Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127780 | sp|Q8H0Z6|IP5P3_ARATH | 51.509 | 497 | 152 | 8 | 1 | 408 | 165 | 661 | 1.83e-158 | 465 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127780 | A0A396JVQ1 | 82.591 | 494 | 9 | 4 | 1 | 417 | 139 | 632 | 0.0 | 795 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0007440 | Msa0127780 | 0.834672 | 2.617115e-56 | -8.615850e-47 |
| Msa0010490 | Msa0127780 | 0.834249 | 3.342790e-56 | -8.615850e-47 |
| Msa0010500 | Msa0127780 | 0.823978 | 1.035021e-53 | -8.615850e-47 |
| Msa0020390 | Msa0127780 | 0.801338 | 9.437267e-49 | -8.615850e-47 |
| Msa0021310 | Msa0127780 | 0.904321 | 1.387345e-79 | -8.615850e-47 |
| Msa0023480 | Msa0127780 | 0.803898 | 2.798219e-49 | -8.615850e-47 |
| Msa0033110 | Msa0127780 | 0.808313 | 3.292924e-50 | -8.615850e-47 |
| Msa0047160 | Msa0127780 | 0.801759 | 7.735981e-49 | -8.615850e-47 |
| Msa0071250 | Msa0127780 | 0.856153 | 3.899899e-62 | -8.615850e-47 |
| Msa0079110 | Msa0127780 | 0.815348 | 9.680519e-52 | -8.615850e-47 |
| Msa0087800 | Msa0127780 | 0.814716 | 1.337274e-51 | -8.615850e-47 |
| Msa0089820 | Msa0127780 | 0.829895 | 3.985732e-55 | -8.615850e-47 |
| Msa0090550 | Msa0127780 | 0.805498 | 1.297046e-49 | -8.615850e-47 |
| Msa0096030 | Msa0127780 | 0.802091 | 6.614170e-49 | -8.615850e-47 |
| Msa0104240 | Msa0127780 | 0.812054 | 5.142462e-51 | -8.615850e-47 |
| Msa0104800 | Msa0127780 | 0.833917 | 4.049769e-56 | -8.615850e-47 |
| Msa0106710 | Msa0127780 | 0.811710 | 6.109910e-51 | -8.615850e-47 |
| Msa0112770 | Msa0127780 | 0.807177 | 5.739938e-50 | -8.615850e-47 |
| Msa0126360 | Msa0127780 | 0.806448 | 8.185674e-50 | -8.615850e-47 |
| Msa0127780 | Msa0132170 | 0.802943 | 4.412989e-49 | -8.615850e-47 |
| Msa0127780 | Msa0138020 | 0.803026 | 4.241483e-49 | -8.615850e-47 |
| Msa0127780 | Msa0140500 | -0.807139 | 5.849570e-50 | -8.615850e-47 |
| Msa0127780 | Msa0148080 | 0.826296 | 2.932250e-54 | -8.615850e-47 |
| Msa0127780 | Msa0151180 | 0.808492 | 3.016176e-50 | -8.615850e-47 |
| Msa0127780 | Msa0156700 | 0.805474 | 1.312121e-49 | -8.615850e-47 |
| Msa0127780 | Msa0167980 | 0.825879 | 3.683988e-54 | -8.615850e-47 |
| Msa0127780 | Msa0175110 | 0.930129 | 2.565262e-93 | -8.615850e-47 |
| Msa0127780 | Msa0177210 | 0.808301 | 3.312323e-50 | -8.615850e-47 |
| Msa0127780 | Msa0178800 | 0.844470 | 7.411844e-59 | -8.615850e-47 |
| Msa0127780 | Msa0185510 | 0.815198 | 1.045228e-51 | -8.615850e-47 |
| Msa0127780 | Msa0189300 | 0.808180 | 3.514698e-50 | -8.615850e-47 |
| Msa0127780 | Msa0202410 | 0.800639 | 1.311425e-48 | -8.615850e-47 |
| Msa0127780 | Msa0204960 | 0.817006 | 4.124098e-52 | -8.615850e-47 |
| Msa0127780 | Msa0205010 | 0.830947 | 2.203320e-55 | -8.615850e-47 |
| Msa0127780 | Msa0206830 | 0.807715 | 4.413553e-50 | -8.615850e-47 |
| Msa0127780 | Msa0209500 | 0.809464 | 1.867717e-50 | -8.615850e-47 |
| Msa0127780 | Msa0217290 | 0.820612 | 6.257790e-53 | -8.615850e-47 |
| Msa0127780 | Msa0223340 | 0.805504 | 1.292714e-49 | -8.615850e-47 |
| Msa0127780 | Msa0231660 | 0.821613 | 3.678648e-53 | -8.615850e-47 |
| Msa0127780 | Msa0232360 | 0.804290 | 2.318750e-49 | -8.615850e-47 |
| Msa0127780 | Msa0241140 | 0.830663 | 2.586407e-55 | -8.615850e-47 |
| Msa0127780 | Msa0244980 | 0.803300 | 3.722514e-49 | -8.615850e-47 |
| Msa0127780 | Msa0256330 | 0.811112 | 8.240087e-51 | -8.615850e-47 |
| Msa0127780 | Msa0257500 | 0.817006 | 4.125442e-52 | -8.615850e-47 |
| Msa0127780 | Msa0270500 | 0.811540 | 6.652996e-51 | -8.615850e-47 |
| Msa0127780 | Msa0279240 | 0.811883 | 5.601261e-51 | -8.615850e-47 |
| Msa0127780 | Msa0281530 | 0.815645 | 8.315426e-52 | -8.615850e-47 |
| Msa0127780 | Msa0283420 | 0.808955 | 2.401635e-50 | -8.615850e-47 |
| Msa0127780 | Msa0295330 | 0.808649 | 2.791392e-50 | -8.615850e-47 |
| Msa0127780 | Msa0295460 | -0.825666 | 4.139734e-54 | -8.615850e-47 |
| Msa0127780 | Msa0305410 | 0.815215 | 1.036175e-51 | -8.615850e-47 |
| Msa0127780 | Msa0317970 | 0.809959 | 1.461855e-50 | -8.615850e-47 |
| Msa0127780 | Msa0318980 | 0.802524 | 5.386974e-49 | -8.615850e-47 |
| Msa0127780 | Msa0321690 | 0.817859 | 2.650323e-52 | -8.615850e-47 |
| Msa0127780 | Msa0339910 | 0.826226 | 3.046764e-54 | -8.615850e-47 |
| Msa0127780 | Msa0342010 | 0.808836 | 2.546656e-50 | -8.615850e-47 |
| Msa0127780 | Msa0357900 | 0.820550 | 6.463652e-53 | -8.615850e-47 |
| Msa0127780 | Msa0358860 | 0.838190 | 3.331400e-57 | -8.615850e-47 |
| Msa0127780 | Msa0363680 | 0.805273 | 1.445455e-49 | -8.615850e-47 |
| Msa0127780 | Msa0380100 | 0.844814 | 5.986284e-59 | -8.615850e-47 |
| Msa0127780 | Msa0385490 | 0.829819 | 4.158536e-55 | -8.615850e-47 |
| Msa0127780 | Msa0389910 | 0.800624 | 1.320765e-48 | -8.615850e-47 |
| Msa0127780 | Msa0397540 | 0.809322 | 2.003746e-50 | -8.615850e-47 |
| Msa0127780 | Msa0401560 | 0.818934 | 1.512465e-52 | -8.615850e-47 |
| Msa0127780 | Msa0412840 | 0.820188 | 7.825634e-53 | -8.615850e-47 |
| Msa0127780 | Msa0419720 | 0.804946 | 1.692211e-49 | -8.615850e-47 |
| Msa0127780 | Msa0432500 | 0.831631 | 1.495898e-55 | -8.615850e-47 |
| Msa0127780 | Msa0437400 | 0.815473 | 9.078662e-52 | -8.615850e-47 |
| Msa0127780 | Msa0450400 | -0.822299 | 2.552219e-53 | -8.615850e-47 |
| Msa0127780 | Msa0450480 | 0.810392 | 1.179353e-50 | -8.615850e-47 |
| Msa0127780 | Msa0457510 | 0.832450 | 9.388342e-56 | -8.615850e-47 |
| Msa0127780 | Msa0481030 | 0.832368 | 9.837152e-56 | -8.615850e-47 |
| Msa0127780 | Msa0481280 | 0.804900 | 1.730115e-49 | -8.615850e-47 |
| Msa0127780 | Msa0482940 | 0.816150 | 6.415106e-52 | -8.615850e-47 |
| Msa0127780 | Msa0491540 | 0.804088 | 2.554558e-49 | -8.615850e-47 |
| Msa0127780 | Msa0500470 | 0.813876 | 2.050383e-51 | -8.615850e-47 |
| Msa0127780 | Msa0510930 | 0.826821 | 2.198073e-54 | -8.615850e-47 |
| Msa0127780 | Msa0518170 | 0.817030 | 4.073365e-52 | -8.615850e-47 |
| Msa0127780 | Msa0521670 | 0.805389 | 1.366673e-49 | -8.615850e-47 |
| Msa0127780 | Msa0532960 | 0.811053 | 8.486065e-51 | -8.615850e-47 |
| Msa0127780 | Msa0534900 | 0.812580 | 3.947087e-51 | -8.615850e-47 |
| Msa0127780 | Msa0544840 | 0.801858 | 7.382950e-49 | -8.615850e-47 |
| Msa0127780 | Msa0545700 | 0.804368 | 2.234338e-49 | -8.615850e-47 |
| Msa0127780 | Msa0546570 | 0.812744 | 3.634045e-51 | -8.615850e-47 |
| Msa0127780 | Msa0549780 | 0.821056 | 4.945570e-53 | -8.615850e-47 |
| Msa0127780 | Msa0581280 | 0.823993 | 1.026759e-53 | -8.615850e-47 |
| Msa0127780 | Msa0600080 | 0.822863 | 1.886248e-53 | -8.615850e-47 |
| Msa0127780 | Msa0602370 | 0.827015 | 1.975117e-54 | -8.615850e-47 |
| Msa0127780 | Msa0610130 | 0.813798 | 2.132425e-51 | -8.615850e-47 |
| Msa0127780 | Msa0610180 | 0.824812 | 6.589034e-54 | -8.615850e-47 |
| Msa0127780 | Msa0631350 | 0.814493 | 1.497893e-51 | -8.615850e-47 |
| Msa0127780 | Msa0643320 | 0.841754 | 3.921181e-58 | -8.615850e-47 |
| Msa0127780 | Msa0657870 | 0.810098 | 1.364552e-50 | -8.615850e-47 |
| Msa0127780 | Msa0667740 | 0.804909 | 1.722966e-49 | -8.615850e-47 |
| Msa0127780 | Msa0672550 | 0.806176 | 9.341836e-50 | -8.615850e-47 |
| Msa0127780 | Msa0673270 | 0.804097 | 2.543682e-49 | -8.615850e-47 |
| Msa0127780 | Msa0682090 | 0.827217 | 1.766906e-54 | -8.615850e-47 |
| Msa0127780 | Msa0682140 | 0.828324 | 9.578298e-55 | -8.615850e-47 |
| Msa0127780 | Msa0683140 | 0.842437 | 2.587190e-58 | -8.615850e-47 |
| Msa0127780 | Msa0683600 | 0.865163 | 7.208162e-65 | -8.615850e-47 |
| Msa0127780 | Msa0691900 | 0.805298 | 1.428230e-49 | -8.615850e-47 |
| Msa0127780 | Msa0703910 | 0.829019 | 6.504929e-55 | -8.615850e-47 |
| Msa0127780 | Msa0705190 | 0.802644 | 5.086618e-49 | -8.615850e-47 |
| Msa0127780 | Msa0705990 | 0.823396 | 1.416446e-53 | -8.615850e-47 |
| Msa0127780 | Msa0707250 | 0.809177 | 2.152019e-50 | -8.615850e-47 |
| Msa0127780 | Msa0721280 | 0.826704 | 2.343551e-54 | -8.615850e-47 |
| Msa0127780 | Msa0741440 | 0.803435 | 3.491800e-49 | -8.615850e-47 |
| Msa0127780 | Msa0749440 | 0.814839 | 1.255652e-51 | -8.615850e-47 |
| Msa0127780 | Msa0750850 | 0.835596 | 1.530862e-56 | -8.615850e-47 |
| Msa0127780 | Msa0751850 | 0.807650 | 4.557088e-50 | -8.615850e-47 |
| Msa0127780 | Msa0754820 | 0.812677 | 3.759559e-51 | -8.615850e-47 |
| Msa0127780 | Msa0760180 | 0.803283 | 3.753523e-49 | -8.615850e-47 |
| Msa0127780 | Msa0760250 | 0.803558 | 3.291761e-49 | -8.615850e-47 |
| Msa0127780 | Msa0763890 | 0.820387 | 7.047748e-53 | -8.615850e-47 |
| Msa0127780 | Msa0763920 | 0.823779 | 1.152557e-53 | -8.615850e-47 |
| Msa0127780 | Msa0800370 | 0.816722 | 4.776056e-52 | -8.615850e-47 |
| Msa0127780 | Msa0801730 | 0.809770 | 1.605203e-50 | -8.615850e-47 |
| Msa0127780 | Msa0822500 | 0.822096 | 2.843212e-53 | -8.615850e-47 |
| Msa0127780 | Msa0826150 | 0.825515 | 4.494102e-54 | -8.615850e-47 |
| Msa0127780 | Msa0829220 | 0.807651 | 4.555684e-50 | -8.615850e-47 |
| Msa0127780 | Msa0831850 | 0.803403 | 3.544656e-49 | -8.615850e-47 |
| Msa0127780 | Msa0833190 | -0.801511 | 8.698015e-49 | -8.615850e-47 |
| Msa0127780 | Msa0844110 | 0.842180 | 3.026214e-58 | -8.615850e-47 |
| Msa0127780 | Msa0861470 | 0.825590 | 4.314064e-54 | -8.615850e-47 |
| Msa0127780 | Msa0861570 | 0.829719 | 4.398647e-55 | -8.615850e-47 |
| Msa0127780 | Msa0865030 | 0.813316 | 2.722765e-51 | -8.615850e-47 |
| Msa0127780 | Msa0887250 | 0.817466 | 3.250483e-52 | -8.615850e-47 |
| Msa0127780 | Msa0890550 | 0.816923 | 4.305853e-52 | -8.615850e-47 |
| Msa0127780 | Msa0892640 | 0.803639 | 3.167676e-49 | -8.615850e-47 |
| Msa0127780 | Msa0894710 | 0.843603 | 1.266271e-58 | -8.615850e-47 |
| Msa0127780 | Msa0897200 | 0.813992 | 1.932674e-51 | -8.615850e-47 |
| Msa0127780 | Msa0921420 | 0.813279 | 2.773892e-51 | -8.615850e-47 |
| Msa0127780 | Msa0923780 | 0.841430 | 4.775708e-58 | -8.615850e-47 |
| Msa0127780 | Msa0934140 | 0.811366 | 7.256883e-51 | -8.615850e-47 |
| Msa0127780 | Msa0944200 | 0.824930 | 6.179747e-54 | -8.615850e-47 |
| Msa0127780 | Msa0944610 | 0.813465 | 2.524685e-51 | -8.615850e-47 |
| Msa0127780 | Msa0949590 | 0.800579 | 1.348951e-48 | -8.615850e-47 |
| Msa0127780 | Msa0960390 | 0.817887 | 2.611786e-52 | -8.615850e-47 |
| Msa0127780 | Msa0962840 | 0.824101 | 9.683835e-54 | -8.615850e-47 |
| Msa0127780 | Msa0969370 | 0.834252 | 3.337831e-56 | -8.615850e-47 |
| Msa0127780 | Msa0969810 | 0.810680 | 1.021922e-50 | -8.615850e-47 |
| Msa0127780 | Msa0980880 | 0.805809 | 1.115840e-49 | -8.615850e-47 |
| Msa0127780 | Msa0987370 | 0.806797 | 6.907542e-50 | -8.615850e-47 |
| Msa0127780 | Msa0992580 | 0.803395 | 3.558527e-49 | -8.615850e-47 |
| Msa0127780 | Msa0992600 | 0.819329 | 1.229599e-52 | -8.615850e-47 |
| Msa0127780 | Msa0994370 | 0.814191 | 1.746960e-51 | -8.615850e-47 |
| Msa0127780 | Msa1025080 | 0.802987 | 4.321030e-49 | -8.615850e-47 |
| Msa0127780 | Msa1026940 | 0.805576 | 1.249035e-49 | -8.615850e-47 |
| Msa0127780 | Msa1034270 | 0.824025 | 1.009208e-53 | -8.615850e-47 |
| Msa0127780 | Msa1034290 | 0.827325 | 1.665344e-54 | -8.615850e-47 |
| Msa0127780 | Msa1063420 | 0.817460 | 3.260059e-52 | -8.615850e-47 |
| Msa0127780 | Msa1064250 | 0.841205 | 5.471002e-58 | -8.615850e-47 |
| Msa0127780 | Msa1071320 | 0.832515 | 9.047169e-56 | -8.615850e-47 |
| Msa0127780 | Msa1076960 | 0.801194 | 1.010367e-48 | -8.615850e-47 |
| Msa0127780 | Msa1080640 | 0.818229 | 2.185710e-52 | -8.615850e-47 |
| Msa0127780 | Msa1081790 | -0.809440 | 1.890526e-50 | -8.615850e-47 |
| Msa0127780 | Msa1089320 | 0.801928 | 7.142848e-49 | -8.615850e-47 |
| Msa0127780 | Msa1091940 | 0.804998 | 1.650481e-49 | -8.615850e-47 |
| Msa0127780 | Msa1109090 | 0.821120 | 4.781267e-53 | -8.615850e-47 |
| Msa0127780 | Msa1111870 | 0.825036 | 5.833068e-54 | -8.615850e-47 |
| Msa0127780 | Msa1126450 | 0.804461 | 2.136736e-49 | -8.615850e-47 |
| Msa0127780 | Msa1133230 | 0.819005 | 1.457428e-52 | -8.615850e-47 |
| Msa0127780 | Msa1133250 | 0.814460 | 1.523392e-51 | -8.615850e-47 |
| Msa0127780 | Msa1144040 | 0.809357 | 1.969788e-50 | -8.615850e-47 |
| Msa0127780 | Msa1148980 | 0.801433 | 9.025973e-49 | -8.615850e-47 |
| Msa0127780 | Msa1152920 | 0.811562 | 6.580611e-51 | -8.615850e-47 |
| Msa0127780 | Msa1163540 | 0.818975 | 1.480633e-52 | -8.615850e-47 |
| Msa0127780 | Msa1166090 | -0.800870 | 1.176809e-48 | -8.615850e-47 |
| Msa0127780 | Msa1175200 | 0.800785 | 1.224431e-48 | -8.615850e-47 |
| Msa0127780 | Msa1176710 | 0.823700 | 1.202583e-53 | -8.615850e-47 |
| Msa0127780 | Msa1176720 | 0.806021 | 1.006899e-49 | -8.615850e-47 |
| Msa0127780 | Msa1178060 | 0.801492 | 8.775910e-49 | -8.615850e-47 |
| Msa0127780 | Msa1181250 | 0.814609 | 1.411750e-51 | -8.615850e-47 |
| Msa0127780 | Msa1181330 | 0.813627 | 2.326193e-51 | -8.615850e-47 |
| Msa0127780 | Msa1206310 | 0.820322 | 7.294174e-53 | -8.615850e-47 |
| Msa0127780 | Msa1206360 | 0.830292 | 3.188833e-55 | -8.615850e-47 |
| Msa0127780 | Msa1206850 | 0.801257 | 9.806818e-49 | -8.615850e-47 |
| Msa0127780 | Msa1207310 | 0.806237 | 9.066415e-50 | -8.615850e-47 |
| Msa0127780 | Msa1209200 | 0.811738 | 6.026179e-51 | -8.615850e-47 |
| Msa0127780 | Msa1210110 | 0.804262 | 2.351001e-49 | -8.615850e-47 |
| Msa0127780 | Msa1231840 | 0.818604 | 1.797017e-52 | -8.615850e-47 |
| Msa0127780 | Msa1254730 | 0.816343 | 5.808472e-52 | -8.615850e-47 |
| Msa0127780 | Msa1265630 | 0.803358 | 3.621354e-49 | -8.615850e-47 |
| Msa0127780 | Msa1270660 | 0.816866 | 4.434284e-52 | -8.615850e-47 |
| Msa0127780 | Msa1274560 | 0.800376 | 1.483406e-48 | -8.615850e-47 |
| Msa0127780 | Msa1278900 | 0.802224 | 6.208839e-49 | -8.615850e-47 |
| Msa0127780 | Msa1294820 | 0.804544 | 2.053111e-49 | -8.615850e-47 |
| Msa0127780 | Msa1295330 | 0.806512 | 7.935186e-50 | -8.615850e-47 |
| Msa0127780 | Msa1307180 | 0.836095 | 1.143821e-56 | -8.615850e-47 |
| Msa0127780 | Msa1316360 | 0.842987 | 1.848268e-58 | -8.615850e-47 |
| Msa0127780 | Msa1316640 | 0.810021 | 1.418080e-50 | -8.615850e-47 |
| Msa0127780 | Msa1332050 | 0.811096 | 8.304358e-51 | -8.615850e-47 |
| Msa0127780 | Msa1336560 | 0.816505 | 5.342616e-52 | -8.615850e-47 |
| Msa0127780 | Msa1346840 | 0.836366 | 9.762112e-57 | -8.615850e-47 |
| Msa0127780 | Msa1351540 | 0.822093 | 2.848558e-53 | -8.615850e-47 |
| Msa0127780 | Msa1355890 | 0.816059 | 6.720048e-52 | -8.615850e-47 |
| Msa0127780 | Msa1357890 | 0.827468 | 1.538509e-54 | -8.615850e-47 |
| Msa0127780 | Msa1358670 | 0.801269 | 9.750515e-49 | -8.615850e-47 |
| Msa0127780 | Msa1360980 | 0.802967 | 4.363998e-49 | -8.615850e-47 |
| Msa0127780 | Msa1364210 | 0.802809 | 4.704772e-49 | -8.615850e-47 |
| Msa0127780 | Msa1370590 | 0.813977 | 1.947526e-51 | -8.615850e-47 |
| Msa0127780 | Msa1371940 | 0.814391 | 1.577575e-51 | -8.615850e-47 |
| Msa0127780 | Msa1381480 | 0.818499 | 1.898456e-52 | -8.615850e-47 |
| Msa0127780 | Msa1384100 | 0.812330 | 4.475518e-51 | -8.615850e-47 |
| Msa0127780 | Msa1395730 | 0.801990 | 6.935221e-49 | -8.615850e-47 |
| Msa0127780 | Msa1398090 | 0.822354 | 2.477515e-53 | -8.615850e-47 |
| Msa0127780 | Msa1403340 | 0.818937 | 1.510254e-52 | -8.615850e-47 |
| Msa0127780 | Msa1407190 | 0.821704 | 3.504773e-53 | -8.615850e-47 |
| Msa0127780 | Msa1412130 | 0.823790 | 1.145668e-53 | -8.615850e-47 |
| Msa0127780 | Msa1416370 | 0.819555 | 1.092430e-52 | -8.615850e-47 |
| Msa0127780 | Msa1420270 | 0.803057 | 4.179425e-49 | -8.615850e-47 |
| Msa0127780 | Msa1422810 | 0.839829 | 1.253774e-57 | -8.615850e-47 |
| Msa0127780 | Msa1425260 | 0.821659 | 3.590039e-53 | -8.615850e-47 |
| Msa0127780 | Msa1428780 | 0.801198 | 1.008450e-48 | -8.615850e-47 |
| Msa0127780 | Msa1432130 | 0.812463 | 4.187509e-51 | -8.615850e-47 |
| Msa0127780 | Msa1437270 | 0.814618 | 1.405968e-51 | -8.615850e-47 |
| Msa0127780 | Msa1444120 | 0.810401 | 1.173829e-50 | -8.615850e-47 |
| Msa0127780 | Msa1445390 | -0.804669 | 1.933506e-49 | -8.615850e-47 |
| Msa0127780 | Msa1449340 | -0.813606 | 2.351402e-51 | -8.615850e-47 |
| Msa0127780 | Msa1454450 | 0.814544 | 1.459318e-51 | -8.615850e-47 |
| Msa0127780 | Msa1457160 | 0.818723 | 1.689475e-52 | -8.615850e-47 |
| Msa0127780 | Msa1463900 | 0.823481 | 1.353728e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127780 | MtrunA17_Chr1g0201271 | 82.591 | 494 | 9 | 4 | 1 | 417 | 139 | 632 | 0.0 | 795 |
| Msa0127780 | MtrunA17_Chr6g0466801 | 60.976 | 492 | 113 | 5 | 1 | 413 | 135 | 626 | 0.0 | 566 |
| Msa0127780 | MtrunA17_Chr4g0054951 | 40.481 | 457 | 211 | 8 | 1 | 404 | 113 | 561 | 2.32e-109 | 333 |
| Msa0127780 | MtrunA17_Chr4g0054941 | 40.000 | 455 | 212 | 8 | 1 | 401 | 111 | 558 | 1.26e-106 | 326 |
| Msa0127780 | MtrunA17_Chr5g0400311 | 38.889 | 486 | 211 | 10 | 1 | 407 | 143 | 621 | 1.75e-102 | 317 |
| Msa0127780 | MtrunA17_Chr1g0185281 | 37.665 | 454 | 213 | 8 | 1 | 414 | 129 | 552 | 1.51e-91 | 286 |
| Msa0127780 | MtrunA17_Chr7g0260081 | 38.322 | 441 | 214 | 13 | 1 | 407 | 129 | 545 | 1.05e-89 | 282 |
| Msa0127780 | MtrunA17_Chr5g0394901 | 50.958 | 261 | 106 | 4 | 168 | 407 | 351 | 610 | 1.23e-84 | 270 |
| Msa0127780 | MtrunA17_Chr1g0205121 | 48.120 | 266 | 116 | 4 | 169 | 413 | 313 | 577 | 6.81e-82 | 262 |
| Msa0127780 | MtrunA17_Chr8g0355021 | 50.847 | 236 | 94 | 3 | 171 | 384 | 227 | 462 | 9.51e-77 | 246 |
| Msa0127780 | MtrunA17_Chr7g0263111 | 48.971 | 243 | 97 | 5 | 174 | 397 | 174 | 408 | 1.48e-74 | 239 |
| Msa0127780 | MtrunA17_Chr1g0165011 | 50.000 | 232 | 95 | 2 | 174 | 384 | 180 | 411 | 2.21e-71 | 231 |
| Msa0127780 | MtrunA17_Chr8g0382571 | 44.656 | 262 | 123 | 4 | 168 | 407 | 210 | 471 | 4.12e-71 | 231 |
| Msa0127780 | MtrunA17_Chr6g0479511 | 46.522 | 230 | 104 | 2 | 174 | 384 | 155 | 384 | 7.15e-71 | 228 |
| Msa0127780 | MtrunA17_Chr8g0375751 | 45.833 | 264 | 120 | 3 | 167 | 410 | 142 | 402 | 3.67e-70 | 227 |
| Msa0127780 | MtrunA17_Chr6g0452181 | 45.679 | 243 | 107 | 5 | 167 | 384 | 159 | 401 | 6.56e-63 | 209 |
| Msa0127780 | MtrunA17_Chr1g0189231 | 30.457 | 197 | 108 | 6 | 169 | 340 | 606 | 798 | 2.65e-25 | 108 |
| Msa0127780 | MtrunA17_Chr6g0488541 | 27.468 | 233 | 105 | 5 | 170 | 340 | 642 | 872 | 6.50e-25 | 107 |
| Msa0127780 | MtrunA17_Chr1g0154491 | 32.812 | 192 | 100 | 10 | 207 | 376 | 143 | 327 | 4.03e-13 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0127780 | AT1G71710.2 | 51.509 | 497 | 152 | 8 | 1 | 408 | 156 | 652 | 1.45e-159 | 465 |
| Msa0127780 | AT1G71710.1 | 51.509 | 497 | 152 | 8 | 1 | 408 | 165 | 661 | 1.86e-159 | 465 |
| Msa0127780 | AT1G34120.1 | 50.320 | 469 | 142 | 8 | 1 | 402 | 138 | 582 | 1.38e-145 | 427 |
| Msa0127780 | AT1G34120.2 | 50.320 | 469 | 142 | 8 | 1 | 402 | 142 | 586 | 1.47e-145 | 427 |
| Msa0127780 | AT1G34120.3 | 50.107 | 469 | 142 | 9 | 1 | 402 | 142 | 585 | 5.61e-143 | 420 |
| Msa0127780 | AT1G34120.5 | 49.669 | 453 | 137 | 8 | 17 | 402 | 3 | 431 | 7.87e-140 | 407 |
| Msa0127780 | AT1G34120.4 | 48.619 | 362 | 111 | 6 | 1 | 311 | 138 | 475 | 9.43e-101 | 308 |
| Msa0127780 | AT3G63240.2 | 38.584 | 438 | 211 | 9 | 1 | 407 | 125 | 535 | 6.82e-92 | 288 |
| Msa0127780 | AT3G63240.1 | 38.584 | 438 | 211 | 9 | 1 | 407 | 125 | 535 | 6.82e-92 | 288 |
| Msa0127780 | AT4G18010.1 | 51.737 | 259 | 107 | 2 | 159 | 399 | 377 | 635 | 4.66e-91 | 288 |
| Msa0127780 | AT2G32010.2 | 37.879 | 462 | 225 | 10 | 1 | 407 | 128 | 582 | 5.73e-91 | 286 |
| Msa0127780 | AT2G32010.1 | 37.879 | 462 | 225 | 10 | 1 | 407 | 128 | 582 | 5.73e-91 | 286 |
| Msa0127780 | AT2G32010.4 | 37.879 | 462 | 225 | 10 | 1 | 407 | 128 | 582 | 5.73e-91 | 286 |
| Msa0127780 | AT2G32010.3 | 37.879 | 462 | 225 | 10 | 1 | 407 | 128 | 582 | 5.73e-91 | 286 |
| Msa0127780 | AT1G05470.2 | 49.231 | 260 | 110 | 4 | 169 | 407 | 347 | 605 | 7.02e-83 | 266 |
| Msa0127780 | AT1G05470.1 | 49.231 | 260 | 110 | 4 | 169 | 407 | 347 | 605 | 7.02e-83 | 266 |
| Msa0127780 | AT5G65090.2 | 46.415 | 265 | 121 | 3 | 158 | 401 | 186 | 450 | 4.10e-76 | 244 |
| Msa0127780 | AT5G65090.3 | 46.415 | 265 | 121 | 3 | 158 | 401 | 249 | 513 | 2.11e-75 | 244 |
| Msa0127780 | AT5G65090.1 | 46.415 | 265 | 121 | 3 | 158 | 401 | 249 | 513 | 2.11e-75 | 244 |
| Msa0127780 | AT2G37440.2 | 49.787 | 235 | 99 | 3 | 170 | 386 | 112 | 345 | 1.86e-74 | 238 |
| Msa0127780 | AT2G37440.1 | 49.787 | 235 | 99 | 3 | 170 | 386 | 193 | 426 | 6.89e-74 | 239 |
| Msa0127780 | AT2G37440.3 | 49.787 | 235 | 99 | 3 | 170 | 386 | 193 | 426 | 6.89e-74 | 239 |
| Msa0127780 | AT5G04980.4 | 45.312 | 256 | 118 | 3 | 159 | 392 | 145 | 400 | 1.49e-73 | 236 |
| Msa0127780 | AT5G04980.1 | 45.312 | 256 | 118 | 3 | 159 | 392 | 180 | 435 | 5.56e-73 | 235 |
| Msa0127780 | AT5G04980.3 | 45.312 | 256 | 118 | 3 | 159 | 392 | 180 | 435 | 5.56e-73 | 235 |
| Msa0127780 | AT5G04980.2 | 45.312 | 256 | 118 | 3 | 159 | 392 | 209 | 464 | 7.56e-73 | 236 |
| Msa0127780 | AT4G18010.2 | 54.787 | 188 | 84 | 1 | 159 | 345 | 377 | 564 | 6.68e-72 | 236 |
| Msa0127780 | AT2G01900.1 | 48.361 | 244 | 107 | 2 | 174 | 398 | 155 | 398 | 1.25e-71 | 231 |
| Msa0127780 | AT2G01900.3 | 48.361 | 244 | 107 | 2 | 174 | 398 | 163 | 406 | 1.79e-71 | 231 |
| Msa0127780 | AT2G01900.2 | 47.325 | 243 | 102 | 2 | 174 | 398 | 155 | 389 | 5.89e-69 | 224 |
| Msa0127780 | AT1G65580.2 | 29.412 | 272 | 132 | 9 | 169 | 382 | 351 | 620 | 4.33e-29 | 120 |
| Msa0127780 | AT1G65580.1 | 29.412 | 272 | 132 | 9 | 169 | 382 | 617 | 886 | 6.40e-29 | 120 |
| Msa0127780 | AT2G31830.2 | 27.425 | 299 | 141 | 9 | 168 | 406 | 658 | 940 | 4.02e-28 | 117 |
| Msa0127780 | AT2G31830.1 | 27.425 | 299 | 141 | 9 | 168 | 406 | 658 | 940 | 5.02e-28 | 117 |
| Msa0127780 | AT2G31830.3 | 29.630 | 243 | 124 | 7 | 168 | 367 | 658 | 896 | 3.82e-27 | 114 |
| Msa0127780 | AT2G43900.1 | 30.348 | 201 | 110 | 5 | 168 | 340 | 655 | 853 | 5.56e-27 | 114 |
| Msa0127780 | AT2G43900.2 | 30.348 | 201 | 110 | 5 | 168 | 340 | 655 | 853 | 5.76e-27 | 114 |
| Msa0127780 | AT1G05630.2 | 30.542 | 203 | 111 | 5 | 168 | 342 | 649 | 849 | 7.36e-27 | 114 |
| Msa0127780 | AT1G05630.3 | 30.542 | 203 | 111 | 5 | 168 | 342 | 649 | 849 | 9.51e-27 | 113 |
| Msa0127780 | AT1G05630.1 | 28.692 | 237 | 105 | 7 | 168 | 342 | 649 | 883 | 1.61e-22 | 100 |
| Msa0127780 | AT1G47510.4 | 35.625 | 160 | 87 | 6 | 191 | 347 | 70 | 216 | 2.99e-19 | 87.4 |
| Msa0127780 | AT1G47510.1 | 35.625 | 160 | 87 | 6 | 191 | 347 | 132 | 278 | 8.54e-19 | 87.4 |
Find 79 sgRNAs with CRISPR-Local
Find 164 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAATTAATCTCGTACTTAT+AGG | 0.195385 | 1_3:+57384392 | None:intergenic |
| AAAATGTTACTCGTGTTTAA+AGG | 0.232239 | 1_3:+57386509 | None:intergenic |
| AACTGTTGGTGTTGGTGTTA+TGG | 0.238835 | 1_3:-57385658 | Msa0127780:CDS |
| AGAATTTCTTCTTCTATATC+TGG | 0.254254 | 1_3:+57386344 | None:intergenic |
| TCATGATAAGAGCATATAAT+TGG | 0.254277 | 1_3:+57383421 | None:intergenic |
| AGTGCTCGCTGTAGCTTCTT+TGG | 0.278921 | 1_3:+57383963 | None:intergenic |
| ACTGTTGGTGTTGGTGTTAT+GGG | 0.280728 | 1_3:-57385657 | Msa0127780:CDS |
| TTTGATTTAATTTACAACTA+TGG | 0.282676 | 1_3:+57383477 | None:intergenic |
| TCTGATGGTTTAAACTTTGA+TGG | 0.282944 | 1_3:+57386374 | None:intergenic |
| TTATTTGCAGAAGAATAATT+TGG | 0.290513 | 1_3:-57384994 | Msa0127780:intron |
| AACAGATGCTATAGATTTAC+TGG | 0.299403 | 1_3:-57385823 | Msa0127780:CDS |
| CTCATGATCCAAGATACTTT+TGG | 0.312592 | 1_3:+57385304 | None:intergenic |
| ACCCGTGACTGCCACATATA+TGG | 0.328230 | 1_3:-57384006 | Msa0127780:CDS |
| TGGAATTTAGCAACATAATC+TGG | 0.339847 | 1_3:-57383885 | Msa0127780:exon |
| GGTGAGGAGATTCATCCTTT+AGG | 0.342847 | 1_3:-57386299 | Msa0127780:intron |
| TTAAAACCTAGTTGATAGAT+TGG | 0.348812 | 1_3:-57383566 | Msa0127780:three_prime_UTR |
| TGGACTTCCCAAAAGTATCT+TGG | 0.350599 | 1_3:-57385312 | Msa0127780:CDS |
| GTTGGTGTTATGGGCTATAT+TGG | 0.372990 | 1_3:-57385648 | Msa0127780:CDS |
| ATGTGGCAGTCACGGGTCTA+TGG | 0.397224 | 1_3:+57384012 | None:intergenic |
| ACACAGTCAATACTAGATAT+TGG | 0.403413 | 1_3:-57383687 | Msa0127780:three_prime_UTR |
| TCATGACAAGTTTCGGCACT+TGG | 0.403840 | 1_3:-57383905 | Msa0127780:CDS |
| TTAGAAAGCGATAGTGATAT+TGG | 0.406935 | 1_3:-57386320 | Msa0127780:CDS |
| GAAGAAGTCATGACAAGTTT+CGG | 0.412405 | 1_3:-57383912 | Msa0127780:CDS |
| TTGTAAATTAAATCAAATAT+AGG | 0.414138 | 1_3:-57383471 | Msa0127780:three_prime_UTR |
| CGTATTCTATCACATGGAAA+TGG | 0.418767 | 1_3:-57384080 | Msa0127780:CDS |
| CACATATATGGCAGAGGTTG+AGG | 0.419355 | 1_3:-57383994 | Msa0127780:CDS |
| GTTAGTGGGACTGAAAGAAT+TGG | 0.433816 | 1_3:-57385975 | Msa0127780:CDS |
| TTTGTTGCCTCAGAAAGTAT+TGG | 0.436972 | 1_3:-57385925 | Msa0127780:CDS |
| TACTCGTCCTGTACCGAAAT+GGG | 0.439941 | 1_3:-57386474 | Msa0127780:CDS |
| TGCAGAAGAATAATTTGGTT+CGG | 0.440082 | 1_3:-57384989 | Msa0127780:intron |
| ATATTATTTACTGAATTTGA+AGG | 0.445218 | 1_3:-57383744 | Msa0127780:three_prime_UTR |
| AACAAATGTAATGGTGGCTC+TGG | 0.447550 | 1_3:+57385942 | None:intergenic |
| CCACCTTACGGCAGGTGAAA+AGG | 0.453682 | 1_3:-57385411 | Msa0127780:CDS |
| ATACTCGTCCTGTACCGAAA+TGG | 0.454190 | 1_3:-57386475 | Msa0127780:CDS |
| AATTGGAAGAATTGTAATTG+AGG | 0.457576 | 1_3:+57383438 | None:intergenic |
| TGCCATATATGTGGCAGTCA+CGG | 0.462589 | 1_3:+57384004 | None:intergenic |
| ATCTTGAAGCTTTGATGAAG+AGG | 0.470630 | 1_3:-57385791 | Msa0127780:CDS |
| AGCATTTCGTTTGATTTCAT+CGG | 0.472148 | 1_3:+57385385 | None:intergenic |
| CTTTATATGCACCCACCTTA+CGG | 0.476641 | 1_3:-57385423 | Msa0127780:CDS |
| GGTTTAAACTTTGATGGAGA+TGG | 0.477628 | 1_3:+57386380 | None:intergenic |
| GACTGTATGATTTGTACATA+TGG | 0.478230 | 1_3:-57383606 | Msa0127780:three_prime_UTR |
| ATATCTGGTGCATCATCTGA+TGG | 0.479222 | 1_3:+57386359 | None:intergenic |
| GCCATATATGTGGCAGTCAC+GGG | 0.485409 | 1_3:+57384005 | None:intergenic |
| ATCTCGTACTTATAGGTTGG+TGG | 0.485679 | 1_3:+57384399 | None:intergenic |
| GATTAGTAAGCTATCTAGAA+TGG | 0.486586 | 1_3:-57385997 | Msa0127780:CDS |
| TTAACCGGTTTAAAAGAAGT+TGG | 0.498071 | 1_3:+57385897 | None:intergenic |
| CTGAAAGAATTGGTTTGAGC+TGG | 0.499133 | 1_3:-57385965 | Msa0127780:CDS |
| AACATGAAGGTTTCAACTGT+TGG | 0.500406 | 1_3:-57385672 | Msa0127780:CDS |
| TATCATATGGCAAACTGATA+CGG | 0.511494 | 1_3:+57384954 | None:intergenic |
| TGAGATTACTGAGTTACAAA+AGG | 0.512142 | 1_3:-57384055 | Msa0127780:CDS |
| AAGGTTTCAACTGTTGGTGT+TGG | 0.514208 | 1_3:-57385666 | Msa0127780:CDS |
| TTAATCTCGTACTTATAGGT+TGG | 0.517794 | 1_3:+57384396 | None:intergenic |
| TTCTGAGGCAACAAATGTAA+TGG | 0.523939 | 1_3:+57385933 | None:intergenic |
| TGTTCTGAATATGTTTCCGC+AGG | 0.543544 | 1_3:+57385691 | None:intergenic |
| TCATCACGGTATGGGTTCGA+AGG | 0.552651 | 1_3:-57385716 | Msa0127780:CDS |
| TTTAGCAACATAATCTGGAC+AGG | 0.552955 | 1_3:-57383880 | Msa0127780:exon |
| CTTGTGAAAGAATTAGAGAA+AGG | 0.553223 | 1_3:-57384459 | Msa0127780:CDS |
| TCTCGTACTTATAGGTTGGT+GGG | 0.555840 | 1_3:+57384400 | None:intergenic |
| TGGAGATGGAGGATCACTAA+AGG | 0.558217 | 1_3:+57386394 | None:intergenic |
| GAAACATATTCAGAACATGA+AGG | 0.559314 | 1_3:-57385685 | Msa0127780:CDS |
| CTCAACCTCTGCCATATATG+TGG | 0.563035 | 1_3:+57383995 | None:intergenic |
| AAGCTATCTAGAATGGTTAG+TGG | 0.565033 | 1_3:-57385990 | Msa0127780:CDS |
| ATATGCACCCACCTTACGGC+AGG | 0.566040 | 1_3:-57385419 | Msa0127780:CDS |
| TTAAACTTTGATGGAGATGG+AGG | 0.571133 | 1_3:+57386383 | None:intergenic |
| AGCTATCTAGAATGGTTAGT+GGG | 0.573263 | 1_3:-57385989 | Msa0127780:CDS |
| GGTCTCTCCAATACTTTCTG+AGG | 0.576164 | 1_3:+57385918 | None:intergenic |
| TGCGATCGTATTCTATCACA+TGG | 0.579104 | 1_3:-57384086 | Msa0127780:CDS |
| GACTGCCACATATATGGCAG+AGG | 0.590077 | 1_3:-57384000 | Msa0127780:CDS |
| ACAAAGCCAATCTATCAACT+AGG | 0.591192 | 1_3:+57383560 | None:intergenic |
| ATAGTGAGCAAGCAGATGGT+TGG | 0.609242 | 1_3:-57385744 | Msa0127780:CDS |
| AAGCGATAGTGATATTGGTG+AGG | 0.614723 | 1_3:-57386315 | Msa0127780:CDS |
| TATGGGCTATATTGGTAACA+AGG | 0.624421 | 1_3:-57385640 | Msa0127780:intron |
| TCATCACTTGAAAATTCACA+TGG | 0.627613 | 1_3:+57383513 | None:intergenic |
| TGAGGCAACAAATGTAATGG+TGG | 0.637973 | 1_3:+57385936 | None:intergenic |
| TTTAATTTACAACTATGGAG+TGG | 0.639270 | 1_3:+57383482 | None:intergenic |
| TATGGGTTCGAAGGAGCCTG+CGG | 0.674551 | 1_3:-57385707 | Msa0127780:CDS |
| GAAGATAGTGAGCAAGCAGA+TGG | 0.678985 | 1_3:-57385748 | Msa0127780:CDS |
| ATGTTCGTGAAATACATCAG+AGG | 0.682749 | 1_3:-57385361 | Msa0127780:CDS |
| AAAATTGGTTGAGAGAGACC+AGG | 0.701785 | 1_3:-57384897 | Msa0127780:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTGTAAATTAAATCAAATAT+AGG | - | chr1_3:57386483-57386502 | Msa0127780:CDS | 10.0% |
| !! | TAAATTAACATATTTGAATG+TGG | + | chr1_3:57384695-57384714 | None:intergenic | 15.0% |
| !!! | TTACCTTAATTTTAATCAAA+AGG | + | chr1_3:57384746-57384765 | None:intergenic | 15.0% |
| !! | TTCTAATTTAATCATATAGA+AGG | + | chr1_3:57384830-57384849 | None:intergenic | 15.0% |
| !! | TTATGAGTATGATAAAAAAA+TGG | + | chr1_3:57385713-57385732 | None:intergenic | 15.0% |
| !! | ATATTATTTACTGAATTTGA+AGG | - | chr1_3:57386210-57386229 | Msa0127780:intron | 15.0% |
| !!! | TTTGATTTAATTTACAACTA+TGG | + | chr1_3:57386480-57386499 | None:intergenic | 15.0% |
| !! | ATCAGAAAGTGAATAAAAAT+GGG | + | chr1_3:57384620-57384639 | None:intergenic | 20.0% |
| !! | AATCAGAAAGTGAATAAAAA+TGG | + | chr1_3:57384621-57384640 | None:intergenic | 20.0% |
| !!! | TTTTATTCACTTTCTGATTT+TGG | - | chr1_3:57384622-57384641 | Msa0127780:intron | 20.0% |
| !!! | ATGCCTTTTGATTAAAATTA+AGG | - | chr1_3:57384740-57384759 | Msa0127780:intron | 20.0% |
| !! | GATTAATTTACTTCAATAGA+AGG | + | chr1_3:57384853-57384872 | None:intergenic | 20.0% |
| !! | TTATTTGCAGAAGAATAATT+TGG | - | chr1_3:57384960-57384979 | Msa0127780:CDS | 20.0% |
| !! | TAATAGATAATCGTGTTTAA+GGG | - | chr1_3:57385374-57385393 | Msa0127780:CDS | 20.0% |
| !! | TCATGAAATCAAAATGAATA+AGG | + | chr1_3:57385424-57385443 | None:intergenic | 20.0% |
| !!! | ATAGATTTTGAACTCTTAAA+AGG | - | chr1_3:57385445-57385464 | Msa0127780:CDS | 20.0% |
| !!! | TAGATTTTGAACTCTTAAAA+GGG | - | chr1_3:57385446-57385465 | Msa0127780:CDS | 20.0% |
| !!! | TCATTTTACTAAGAACAATT+TGG | + | chr1_3:57385737-57385756 | None:intergenic | 20.0% |
| ! | AAAATGTTACTCGTGTTTAA+AGG | + | chr1_3:57383448-57383467 | None:intergenic | 25.0% |
| !! | CTAAAGGATTTTATCTTTGA+AGG | + | chr1_3:57383547-57383566 | None:intergenic | 25.0% |
| ! | AGAATTTCTTCTTCTATATC+TGG | + | chr1_3:57383613-57383632 | None:intergenic | 25.0% |
| ! | AAATTATGTTCTTCACCTAA+AGG | + | chr1_3:57383673-57383692 | None:intergenic | 25.0% |
| ! | GGTGAAGAACATAATTTATT+TGG | - | chr1_3:57383676-57383695 | Msa0127780:three_prime_UTR | 25.0% |
| ! | ATCAGTTATCTTATCAAAGA+AGG | - | chr1_3:57383788-57383807 | Msa0127780:intron | 25.0% |
| ! | CTTATCAAAGAAGGTTAAAT+AGG | - | chr1_3:57383797-57383816 | Msa0127780:intron | 25.0% |
| !! | AAGCTATCTAGAATGATTAA+TGG | - | chr1_3:57383886-57383905 | Msa0127780:exon | 25.0% |
| !! | AGCTATCTAGAATGATTAAT+GGG | - | chr1_3:57383887-57383906 | Msa0127780:exon | 25.0% |
| !! | GTCTTATTAAACGATTTAAC+CGG | + | chr1_3:57384075-57384094 | None:intergenic | 25.0% |
| !!! | TTTTGATTTGAAAGAATCAC+AGG | + | chr1_3:57384112-57384131 | None:intergenic | 25.0% |
| ! | AACAATGTCTTGAATTTACA+TGG | - | chr1_3:57384774-57384793 | Msa0127780:intron | 25.0% |
| !!! | AGATCTCTTGTTTTATCATA+TGG | + | chr1_3:57385016-57385035 | None:intergenic | 25.0% |
| !! | ATCTTATCTCAAAAAAGCAT+TGG | - | chr1_3:57385032-57385051 | Msa0127780:intron | 25.0% |
| !!! | AAAAAAGCATTGGTCAAAAT+TGG | - | chr1_3:57385042-57385061 | Msa0127780:intron | 25.0% |
| !!! | TATCAAGTTGATACATCTAA+TGG | + | chr1_3:57385095-57385114 | None:intergenic | 25.0% |
| !!! | TTATTGATGTCTTATTTCTG+AGG | - | chr1_3:57385165-57385184 | Msa0127780:intron | 25.0% |
| ! | ACGGAACATATATTTCTTAA+TGG | + | chr1_3:57385206-57385225 | None:intergenic | 25.0% |
| ! | CACGATTATCTATTACAAAA+TGG | + | chr1_3:57385369-57385388 | None:intergenic | 25.0% |
| ! | GTAATAGATAATCGTGTTTA+AGG | - | chr1_3:57385373-57385392 | Msa0127780:CDS | 25.0% |
| ! | TGAATTAATCTCGTACTTAT+AGG | + | chr1_3:57385565-57385584 | None:intergenic | 25.0% |
| ! | ATTAATTCAGACAAGTACAT+TGG | - | chr1_3:57385576-57385595 | Msa0127780:intron | 25.0% |
| ! | AATGTTTGCAATTACCTTAT+AGG | - | chr1_3:57385845-57385864 | Msa0127780:CDS | 25.0% |
| !! | ACATATGGTATTTTATGAAC+AGG | - | chr1_3:57386363-57386382 | Msa0127780:CDS | 25.0% |
| !!! | TTAAAACCTAGTTGATAGAT+TGG | - | chr1_3:57386388-57386407 | Msa0127780:CDS | 25.0% |
| !! | TTTAATTTACAACTATGGAG+TGG | + | chr1_3:57386475-57386494 | None:intergenic | 25.0% |
| ! | AATTGGAAGAATTGTAATTG+AGG | + | chr1_3:57386519-57386538 | None:intergenic | 25.0% |
| ! | CGAATTAAGTTTTCCCATTT+CGG | + | chr1_3:57383496-57383515 | None:intergenic | 30.0% |
| TCTGATGGTTTAAACTTTGA+TGG | + | chr1_3:57383583-57383602 | None:intergenic | 30.0% | |
| TTAGAAAGCGATAGTGATAT+TGG | - | chr1_3:57383634-57383653 | Msa0127780:three_prime_UTR | 30.0% | |
| ! | AGCACTGAATATTAGTTTGA+AGG | - | chr1_3:57383726-57383745 | Msa0127780:three_prime_UTR | 30.0% |
| GATTAGTAAGCTATCTAGAA+TGG | - | chr1_3:57383879-57383898 | Msa0127780:exon | 30.0% | |
| ! | TTAACCGGTTTAAAAGAAGT+TGG | + | chr1_3:57384060-57384079 | None:intergenic | 30.0% |
| AACAGATGCTATAGATTTAC+TGG | - | chr1_3:57384131-57384150 | Msa0127780:intron | 30.0% | |
| GAAACATATTCAGAACATGA+AGG | - | chr1_3:57384269-57384288 | Msa0127780:intron | 30.0% | |
| ! | AACTCTAGGGAAAATTTCAA+AGG | + | chr1_3:57384352-57384371 | None:intergenic | 30.0% |
| ACCAAAAACTACAAACTCTA+GGG | + | chr1_3:57384365-57384384 | None:intergenic | 30.0% | |
| ! | AGCATTTCGTTTGATTTCAT+CGG | + | chr1_3:57384572-57384591 | None:intergenic | 30.0% |
| ! | TCATGATCCAAGATACTTTT+GGG | + | chr1_3:57384652-57384671 | None:intergenic | 30.0% |
| AGGCATTAGCATATAATTCA+AGG | + | chr1_3:57384726-57384745 | None:intergenic | 30.0% | |
| TGCAGAAGAATAATTTGGTT+CGG | - | chr1_3:57384965-57384984 | Msa0127780:CDS | 30.0% | |
| TATCATATGGCAAACTGATA+CGG | + | chr1_3:57385003-57385022 | None:intergenic | 30.0% | |
| ! | AGTTGATACATCTAATGGAA+GGG | + | chr1_3:57385090-57385109 | None:intergenic | 30.0% |
| !! | AAGTTGATACATCTAATGGA+AGG | + | chr1_3:57385091-57385110 | None:intergenic | 30.0% |
| ATAATCGTGTTTAAGGGTTT+AGG | - | chr1_3:57385380-57385399 | Msa0127780:CDS | 30.0% | |
| TAATCGTGTTTAAGGGTTTA+GGG | - | chr1_3:57385381-57385400 | Msa0127780:CDS | 30.0% | |
| CTTGTGAAAGAATTAGAGAA+AGG | - | chr1_3:57385495-57385514 | Msa0127780:intron | 30.0% | |
| !!! | TTAGAGAAAGGTGTTTTTGA+TGG | - | chr1_3:57385507-57385526 | Msa0127780:intron | 30.0% |
| TTAATCTCGTACTTATAGGT+TGG | + | chr1_3:57385561-57385580 | None:intergenic | 30.0% | |
| TGAGATTACTGAGTTACAAA+AGG | - | chr1_3:57385899-57385918 | Msa0127780:intron | 30.0% | |
| TGGAATTTAGCAACATAATC+TGG | - | chr1_3:57386069-57386088 | Msa0127780:intron | 30.0% | |
| ! | TTTTCCGTAACCTTTACTTT+CGG | - | chr1_3:57386158-57386177 | Msa0127780:intron | 30.0% |
| ACACAGTCAATACTAGATAT+TGG | - | chr1_3:57386267-57386286 | Msa0127780:intron | 30.0% | |
| ! | GACTGTATGATTTGTACATA+TGG | - | chr1_3:57386348-57386367 | Msa0127780:CDS | 30.0% |
| TCATCACTTGAAAATTCACA+TGG | + | chr1_3:57386444-57386463 | None:intergenic | 30.0% | |
| TTAAACTTTGATGGAGATGG+AGG | + | chr1_3:57383574-57383593 | None:intergenic | 35.0% | |
| GGTTTAAACTTTGATGGAGA+TGG | + | chr1_3:57383577-57383596 | None:intergenic | 35.0% | |
| TTCAGTGCTTCATCTATGAT+TGG | + | chr1_3:57383715-57383734 | None:intergenic | 35.0% | |
| TGGGACTGAAAAAGATTCAT+CGG | - | chr1_3:57383906-57383925 | Msa0127780:CDS | 35.0% | |
| ! | AAGCTATCTAGAATGGTTAG+TGG | - | chr1_3:57383964-57383983 | Msa0127780:CDS | 35.0% |
| ! | AGCTATCTAGAATGGTTAGT+GGG | - | chr1_3:57383965-57383984 | Msa0127780:CDS | 35.0% |
| !! | TTCTGAGGCAACAAATGTAA+TGG | + | chr1_3:57384024-57384043 | None:intergenic | 35.0% |
| ! | TTTGTTGCCTCAGAAAGTAT+TGG | - | chr1_3:57384029-57384048 | Msa0127780:CDS | 35.0% |
| ! | GAGACCAACTTCTTTTAAAC+CGG | - | chr1_3:57384053-57384072 | Msa0127780:CDS | 35.0% |
| ! | ATCTTGAAGCTTTGATGAAG+AGG | - | chr1_3:57384163-57384182 | Msa0127780:intron | 35.0% |
| !! | GATGGTTGGTATTTTCATCA+CGG | - | chr1_3:57384224-57384243 | Msa0127780:intron | 35.0% |
| ! | TTGGTATTTTCATCACGGTA+TGG | - | chr1_3:57384229-57384248 | Msa0127780:intron | 35.0% |
| ! | TGGTATTTTCATCACGGTAT+GGG | - | chr1_3:57384230-57384249 | Msa0127780:intron | 35.0% |
| AACATGAAGGTTTCAACTGT+TGG | - | chr1_3:57384282-57384301 | Msa0127780:intron | 35.0% | |
| ! | TATGGGCTATATTGGTAACA+AGG | - | chr1_3:57384314-57384333 | Msa0127780:intron | 35.0% |
| ! | TCCCTAGAGTTTGTAGTTTT+TGG | - | chr1_3:57384361-57384380 | Msa0127780:intron | 35.0% |
| GACCAAAAACTACAAACTCT+AGG | + | chr1_3:57384366-57384385 | None:intergenic | 35.0% | |
| ATGTTCGTGAAATACATCAG+AGG | - | chr1_3:57384593-57384612 | Msa0127780:intron | 35.0% | |
| ! | CTCATGATCCAAGATACTTT+TGG | + | chr1_3:57384653-57384672 | None:intergenic | 35.0% |
| TGCTGAAATTCTGTATTCAC+TGG | - | chr1_3:57384896-57384915 | Msa0127780:intron | 35.0% | |
| ! | TAATGGAAGGGTATATTACC+TGG | + | chr1_3:57385078-57385097 | None:intergenic | 35.0% |
| TCGATGAATTTACTGAGTGA+CGG | + | chr1_3:57385225-57385244 | None:intergenic | 35.0% | |
| !!! | AGAAAGGTGTTTTTGATGGA+TGG | - | chr1_3:57385511-57385530 | Msa0127780:intron | 35.0% |
| CGTATTCTATCACATGGAAA+TGG | - | chr1_3:57385874-57385893 | Msa0127780:intron | 35.0% | |
| ! | TTCATTTTCGATCTCTGCAT+CGG | + | chr1_3:57386025-57386044 | None:intergenic | 35.0% |
| GAAGAAGTCATGACAAGTTT+CGG | - | chr1_3:57386042-57386061 | Msa0127780:intron | 35.0% | |
| TTTAGCAACATAATCTGGAC+AGG | - | chr1_3:57386074-57386093 | Msa0127780:intron | 35.0% | |
| ACAAAGCCAATCTATCAACT+AGG | + | chr1_3:57386397-57386416 | None:intergenic | 35.0% | |
| ! | AAGTTTTCCCATTTCGGTAC+AGG | + | chr1_3:57383490-57383509 | None:intergenic | 40.0% |
| ATATCTGGTGCATCATCTGA+TGG | + | chr1_3:57383598-57383617 | None:intergenic | 40.0% | |
| AAGCGATAGTGATATTGGTG+AGG | - | chr1_3:57383639-57383658 | Msa0127780:three_prime_UTR | 40.0% | |
| GTTAGTGGGACTGAAAGAAT+TGG | - | chr1_3:57383979-57383998 | Msa0127780:CDS | 40.0% | |
| !! | CTGAAAGAATTGGTTTGAGC+TGG | - | chr1_3:57383989-57384008 | Msa0127780:CDS | 40.0% |
| AACAAATGTAATGGTGGCTC+TGG | + | chr1_3:57384015-57384034 | None:intergenic | 40.0% | |
| TGAGGCAACAAATGTAATGG+TGG | + | chr1_3:57384021-57384040 | None:intergenic | 40.0% | |
| ! | TGTTCTGAATATGTTTCCGC+AGG | + | chr1_3:57384266-57384285 | None:intergenic | 40.0% |
| AAGGTTTCAACTGTTGGTGT+TGG | - | chr1_3:57384288-57384307 | Msa0127780:intron | 40.0% | |
| !! | AACTGTTGGTGTTGGTGTTA+TGG | - | chr1_3:57384296-57384315 | Msa0127780:intron | 40.0% |
| !! | ACTGTTGGTGTTGGTGTTAT+GGG | - | chr1_3:57384297-57384316 | Msa0127780:intron | 40.0% |
| !! | GTTGGTGTTATGGGCTATAT+TGG | - | chr1_3:57384306-57384325 | Msa0127780:intron | 40.0% |
| CTTTATATGCACCCACCTTA+CGG | - | chr1_3:57384531-57384550 | Msa0127780:intron | 40.0% | |
| !! | TGGACTTCCCAAAAGTATCT+TGG | - | chr1_3:57384642-57384661 | Msa0127780:intron | 40.0% |
| !! | CTGCAAATTCTGTTTCTGCT+TGG | - | chr1_3:57384872-57384891 | Msa0127780:intron | 40.0% |
| AAAATTGGTTGAGAGAGACC+AGG | - | chr1_3:57385057-57385076 | Msa0127780:intron | 40.0% | |
| !! | GTTTTTGATGGATGGTCAGA+AGG | - | chr1_3:57385519-57385538 | Msa0127780:intron | 40.0% |
| !! | TCTCGTACTTATAGGTTGGT+GGG | + | chr1_3:57385557-57385576 | None:intergenic | 40.0% |
| ! | ATCTCGTACTTATAGGTTGG+TGG | + | chr1_3:57385558-57385577 | None:intergenic | 40.0% |
| TTCAGACAAGTACATTGGAG+AGG | - | chr1_3:57385581-57385600 | Msa0127780:intron | 40.0% | |
| CAAACTAAAGCATACCATGC+TGG | + | chr1_3:57385630-57385649 | None:intergenic | 40.0% | |
| AGAATACGATCGCACCTATA+AGG | + | chr1_3:57385862-57385881 | None:intergenic | 40.0% | |
| TGCGATCGTATTCTATCACA+TGG | - | chr1_3:57385868-57385887 | Msa0127780:intron | 40.0% | |
| TGCACCGAAAGTAAAGGTTA+CGG | + | chr1_3:57386165-57386184 | None:intergenic | 40.0% | |
| ATATCCTGCACCGAAAGTAA+AGG | + | chr1_3:57386171-57386190 | None:intergenic | 40.0% | |
| ATACTCGTCCTGTACCGAAA+TGG | - | chr1_3:57383479-57383498 | Msa0127780:three_prime_UTR | 45.0% | |
| TACTCGTCCTGTACCGAAAT+GGG | - | chr1_3:57383480-57383499 | Msa0127780:three_prime_UTR | 45.0% | |
| TGGAGATGGAGGATCACTAA+AGG | + | chr1_3:57383563-57383582 | None:intergenic | 45.0% | |
| GGTGAGGAGATTCATCCTTT+AGG | - | chr1_3:57383655-57383674 | Msa0127780:three_prime_UTR | 45.0% | |
| TAGGCTAAATCATTTCCGCG+AGG | - | chr1_3:57383816-57383835 | Msa0127780:intron | 45.0% | |
| TTTCCGCGAGGAAGATTCAT+CGG | - | chr1_3:57383828-57383847 | Msa0127780:three_prime_UTR | 45.0% | |
| TTTCCGATGAATCTTCCTCG+CGG | + | chr1_3:57383834-57383853 | None:intergenic | 45.0% | |
| GGTCTCTCCAATACTTTCTG+AGG | + | chr1_3:57384039-57384058 | None:intergenic | 45.0% | |
| GAAGATAGTGAGCAAGCAGA+TGG | - | chr1_3:57384206-57384225 | Msa0127780:intron | 45.0% | |
| ATAGTGAGCAAGCAGATGGT+TGG | - | chr1_3:57384210-57384229 | Msa0127780:intron | 45.0% | |
| !! | TCCAGAGGAAGGTGTTAATG+CGG | + | chr1_3:57385130-57385149 | None:intergenic | 45.0% |
| ATGAATTGTGCTCCAGAGGA+AGG | + | chr1_3:57385141-57385160 | None:intergenic | 45.0% | |
| TCACATGAATTGTGCTCCAG+AGG | + | chr1_3:57385145-57385164 | None:intergenic | 45.0% | |
| TGCCATATATGTGGCAGTCA+CGG | + | chr1_3:57385953-57385972 | None:intergenic | 45.0% | |
| CTCAACCTCTGCCATATATG+TGG | + | chr1_3:57385962-57385981 | None:intergenic | 45.0% | |
| CACATATATGGCAGAGGTTG+AGG | - | chr1_3:57385960-57385979 | Msa0127780:CDS | 45.0% | |
| TCATGACAAGTTTCGGCACT+TGG | - | chr1_3:57386049-57386068 | Msa0127780:intron | 45.0% | |
| ! | GTAACCTTTACTTTCGGTGC+AGG | - | chr1_3:57386164-57386183 | Msa0127780:intron | 45.0% |
| !!! | TTATTTTATTTATATTTTTC+AGG | - | chr1_3:57384465-57384484 | Msa0127780:intron | 5.0% |
| !!! | TATTTTATTTATATTTTTCA+GGG | - | chr1_3:57384466-57384485 | Msa0127780:intron | 5.0% |
| TCATCACGGTATGGGTTCGA+AGG | - | chr1_3:57384238-57384257 | Msa0127780:intron | 50.0% | |
| ! | CTTTTCACCTGCCGTAAGGT+GGG | + | chr1_3:57384545-57384564 | None:intergenic | 50.0% |
| ! | CTTCCTTTTCACCTGCCGTA+AGG | + | chr1_3:57384549-57384568 | None:intergenic | 50.0% |
| ACCGCATTAACACCTTCCTC+TGG | - | chr1_3:57385126-57385145 | Msa0127780:intron | 50.0% | |
| GTACATTGGAGAGGACCCAA+AGG | - | chr1_3:57385590-57385609 | Msa0127780:intron | 50.0% | |
| ACCCGTGACTGCCACATATA+TGG | - | chr1_3:57385948-57385967 | Msa0127780:CDS | 50.0% | |
| GCCATATATGTGGCAGTCAC+GGG | + | chr1_3:57385952-57385971 | None:intergenic | 50.0% | |
| GACTGCCACATATATGGCAG+AGG | - | chr1_3:57385954-57385973 | Msa0127780:CDS | 50.0% | |
| AGTGCTCGCTGTAGCTTCTT+TGG | + | chr1_3:57385994-57386013 | None:intergenic | 50.0% | |
| TATGGGTTCGAAGGAGCCTG+CGG | - | chr1_3:57384247-57384266 | Msa0127780:intron | 55.0% | |
| ATATGCACCCACCTTACGGC+AGG | - | chr1_3:57384535-57384554 | Msa0127780:intron | 55.0% | |
| ! | CCTTTTCACCTGCCGTAAGG+TGG | + | chr1_3:57384546-57384565 | None:intergenic | 55.0% |
| CCACCTTACGGCAGGTGAAA+AGG | - | chr1_3:57384543-57384562 | Msa0127780:intron | 55.0% | |
| GTGTACGCCTCGCAACCTTT+GGG | + | chr1_3:57385608-57385627 | None:intergenic | 55.0% | |
| ATGTGGCAGTCACGGGTCTA+TGG | + | chr1_3:57385945-57385964 | None:intergenic | 55.0% | |
| GAGAGGACCCAAAGGTTGCG+AGG | - | chr1_3:57385598-57385617 | Msa0127780:intron | 60.0% | |
| GGTGTACGCCTCGCAACCTT+TGG | + | chr1_3:57385609-57385628 | None:intergenic | 60.0% | |
| TTGCGAGGCGTACACCAGCA+TGG | - | chr1_3:57385613-57385632 | Msa0127780:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_3 | gene | 57383430 | 57386546 | 57383430 | ID=Msa0127780;Name=Msa0127780 |
| chr1_3 | mRNA | 57383430 | 57386546 | 57383430 | ID=Msa0127780-mRNA-1;Parent=Msa0127780;Name=Msa0127780-mRNA-1;_AED=0.10;_eAED=0.10;_QI=0|0.57|0.37|1|0.42|0.25|8|430|417 |
| chr1_3 | exon | 57383430 | 57383793 | 57383430 | ID=Msa0127780-mRNA-1:exon:18237;Parent=Msa0127780-mRNA-1 |
| chr1_3 | exon | 57383824 | 57384109 | 57383824 | ID=Msa0127780-mRNA-1:exon:18236;Parent=Msa0127780-mRNA-1 |
| chr1_3 | exon | 57384387 | 57384481 | 57384387 | ID=Msa0127780-mRNA-1:exon:18235;Parent=Msa0127780-mRNA-1 |
| chr1_3 | exon | 57384898 | 57385006 | 57384898 | ID=Msa0127780-mRNA-1:exon:18234;Parent=Msa0127780-mRNA-1 |
| chr1_3 | exon | 57385305 | 57385489 | 57385305 | ID=Msa0127780-mRNA-1:exon:18233;Parent=Msa0127780-mRNA-1 |
| chr1_3 | exon | 57385641 | 57385883 | 57385641 | ID=Msa0127780-mRNA-1:exon:18232;Parent=Msa0127780-mRNA-1 |
| chr1_3 | exon | 57385902 | 57386056 | 57385902 | ID=Msa0127780-mRNA-1:exon:18231;Parent=Msa0127780-mRNA-1 |
| chr1_3 | exon | 57386300 | 57386546 | 57386300 | ID=Msa0127780-mRNA-1:exon:18230;Parent=Msa0127780-mRNA-1 |
| chr1_3 | CDS | 57386300 | 57386546 | 57386300 | ID=Msa0127780-mRNA-1:cds;Parent=Msa0127780-mRNA-1 |
| chr1_3 | CDS | 57385902 | 57386056 | 57385902 | ID=Msa0127780-mRNA-1:cds;Parent=Msa0127780-mRNA-1 |
| chr1_3 | CDS | 57385641 | 57385883 | 57385641 | ID=Msa0127780-mRNA-1:cds;Parent=Msa0127780-mRNA-1 |
| chr1_3 | CDS | 57385305 | 57385489 | 57385305 | ID=Msa0127780-mRNA-1:cds;Parent=Msa0127780-mRNA-1 |
| chr1_3 | CDS | 57384898 | 57385006 | 57384898 | ID=Msa0127780-mRNA-1:cds;Parent=Msa0127780-mRNA-1 |
| chr1_3 | CDS | 57384387 | 57384481 | 57384387 | ID=Msa0127780-mRNA-1:cds;Parent=Msa0127780-mRNA-1 |
| chr1_3 | CDS | 57383890 | 57384109 | 57383890 | ID=Msa0127780-mRNA-1:cds;Parent=Msa0127780-mRNA-1 |
| chr1_3 | three_prime_UTR | 57383824 | 57383889 | 57383824 | ID=Msa0127780-mRNA-1:three_prime_utr;Parent=Msa0127780-mRNA-1 |
| chr1_3 | three_prime_UTR | 57383430 | 57383793 | 57383430 | ID=Msa0127780-mRNA-1:three_prime_utr;Parent=Msa0127780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
