Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132170 | KEH43638.1 | 97.101 | 138 | 2 | 1 | 19 | 156 | 3 | 138 | 4.40e-89 | 278 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132170 | sp|Q8H0Z6|IP5P3_ARATH | 45.342 | 161 | 62 | 5 | 17 | 156 | 9 | 164 | 4.66e-32 | 123 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132170 | A0A072VQD3 | 97.101 | 138 | 2 | 1 | 19 | 156 | 3 | 138 | 2.10e-89 | 278 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0021310 | Msa0132170 | 0.893669 | 5.067815e-75 | -8.615850e-47 |
| Msa0127780 | Msa0132170 | 0.802943 | 4.412989e-49 | -8.615850e-47 |
| Msa0132170 | Msa0175110 | 0.866510 | 2.704830e-65 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132170 | MtrunA17_Chr1g0201271 | 97.101 | 138 | 2 | 1 | 19 | 156 | 3 | 138 | 8.32e-92 | 279 |
| Msa0132170 | MtrunA17_Chr6g0466801 | 64.444 | 135 | 47 | 1 | 22 | 156 | 1 | 134 | 7.85e-44 | 152 |
| Msa0132170 | MtrunA17_Chr5g0400311 | 38.889 | 144 | 67 | 4 | 27 | 156 | 6 | 142 | 4.18e-23 | 94.4 |
| Msa0132170 | MtrunA17_Chr4g0054951 | 38.806 | 134 | 59 | 2 | 23 | 156 | 2 | 112 | 1.22e-22 | 93.2 |
| Msa0132170 | MtrunA17_Chr4g0054941 | 37.405 | 131 | 58 | 2 | 27 | 156 | 3 | 110 | 6.93e-21 | 88.2 |
| Msa0132170 | MtrunA17_Chr7g0260081 | 34.146 | 123 | 73 | 2 | 34 | 156 | 14 | 128 | 2.61e-13 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0132170 | AT1G71710.2 | 46.154 | 156 | 62 | 4 | 22 | 156 | 1 | 155 | 4.41e-33 | 123 |
| Msa0132170 | AT1G71710.1 | 45.342 | 161 | 62 | 5 | 17 | 156 | 9 | 164 | 4.73e-33 | 123 |
| Msa0132170 | AT1G34120.3 | 42.857 | 133 | 63 | 3 | 25 | 156 | 21 | 141 | 2.17e-21 | 90.1 |
| Msa0132170 | AT1G34120.2 | 42.857 | 133 | 63 | 3 | 25 | 156 | 21 | 141 | 2.24e-21 | 89.7 |
| Msa0132170 | AT1G34120.4 | 43.609 | 133 | 58 | 4 | 25 | 156 | 21 | 137 | 2.85e-21 | 89.4 |
| Msa0132170 | AT1G34120.1 | 43.609 | 133 | 58 | 4 | 25 | 156 | 21 | 137 | 3.62e-21 | 89.4 |
| Msa0132170 | AT4G18010.1 | 37.324 | 142 | 77 | 3 | 27 | 156 | 6 | 147 | 9.12e-21 | 88.2 |
| Msa0132170 | AT4G18010.2 | 37.589 | 141 | 76 | 3 | 28 | 156 | 7 | 147 | 1.04e-20 | 87.8 |
| Msa0132170 | AT1G05470.2 | 28.244 | 131 | 85 | 3 | 27 | 156 | 6 | 128 | 2.81e-11 | 60.8 |
| Msa0132170 | AT1G05470.1 | 28.244 | 131 | 85 | 3 | 27 | 156 | 6 | 128 | 2.81e-11 | 60.8 |
Find 54 sgRNAs with CRISPR-Local
Find 507 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTCTTTGTTTATAGAATTTA+TGG | 0.063950 | 1_3:-63151766 | Msa0132170:intron |
| TCATTGTCTGAATCAGTTTC+AGG | 0.208520 | 1_3:+63151644 | None:intergenic |
| GCAAATGGCTTAACATTAAA+AGG | 0.260784 | 1_3:-63151727 | Msa0132170:CDS |
| ACTCTACATGTAGTATGAAT+TGG | 0.297647 | 1_3:-63160032 | Msa0132170:five_prime_UTR |
| GGGGAAGCCGGTCACGGATT+AGG | 0.306749 | 1_3:-63151353 | Msa0132170:CDS |
| TATTAAAAGTGATTTCAAAA+TGG | 0.313778 | 1_3:+63150669 | None:intergenic |
| CAGAATTTCTCCCAGGCTTA+AGG | 0.327355 | 1_3:-63150997 | Msa0132170:CDS |
| TGCATATACACTCAAATATA+AGG | 0.328378 | 1_3:-63150692 | Msa0132170:three_prime_UTR |
| GGGAAGCCGGTCACGGATTA+GGG | 0.338322 | 1_3:-63151352 | Msa0132170:CDS |
| AAGATATGTAGTGGATTAGT+AGG | 0.370085 | 1_3:+63159966 | None:intergenic |
| GAGTACCTGTTGTTGCTTGT+TGG | 0.389738 | 1_3:+63152017 | None:intergenic |
| GAGTACCTGTTGTTGCTTGT+TGG | 0.389738 | 1_3:+63152157 | None:intergenic |
| CACAGCCAACAAGCAACAAC+AGG | 0.389941 | 1_3:-63152022 | Msa0132170:intron |
| CACAGCCAACAAGCAACAAC+AGG | 0.389941 | 1_3:-63152162 | Msa0132170:intron |
| CAACAATGGTCATGCGCAAA+TGG | 0.392807 | 1_3:-63151742 | Msa0132170:CDS |
| CCTGCTGATATCTATGTCCT+TGG | 0.397019 | 1_3:-63150744 | Msa0132170:CDS |
| ATGACTTTGATATTGATGAT+TGG | 0.413325 | 1_3:-63150782 | Msa0132170:CDS |
| CTGACGAAGGAACATATATC+TGG | 0.435370 | 1_3:-63159893 | Msa0132170:intron |
| CTCTACATGTAGTATGAATT+GGG | 0.435854 | 1_3:-63160031 | Msa0132170:five_prime_UTR |
| TCTTTGTTTATAGAATTTAT+GGG | 0.438492 | 1_3:-63151765 | Msa0132170:intron |
| TTCTTCAATCCCTTTCCTCA+TGG | 0.443984 | 1_3:-63160067 | Msa0132170:five_prime_UTR |
| TCATCAATATCAAAGTCATT+AGG | 0.451910 | 1_3:+63150786 | None:intergenic |
| TTTCTATTAGAGTATGTGTT+GGG | 0.452675 | 1_3:-63150836 | Msa0132170:intron |
| TATAAATAGCCATGAGGAAA+GGG | 0.464206 | 1_3:+63160058 | None:intergenic |
| GATTAGTAGGTATACTGATC+AGG | 0.468889 | 1_3:+63159979 | None:intergenic |
| GGCAAAAGTCATTGACTGTA+AGG | 0.470476 | 1_3:-63150973 | Msa0132170:CDS |
| CTGCTGATATCTATGTCCTT+GGG | 0.499146 | 1_3:-63150743 | Msa0132170:CDS |
| CAGGAGAGAGGATGAAGCTC+CGG | 0.509164 | 1_3:-63151328 | Msa0132170:CDS |
| TCCTGTCCCTAATCCGTGAC+CGG | 0.513210 | 1_3:+63151346 | None:intergenic |
| TGAACTGCAGAATTTCTCCC+AGG | 0.530982 | 1_3:-63151004 | Msa0132170:intron |
| CCAAGGACATAGATATCAGC+AGG | 0.535441 | 1_3:+63150744 | None:intergenic |
| GCCGGTCACGGATTAGGGAC+AGG | 0.536950 | 1_3:-63151347 | Msa0132170:CDS |
| TTAGAGTATGTGTTGGGACA+TGG | 0.539774 | 1_3:-63150830 | Msa0132170:intron |
| CAGAGTGGGGAAGCCGGTCA+CGG | 0.545381 | 1_3:-63151359 | Msa0132170:CDS |
| ATATAAATAGCCATGAGGAA+AGG | 0.550987 | 1_3:+63160057 | None:intergenic |
| TGTGTTGGGACATGGAATGT+TGG | 0.555711 | 1_3:-63150822 | Msa0132170:CDS |
| ATAGAATTTATGGGCAACAA+TGG | 0.563404 | 1_3:-63151756 | Msa0132170:intron |
| GAAACTGATTCAGACAATGA+AGG | 0.567354 | 1_3:-63151641 | Msa0132170:intron |
| ATGGCTTAACATTAAAAGGA+AGG | 0.567804 | 1_3:-63151723 | Msa0132170:CDS |
| TAGTCACCATCTGATTCAGC+CGG | 0.571583 | 1_3:+63151309 | None:intergenic |
| ATTGTGCAGAGTGGGGAAGC+CGG | 0.586219 | 1_3:-63151365 | Msa0132170:intron |
| TCAATATCAAAGTCATTAGG+TGG | 0.586310 | 1_3:+63150789 | None:intergenic |
| GTCTCAATATATAAACAAGA+AGG | 0.590829 | 1_3:-63150951 | Msa0132170:CDS |
| GAAGCTCCGGCTGAATCAGA+TGG | 0.599862 | 1_3:-63151315 | Msa0132170:intron |
| GTTGGGACATGGAATGTTGG+AGG | 0.610467 | 1_3:-63150819 | Msa0132170:CDS |
| AATTTCTCCCAGGCTTAAGG+AGG | 0.618284 | 1_3:-63150994 | Msa0132170:CDS |
| ACGGATTAGGGACAGGAGAG+AGG | 0.618825 | 1_3:-63151340 | Msa0132170:CDS |
| TCAAGTGTACTTGCAAGCAA+CGG | 0.640190 | 1_3:-63159925 | Msa0132170:five_prime_UTR |
| TATAACAAGAAGATATGTAG+TGG | 0.643028 | 1_3:+63159957 | None:intergenic |
| GGACATAGATATCAGCAGGA+TGG | 0.644979 | 1_3:+63150748 | None:intergenic |
| TTTAGTGTGAAACTTACCCA+AGG | 0.661627 | 1_3:+63150727 | None:intergenic |
| ACGGTTGCAACAGCTGACGA+AGG | 0.696375 | 1_3:-63159906 | Msa0132170:five_prime_UTR |
| ATATAAACAAGAAGGAACTG+AGG | 0.702635 | 1_3:-63150943 | Msa0132170:intron |
| AGTTAATATAAATAGCCATG+AGG | 0.717619 | 1_3:+63160052 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTAATTTTCTTTTTGA+AGG | + | chr1_3:63150961-63150980 | None:intergenic | 10.0% |
| !! | AAAATTAAAAAAAGAGAATA+AGG | - | chr1_3:63150969-63150988 | Msa0132170:CDS | 10.0% |
| !! | AAATTAAAAAAAGAGAATAA+GGG | - | chr1_3:63150970-63150989 | Msa0132170:CDS | 10.0% |
| !!! | AGTTTTTTTTTTAAGAAATA+AGG | + | chr1_3:63151267-63151286 | None:intergenic | 10.0% |
| !!! | TATTTTTTTACAAATAGATT+GGG | + | chr1_3:63151380-63151399 | None:intergenic | 10.0% |
| !!! | TTATTTTTTTACAAATAGAT+TGG | + | chr1_3:63151381-63151400 | None:intergenic | 10.0% |
| !!! | ATGATATTATATTTGTTATA+TGG | - | chr1_3:63151610-63151629 | Msa0132170:intron | 10.0% |
| !!! | ATTATTTTGATTAAAAGTAT+TGG | + | chr1_3:63151698-63151717 | None:intergenic | 10.0% |
| !! | TTTATATGAAATAAGAATAA+CGG | - | chr1_3:63151752-63151771 | Msa0132170:CDS | 10.0% |
| !! | ATATATGTTTAATCTATTTA+GGG | - | chr1_3:63152372-63152391 | Msa0132170:intron | 10.0% |
| !! | TTAAAAAATTTAAGAGTTTA+AGG | - | chr1_3:63152768-63152787 | Msa0132170:intron | 10.0% |
| !!! | TATAAGTAAATTTTTTTTGT+AGG | - | chr1_3:63152828-63152847 | Msa0132170:intron | 10.0% |
| !!! | ATAAGTAAATTTTTTTTGTA+GGG | - | chr1_3:63152829-63152848 | Msa0132170:intron | 10.0% |
| !! | ATTTATCATCAAATTAAATA+AGG | - | chr1_3:63152936-63152955 | Msa0132170:intron | 10.0% |
| !!! | AATATGAATTTTTATATGTT+TGG | - | chr1_3:63153191-63153210 | Msa0132170:intron | 10.0% |
| !! | ACAAAAATTTACTTAATAAT+AGG | - | chr1_3:63153323-63153342 | Msa0132170:intron | 10.0% |
| !! | CAAAAATTTACTTAATAATA+GGG | - | chr1_3:63153324-63153343 | Msa0132170:intron | 10.0% |
| !!! | TATACATAAGTTTTTTTTTA+GGG | - | chr1_3:63153764-63153783 | Msa0132170:intron | 10.0% |
| !! | AACACTAATTTATTTATATT+TGG | + | chr1_3:63153885-63153904 | None:intergenic | 10.0% |
| !! | AAAAAAAAAATTGTAACTTA+CGG | - | chr1_3:63154387-63154406 | Msa0132170:intron | 10.0% |
| !!! | ATAAATTGTTATTTAATCAA+TGG | - | chr1_3:63154775-63154794 | Msa0132170:intron | 10.0% |
| !!! | TGATTTAATAGTTTTTTATT+TGG | + | chr1_3:63154876-63154895 | None:intergenic | 10.0% |
| !! | ATAAAAAACTATTAAATCAA+TGG | - | chr1_3:63154877-63154896 | Msa0132170:intron | 10.0% |
| !! | TAAAAAAAATTAGATATGTT+TGG | - | chr1_3:63156118-63156137 | Msa0132170:intron | 10.0% |
| !! | ATTAATTAATTTAGTAACTT+TGG | - | chr1_3:63157575-63157594 | Msa0132170:intron | 10.0% |
| !! | TATTGTAATTAATAAAACAT+TGG | - | chr1_3:63158957-63158976 | Msa0132170:intron | 10.0% |
| !!! | AATCACTTTTTTTTTTTTTA+TGG | - | chr1_3:63159920-63159939 | Msa0132170:five_prime_UTR | 10.0% |
| !! | ATTAATTAATTATAGAGAAG+AGG | + | chr1_3:63150750-63150769 | None:intergenic | 15.0% |
| !! | ATGTTAAGAATATAAAACAA+TGG | + | chr1_3:63151185-63151204 | None:intergenic | 15.0% |
| !!! | TTAAGTTTAATTTGTCTATT+TGG | + | chr1_3:63151242-63151261 | None:intergenic | 15.0% |
| !!! | ATTTTTTTACAAATAGATTG+GGG | + | chr1_3:63151379-63151398 | None:intergenic | 15.0% |
| !!! | TATTATATTTGTTATATGGT+TGG | - | chr1_3:63151614-63151633 | Msa0132170:intron | 15.0% |
| !! | TTATTTATAGTGTTTACTTT+AGG | - | chr1_3:63152125-63152144 | Msa0132170:intron | 15.0% |
| !! | TATTTATAGTGTTTACTTTA+GGG | - | chr1_3:63152126-63152145 | Msa0132170:intron | 15.0% |
| !! | TTTATACAATAATTCATGAT+CGG | - | chr1_3:63152262-63152281 | Msa0132170:intron | 15.0% |
| !! | AGATTAAACATATATCATTA+TGG | + | chr1_3:63152367-63152386 | None:intergenic | 15.0% |
| !! | GATATATGTTTAATCTATTT+AGG | - | chr1_3:63152371-63152390 | Msa0132170:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | + | chr1_3:63152858-63152877 | None:intergenic | 15.0% |
| !! | AAGCATAAATTAAACAAATT+TGG | + | chr1_3:63152518-63152537 | None:intergenic | 15.0% |
| !!! | AATTTTTGCGATATTTTTTT+CGG | + | chr1_3:63152602-63152621 | None:intergenic | 15.0% |
| !! | AGATATAAGTAACAAAAATA+TGG | + | chr1_3:63152637-63152656 | None:intergenic | 15.0% |
| !!! | TAAACAAAATTTATTTTAGC+AGG | - | chr1_3:63152796-63152815 | Msa0132170:intron | 15.0% |
| !!! | AAACAAAATTTATTTTAGCA+GGG | - | chr1_3:63152797-63152816 | Msa0132170:intron | 15.0% |
| !! | AATGCTATTAAAATTAAGTA+AGG | - | chr1_3:63152858-63152877 | Msa0132170:intron | 15.0% |
| !!! | TAATTTGATGATAAATAGAT+GGG | + | chr1_3:63152932-63152951 | None:intergenic | 15.0% |
| !!! | TTAATTTGATGATAAATAGA+TGG | + | chr1_3:63152933-63152952 | None:intergenic | 15.0% |
| !!! | AATAAGGTTAAATATGTTTT+TGG | - | chr1_3:63152952-63152971 | Msa0132170:intron | 15.0% |
| !!! | TTCATATTTAATTCATGTTT+TGG | + | chr1_3:63153179-63153198 | None:intergenic | 15.0% |
| !!! | AAGTTGAAGAAATTTTTTAA+AGG | - | chr1_3:63153383-63153402 | Msa0132170:intron | 15.0% |
| !!! | AGTTGAAGAAATTTTTTAAA+GGG | - | chr1_3:63153384-63153403 | Msa0132170:intron | 15.0% |
| !! | GAAAAATTGGTATATTTATA+GGG | - | chr1_3:63153415-63153434 | Msa0132170:intron | 15.0% |
| !! | AACACATTAAATTTACTAAA+TGG | + | chr1_3:63153682-63153701 | None:intergenic | 15.0% |
| !! | AATTTAATGTGTTAAATTAG+TGG | - | chr1_3:63153689-63153708 | Msa0132170:intron | 15.0% |
| !!! | CTATACATAAGTTTTTTTTT+AGG | - | chr1_3:63153763-63153782 | Msa0132170:intron | 15.0% |
| !! | AGAAAAAAAAAAGAGAATTT+AGG | + | chr1_3:63153819-63153838 | None:intergenic | 15.0% |
| !!! | ATTTATTTTTATTTCTGAAC+AGG | + | chr1_3:63154035-63154054 | None:intergenic | 15.0% |
| !! | AATTATAAGCAATATCAAAA+GGG | + | chr1_3:63154283-63154302 | None:intergenic | 15.0% |
| !! | TAATTATAAGCAATATCAAA+AGG | + | chr1_3:63154284-63154303 | None:intergenic | 15.0% |
| !!! | TTTTGATATTGCTTATAATT+AGG | - | chr1_3:63154283-63154302 | Msa0132170:intron | 15.0% |
| !!! | AGTTACAATTTTTTTTTTGT+TGG | + | chr1_3:63154385-63154404 | None:intergenic | 15.0% |
| !!! | TTAATAGTTTTTTATTTGGA+TGG | + | chr1_3:63154872-63154891 | None:intergenic | 15.0% |
| !!! | TAGAGTATTTTTTGTAATTT+TGG | + | chr1_3:63155757-63155776 | None:intergenic | 15.0% |
| !!! | TGACAAATTTTTCTTTTTAT+CGG | - | chr1_3:63156591-63156610 | Msa0132170:intron | 15.0% |
| !!! | TATTATGATAATGTACAAAA+AGG | - | chr1_3:63157223-63157242 | Msa0132170:intron | 15.0% |
| !! | AAAAAAAAAATTTAGACTGT+TGG | - | chr1_3:63157344-63157363 | Msa0132170:intron | 15.0% |
| !! | AAATAATAATGATGTCATAT+GGG | + | chr1_3:63157458-63157477 | None:intergenic | 15.0% |
| !! | AAAATAATAATGATGTCATA+TGG | + | chr1_3:63157459-63157478 | None:intergenic | 15.0% |
| !! | ATATATTAAAGCCATTTAAT+TGG | - | chr1_3:63157946-63157965 | Msa0132170:intron | 15.0% |
| !!! | TAAGTTTAGATTTTCTATAA+TGG | + | chr1_3:63158136-63158155 | None:intergenic | 15.0% |
| !! | ATTAATTTAAATTCCATACA+AGG | - | chr1_3:63158184-63158203 | Msa0132170:intron | 15.0% |
| !! | ATTTCTTTATAAATTCTAGT+CGG | - | chr1_3:63158651-63158670 | Msa0132170:intron | 15.0% |
| !!! | TCTTTGTTTATAGAATTTAT+GGG | - | chr1_3:63158788-63158807 | Msa0132170:intron | 15.0% |
| !!! | CATTTTTCGATTTAAATTTA+GGG | + | chr1_3:63159436-63159455 | None:intergenic | 15.0% |
| !! | TATTAAAAGTGATTTCAAAA+TGG | + | chr1_3:63159887-63159906 | None:intergenic | 15.0% |
| !! | TCCTCTTAAACATAAATAAA+GGG | + | chr1_3:63150866-63150885 | None:intergenic | 20.0% |
| !! | TTCCTCTTAAACATAAATAA+AGG | + | chr1_3:63150867-63150886 | None:intergenic | 20.0% |
| !! | AGATCTTAACCATAAATAAA+GGG | + | chr1_3:63150921-63150940 | None:intergenic | 20.0% |
| !! | TAGATCTTAACCATAAATAA+AGG | + | chr1_3:63150922-63150941 | None:intergenic | 20.0% |
| !! | TTAAGATCTAAATAGAGTAA+GGG | - | chr1_3:63150932-63150951 | Msa0132170:intron | 20.0% |
| !!! | ATGTCATTTTTTCACTTTAT+AGG | + | chr1_3:63151135-63151154 | None:intergenic | 20.0% |
| !! | TCTAGATTGGATAATTAATA+AGG | + | chr1_3:63151295-63151314 | None:intergenic | 20.0% |
| !! | TGGTTATACTTAAAAATTGT+TGG | + | chr1_3:63151343-63151362 | None:intergenic | 20.0% |
| !! | AATCCCATATATAATTATGA+AGG | - | chr1_3:63151434-63151453 | Msa0132170:intron | 20.0% |
| !! | ACTCCTTCATAATTATATAT+GGG | + | chr1_3:63151440-63151459 | None:intergenic | 20.0% |
| !! | TACTCCTTCATAATTATATA+TGG | + | chr1_3:63151441-63151460 | None:intergenic | 20.0% |
| !!! | AATTTGCTTAAGGTTATAAT+TGG | + | chr1_3:63151523-63151542 | None:intergenic | 20.0% |
| !!! | GTACATTATATACCTTTTAT+AGG | + | chr1_3:63152237-63152256 | None:intergenic | 20.0% |
| !!! | TTTAGGGTTAATTATGTTTT+TGG | - | chr1_3:63152388-63152407 | Msa0132170:intron | 20.0% |
| !!! | GTTTTTCAACAATTTTTTAC+AGG | - | chr1_3:63152548-63152567 | Msa0132170:intron | 20.0% |
| !! | GAAAAGTTGACATATTTATA+AGG | + | chr1_3:63152979-63152998 | None:intergenic | 20.0% |
| !!! | AGTTGAAGAAAAATTTTAGA+TGG | + | chr1_3:63153010-63153029 | None:intergenic | 20.0% |
| !!! | TATGAGTTTACTTTAAAAGA+GGG | + | chr1_3:63153070-63153089 | None:intergenic | 20.0% |
| !!! | ATATGAGTTTACTTTAAAAG+AGG | + | chr1_3:63153071-63153090 | None:intergenic | 20.0% |
| !!! | ATGAATTTTTATATGTTTGG+TGG | - | chr1_3:63153194-63153213 | Msa0132170:intron | 20.0% |
| !!! | TGTTGGTTGAAAATTTTATA+GGG | - | chr1_3:63153355-63153374 | Msa0132170:intron | 20.0% |
| !! | CGAAAAATTGGTATATTTAT+AGG | - | chr1_3:63153414-63153433 | Msa0132170:intron | 20.0% |
| !!! | AATTGGGTTAAATATGTTTT+TGG | + | chr1_3:63153442-63153461 | None:intergenic | 20.0% |
| !! | GAGATGTCTATATTTAAATT+GGG | + | chr1_3:63153458-63153477 | None:intergenic | 20.0% |
| !! | TGAGATGTCTATATTTAAAT+TGG | + | chr1_3:63153459-63153478 | None:intergenic | 20.0% |
| !!! | ACTTGTGGAATTTTAAATTT+TGG | - | chr1_3:63153478-63153497 | Msa0132170:intron | 20.0% |
| !! | GGAAATTATTATACATAAGT+TGG | - | chr1_3:63153785-63153804 | Msa0132170:intron | 20.0% |
| !! | TTCATTCATCCTTATAATTT+CGG | - | chr1_3:63154163-63154182 | Msa0132170:intron | 20.0% |
| !!! | TTATAATTAGGTACTGTTAT+TGG | - | chr1_3:63154295-63154314 | Msa0132170:intron | 20.0% |
| !! | AAAATGAATGAATAAGAATG+AGG | - | chr1_3:63154466-63154485 | Msa0132170:intron | 20.0% |
| !!! | TATATGATTTTTAGTGATGA+TGG | - | chr1_3:63154559-63154578 | Msa0132170:intron | 20.0% |
| !!! | TGATTTCGATTGTTATTTTT+TGG | - | chr1_3:63154607-63154626 | Msa0132170:intron | 20.0% |
| !!! | GATTTCGATTGTTATTTTTT+GGG | - | chr1_3:63154608-63154627 | Msa0132170:intron | 20.0% |
| !!! | TACTGTTTTTTTTTTCTTCT+GGG | - | chr1_3:63154642-63154661 | Msa0132170:intron | 20.0% |
| !!! | AATTGTTATTTAATCAATGG+TGG | - | chr1_3:63154778-63154797 | Msa0132170:intron | 20.0% |
| !!! | ATTGTTATTTAATCAATGGT+GGG | - | chr1_3:63154779-63154798 | Msa0132170:intron | 20.0% |
| !!! | TAATTGTTGTAACTTTTTGA+TGG | + | chr1_3:63154831-63154850 | None:intergenic | 20.0% |
| !! | AATATTCACATCTTTAATGT+CGG | + | chr1_3:63154987-63155006 | None:intergenic | 20.0% |
| !! | TAATTCTCATGTTTACTAAA+CGG | + | chr1_3:63155565-63155584 | None:intergenic | 20.0% |
| !! | ATAAATAAGTGATCAAATTG+AGG | - | chr1_3:63155993-63156012 | Msa0132170:intron | 20.0% |
| !!! | AATCTTTTTTTATATCTTGC+CGG | + | chr1_3:63156198-63156217 | None:intergenic | 20.0% |
| !! | TGATAAAATATAAGTCAAGT+GGG | + | chr1_3:63156460-63156479 | None:intergenic | 20.0% |
| !! | ATGATAAAATATAAGTCAAG+TGG | + | chr1_3:63156461-63156480 | None:intergenic | 20.0% |
| !!! | ACTTGACTTATATTTTATCA+TGG | - | chr1_3:63156460-63156479 | Msa0132170:intron | 20.0% |
| !! | TTTATAGACAAATACGTAAT+TGG | + | chr1_3:63157072-63157091 | None:intergenic | 20.0% |
| !! | TCTTCAATGAGAAAAATATT+AGG | + | chr1_3:63157125-63157144 | None:intergenic | 20.0% |
| !! | AATAATAATGATGTCATATG+GGG | + | chr1_3:63157457-63157476 | None:intergenic | 20.0% |
| !!! | TTAGTTTTAACATGTTTTTG+AGG | - | chr1_3:63157656-63157675 | Msa0132170:intron | 20.0% |
| !!! | ATCAAAGAAGTATAGTAATT+TGG | - | chr1_3:63157983-63158002 | Msa0132170:intron | 20.0% |
| !!! | TGTATTTTATTATATCTGCT+AGG | - | chr1_3:63158085-63158104 | Msa0132170:intron | 20.0% |
| !!! | ATGGCTTATTTTTATAATAC+TGG | - | chr1_3:63158578-63158597 | Msa0132170:intron | 20.0% |
| !!! | ATTTTTATAATACTGGATAC+CGG | - | chr1_3:63158585-63158604 | Msa0132170:intron | 20.0% |
| !!! | GTCTTTGTTTATAGAATTTA+TGG | - | chr1_3:63158787-63158806 | Msa0132170:intron | 20.0% |
| !!! | CCATTTTTCGATTTAAATTT+AGG | + | chr1_3:63159437-63159456 | None:intergenic | 20.0% |
| !! | CCTAAATTTAAATCGAAAAA+TGG | - | chr1_3:63159434-63159453 | Msa0132170:intron | 20.0% |
| ! | AGTTAATATAAATAGCCATG+AGG | + | chr1_3:63150504-63150523 | None:intergenic | 25.0% |
| ! | TATAACAAGAAGATATGTAG+TGG | + | chr1_3:63150599-63150618 | None:intergenic | 25.0% |
| !! | TCCCTTTATTTATGTTTAAG+AGG | - | chr1_3:63150862-63150881 | Msa0132170:intron | 25.0% |
| ! | CCATAAATAAAGGGAAATAA+AGG | + | chr1_3:63150912-63150931 | None:intergenic | 25.0% |
| !! | CCTTTATTTCCCTTTATTTA+TGG | - | chr1_3:63150909-63150928 | Msa0132170:intron | 25.0% |
| ! | GTTAAGATCTAAATAGAGTA+AGG | - | chr1_3:63150931-63150950 | Msa0132170:intron | 25.0% |
| !! | ATTGGGGATATTTTCATAAT+TGG | + | chr1_3:63151363-63151382 | None:intergenic | 25.0% |
| ! | CCAACAAAATAACATTATGA+TGG | + | chr1_3:63151549-63151568 | None:intergenic | 25.0% |
| !!! | CCATCATAATGTTATTTTGT+TGG | - | chr1_3:63151546-63151565 | Msa0132170:intron | 25.0% |
| !!! | AAATAAGAATAACGGACATA+CGG | - | chr1_3:63151760-63151779 | Msa0132170:intron | 25.0% |
| !!! | TACTAGATTTTTGTTGTTGA+CGG | - | chr1_3:63151936-63151955 | Msa0132170:intron | 25.0% |
| ! | GAAGTTAAACCGATAAAATA+AGG | - | chr1_3:63151979-63151998 | Msa0132170:intron | 25.0% |
| !!! | ATCTCGATTCCTTATTTTAT+CGG | + | chr1_3:63151991-63152010 | None:intergenic | 25.0% |
| ! | AAATAAGGAATCGAGATAAA+AGG | - | chr1_3:63151994-63152013 | Msa0132170:intron | 25.0% |
| ! | CTCATAGAAATGAACATTAT+AGG | - | chr1_3:63152042-63152061 | Msa0132170:CDS | 25.0% |
| ! | ATGAACATTATAGGTTTAAG+TGG | - | chr1_3:63152051-63152070 | Msa0132170:CDS | 25.0% |
| ! | TGAACATTATAGGTTTAAGT+GGG | - | chr1_3:63152052-63152071 | Msa0132170:intron | 25.0% |
| ! | TTCGTTACGAGATTTATAAT+TGG | - | chr1_3:63152099-63152118 | Msa0132170:intron | 25.0% |
| !! | TAGCCATGTTGTTTATTTAA+TGG | + | chr1_3:63152214-63152233 | None:intergenic | 25.0% |
| ! | AAACAAATTTGGATTGAGTA+AGG | + | chr1_3:63152507-63152526 | None:intergenic | 25.0% |
| ! | GTGTTAAGAACGTTATTAAA+AGG | - | chr1_3:63152572-63152591 | Msa0132170:intron | 25.0% |
| !!! | AGATGGGTTAATTATGTTTT+TGG | + | chr1_3:63152916-63152935 | None:intergenic | 25.0% |
| !! | AAGTGAAGATGGAAAATTTT+TGG | + | chr1_3:63153042-63153061 | None:intergenic | 25.0% |
| !! | AAATTTTCCATCTTCACTTT+TGG | - | chr1_3:63153043-63153062 | Msa0132170:intron | 25.0% |
| !! | AAATTTTCAACCAACACTTT+TGG | + | chr1_3:63153351-63153370 | None:intergenic | 25.0% |
| !!! | GTGTTGGTTGAAAATTTTAT+AGG | - | chr1_3:63153354-63153373 | Msa0132170:intron | 25.0% |
| ! | TATACTGGAAAAAGCAAAAA+AGG | + | chr1_3:63154081-63154100 | None:intergenic | 25.0% |
| ! | TCATTCATCCTTATAATTTC+GGG | - | chr1_3:63154164-63154183 | Msa0132170:intron | 25.0% |
| !!! | CTACTGTTTTTTTTTTCTTC+TGG | - | chr1_3:63154641-63154660 | Msa0132170:intron | 25.0% |
| !!! | TTGTTATTTAATCAATGGTG+GGG | - | chr1_3:63154780-63154799 | Msa0132170:intron | 25.0% |
| ! | TTACAACAATTATCAAGTCA+TGG | - | chr1_3:63154839-63154858 | Msa0132170:intron | 25.0% |
| ! | AACTATTAAATCAATGGATG+TGG | - | chr1_3:63154883-63154902 | Msa0132170:intron | 25.0% |
| ! | ATATTTCTTTACGTCTTACA+TGG | - | chr1_3:63155002-63155021 | Msa0132170:intron | 25.0% |
| ! | CAGCTCATCTAAATTAATAT+TGG | + | chr1_3:63155271-63155290 | None:intergenic | 25.0% |
| !! | TAGCTGATTTATATTGTGTT+CGG | - | chr1_3:63155316-63155335 | Msa0132170:intron | 25.0% |
| !!! | ATGACATGTCGATTTTTATT+TGG | - | chr1_3:63155438-63155457 | Msa0132170:intron | 25.0% |
| !!! | TGACATGTCGATTTTTATTT+GGG | - | chr1_3:63155439-63155458 | Msa0132170:intron | 25.0% |
| !!! | TGATATTTTTAGACAACACA+AGG | + | chr1_3:63155519-63155538 | None:intergenic | 25.0% |
| ! | GGACTCTAAATATCATAAAT+TGG | + | chr1_3:63155544-63155563 | None:intergenic | 25.0% |
| ! | AACATTCATTATCTTCAACT+AGG | - | chr1_3:63155629-63155648 | Msa0132170:intron | 25.0% |
| ! | ACATTCATTATCTTCAACTA+GGG | - | chr1_3:63155630-63155649 | Msa0132170:intron | 25.0% |
| !! | AAAATTAGATATGTTTGGTG+TGG | - | chr1_3:63156123-63156142 | Msa0132170:intron | 25.0% |
| !! | ATATTTTATCATGGATGAGA+CGG | - | chr1_3:63156469-63156488 | Msa0132170:intron | 25.0% |
| ! | ACATTAGAAAGAGAAAAAGA+AGG | - | chr1_3:63156620-63156639 | Msa0132170:intron | 25.0% |
| ! | ATACTGAAATGACAAAGAAA+AGG | + | chr1_3:63156891-63156910 | None:intergenic | 25.0% |
| ! | TTGTTCAACAATCAACAATA+TGG | - | chr1_3:63156917-63156936 | Msa0132170:intron | 25.0% |
| !! | ATTTTTCTCATTGAAGATGT+TGG | - | chr1_3:63157128-63157147 | Msa0132170:intron | 25.0% |
| !! | TTTTTCTCATTGAAGATGTT+GGG | - | chr1_3:63157129-63157148 | Msa0132170:intron | 25.0% |
| ! | TATGGACATAATTCAATGTT+CGG | - | chr1_3:63157164-63157183 | Msa0132170:intron | 25.0% |
| !!! | CAAAAAGGTACTTTATTGTA+TGG | - | chr1_3:63157238-63157257 | Msa0132170:intron | 25.0% |
| !! | AATTTTGTGTGTAGAATTGA+CGG | - | chr1_3:63157413-63157432 | Msa0132170:intron | 25.0% |
| !!! | TTTTTGAGGTTTATGATTTG+TGG | - | chr1_3:63157670-63157689 | Msa0132170:intron | 25.0% |
| !! | ATGGAGTATTACCAATTATA+AGG | + | chr1_3:63157906-63157925 | None:intergenic | 25.0% |
| !!! | ATGATTAGTCTACTAACATA+TGG | + | chr1_3:63157925-63157944 | None:intergenic | 25.0% |
| ! | TTTAGTGCAAACCAATTAAA+TGG | + | chr1_3:63157960-63157979 | None:intergenic | 25.0% |
| !! | AAAGAAGTATAGTAATTTGG+AGG | - | chr1_3:63157986-63158005 | Msa0132170:intron | 25.0% |
| ! | TTCACATGCAAATATTTGAA+TGG | + | chr1_3:63158112-63158131 | None:intergenic | 25.0% |
| ! | ATTCCATACAAGGAAAAAAA+AGG | - | chr1_3:63158194-63158213 | Msa0132170:intron | 25.0% |
| !!! | CTTATTTTTATACTGGATAC+CGG | - | chr1_3:63158442-63158461 | Msa0132170:intron | 25.0% |
| ! | TTATAAAAATAAGCCATGCA+AGG | + | chr1_3:63158575-63158594 | None:intergenic | 25.0% |
| ! | ACCTTATCTATAATCTATGT+GGG | - | chr1_3:63158674-63158693 | Msa0132170:intron | 25.0% |
| ! | AGACTATTCATTTGAAGATT+TGG | - | chr1_3:63159011-63159030 | Msa0132170:intron | 25.0% |
| ! | ATTTGAAGATTTGGAAATTG+AGG | - | chr1_3:63159020-63159039 | Msa0132170:intron | 25.0% |
| !! | TGATCTGTCTCAATTTTATT+TGG | - | chr1_3:63159161-63159180 | Msa0132170:intron | 25.0% |
| !!! | GATCTGTCTCAATTTTATTT+GGG | - | chr1_3:63159162-63159181 | Msa0132170:intron | 25.0% |
| ! | GTCTCAATATATAAACAAGA+AGG | - | chr1_3:63159602-63159621 | Msa0132170:intron | 25.0% |
| !! | TTTTCTATTAGAGTATGTGT+TGG | - | chr1_3:63159716-63159735 | Msa0132170:intron | 25.0% |
| ! | TTTCTATTAGAGTATGTGTT+GGG | - | chr1_3:63159717-63159736 | Msa0132170:intron | 25.0% |
| ! | TCATCAATATCAAAGTCATT+AGG | + | chr1_3:63159770-63159789 | None:intergenic | 25.0% |
| !! | ATGACTTTGATATTGATGAT+TGG | - | chr1_3:63159771-63159790 | Msa0132170:intron | 25.0% |
| ! | TGCATATACACTCAAATATA+AGG | - | chr1_3:63159861-63159880 | Msa0132170:intron | 25.0% |
| TATAAATAGCCATGAGGAAA+GGG | + | chr1_3:63150498-63150517 | None:intergenic | 30.0% | |
| ATATAAATAGCCATGAGGAA+AGG | + | chr1_3:63150499-63150518 | None:intergenic | 30.0% | |
| ACTCTACATGTAGTATGAAT+TGG | - | chr1_3:63150521-63150540 | Msa0132170:three_prime_UTR | 30.0% | |
| CTCTACATGTAGTATGAATT+GGG | - | chr1_3:63150522-63150541 | Msa0132170:three_prime_UTR | 30.0% | |
| !! | AAGATATGTAGTGGATTAGT+AGG | + | chr1_3:63150590-63150609 | None:intergenic | 30.0% |
| AGAAGAGGAGAAATAGAAAA+AGG | + | chr1_3:63150735-63150754 | None:intergenic | 30.0% | |
| ! | TTTCTTGTCTTATTGAGAAG+AGG | + | chr1_3:63150818-63150837 | None:intergenic | 30.0% |
| AGGAACTTCAAAAAGAGTAA+GGG | - | chr1_3:63150882-63150901 | Msa0132170:intron | 30.0% | |
| AAACCTTCTCTCAATATTTG+AGG | - | chr1_3:63150996-63151015 | Msa0132170:CDS | 30.0% | |
| AACCTTCTCTCAATATTTGA+GGG | - | chr1_3:63150997-63151016 | Msa0132170:CDS | 30.0% | |
| TGAATATGCTAACAAACACT+TGG | - | chr1_3:63151040-63151059 | Msa0132170:intron | 30.0% | |
| ! | TAGAGTTTTCTCATCTAGAT+TGG | + | chr1_3:63151308-63151327 | None:intergenic | 30.0% |
| TGCTTAAGGTTATAATTGGA+AGG | + | chr1_3:63151519-63151538 | None:intergenic | 30.0% | |
| ! | ATGATGGTCAAATTTGCTTA+AGG | + | chr1_3:63151533-63151552 | None:intergenic | 30.0% |
| AACGTTGCTGTAAATATAAC+TGG | - | chr1_3:63151788-63151807 | Msa0132170:intron | 30.0% | |
| ATACTGCCAGACTTAATTAA+TGG | - | chr1_3:63151872-63151891 | Msa0132170:intron | 30.0% | |
| TACTGCCAGACTTAATTAAT+GGG | - | chr1_3:63151873-63151892 | Msa0132170:intron | 30.0% | |
| TGTTTCCCATTAATTAAGTC+TGG | + | chr1_3:63151881-63151900 | None:intergenic | 30.0% | |
| !! | TCGAGATAAAAGGTACTATT+TGG | - | chr1_3:63152004-63152023 | Msa0132170:intron | 30.0% |
| TATTTCCACTCATAAAGTTG+AGG | + | chr1_3:63152154-63152173 | None:intergenic | 30.0% | |
| TGAGTGGAAATATGTTTAAG+TGG | - | chr1_3:63152162-63152181 | Msa0132170:intron | 30.0% | |
| GCTCCATTAAATAAACAACA+TGG | - | chr1_3:63152208-63152227 | Msa0132170:intron | 30.0% | |
| AAGTAAGGACTAAACTTACA+AGG | + | chr1_3:63152431-63152450 | None:intergenic | 30.0% | |
| !!! | GAGTGCAGATTTTTTTTGTA+GGG | + | chr1_3:63152475-63152494 | None:intergenic | 30.0% |
| !!! | TTTTGCGATATTTTTTTCGG+AGG | + | chr1_3:63152599-63152618 | None:intergenic | 30.0% |
| ! | CAAGTTTAGAACACTATGAA+AGG | + | chr1_3:63152734-63152753 | None:intergenic | 30.0% |
| AAGTAAGGACTAAAGTTACA+AGG | - | chr1_3:63152873-63152892 | Msa0132170:intron | 30.0% | |
| !! | TGAAGATGGAAAATTTTTGG+AGG | + | chr1_3:63153039-63153058 | None:intergenic | 30.0% |
| AAGGGACTAAAACGAAAAAT+TGG | - | chr1_3:63153402-63153421 | Msa0132170:intron | 30.0% | |
| AAATATAGACATCTCACTTG+TGG | - | chr1_3:63153463-63153482 | Msa0132170:intron | 30.0% | |
| TCATATTCTATGAAGAAGAG+TGG | - | chr1_3:63153504-63153523 | Msa0132170:intron | 30.0% | |
| !! | CTGTTCGATTGATAGTTTTA+TGG | - | chr1_3:63153734-63153753 | Msa0132170:intron | 30.0% |
| TCTATTGTCCCGAAATTATA+AGG | + | chr1_3:63154175-63154194 | None:intergenic | 30.0% | |
| TTGATGAATGTATGAAGAGA+TGG | - | chr1_3:63154672-63154691 | Msa0132170:intron | 30.0% | |
| !! | GTAACTTTTTGATGGTTACA+TGG | + | chr1_3:63154823-63154842 | None:intergenic | 30.0% |
| AGCTTTCTCAATACCAAATA+GGG | - | chr1_3:63155075-63155094 | Msa0132170:intron | 30.0% | |
| CTGTACAATCCATTTAGATT+GGG | - | chr1_3:63155182-63155201 | Msa0132170:intron | 30.0% | |
| !!! | ATGGTGTTGACTTAGAATTT+TGG | - | chr1_3:63155208-63155227 | Msa0132170:intron | 30.0% |
| !!! | TGGTGTTGACTTAGAATTTT+GGG | - | chr1_3:63155209-63155228 | Msa0132170:intron | 30.0% |
| !!! | GACATGTCGATTTTTATTTG+GGG | - | chr1_3:63155440-63155459 | Msa0132170:intron | 30.0% |
| ACATGAATGCATATGAATGA+CGG | + | chr1_3:63155487-63155506 | None:intergenic | 30.0% | |
| CATTCATTATCTTCAACTAG+GGG | - | chr1_3:63155631-63155650 | Msa0132170:intron | 30.0% | |
| !! | CTGCACTAGTTTAAAGTTTT+TGG | - | chr1_3:63156084-63156103 | Msa0132170:intron | 30.0% |
| GATATGATAGTTTATCCTCT+TGG | + | chr1_3:63156166-63156185 | None:intergenic | 30.0% | |
| CTATCATATCCTATATGAAC+CGG | - | chr1_3:63156176-63156195 | Msa0132170:intron | 30.0% | |
| !! | CATTTTAACAGCTCTATTAG+AGG | + | chr1_3:63156430-63156449 | None:intergenic | 30.0% |
| ! | AATTTCACCTAAACCTGTTT+TGG | - | chr1_3:63156738-63156757 | Msa0132170:intron | 30.0% |
| ! | ATTTCACCTAAACCTGTTTT+GGG | - | chr1_3:63156739-63156758 | Msa0132170:intron | 30.0% |
| !! | TTTCTTATAGGACTAGTTGT+GGG | - | chr1_3:63156833-63156852 | Msa0132170:intron | 30.0% |
| AAAGAAAAGGAGACATTAAG+GGG | + | chr1_3:63156878-63156897 | None:intergenic | 30.0% | |
| CAAAGAAAAGGAGACATTAA+GGG | + | chr1_3:63156879-63156898 | None:intergenic | 30.0% | |
| ACAAAGAAAAGGAGACATTA+AGG | + | chr1_3:63156880-63156899 | None:intergenic | 30.0% | |
| ! | CTTTGTCATTTCAGTATAGT+AGG | - | chr1_3:63156894-63156913 | Msa0132170:intron | 30.0% |
| CAATCAACAATATGGAGTAA+AGG | - | chr1_3:63156925-63156944 | Msa0132170:intron | 30.0% | |
| ATGTTGAGTGAACAATTCTT+AGG | - | chr1_3:63157026-63157045 | Msa0132170:intron | 30.0% | |
| ! | TTTTCTCATTGAAGATGTTG+GGG | - | chr1_3:63157130-63157149 | Msa0132170:intron | 30.0% |
| ! | TATTGTATGGTAGTGAAAAG+TGG | - | chr1_3:63157251-63157270 | Msa0132170:intron | 30.0% |
| TCATATGCAAGGACAAATTA+AGG | + | chr1_3:63157394-63157413 | None:intergenic | 30.0% | |
| ACACACAAAATTCATATGCA+AGG | + | chr1_3:63157405-63157424 | None:intergenic | 30.0% | |
| AGAGAAACATAGAAGAAATC+TGG | + | chr1_3:63157491-63157510 | None:intergenic | 30.0% | |
| CCAATTATAAGGCAATAAGT+GGG | + | chr1_3:63157895-63157914 | None:intergenic | 30.0% | |
| ACCAATTATAAGGCAATAAG+TGG | + | chr1_3:63157896-63157915 | None:intergenic | 30.0% | |
| !!! | AAGCCTTTTTTTTCCTTGTA+TGG | + | chr1_3:63158200-63158219 | None:intergenic | 30.0% |
| TTTGCATCTTCAAATACTGT+CGG | - | chr1_3:63158256-63158275 | Msa0132170:intron | 30.0% | |
| ! | TTTGAAACTGAAGCAAAAGA+AGG | + | chr1_3:63158316-63158335 | None:intergenic | 30.0% |
| GTATAAAAATAAGCCATGCA+AGG | + | chr1_3:63158435-63158454 | None:intergenic | 30.0% | |
| !!! | TGCATGGCTTATTTTTATAC+TGG | - | chr1_3:63158435-63158454 | Msa0132170:intron | 30.0% |
| GACCTTATCTATAATCTATG+TGG | - | chr1_3:63158673-63158692 | Msa0132170:intron | 30.0% | |
| TCCCACATAGATTATAGATA+AGG | + | chr1_3:63158678-63158697 | None:intergenic | 30.0% | |
| ATAGAATTTATGGGCAACAA+TGG | - | chr1_3:63158797-63158816 | Msa0132170:intron | 30.0% | |
| GCAAATGGCTTAACATTAAA+AGG | - | chr1_3:63158826-63158845 | Msa0132170:intron | 30.0% | |
| ATGGCTTAACATTAAAAGGA+AGG | - | chr1_3:63158830-63158849 | Msa0132170:intron | 30.0% | |
| GATTTGGAAATTGAGGATTA+TGG | - | chr1_3:63159027-63159046 | Msa0132170:intron | 30.0% | |
| TTGACAATTCTTCCTGTATT+AGG | - | chr1_3:63159390-63159409 | Msa0132170:intron | 30.0% | |
| ! | AATTTTGAATGGCCTAATAC+AGG | + | chr1_3:63159405-63159424 | None:intergenic | 30.0% |
| ATTAGGCCATTCAAAATTTG+TGG | - | chr1_3:63159407-63159426 | Msa0132170:intron | 30.0% | |
| ATATAAACAAGAAGGAACTG+AGG | - | chr1_3:63159610-63159629 | Msa0132170:intron | 30.0% | |
| TCAATATCAAAGTCATTAGG+TGG | + | chr1_3:63159767-63159786 | None:intergenic | 30.0% | |
| GATTAGTAGGTATACTGATC+AGG | + | chr1_3:63150577-63150596 | None:intergenic | 35.0% | |
| GAGGAACTTCAAAAAGAGTA+AGG | - | chr1_3:63150881-63150900 | Msa0132170:intron | 35.0% | |
| TTTGAGGGTCATTTCGTTTA+AGG | - | chr1_3:63151012-63151031 | Msa0132170:intron | 35.0% | |
| TTGAGGGTCATTTCGTTTAA+GGG | - | chr1_3:63151013-63151032 | Msa0132170:intron | 35.0% | |
| TAAAGTGCAAAAGCCCTAAA+AGG | - | chr1_3:63151849-63151868 | Msa0132170:intron | 35.0% | |
| CATTATAGGTTTAAGTGGGT+TGG | - | chr1_3:63152056-63152075 | Msa0132170:intron | 35.0% | |
| ACAACATGGCTACCTATAAA+AGG | - | chr1_3:63152222-63152241 | Msa0132170:intron | 35.0% | |
| AAATTGCTATGACGCATTGA+AGG | - | chr1_3:63152311-63152330 | Msa0132170:intron | 35.0% | |
| TACAAGGTCGCAAATTTGTA+GGG | + | chr1_3:63152415-63152434 | None:intergenic | 35.0% | |
| TTACAAGGTCGCAAATTTGT+AGG | + | chr1_3:63152416-63152435 | None:intergenic | 35.0% | |
| !!! | CGAGTGCAGATTTTTTTTGT+AGG | + | chr1_3:63152476-63152495 | None:intergenic | 35.0% |
| ! | TTACAAGGTCGCAATTTTGT+AGG | - | chr1_3:63152888-63152907 | Msa0132170:intron | 35.0% |
| ! | TACAAGGTCGCAATTTTGTA+GGG | - | chr1_3:63152889-63152908 | Msa0132170:intron | 35.0% |
| ! | ATAATAGGGACCAAAAGTGT+TGG | - | chr1_3:63153338-63153357 | Msa0132170:intron | 35.0% |
| ! | TAGAAGTGTGATCTCTCTTA+AGG | - | chr1_3:63153530-63153549 | Msa0132170:intron | 35.0% |
| AACCATTTAGATTTCAACCG+TGG | - | chr1_3:63153917-63153936 | Msa0132170:intron | 35.0% | |
| ATCCACGGTTGAAATCTAAA+TGG | + | chr1_3:63153922-63153941 | None:intergenic | 35.0% | |
| ! | TCTGAAATTCATCTGAGTGA+AGG | + | chr1_3:63154104-63154123 | None:intergenic | 35.0% |
| ! | GGACAATAGAGACTTCATTT+TGG | - | chr1_3:63154185-63154204 | Msa0132170:intron | 35.0% |
| ! | AACACTAGTTTGTGCATAAC+AGG | + | chr1_3:63154342-63154361 | None:intergenic | 35.0% |
| AGGATGAAGATGATGATTCT+AGG | - | chr1_3:63154486-63154505 | Msa0132170:intron | 35.0% | |
| ! | GGTTGTTGTTGTTATCATTG+AGG | - | chr1_3:63154507-63154526 | Msa0132170:intron | 35.0% |
| TTGTTATCATTGAGGAACCA+TGG | - | chr1_3:63154515-63154534 | Msa0132170:intron | 35.0% | |
| ! | TATTTAATCAATGGTGGGGT+CGG | - | chr1_3:63154784-63154803 | Msa0132170:intron | 35.0% |
| TGGTTAAACTTTCCCATGAT+GGG | - | chr1_3:63154903-63154922 | Msa0132170:intron | 35.0% | |
| GAAAAGTTCTTTCCCATCAT+GGG | + | chr1_3:63154918-63154937 | None:intergenic | 35.0% | |
| TGAAAAGTTCTTTCCCATCA+TGG | + | chr1_3:63154919-63154938 | None:intergenic | 35.0% | |
| GGATAGATAAGAGCAATAGA+GGG | + | chr1_3:63154960-63154979 | None:intergenic | 35.0% | |
| TGGATAGATAAGAGCAATAG+AGG | + | chr1_3:63154961-63154980 | None:intergenic | 35.0% | |
| ATCCATTTCTCACATCTATG+TGG | + | chr1_3:63155040-63155059 | None:intergenic | 35.0% | |
| GAGCTTTCTCAATACCAAAT+AGG | - | chr1_3:63155074-63155093 | Msa0132170:intron | 35.0% | |
| !!! | TGAGTTTGTTTTGCCCTATT+TGG | + | chr1_3:63155091-63155110 | None:intergenic | 35.0% |
| GCTGTACAATCCATTTAGAT+TGG | - | chr1_3:63155181-63155200 | Msa0132170:intron | 35.0% | |
| !! | ATCCATTTAGATTGGGTTGA+TGG | - | chr1_3:63155189-63155208 | Msa0132170:intron | 35.0% |
| !!! | GGTGTTGACTTAGAATTTTG+GGG | - | chr1_3:63155210-63155229 | Msa0132170:intron | 35.0% |
| CAACTAAGTAACAAGATGAG+TGG | + | chr1_3:63155878-63155897 | None:intergenic | 35.0% | |
| TAGCTACTAAATACCCACAT+CGG | - | chr1_3:63155937-63155956 | Msa0132170:intron | 35.0% | |
| AAGTGATCAAATTGAGGCAA+AGG | - | chr1_3:63155999-63156018 | Msa0132170:intron | 35.0% | |
| TTGTGCTATCAAATGCATGT+AGG | - | chr1_3:63156036-63156055 | Msa0132170:intron | 35.0% | |
| !! | TATATCTTGCCGGTTCATAT+AGG | + | chr1_3:63156188-63156207 | None:intergenic | 35.0% |
| !! | ACTTTTTAACTAGTGTCTCG+AGG | + | chr1_3:63156234-63156253 | None:intergenic | 35.0% |
| AGAAAATTCGCGTTGAAAAG+TGG | + | chr1_3:63156329-63156348 | None:intergenic | 35.0% | |
| CATGATCAACGCTTTCTTAT+AGG | - | chr1_3:63156821-63156840 | Msa0132170:intron | 35.0% | |
| !! | CTTTCTTATAGGACTAGTTG+TGG | - | chr1_3:63156832-63156851 | Msa0132170:intron | 35.0% |
| !! | TTCTTATAGGACTAGTTGTG+GGG | - | chr1_3:63156834-63156853 | Msa0132170:intron | 35.0% |
| AGAATTGTTCACTCAACATG+TGG | + | chr1_3:63157025-63157044 | None:intergenic | 35.0% | |
| ACAATTCTTAGGCCAACATA+CGG | - | chr1_3:63157037-63157056 | Msa0132170:intron | 35.0% | |
| ATTAGGACGTCACAGTTATT+TGG | + | chr1_3:63157108-63157127 | None:intergenic | 35.0% | |
| TTTCTCATTGAAGATGTTGG+GGG | - | chr1_3:63157131-63157150 | Msa0132170:intron | 35.0% | |
| CATGCAGGAAAGGAATTATT+AGG | - | chr1_3:63157297-63157316 | Msa0132170:intron | 35.0% | |
| ATGCAAGGACAAATTAAGGT+CGG | + | chr1_3:63157390-63157409 | None:intergenic | 35.0% | |
| ! | TTTAGTAACTTTGGCCTTCA+CGG | - | chr1_3:63157584-63157603 | Msa0132170:intron | 35.0% |
| AAGTCGTCCAAAATCACTTA+TGG | + | chr1_3:63157636-63157655 | None:intergenic | 35.0% | |
| CCCACTTATTGCCTTATAAT+TGG | - | chr1_3:63157892-63157911 | Msa0132170:intron | 35.0% | |
| ATTTGGAGGATAAAACAGAG+TGG | - | chr1_3:63158000-63158019 | Msa0132170:intron | 35.0% | |
| GAACAAGAACAAGCAAAAGA+AGG | + | chr1_3:63158288-63158307 | None:intergenic | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr1_3:63158466-63158485 | Msa0132170:intron | 35.0% | |
| CTAACTCATCCTTACAAAAC+CGG | - | chr1_3:63158466-63158485 | Msa0132170:intron | 35.0% | |
| ! | AGTTGGTGTTTGTGAGTATT+TGG | - | chr1_3:63158711-63158730 | Msa0132170:intron | 35.0% |
| TTGTGAGTATTTGGAAACTG+AGG | - | chr1_3:63158720-63158739 | Msa0132170:intron | 35.0% | |
| CATCATCATCATCATCATCA+GGG | + | chr1_3:63158878-63158897 | None:intergenic | 35.0% | |
| TCATCATCATCATCATCATC+AGG | + | chr1_3:63158879-63158898 | None:intergenic | 35.0% | |
| ! | TGATGATGATGATGATGATG+AGG | - | chr1_3:63158878-63158897 | Msa0132170:intron | 35.0% |
| TCATTGTCTGAATCAGTTTC+AGG | + | chr1_3:63158912-63158931 | None:intergenic | 35.0% | |
| ! | GAAACTGATTCAGACAATGA+AGG | - | chr1_3:63158912-63158931 | Msa0132170:intron | 35.0% |
| ATAGTCTTCTGCTAATGACA+CGG | + | chr1_3:63158998-63159017 | None:intergenic | 35.0% | |
| TGTGTGATGAATGATGATTC+TGG | - | chr1_3:63159119-63159138 | Msa0132170:intron | 35.0% | |
| !! | ATGATGATTCTGGTTCAGTT+TGG | - | chr1_3:63159129-63159148 | Msa0132170:intron | 35.0% |
| AATGATGTATCACCATCCAA+CGG | + | chr1_3:63159342-63159361 | None:intergenic | 35.0% | |
| ! | GGGAATCCACAAATTTTGAA+TGG | + | chr1_3:63159416-63159435 | None:intergenic | 35.0% |
| TTTAGTGTGAAACTTACCCA+AGG | + | chr1_3:63159829-63159848 | None:intergenic | 35.0% | |
| TTCTTCAATCCCTTTCCTCA+TGG | - | chr1_3:63150486-63150505 | Msa0132170:three_prime_UTR | 40.0% | |
| TCAAGTGTACTTGCAAGCAA+CGG | - | chr1_3:63150628-63150647 | Msa0132170:three_prime_UTR | 40.0% | |
| CTGACGAAGGAACATATATC+TGG | - | chr1_3:63150660-63150679 | Msa0132170:three_prime_UTR | 40.0% | |
| GACCCTCAAATATTGAGAGA+AGG | + | chr1_3:63151002-63151021 | None:intergenic | 40.0% | |
| ! | AGTCTGGCAGTATCCTTTTA+GGG | + | chr1_3:63151865-63151884 | None:intergenic | 40.0% |
| ! | AAGTCTGGCAGTATCCTTTT+AGG | + | chr1_3:63151866-63151885 | None:intergenic | 40.0% |
| AAGTGTGATCTCTCTTAAGG+AGG | - | chr1_3:63153533-63153552 | Msa0132170:intron | 40.0% | |
| ! | TCATCTGAGTGAAGGTATAC+TGG | + | chr1_3:63154096-63154115 | None:intergenic | 40.0% |
| AGTACTGTGACTTTGAGTCT+AGG | - | chr1_3:63154234-63154253 | Msa0132170:intron | 40.0% | |
| GTACTGTGACTTTGAGTCTA+GGG | - | chr1_3:63154235-63154254 | Msa0132170:intron | 40.0% | |
| AATTGTAACTTACGGTGACG+AGG | - | chr1_3:63154395-63154414 | Msa0132170:intron | 40.0% | |
| CTCTTGATCATCAAGATCCA+TGG | + | chr1_3:63154535-63154554 | None:intergenic | 40.0% | |
| ! | TGGATCTTGATGATCAAGAG+TGG | - | chr1_3:63154535-63154554 | Msa0132170:intron | 40.0% |
| TGAAGAGATGGTGAGAAAGA+TGG | - | chr1_3:63154684-63154703 | Msa0132170:intron | 40.0% | |
| GTGGTTAAACTTTCCCATGA+TGG | - | chr1_3:63154902-63154921 | Msa0132170:intron | 40.0% | |
| CACATCTTTAATGTCGGTGA+TGG | + | chr1_3:63154981-63155000 | None:intergenic | 40.0% | |
| CACCATCAACCCAATCTAAA+TGG | + | chr1_3:63155194-63155213 | None:intergenic | 40.0% | |
| TCATTATCTTCAACTAGGGG+CGG | - | chr1_3:63155634-63155653 | Msa0132170:intron | 40.0% | |
| CATTTGATGCACAACGTGAA+TGG | + | chr1_3:63156062-63156081 | None:intergenic | 40.0% | |
| TTCTCATTGAAGATGTTGGG+GGG | - | chr1_3:63157132-63157151 | Msa0132170:intron | 40.0% | |
| GAAAAGTGGCATAAAGCAAC+AGG | - | chr1_3:63157265-63157284 | Msa0132170:intron | 40.0% | |
| ATTCCTTTCCTGCATGTGAT+TGG | + | chr1_3:63157293-63157312 | None:intergenic | 40.0% | |
| TAATGATGTCATATGGGGCT+GGG | + | chr1_3:63157452-63157471 | None:intergenic | 40.0% | |
| ATAATGATGTCATATGGGGC+TGG | + | chr1_3:63157453-63157472 | None:intergenic | 40.0% | |
| ! | CTGTGAGCCATAAGTGATTT+TGG | - | chr1_3:63157626-63157645 | Msa0132170:intron | 40.0% |
| TTTCTTTGTTCAGCCTTGCA+TGG | - | chr1_3:63158419-63158438 | Msa0132170:intron | 40.0% | |
| TTTGTAAGGATGAGTTAGGC+CGG | + | chr1_3:63158464-63158483 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr1_3:63158468-63158487 | None:intergenic | 40.0% |
| ! | TGTCTGAAATCAGAACAAGC+CGG | + | chr1_3:63158488-63158507 | None:intergenic | 40.0% |
| TTTCTTTGTTCAGCCTTGCA+TGG | - | chr1_3:63158419-63158438 | Msa0132170:intron | 40.0% | |
| TTTGTAAGGATGAGTTAGGC+CGG | + | chr1_3:63158464-63158483 | None:intergenic | 40.0% | |
| !! | CGGTTTTGTAAGGATGAGTT+AGG | + | chr1_3:63158468-63158487 | None:intergenic | 40.0% |
| !! | TCTTACAAGCCGGTTTTGTA+AGG | + | chr1_3:63158621-63158640 | None:intergenic | 40.0% |
| !! | TTACAAAACCGGCTTGTAAG+AGG | - | chr1_3:63158620-63158639 | Msa0132170:intron | 40.0% |
| ! | GAGCTGAAGTGTGTATTTTC+TGG | - | chr1_3:63158760-63158779 | Msa0132170:intron | 40.0% |
| !!! | GAAGTGTGTATTTTCTGGCT+TGG | - | chr1_3:63158765-63158784 | Msa0132170:intron | 40.0% |
| ATCATCATCATCATCAGGGT+CGG | + | chr1_3:63158874-63158893 | None:intergenic | 40.0% | |
| CATTCATCACACACAAGACA+TGG | + | chr1_3:63159112-63159131 | None:intergenic | 40.0% | |
| CAAGACTAGTATAATGCCGT+TGG | - | chr1_3:63159323-63159342 | Msa0132170:intron | 40.0% | |
| ACTAGTATAATGCCGTTGGA+TGG | - | chr1_3:63159327-63159346 | Msa0132170:intron | 40.0% | |
| GCTCTCAAAAGTCGAATATG+AGG | + | chr1_3:63159462-63159481 | None:intergenic | 40.0% | |
| ! | GGCAAAAGTCATTGACTGTA+AGG | - | chr1_3:63159580-63159599 | Msa0132170:intron | 40.0% |
| AACAAGAAGGAACTGAGGTT+AGG | - | chr1_3:63159615-63159634 | Msa0132170:intron | 40.0% | |
| CAGCAGAATTCAGATATGAG+AGG | + | chr1_3:63159691-63159710 | None:intergenic | 40.0% | |
| TTAGAGTATGTGTTGGGACA+TGG | - | chr1_3:63159723-63159742 | Msa0132170:intron | 40.0% | |
| CTGCTGATATCTATGTCCTT+GGG | - | chr1_3:63159810-63159829 | Msa0132170:intron | 40.0% | |
| AGAGGGACCAAAAGTGAAGA+TGG | + | chr1_3:63153053-63153072 | None:intergenic | 45.0% | |
| !! | GGAAAGAAGTATCCATTCCC+AGG | + | chr1_3:63153967-63153986 | None:intergenic | 45.0% |
| TGGATACTTCTTTCCCACCA+TGG | - | chr1_3:63153972-63153991 | Msa0132170:intron | 45.0% | |
| GGATACTTCTTTCCCACCAT+GGG | - | chr1_3:63153973-63153992 | Msa0132170:intron | 45.0% | |
| AAATGGACCTTTCCCATGGT+GGG | + | chr1_3:63153988-63154007 | None:intergenic | 45.0% | |
| ! | AGTCTAGGGCTACTGTTCTT+AGG | - | chr1_3:63154249-63154268 | Msa0132170:intron | 45.0% |
| TGGTGAGAAAGATGGAGAAG+TGG | - | chr1_3:63154692-63154711 | Msa0132170:intron | 45.0% | |
| TGAGAAAGATGGAGAAGTGG+AGG | - | chr1_3:63154695-63154714 | Msa0132170:intron | 45.0% | |
| AAAGATGGAGAAGTGGAGGA+GGG | - | chr1_3:63154699-63154718 | Msa0132170:intron | 45.0% | |
| TAGAGGGTGAGGTTTAGCAT+GGG | + | chr1_3:63154944-63154963 | None:intergenic | 45.0% | |
| ATAGAGGGTGAGGTTTAGCA+TGG | + | chr1_3:63154945-63154964 | None:intergenic | 45.0% | |
| GATAAGAGCAATAGAGGGTG+AGG | + | chr1_3:63154955-63154974 | None:intergenic | 45.0% | |
| CGCCACATAGATGTGAGAAA+TGG | - | chr1_3:63155035-63155054 | Msa0132170:intron | 45.0% | |
| TTGAGAAAGCTCAACACGAC+AGG | + | chr1_3:63155066-63155085 | None:intergenic | 45.0% | |
| CGGACCTGGACTTACAATAT+TGG | - | chr1_3:63155654-63155673 | Msa0132170:intron | 45.0% | |
| GTAACAAGATGAGTGGTCAG+TGG | + | chr1_3:63155871-63155890 | None:intergenic | 45.0% | |
| !! | TATGTTTGGTGTGGCCTACA+TGG | - | chr1_3:63156132-63156151 | Msa0132170:intron | 45.0% |
| !! | ATGTTTGGTGTGGCCTACAT+GGG | - | chr1_3:63156133-63156152 | Msa0132170:intron | 45.0% |
| TTCTGGCCCAAAACAGGTTT+AGG | + | chr1_3:63156748-63156767 | None:intergenic | 45.0% | |
| !! | AAACCTGTTTTGGGCCAGAA+TGG | - | chr1_3:63156748-63156767 | Msa0132170:intron | 45.0% |
| !! | AACCTGTTTTGGGCCAGAAT+GGG | - | chr1_3:63156749-63156768 | Msa0132170:intron | 45.0% |
| !! | TCAATGAAGGTACCCCATTC+TGG | + | chr1_3:63156765-63156784 | None:intergenic | 45.0% |
| GGGTACCTTCATTGAATGCT+GGG | - | chr1_3:63156770-63156789 | Msa0132170:intron | 45.0% | |
| GGTACCTTCATTGAATGCTG+GGG | - | chr1_3:63156771-63156790 | Msa0132170:intron | 45.0% | |
| ATCACACACATCACGACCAT+TGG | + | chr1_3:63156798-63156817 | None:intergenic | 45.0% | |
| TCTCATTGAAGATGTTGGGG+GGG | - | chr1_3:63157133-63157152 | Msa0132170:intron | 45.0% | |
| AACAGGAACCAATCACATGC+AGG | - | chr1_3:63157282-63157301 | Msa0132170:intron | 45.0% | |
| GAACCAATCACATGCAGGAA+AGG | - | chr1_3:63157287-63157306 | Msa0132170:intron | 45.0% | |
| AATGATGTCATATGGGGCTG+GGG | + | chr1_3:63157451-63157470 | None:intergenic | 45.0% | |
| TGAAACCAAAGACACCGTGA+AGG | + | chr1_3:63157601-63157620 | None:intergenic | 45.0% | |
| TTGACCCGTGATTATAGCCA+CGG | - | chr1_3:63157868-63157887 | Msa0132170:intron | 45.0% | |
| ! | GAGTACCTGTTGTTGCTTGT+TGG | + | chr1_3:63158399-63158418 | None:intergenic | 45.0% |
| !! | CAGAACAAGCCGGTTTTGTA+AGG | + | chr1_3:63158478-63158497 | None:intergenic | 45.0% |
| ! | GAGTACCTGTTGTTGCTTGT+TGG | + | chr1_3:63158399-63158418 | None:intergenic | 45.0% |
| ACACTCATCCTCTTACAAGC+CGG | + | chr1_3:63158631-63158650 | None:intergenic | 45.0% | |
| !! | GGGACTTGATTTGTGCAAGT+TGG | - | chr1_3:63158694-63158713 | Msa0132170:intron | 45.0% |
| CAACAATGGTCATGCGCAAA+TGG | - | chr1_3:63158811-63158830 | Msa0132170:intron | 45.0% | |
| TTTGGGTGTATTGTGCAGAG+TGG | - | chr1_3:63159179-63159198 | Msa0132170:intron | 45.0% | |
| TTGGGTGTATTGTGCAGAGT+GGG | - | chr1_3:63159180-63159199 | Msa0132170:intron | 45.0% | |
| TAGTCACCATCTGATTCAGC+CGG | + | chr1_3:63159247-63159266 | None:intergenic | 45.0% | |
| TGAACTGCAGAATTTCTCCC+AGG | - | chr1_3:63159549-63159568 | Msa0132170:intron | 45.0% | |
| CAGAATTTCTCCCAGGCTTA+AGG | - | chr1_3:63159556-63159575 | Msa0132170:intron | 45.0% | |
| AATTTCTCCCAGGCTTAAGG+AGG | - | chr1_3:63159559-63159578 | Msa0132170:intron | 45.0% | |
| ! | ACTTTTGCCTCCTTAAGCCT+GGG | + | chr1_3:63159569-63159588 | None:intergenic | 45.0% |
| TGTGTTGGGACATGGAATGT+TGG | - | chr1_3:63159731-63159750 | Msa0132170:intron | 45.0% | |
| GGACATAGATATCAGCAGGA+TGG | + | chr1_3:63159808-63159827 | None:intergenic | 45.0% | |
| CCAAGGACATAGATATCAGC+AGG | + | chr1_3:63159812-63159831 | None:intergenic | 45.0% | |
| CCTGCTGATATCTATGTCCT+TGG | - | chr1_3:63159809-63159828 | Msa0132170:intron | 45.0% | |
| !! | AAAAAAAAAGAATTATATAT+GGG | + | chr1_3:63151405-63151424 | None:intergenic | 5.0% |
| !! | AAAAAAAAAAGAATTATATA+TGG | + | chr1_3:63151406-63151425 | None:intergenic | 5.0% |
| !! | TATTTCATATAAATTATAAA+CGG | + | chr1_3:63151745-63151764 | None:intergenic | 5.0% |
| !!! | AAAAAAATCTAATTATTTTT+TGG | - | chr1_3:63153248-63153267 | Msa0132170:intron | 5.0% |
| !!! | TTTTAATATTTTAATGTAAT+AGG | + | chr1_3:63153589-63153608 | None:intergenic | 5.0% |
| GGGAGCCTCAACTTTATGAG+TGG | - | chr1_3:63152146-63152165 | Msa0132170:intron | 50.0% | |
| CAACCGTGGATGCTCTATTG+CGG | - | chr1_3:63153931-63153950 | Msa0132170:intron | 50.0% | |
| TATTGCGGTGGCATTTAGCC+TGG | - | chr1_3:63153946-63153965 | Msa0132170:intron | 50.0% | |
| ATTGCGGTGGCATTTAGCCT+GGG | - | chr1_3:63153947-63153966 | Msa0132170:intron | 50.0% | |
| CTTCTTTCCCACCATGGGAA+AGG | - | chr1_3:63153978-63153997 | Msa0132170:intron | 50.0% | |
| GAAATGGACCTTTCCCATGG+TGG | + | chr1_3:63153989-63154008 | None:intergenic | 50.0% | |
| TGGGAAATGGACCTTTCCCA+TGG | + | chr1_3:63153992-63154011 | None:intergenic | 50.0% | |
| ATGGGAAAGGTCCATTTCCC+AGG | - | chr1_3:63153991-63154010 | Msa0132170:intron | 50.0% | |
| AAAGGTCCATTTCCCAGGAC+AGG | - | chr1_3:63153996-63154015 | Msa0132170:intron | 50.0% | |
| GAAAGATGGAGAAGTGGAGG+AGG | - | chr1_3:63154698-63154717 | Msa0132170:intron | 50.0% | |
| GCTTGCAATGTAGCCGATGT+GGG | + | chr1_3:63155953-63155972 | None:intergenic | 50.0% | |
| AGCTTGCAATGTAGCCGATG+TGG | + | chr1_3:63155954-63155973 | None:intergenic | 50.0% | |
| !! | TGTTTGGTGTGGCCTACATG+GGG | - | chr1_3:63156134-63156153 | Msa0132170:intron | 50.0% |
| !! | ACCTGTTTTGGGCCAGAATG+GGG | - | chr1_3:63156750-63156769 | Msa0132170:intron | 50.0% |
| ! | GGGGTACCTTCATTGAATGC+TGG | - | chr1_3:63156769-63156788 | Msa0132170:intron | 50.0% |
| TGGTCCCCAGCATTCAATGA+AGG | + | chr1_3:63156778-63156797 | None:intergenic | 50.0% | |
| CATTGAATGCTGGGGACCAA+TGG | - | chr1_3:63156779-63156798 | Msa0132170:intron | 50.0% | |
| TGGTTGTGTGCACCGTATGT+TGG | + | chr1_3:63157052-63157071 | None:intergenic | 50.0% | |
| CTCATTGAAGATGTTGGGGG+GGG | - | chr1_3:63157134-63157153 | Msa0132170:intron | 50.0% | |
| TCATTGAAGATGTTGGGGGG+GGG | - | chr1_3:63157135-63157154 | Msa0132170:intron | 50.0% | |
| ! | TTTGGCCTTCACGGTGTCTT+TGG | - | chr1_3:63157593-63157612 | Msa0132170:intron | 50.0% |
| TGGGTCCGTGGCTATAATCA+CGG | + | chr1_3:63157876-63157895 | None:intergenic | 50.0% | |
| TAAGGCAATAAGTGGGTCCG+TGG | + | chr1_3:63157888-63157907 | None:intergenic | 50.0% | |
| CACAGCCAACAAGCAACAAC+AGG | - | chr1_3:63158391-63158410 | Msa0132170:intron | 50.0% | |
| CACAGCCAACAAGCAACAAC+AGG | - | chr1_3:63158391-63158410 | Msa0132170:intron | 50.0% | |
| TGGGTGTATTGTGCAGAGTG+GGG | - | chr1_3:63159181-63159200 | Msa0132170:intron | 50.0% | |
| ! | GACTTTTGCCTCCTTAAGCC+TGG | + | chr1_3:63159570-63159589 | None:intergenic | 50.0% |
| GTTGGGACATGGAATGTTGG+AGG | - | chr1_3:63159734-63159753 | Msa0132170:intron | 50.0% | |
| ACGGTTGCAACAGCTGACGA+AGG | - | chr1_3:63150647-63150666 | Msa0132170:three_prime_UTR | 55.0% | |
| ! | CCACCGCAATAGAGCATCCA+CGG | + | chr1_3:63153937-63153956 | None:intergenic | 55.0% |
| GGTGGCATTTAGCCTGGGAA+TGG | - | chr1_3:63153952-63153971 | Msa0132170:intron | 55.0% | |
| TTGAGACTGCCACCTGTCCT+GGG | + | chr1_3:63154011-63154030 | None:intergenic | 55.0% | |
| ! | TTTGAGACTGCCACCTGTCC+TGG | + | chr1_3:63154012-63154031 | None:intergenic | 55.0% |
| !! | GTTTGGTGTGGCCTACATGG+GGG | - | chr1_3:63156135-63156154 | Msa0132170:intron | 55.0% |
| TCTTGGACCATCCCCCATGT+AGG | + | chr1_3:63156149-63156168 | None:intergenic | 55.0% | |
| TACATGGGGGATGGTCCAAG+AGG | - | chr1_3:63156148-63156167 | Msa0132170:intron | 55.0% | |
| ACCCCATTCTGGCCCAAAAC+AGG | + | chr1_3:63156754-63156773 | None:intergenic | 55.0% | |
| CATTGAAGATGTTGGGGGGG+GGG | - | chr1_3:63157136-63157155 | Msa0132170:intron | 55.0% | |
| ATTGAAGATGTTGGGGGGGG+GGG | - | chr1_3:63157137-63157156 | Msa0132170:intron | 55.0% | |
| GGGTCCGTGGCTATAATCAC+GGG | + | chr1_3:63157875-63157894 | None:intergenic | 55.0% | |
| ATTGTGCAGAGTGGGGAAGC+CGG | - | chr1_3:63159188-63159207 | Msa0132170:intron | 55.0% | |
| TCCTGTCCCTAATCCGTGAC+CGG | + | chr1_3:63159210-63159229 | None:intergenic | 55.0% | |
| !! | ACGGATTAGGGACAGGAGAG+AGG | - | chr1_3:63159213-63159232 | Msa0132170:intron | 55.0% |
| CAGGAGAGAGGATGAAGCTC+CGG | - | chr1_3:63159225-63159244 | Msa0132170:intron | 55.0% | |
| GAAGCTCCGGCTGAATCAGA+TGG | - | chr1_3:63159238-63159257 | Msa0132170:intron | 55.0% | |
| CCGTGGATGCTCTATTGCGG+TGG | - | chr1_3:63153934-63153953 | Msa0132170:intron | 60.0% | |
| GGTCCATTTCCCAGGACAGG+TGG | - | chr1_3:63153999-63154018 | Msa0132170:intron | 60.0% | |
| CTGCCACCTGTCCTGGGAAA+TGG | + | chr1_3:63154005-63154024 | None:intergenic | 60.0% | |
| TCTTCAACTAGGGGCGGACC+TGG | - | chr1_3:63155640-63155659 | Msa0132170:intron | 60.0% | |
| TTGAAGATGTTGGGGGGGGG+GGG | - | chr1_3:63157138-63157157 | Msa0132170:intron | 60.0% | |
| ! | GGGAAGCCGGTCACGGATTA+GGG | - | chr1_3:63159201-63159220 | Msa0132170:intron | 60.0% |
| GGTGTGGCCTACATGGGGGA+TGG | - | chr1_3:63156139-63156158 | Msa0132170:intron | 65.0% | |
| TGAAGATGTTGGGGGGGGGG+GGG | - | chr1_3:63157139-63157158 | Msa0132170:intron | 65.0% | |
| CAGAGTGGGGAAGCCGGTCA+CGG | - | chr1_3:63159194-63159213 | Msa0132170:intron | 65.0% | |
| GGGGAAGCCGGTCACGGATT+AGG | - | chr1_3:63159200-63159219 | Msa0132170:intron | 65.0% | |
| !! | GCCGGTCACGGATTAGGGAC+AGG | - | chr1_3:63159206-63159225 | Msa0132170:intron | 65.0% |
| GAAGATGTTGGGGGGGGGGG+GGG | - | chr1_3:63157140-63157159 | Msa0132170:intron | 70.0% | |
| AAGATGTTGGGGGGGGGGGG+GGG | - | chr1_3:63157141-63157160 | Msa0132170:intron | 70.0% | |
| ! | GTTGGGGGGGGGGGGGGGTA+TGG | - | chr1_3:63157146-63157165 | Msa0132170:intron | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 63150478 | 63160097 | 63150478 | ID=Msa0132170;Name=Msa0132170 |
| chr1_3 | mRNA | 63150478 | 63160097 | 63150478 | ID=Msa0132170-mRNA-1;Parent=Msa0132170;Name=Msa0132170-mRNA-1;_AED=0.05;_eAED=0.05;_QI=210|1|1|1|0.83|0.71|7|262|156 |
| chr1_3 | exon | 63150478 | 63150848 | 63150478 | ID=Msa0132170-mRNA-1:exon:21137;Parent=Msa0132170-mRNA-1 |
| chr1_3 | exon | 63150944 | 63151016 | 63150944 | ID=Msa0132170-mRNA-1:exon:21136;Parent=Msa0132170-mRNA-1 |
| chr1_3 | exon | 63151316 | 63151378 | 63151316 | ID=Msa0132170-mRNA-1:exon:21135;Parent=Msa0132170-mRNA-1 |
| chr1_3 | exon | 63151642 | 63151774 | 63151642 | ID=Msa0132170-mRNA-1:exon:21134;Parent=Msa0132170-mRNA-1 |
| chr1_3 | exon | 63152023 | 63152070 | 63152023 | ID=Msa0132170-mRNA-1:exon:21133;Parent=Msa0132170-mRNA-1 |
| chr1_3 | exon | 63152163 | 63152213 | 63152163 | ID=Msa0132170-mRNA-1:exon:21132;Parent=Msa0132170-mRNA-1 |
| chr1_3 | exon | 63159894 | 63160097 | 63159894 | ID=Msa0132170-mRNA-1:exon:21131;Parent=Msa0132170-mRNA-1 |
| chr1_3 | five_prime_UTR | 63159894 | 63160097 | 63159894 | ID=Msa0132170-mRNA-1:five_prime_utr;Parent=Msa0132170-mRNA-1 |
| chr1_3 | five_prime_UTR | 63152208 | 63152213 | 63152208 | ID=Msa0132170-mRNA-1:five_prime_utr;Parent=Msa0132170-mRNA-1 |
| chr1_3 | CDS | 63152163 | 63152207 | 63152163 | ID=Msa0132170-mRNA-1:cds;Parent=Msa0132170-mRNA-1 |
| chr1_3 | CDS | 63152023 | 63152070 | 63152023 | ID=Msa0132170-mRNA-1:cds;Parent=Msa0132170-mRNA-1 |
| chr1_3 | CDS | 63151642 | 63151774 | 63151642 | ID=Msa0132170-mRNA-1:cds;Parent=Msa0132170-mRNA-1 |
| chr1_3 | CDS | 63151316 | 63151378 | 63151316 | ID=Msa0132170-mRNA-1:cds;Parent=Msa0132170-mRNA-1 |
| chr1_3 | CDS | 63150944 | 63151016 | 63150944 | ID=Msa0132170-mRNA-1:cds;Parent=Msa0132170-mRNA-1 |
| chr1_3 | CDS | 63150740 | 63150848 | 63150740 | ID=Msa0132170-mRNA-1:cds;Parent=Msa0132170-mRNA-1 |
| chr1_3 | three_prime_UTR | 63150478 | 63150739 | 63150478 | ID=Msa0132170-mRNA-1:three_prime_utr;Parent=Msa0132170-mRNA-1 |
| Gene Sequence |
| Protein sequence |
