGT+TGG - chr1_3:60720691-60720710 Msa0130470:CDS 40.0%
GATAACTACTTTAGCCACAG+TGG - chr1_3:60720914-60720933 Msa0130470:intron 40.0%
ATTCAGTCTCTCAAGCAACA+AGG - chr1_3:60721209-60721228 Msa0130470:CDS 40.0%
TTCAGTCTCTCAAGCAACAA+GGG - chr1_3:60721210-60721229 Msa0130470:CDS 40.0%
TACTCACCCATTACTTCATG+GGG + chr1_3:60721408-60721427 None:intergenic 40.0%
GTACTCACCCATTACTTCAT+GGG + chr1_3:60721409-60721428 None:intergenic 40.0%
TGTACTCACCCATTACTTCA+TGG + chr1_3:60721410-60721429 None:intergenic 40.0%
!! CATGGTGGATTTCAGAATCA+CGG - chr1_3:60721591-60721610 Msa0130470:CDS 40.0%
TGCATGTTTGATATCACGGT+GGG + chr1_3:60721640-60721659 None:intergenic 40.0%
ATGCATGTTTGATATCACGG+TGG + chr1_3:60721641-60721660 None:intergenic 40.0%
CAACTTCAAGATCTCAAAGC+GGG - chr1_3:60721950-60721969 Msa0130470:CDS 40.0%
AAAAGGTGAAGGGAATCCTT+TGG + chr1_3:60722269-60722288 None:intergenic 40.0%
! AATGCTGCTTCATCACAATG+AGG - chr1_3:60722423-60722442 Msa0130470:CDS 40.0%
TGCGCATTTGACGATGATTT+CGG - chr1_3:60722469-60722488 Msa0130470:CDS 40.0%
ATTTCGGACCATCGTATAAG+AGG - chr1_3:60722485-60722504 Msa0130470:CDS 40.0%
TATGGCAGTTGTAGTAGCAA+AGG - chr1_3:60722796-60722815 Msa0130470:CDS 40.0%
GTTACCAGAGGGAAAAGATG+GGG + chr1_3:60716941-60716960 None:intergenic 45.0%
TCGGTAGAGTAGTTACCAGA+GGG + chr1_3:60716952-60716971 None:intergenic 45.0%
!! TTGAAGTGCCGCAGTTAATG+TGG + chr1_3:60717184-60717203 None:intergenic 45.0%
AGAGCCATGTTGTGTTGAAG+GGG + chr1_3:60717220-60717239 None:intergenic 45.0%
GAGAGCCATGTTGTGTTGAA+GGG + chr1_3:60717221-60717240 None:intergenic 45.0%
!!! GTAGCAGTTTTTTTTGCCGG+AGG + chr1_3:60717342-60717361 None:intergenic 45.0%
!! CCAGTTGAAAATGATGGTGG+AGG + chr1_3:60717468-60717487 None:intergenic 45.0%
! CCTCCACCATCATTTTCAAC+TGG - chr1_3:60717465-60717484 Msa0130470:CDS 45.0%
ACGCCAGTTGAAAATGATGG+TGG + chr1_3:60717471-60717490 None:intergenic 45.0%
GGAACGCCAGTTGAAAATGA+TGG + chr1_3:60717474-60717493 None:intergenic 45.0%
! ATCAGTATCGTTGGTGAAGC+CGG + chr1_3:60717732-60717751 None:intergenic 45.0%
!! CAATTTCTTCCGGTTCGGTT+CGG + chr1_3:60717790-60717809 None:intergenic 45.0%
GCCGTTTGGTAAAGCTTCAT+CGG + chr1_3:60717872-60717891 None:intergenic 45.0%
GATGAAGCTTTACCAAACGG+CGG - chr1_3:60717871-60717890 Msa0130470:intron 45.0%
ATTGAGCGTGGATGCAAAGA+TGG - chr1_3:60717925-60717944 Msa0130470:intron 45.0%
GTGTGAAGAAAGAAGGAGAG+AGG - chr1_3:60717987-60718006 Msa0130470:intron 45.0%
!! TCTGGTGCTCCTTTGATTTG+TGG - chr1_3:60718151-60718170 Msa0130470:intron 45.0%
AAAACCTTGAAGAGGGTGAG+TGG + chr1_3:60718212-60718231 None:intergenic 45.0%
! AAGGAATCACTTCGAGTTCC+AGG - chr1_3:60718482-60718501 Msa0130470:CDS 45.0%
! ACTTCGAGTTCCAGGTAGAA+TGG - chr1_3:60718490-60718509 Msa0130470:CDS 45.0%
! CTTCGAGTTCCAGGTAGAAT+GGG - chr1_3:60718491-60718510 Msa0130470:CDS 45.0%
ATCCTTGTGCTCCTACAACT+TGG - chr1_3:60718525-60718544 Msa0130470:intron 45.0%
TCCTTGTGCTCCTACAACTT+GGG - chr1_3:60718526-60718545 Msa0130470:intron 45.0%
TCCTACAACTTGGGATGCTT+GGG - chr1_3:60718535-60718554 Msa0130470:intron 45.0%
CCTTACACTTGACTAAAGGC+AGG + chr1_3:60718835-60718854 None:intergenic 45.0%
CCTGCCTTTAGTCAAGTGTA+AGG - chr1_3:60718832-60718851 Msa0130470:intron 45.0%
CTTGGCAGTCAAGGCTTAAA+AGG - chr1_3:60719001-60719020 Msa0130470:intron 45.0%
GGCAGCTGATCATACTTACA+GGG + chr1_3:60719068-60719087 None:intergenic 45.0%
AGGCAGCTGATCATACTTAC+AGG + chr1_3:60719069-60719088 None:intergenic 45.0%
CTTTGGTCCTTTCATTTCCG+TGG - chr1_3:60719276-60719295 Msa0130470:intron 45.0%
ACCTCACCTGCATTTACTTG+AGG - chr1_3:60719359-60719378 Msa0130470:intron 45.0%
TCCTCAAGTAAATGCAGGTG+AGG + chr1_3:60719363-60719382 None:intergenic 45.0%
AGAACACTCCAGCAATTGCA+AGG - chr1_3:60719389-60719408 Msa0130470:intron 45.0%
TGCTGCTCCATAGTGCATAT+TGG - chr1_3:60719541-60719560 Msa0130470:intron 45.0%
TGCTGCACACAAAAGTCAGA+TGG + chr1_3:60719591-60719610 None:intergenic 45.0%
CTTGAGTTCGAATTCCTTGG+GGG - chr1_3:60719692-60719711 Msa0130470:intron 45.0%
TTGAGTTCGAATTCCTTGGG+GGG - chr1_3:60719693-60719712 Msa0130470:intron 45.0%
GGTGAAATACCATCAGGACT+GGG - chr1_3:60719714-60719733 Msa0130470:intron 45.0%
! GATTTTTGACCCAGTCCTGA+TGG + chr1_3:60719726-60719745 None:intergenic 45.0%
CAAACTGTCAGGTATAGAGC+CGG + chr1_3:60720254-60720273 None:intergenic 45.0%
GTTGAAGATGCCAAACTGTC+AGG + chr1_3:60720265-60720284 None:intergenic 45.0%
! TGCGGTAAAAGAAAAGCGTG+AGG + chr1_3:60720388-60720407 None:intergenic 45.0%
GCATAAAAGAGACACAGGTG+AGG + chr1_3:60720596-60720615 None:intergenic 45.0%
CTTTATTCTGTTGGCGTGCA+CGG - chr1_3:60720700-60720719 Msa0130470:CDS 45.0%
AAGAAGCAGCATAACCACTG+TGG + chr1_3:60720931-60720950 None:intergenic 45.0%
GACAACTTTAGCCAGAGCAT+TGG + chr1_3:60721032-60721051 None:intergenic 45.0%
TCAAGCAACAAGGGTTTGTG+TGG - chr1_3:60721219-60721238 Msa0130470:CDS 45.0%
!!! TGTCCTATGTTTTGGGAGCA+TGG - chr1_3:60721261-60721280 Msa0130470:CDS 45.0%
TGGTCTACCCCATGAAGTAA+TGG - chr1_3:60721398-60721417 Msa0130470:intron 45.0%
GGTCTACCCCATGAAGTAAT+GGG - chr1_3:60721399-60721418 Msa0130470:intron 45.0%
! TCTGTTGCTGACTATGCTGT+TGG - chr1_3:60721507-60721526 Msa0130470:intron 45.0%
TGGGTTTGTCAAAATCACGG+TGG + chr1_3:60721621-60721640 None:intergenic 45.0%
! CGGTGGGTTTGTCAAAATCA+CGG + chr1_3:60721624-60721643 None:intergenic 45.0%
TTCAAGATCTCAAAGCGGGT+TGG - chr1_3:60721954-60721973 Msa0130470:CDS 45.0%
TGTGCAAACCACCACTATGA+AGG + chr1_3:60722002-60722021 None:intergenic 45.0%
AGCACAGGCTTCAATATCCA+AGG + chr1_3:60722143-60722162 None:intergenic 45.0%
CACTAAACTCGCAGCTGAAA+TGG + chr1_3:60722583-60722602 None:intergenic 45.0%
AAAAGATGGGGTTGGAGTGG+AGG + chr1_3:60716929-60716948 None:intergenic 50.0%
CTCGGTAGAGTAGTTACCAG+AGG + chr1_3:60716953-60716972 None:intergenic 50.0%
GCCGCAGTTAATGTGGTATG+AGG + chr1_3:60717177-60717196 None:intergenic 50.0%
CAGACCCCTTCAACACAACA+TGG - chr1_3:60717213-60717232 Msa0130470:three_prime_UTR 50.0%
GGAGAGCCATGTTGTGTTGA+AGG + chr1_3:60717222-60717241 None:intergenic 50.0%
!!! AAGCGGAGGGTTTTTTCCGA+GGG + chr1_3:60717305-60717324 None:intergenic 50.0%
!!! GTTTTTTTTGCCGGAGGAGG+AGG + chr1_3:60717336-60717355 None:intergenic 50.0%
!!! GCAGTTTTTTTTGCCGGAGG+AGG + chr1_3:60717339-60717358 None:intergenic 50.0%
TAGCGAGAAGAGGGAAGTGA+GGG + chr1_3:60717371-60717390 None:intergenic 50.0%
GTAGTTGTCGTAGACGGTGA+AGG + chr1_3:60717405-60717424 None:intergenic 50.0%
TGCGTCGTAGTTGTCGTAGA+CGG + chr1_3:60717411-60717430 None:intergenic 50.0%
GTAGAAGCAAAGATCAGCGG+CGG + chr1_3:60717564-60717583 None:intergenic 50.0%
GCCGCTGATCTTTGCTTCTA+CGG - chr1_3:60717563-60717582 Msa0130470:intron 50.0%
GCCGTAGAAGCAAAGATCAG+CGG + chr1_3:60717567-60717586 None:intergenic 50.0%
CTGATAAATTCGGCCGGTCA+TGG - chr1_3:60717747-60717766 Msa0130470:intron 50.0%
!! TCGGTTCGGAATGCTTCATC+CGG + chr1_3:60717776-60717795 None:intergenic 50.0%
! TGAAGCATTCCGAACCGAAC+CGG - chr1_3:60717778-60717797 Msa0130470:intron 50.0%
TCAACGGAGAACACCGTGAA+TGG - chr1_3:60717821-60717840 Msa0130470:intron 50.0%
GTTGGAGTACGAATTGAGCG+TGG - chr1_3:60717913-60717932 Msa0130470:intron 50.0%
TATGGTGTGGCTGCATTTCG+CGG - chr1_3:60717952-60717971 Msa0130470:intron 50.0%
TGTATGGTGTCTGACACGTG+TGG - chr1_3:60718285-60718304 Msa0130470:intron 50.0%
GTATGGTGTCTGACACGTGT+GGG - chr1_3:60718286-60718305 Msa0130470:intron 50.0%
GAGTTCCAGGTAGAATGGGA+TGG - chr1_3:60718495-60718514 Msa0130470:CDS 50.0%
CCATTCCATCCCATTCTACC+TGG + chr1_3:60718503-60718522 None:intergenic 50.0%
CCAGGTAGAATGGGATGGAA+TGG - chr1_3:60718500-60718519 Msa0130470:CDS 50.0%
! TCCCAAGTTGTAGGAGCACA+AGG + chr1_3:60718530-60718549 None:intergenic 50.0%
CTCCTACAACTTGGGATGCT+TGG - chr1_3:60718534-60718553 Msa0130470:intron 50.0%
TCCCAAGCATCCCAAGTTGT+AGG + chr1_3:60718539-60718558 None:intergenic 50.0%
TACAACTTGGGATGCTTGGG+AGG - chr1_3:60718538-60718557 Msa0130470:intron 50.0%
ACAACTTGGGATGCTTGGGA+GGG - chr1_3:60718539-60718558 Msa0130470:intron 50.0%
TGATGGTATTTCACCCCCCA+AGG + chr1_3:60719709-60719728 None:intergenic 50.0%
TTGGGGGGTGAAATACCATC+AGG - chr1_3:60719708-60719727 Msa0130470:intron 50.0%
GGGTGAAATACCATCAGGAC+TGG - chr1_3:60719713-60719732 Msa0130470:intron 50.0%
CGGCTCTATACCTGACAGTT+TGG - chr1_3:60720252-60720271 Msa0130470:intron 50.0%
GTCTCTGCCAGGCTATTGAA+TGG - chr1_3:60720646-60720665 Msa0130470:intron 50.0%
!! CCAGAGCATTGGTGCAAAAC+CGG + chr1_3:60721021-60721040 None:intergenic 50.0%
!!! CCTATGTTTTGGGAGCATGG+CGG - chr1_3:60721264-60721283 Msa0130470:intron 50.0%
!! AGCATGGCGGATTATCGACT+CGG - chr1_3:60721277-60721296 Msa0130470:intron 50.0%
GGCAGTTCCTTTGTCAGTAC+AGG + chr1_3:60721740-60721759 None:intergenic 50.0%
! TGGTGGTTTGCACATAGCTC+CGG - chr1_3:60722008-60722027 Msa0130470:CDS 50.0%
AGCAGCATTGCATTGCGTCA+AGG + chr1_3:60722412-60722431 None:intergenic 50.0%
ACGGCATGCCTCTTATACGA+TGG + chr1_3:60722496-60722515 None:intergenic 50.0%
! ATCGTATAAGAGGCATGCCG+TGG - chr1_3:60722495-60722514 Msa0130470:CDS 50.0%
TCAGCTGCGAGTTTAGTGTC+CGG - chr1_3:60722585-60722604 Msa0130470:intron 50.0%
GGGAAAAGATGGGGTTGGAG+TGG + chr1_3:60716932-60716951 None:intergenic 55.0%
CCAGAGGGAAAAGATGGGGT+TGG + chr1_3:60716937-60716956 None:intergenic 55.0%
! CCAACCCCATCTTTTCCCTC+TGG - chr1_3:60716934-60716953 Msa0130470:three_prime_UTR 55.0%
CTCTCCGACCGTTACTACAC+CGG - chr1_3:60717236-60717255 Msa0130470:three_prime_UTR 55.0%
TTTCCGAGGGGAGGTTGAAC+CGG + chr1_3:60717292-60717311 None:intergenic 55.0%
!!! AGCGGAGGGTTTTTTCCGAG+GGG + chr1_3:60717304-60717323 None:intergenic 55.0%
!!! GAAGCGGAGGGTTTTTTCCG+AGG + chr1_3:60717306-60717325 None:intergenic 55.0%
! TTTTTGCCGGAGGAGGAGGA+GGG + chr1_3:60717332-60717351 None:intergenic 55.0%
!!! TTTTTTGCCGGAGGAGGAGG+AGG + chr1_3:60717333-60717352 None:intergenic 55.0%
GTAGCGAGAAGAGGGAAGTG+AGG + chr1_3:60717372-60717391 None:intergenic 55.0%
TGTCGTAGACGGTGAAGGTG+CGG + chr1_3:60717400-60717419 None:intergenic 55.0%
! TTTTCAACTGGCGTTCCCCC+TGG - chr1_3:60717477-60717496 Msa0130470:CDS 55.0%
AAGCAAAGATCAGCGGCGGA+GGG + chr1_3:60717560-60717579 None:intergenic 55.0%
GGTAGAGTTTCATGCGGCTC+CGG - chr1_3:60717692-60717711 Msa0130470:intron 55.0%
ATGCGGCTCCGGTGATCATT+GGG - chr1_3:60717703-60717722 Msa0130470:intron 55.0%
TTACCAAACGGCGGTGACGA+CGG - chr1_3:60717880-60717899 Msa0130470:intron 55.0%
CCTTGAAGAGGGTGAGTGGT+AGG + chr1_3:60718208-60718227 None:intergenic 55.0%
CCTACCACTCACCCTCTTCA+AGG - chr1_3:60718205-60718224 Msa0130470:intron 55.0%
AGTGAGACAACGCCAGATCC+AGG + chr1_3:60720505-60720524 None:intergenic 55.0%
GTGAGGCTGCACTAAAGGTC+GGG + chr1_3:60720579-60720598 None:intergenic 55.0%
GGTGAGGCTGCACTAAAGGT+CGG + chr1_3:60720580-60720599 None:intergenic 55.0%
CACAGGTGAGGCTGCACTAA+AGG + chr1_3:60720584-60720603 None:intergenic 55.0%
TATTCTGTTGGCGTGCACGG+TGG - chr1_3:60720703-60720722 Msa0130470:CDS 55.0%
! CCGGTTTTGCACCAATGCTC+TGG - chr1_3:60721018-60721037 Msa0130470:intron 55.0%
CCGCCATGCTCCCAAAACAT+AGG + chr1_3:60721267-60721286 None:intergenic 55.0%
!! GCATGGCGGATTATCGACTC+GGG - chr1_3:60721278-60721297 Msa0130470:intron 55.0%
!! CATGGCGGATTATCGACTCG+GGG - chr1_3:60721279-60721298 Msa0130470:intron 55.0%
TTTCTGCGTGGTACTGCTGC+TGG - chr1_3:60721335-60721354 Msa0130470:intron 55.0%
CTGGAGAGTCAACACGCCAA+AGG - chr1_3:60722250-60722269 Msa0130470:CDS 55.0%
CATTGCGTCAAGGTCGAGCA+GGG + chr1_3:60722402-60722421 None:intergenic 55.0%
! AGTGGAGGTGGAGATGGTGG+TGG + chr1_3:60716914-60716933 None:intergenic 60.0%
TGGAGTGGAGGTGGAGATGG+TGG + chr1_3:60716917-60716936 None:intergenic 60.0%
GGTTGGAGTGGAGGTGGAGA+TGG + chr1_3:60716920-60716939 None:intergenic 60.0%
AGATGGGGTTGGAGTGGAGG+TGG + chr1_3:60716926-60716945 None:intergenic 60.0%
TCCGACCGTTACTACACCGG+CGG - chr1_3:60717239-60717258 Msa0130470:three_prime_UTR 60.0%
ACTCCGGTTCAACCTCCCCT+CGG - chr1_3:60717286-60717305 Msa0130470:three_prime_UTR 60.0%
!!! GGAGGGTTTTTTCCGAGGGG+AGG + chr1_3:60717301-60717320 None:intergenic 60.0%
AGGAGGAGGAGGGGAAGAAG+CGG + chr1_3:60717322-60717341 None:intergenic 60.0%
TTCTTCCCCTCCTCCTCCTC+CGG - chr1_3:60717323-60717342 Msa0130470:three_prime_UTR 60.0%
! TTTTGCCGGAGGAGGAGGAG+GGG + chr1_3:60717331-60717350 None:intergenic 60.0%
CGGAGGAGGTAGCGAGAAGA+GGG + chr1_3:60717380-60717399 None:intergenic 60.0%
AGTGCGACGTCGAAGGAAGG+AGG + chr1_3:60717443-60717462 None:intergenic 60.0%
! GAGAGTGCGACGTCGAAGGA+AGG + chr1_3:60717446-60717465 None:intergenic 60.0%
! AGCATAAGCACCGTCGCGTG+CGG + chr1_3:60717513-60717532 None:intergenic 60.0%
GAAGCAAAGATCAGCGGCGG+AGG + chr1_3:60717561-60717580 None:intergenic 60.0%
CATGCGGCTCCGGTGATCAT+TGG - chr1_3:60717702-60717721 Msa0130470:intron 60.0%
TGCGGCTCCGGTGATCATTG+GGG - chr1_3:60717704-60717723 Msa0130470:intron 60.0%
CTTCATCCGGCTGCCATGAC+CGG + chr1_3:60717763-60717782 None:intergenic 60.0%
CTGGCACTCGTCCTTCCAGT+AGG + chr1_3:60720675-60720694 None:intergenic 60.0%
GCATTGCGTCAAGGTCGAGC+AGG + chr1_3:60722403-60722422 None:intergenic 60.0%
GCCGCCGGTGTAGTAACGGT+CGG + chr1_3:60717243-60717262 None:intergenic 65.0%
TGGCGCCGCCGGTGTAGTAA+CGG + chr1_3:60717247-60717266 None:intergenic 65.0%
GAACCGGAGTGGCTCCGAGA+CGG + chr1_3:60717276-60717295 None:intergenic 65.0%
GAGGGGAGGTTGAACCGGAG+TGG + chr1_3:60717287-60717306 None:intergenic 65.0%
GGAGGAGGGGAAGAAGCGGA+GGG + chr1_3:60717318-60717337 None:intergenic 65.0%
AGGAGGAGGGGAAGAAGCGG+AGG + chr1_3:60717319-60717338 None:intergenic 65.0%
GCGGAGGAGGTAGCGAGAAG+AGG + chr1_3:60717381-60717400 None:intergenic 65.0%
! AGACGGTGAAGGTGCGGAGG+AGG + chr1_3:60717394-60717413 None:intergenic 65.0%
! CGTAGACGGTGAAGGTGCGG+AGG + chr1_3:60717397-60717416 None:intergenic 65.0%
! GGAGGAGAGTGCGACGTCGA+AGG + chr1_3:60717450-60717469 None:intergenic 65.0%
! TGCGGTGGATTCAGGCCAGG+GGG + chr1_3:60717495-60717514 None:intergenic 65.0%
! GTGCGGTGGATTCAGGCCAG+GGG + chr1_3:60717496-60717515 None:intergenic 65.0%
! CGTGCGGTGGATTCAGGCCA+GGG + chr1_3:60717497-60717516 None:intergenic 65.0%
CCTGAATCCACCGCACGCGA+CGG - chr1_3:60717500-60717519 Msa0130470:CDS 65.0%
! ATAAGCACCGTCGCGTGCGG+TGG + chr1_3:60717510-60717529 None:intergenic 65.0%
TCCGGTGATCATTGGGGCGC+CGG - chr1_3:60717710-60717729 Msa0130470:intron 65.0%
ATTCGGCCGGTCATGGCAGC+CGG - chr1_3:60717754-60717773 Msa0130470:intron 65.0%
GACGACGGAGGAGGAGACGT+TGG - chr1_3:60717895-60717914 Msa0130470:intron 65.0%
! TGGCTCCGAGACGGTGGTGG+TGG + chr1_3:60717267-60717286 None:intergenic 70.0%
GAGTGGCTCCGAGACGGTGG+TGG + chr1_3:60717270-60717289 None:intergenic 70.0%
CCACCGTCTCGGAGCCACTC+CGG - chr1_3:60717270-60717289 Msa0130470:three_prime_UTR 70.0%
! GCGTGCGGTGGATTCAGGCC+AGG + chr1_3:60717498-60717517 None:intergenic 70.0%
! CCGTCGCGTGCGGTGGATTC+AGG + chr1_3:60717503-60717522 None:intergenic 70.0%
GCCGGCGCCCCAATGATCAC+CGG + chr1_3:60717714-60717733 None:intergenic 70.0%
CCTCCGTCGTCACCGCCGTT+TGG + chr1_3:60717886-60717905 None:intergenic 70.0%
CCAAACGGCGGTGACGACGG+AGG - chr1_3:60717883-60717902 Msa0130470:intron 70.0%
AACGGCGGTGACGACGGAGG+AGG - chr1_3:60717886-60717905 Msa0130470:intron 70.0%
CGGCGCCACCACCACCGTCT+CGG - chr1_3:60717259-60717278 Msa0130470:three_prime_UTR 75.0%
CCGGAGTGGCTCCGAGACGG+TGG + chr1_3:60717273-60717292 None:intergenic 75.0%
!!! GACGGTGGTGGTGGCGCCGC+CGG + chr1_3:60717258-60717277 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_3 gene 60716865 60722877 60716865 ID=Msa0130470;Name=Msa0130470
chr1_3 mRNA 60716865 60722877 60716865 ID=Msa0130470-mRNA-1;Parent=Msa0130470;Name=Msa0130470-mRNA-1;_AED=0.04;_eAED=0.04;_QI=0|0.87|0.88|1|1|1|9|577|665
chr1_3 exon 60716865 60717548 60716865 ID=Msa0130470-mRNA-1:exon:20045;Parent=Msa0130470-mRNA-1
chr1_3 exon 60718322 60718527 60718322 ID=Msa0130470-mRNA-1:exon:20044;Parent=Msa0130470-mRNA-1
chr1_3 exon 60719008 60719085 60719008 ID=Msa0130470-mRNA-1:exon:20043;Parent=Msa0130470-mRNA-1
chr1_3 exon 60719446 60719514 60719446 ID=Msa0130470-mRNA-1:exon:20042;Parent=Msa0130470-mRNA-1
chr1_3 exon 60719985 60720053 60719985 ID=Msa0130470-mRNA-1:exon:20041;Parent=Msa0130470-mRNA-1
chr1_3 exon 60720674 60720745 60720674 ID=Msa0130470-mRNA-1:exon:20040;Parent=Msa0130470-mRNA-1
chr1_3 exon 60721130 60721280 60721130 ID=Msa0130470-mRNA-1:exon:20039;Parent=Msa0130470-mRNA-1
chr1_3 exon 60721516 60722577 60721516 ID=Msa0130470-mRNA-1:exon:20038;Parent=Msa0130470-mRNA-1
chr1_3 exon 60722694 60722877 60722694 ID=Msa0130470-mRNA-1:exon:20037;Parent=Msa0130470-mRNA-1
chr1_3 CDS 60722694 60722877 60722694 ID=Msa0130470-mRNA-1:cds;Parent=Msa0130470-mRNA-1
chr1_3 CDS 60721516 60722577 60721516 ID=Msa0130470-mRNA-1:cds;Parent=Msa0130470-mRNA-1
chr1_3 CDS 60721130 60721280 60721130 ID=Msa0130470-mRNA-1:cds;Parent=Msa0130470-mRNA-1
chr1_3 CDS 60720674 60720745 60720674 ID=Msa0130470-mRNA-1:cds;Parent=Msa0130470-mRNA-1
chr1_3 CDS 60719985 60720053 60719985 ID=Msa0130470-mRNA-1:cds;Parent=Msa0130470-mRNA-1
chr1_3 CDS 60719446 60719514 60719446 ID=Msa0130470-mRNA-1:cds;Parent=Msa0130470-mRNA-1
chr1_3 CDS 60719008 60719085 60719008 ID=Msa0130470-mRNA-1:cds;Parent=Msa0130470-mRNA-1
chr1_3 CDS 60718322 60718527 60718322 ID=Msa0130470-mRNA-1:cds;Parent=Msa0130470-mRNA-1
chr1_3 CDS 60717442 60717548 60717442 ID=Msa0130470-mRNA-1:cds;Parent=Msa0130470-mRNA-1
chr1_3 three_prime_UTR 60716865 60717441 60716865 ID=Msa0130470-mRNA-1:three_prime_utr;Parent=Msa0130470-mRNA-1
Gene Sequence

>Msa0130470

ATGATTCAACTACCCCATTTCTTCCTCTCCTTCTTATTCATCATCACCACCACCATCTCCACCTCCACTCCAACCCCATCTTTTCCCTCTGGTAACTACTCTACCGAGTACTTTTGCATGTTTGGTATCAGAGTGAGTTTGTCGAAATATACTGAGTCATACGATTTTGCAAAAGATACAAACCGTAACTTGTCCTCATACCACATTAACTGCGGCACTTCAACAAACATAACAGACCCCTTCAACACAACATGGCTCTCCGACCGTTACTACACCGGCGGCGCCACCACCACCGTCTCGGAGCCACTCCGGTTCAACCTCCCCTCGGAAAAAACCCTCCGCTTCTTCCCCTCCTCCTCCTCCGGCAAAAAAAACTGCTACTCATTTCCCTCACTTCCCTCTTCTCGCTACCTCCTCCGCACCTTCACCGTCTACGACAACTACGACGCAAAGTCTCGTCCTCCTTCCTTCGACGTCGCACTCTCCTCCACCATCATTTTCAACTGGCGTTCCCCCTGGCCTGAATCCACCGCACGCGACGGTGCTTATGCTGATCTTTTCGCTTTTCTTCATACTCCCTCCGCCGCTGATCTTTGCTTCTACGGCTTCGCTACCGATGCTCCAATCATCTCATCAATCGAACTCATTCCTGTAAATTCCGCTTCGTATGATTCTAACTCCACCGGTGAAAACTTCATTCTTGTTAACTACGGTAGAGTTTCATGCGGCTCCGGTGATCATTGGGGCGCCGGCTTCACCAACGATACTGATAAATTCGGCCGGTCATGGCAGCCGGATGAAGCATTCCGAACCGAACCGGAAGAAATTGTCAGAGTTTTATCAACGGAGAACACCGTGAATGGTACTGAAAAAGAACCGAATTATTTTCCGATGAAGCTTTACCAAACGGCGGTGACGACGGAGGAGGAGACGTTGGAGTACGAATTGAGCGTGGATGCAAAGATGGACTATATGGTGTGGCTGCATTTCGCGGAGATTGATTCGAGTGTGAAGAAAGAAGGAGAGAGGGTTTTTGATGTGTTTATCAATGGAAATAATGTAACAAGAGTTGATATTTACAAAGAAGTGGGAAGTTTTGCTGCTTTTACTTGGCATTATACTGTGAAAAATTTGAGTAGTAATGTTTTGGGGATTAAGCTTGTTGCTGTTTCTGGTGCTCCTTTGATTTGTGGTATTGAGAATTATGCATTGGTGCTTAATGAACCTACCACTCACCCTCTTCAAGCAAGTGCTATGAAGGCATTGAAGGAATCACTTCGAGTTCCAGGTAGAATGGGATGGAATGGTGATCCTTGTGCTCCTACAACTTGGGATGCTTGGGAGGGTGTTAGCTGCCGTATGAGTGATGATAAAACTGCTCTCCTCATTACTGAAATAAATCTTGGCAGTCAAGGCTTAAAAGGGAACATAAGTGATCAGATTAGTCTTTTGTCAGATTTGGTAACCCTGAACTTGAGTTCGAATTCCTTGGGGGGTGAAATACCATCAGGACTGGGTCAAAAATCCCTGATACAAGTGGATTTATCCAATAATCACTTAACCGGCTCTATACCTGACAGTTTGGCATCTTCAACATTGCAGCTTGTGCTATTGAATGGTAACCTACTGGAAGGACGAGTGCCAGAGCAACTTTATTCTGTTGGCGTGCACGGTGGAGCTATTGATCTCTCAAGCAACAAGGGTTTGTGTGGTGTACCATCTCTATCATCATGTCCTATGTTTTGGGAGCATGGCGGATTATCGACTCGGGGTAAAATTGCAATAGTCTTTTCATGTCTTTTTGTTTTCTGCGTGGTACTGCTGCTGGTATATATCTACATCAGAAAGAAAAGGAACGATTATGACTTTGGTCTACCCCATGAAGTAATGGCTCTAGCTGCCAAGAGAAACAAATATCAGAGGCAGAAATCATTGATGATTCTTGAGCTGGAGAGTCAACACGCCAAAGGATTCCCTTCACCTTTTACTCCTCTATAG
Protein sequence

>Msa0130470

MIQLPHFFLSFLFIITTTISTSTPTPSFPSGNYSTEYFCMFGIRVSLSKYTESYDFAKDTNRNLSSYHINCGTSTNITDPFNTTWLSDRYYTGGATTTVSEPLRFNLPSEKTLRFFPSSSSGKKNCYSFPSLPSSRYLLRTFTVYDNYDAKSRPPSFDVALSSTIIFNWRSPWPESTARDGAYADLFAFLHTPSAADLCFYGFATDAPIISSIELIPVNSASYDSNSTGENFILVNYGRVSCGSGDHWGAGFTNDTDKFGRSWQPDEAFRTEPEEIVRVLSTENTVNGTEKEPNYFPMKLYQTAVTTEEETLEYELSVDAKMDYMVWLHFAEIDSSVKKEGERVFDVFINGNNVTRVDIYKEVGSFAAFTWHYTVKNLSSNVLGIKLVAVSGAPLICGIENYALVLNEPTTHPLQASAMKALKESLRVPGRMGWNGDPCAPTTWDAWEGVSCRMSDDKTALLITEINLGSQGLKGNISDQISLLSDLVTLNLSSNSLGGEIPSGLGQKSLIQVDLSNNHLTGSIPDSLASSTLQLVLLNGNLLEGRVPEQLYSVGVHGGAIDLSSNKGLCGVPSLSSCPMFWEHGGLSTRGKIAIVFSCLFVFCVVLLLVYIYIRKKRNDYDFGLPHEVMALAAKRNKYQRQKSLMILELESQHAKGFPSPFTPL*