AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0175110

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175110 MtrunA17_Chr1g0201271 92.399 671 9 4 9 676 1 632 0.0 1253
Msa0175110 MtrunA17_Chr6g0466801 62.594 663 205 6 15 672 2 626 0.0 784
Msa0175110 MtrunA17_Chr4g0054951 39.417 652 300 16 15 663 2 561 1.63e-146 438
Msa0175110 MtrunA17_Chr4g0054941 38.381 667 275 14 19 660 3 558 1.22e-143 431
Msa0175110 MtrunA17_Chr5g0400311 40.030 672 331 19 15 666 2 621 1.61e-143 432
Msa0175110 MtrunA17_Chr1g0185281 50.890 281 132 3 399 673 272 552 9.57e-94 301
Msa0175110 MtrunA17_Chr1g0185281 30.481 187 106 4 26 208 13 179 4.87e-18 88.2
Msa0175110 MtrunA17_Chr5g0394901 55.172 261 110 4 412 666 351 610 1.83e-93 302
Msa0175110 MtrunA17_Chr5g0394901 41.509 106 62 0 103 208 76 181 1.20e-17 87.0
Msa0175110 MtrunA17_Chr7g0260081 51.119 268 125 3 413 674 286 553 5.14e-91 293
Msa0175110 MtrunA17_Chr7g0260081 33.696 184 103 4 26 208 14 179 3.44e-19 91.7
Msa0175110 MtrunA17_Chr1g0205121 52.256 266 120 4 413 672 313 577 1.76e-90 293
Msa0175110 MtrunA17_Chr1g0205121 40.566 106 63 0 103 208 74 179 5.45e-18 88.2
Msa0175110 MtrunA17_Chr8g0355021 55.085 236 99 3 415 643 227 462 6.20e-85 275
Msa0175110 MtrunA17_Chr8g0355021 41.111 90 53 0 101 190 42 131 3.47e-16 82.0
Msa0175110 MtrunA17_Chr7g0263111 52.263 243 104 5 418 656 174 408 4.74e-81 264
Msa0175110 MtrunA17_Chr7g0263111 32.961 179 102 4 26 203 11 172 6.46e-19 90.1
Msa0175110 MtrunA17_Chr8g0382571 48.473 262 128 4 412 666 210 471 2.30e-78 258
Msa0175110 MtrunA17_Chr8g0382571 54.167 72 33 0 119 190 37 108 2.07e-17 85.9
Msa0175110 MtrunA17_Chr6g0479511 50.000 230 111 2 418 643 155 384 1.44e-77 253
Msa0175110 MtrunA17_Chr6g0479511 44.086 93 49 2 122 213 47 137 8.29e-16 80.1
Msa0175110 MtrunA17_Chr1g0165011 52.586 232 104 2 418 643 180 411 4.36e-77 253
Msa0175110 MtrunA17_Chr1g0165011 38.136 118 62 4 79 191 24 135 2.75e-13 72.8
Msa0175110 MtrunA17_Chr8g0375751 48.864 264 127 4 411 669 142 402 1.37e-75 249
Msa0175110 MtrunA17_Chr8g0375751 42.529 87 49 1 106 191 45 131 3.60e-13 72.0
Msa0175110 MtrunA17_Chr6g0452181 49.174 242 113 6 412 643 160 401 1.46e-67 228
Msa0175110 MtrunA17_Chr6g0452181 49.351 77 37 1 116 190 51 127 2.04e-15 79.3
Msa0175110 MtrunA17_Chr1g0189231 31.982 222 122 6 413 609 606 823 3.71e-31 130
Msa0175110 MtrunA17_Chr6g0488541 28.682 258 120 5 414 609 642 897 6.98e-30 126
Msa0175110 MtrunA17_Chr1g0154491 31.020 245 146 12 403 635 94 327 1.91e-18 87.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0175110 AT1G71710.2 54.440 687 243 14 15 667 2 652 0.0 682
Msa0175110 AT1G71710.1 54.440 687 243 14 15 667 11 661 0.0 682
Msa0175110 AT1G34120.2 52.113 568 203 9 99 661 83 586 0.0 551
Msa0175110 AT1G34120.1 52.297 566 201 9 101 661 81 582 0.0 550
Msa0175110 AT1G34120.3 51.937 568 203 10 99 661 83 585 0.0 543
Msa0175110 AT1G34120.5 50.507 493 175 9 174 661 3 431 5.97e-153 450
Msa0175110 AT1G34120.4 49.455 459 164 8 101 555 81 475 2.42e-132 398
Msa0175110 AT4G18010.1 54.440 259 115 2 403 658 377 635 2.55e-96 310
Msa0175110 AT2G32010.2 55.385 260 109 4 413 666 324 582 6.21e-94 303
Msa0175110 AT2G32010.2 47.674 86 45 0 123 208 93 178 4.01e-18 89.0
Msa0175110 AT2G32010.1 55.385 260 109 4 413 666 324 582 6.21e-94 303
Msa0175110 AT2G32010.1 47.674 86 45 0 123 208 93 178 4.01e-18 89.0
Msa0175110 AT2G32010.4 55.385 260 109 4 413 666 324 582 6.21e-94 303
Msa0175110 AT2G32010.4 47.674 86 45 0 123 208 93 178 4.01e-18 89.0
Msa0175110 AT2G32010.3 55.385 260 109 4 413 666 324 582 6.21e-94 303
Msa0175110 AT2G32010.3 47.674 86 45 0 123 208 93 178 4.01e-18 89.0
Msa0175110 AT3G63240.2 52.830 265 119 3 408 666 271 535 2.25e-93 300
Msa0175110 AT3G63240.2 35.673 171 90 4 20 190 7 157 3.46e-18 89.0
Msa0175110 AT3G63240.1 52.830 265 119 3 408 666 271 535 2.25e-93 300
Msa0175110 AT3G63240.1 35.673 171 90 4 20 190 7 157 3.46e-18 89.0
Msa0175110 AT1G05470.2 53.462 260 114 4 413 666 347 605 1.51e-91 297
Msa0175110 AT1G05470.2 32.370 173 99 3 19 190 6 161 7.51e-19 91.3
Msa0175110 AT1G05470.1 53.462 260 114 4 413 666 347 605 1.51e-91 297
Msa0175110 AT1G05470.1 32.370 173 99 3 19 190 6 161 7.51e-19 91.3
Msa0175110 AT5G65090.2 50.189 265 126 3 402 660 186 450 2.22e-83 271
Msa0175110 AT5G65090.2 49.315 73 37 0 119 191 8 80 1.92e-17 86.3
Msa0175110 AT5G65090.3 50.189 265 126 3 402 660 249 513 9.92e-83 271
Msa0175110 AT5G65090.3 49.315 73 37 0 119 191 71 143 2.64e-17 86.3
Msa0175110 AT5G65090.1 50.189 265 126 3 402 660 249 513 9.92e-83 271
Msa0175110 AT5G65090.1 49.315 73 37 0 119 191 71 143 2.64e-17 86.3
Msa0175110 AT5G04980.4 48.828 256 124 3 403 651 145 400 1.50e-80 261
Msa0175110 AT2G37440.2 54.237 236 102 4 414 645 112 345 1.85e-80 261
Msa0175110 AT2G37440.2 42.857 112 36 3 125 213 3 109 2.06e-14 76.3
Msa0175110 AT2G37440.1 54.237 236 102 4 414 645 193 426 6.11e-80 262
Msa0175110 AT2G37440.1 48.571 105 51 2 117 218 79 183 3.86e-19 91.7
Msa0175110 AT2G37440.3 54.237 236 102 4 414 645 193 426 6.11e-80 262
Msa0175110 AT2G37440.3 48.571 105 51 2 117 218 79 183 3.86e-19 91.7
Msa0175110 AT5G04980.1 48.828 256 124 3 403 651 180 435 8.55e-80 261
Msa0175110 AT5G04980.1 47.826 69 36 0 119 187 7 75 3.35e-14 75.9
Msa0175110 AT5G04980.3 48.828 256 124 3 403 651 180 435 8.55e-80 261
Msa0175110 AT5G04980.3 47.826 69 36 0 119 187 7 75 3.35e-14 75.9
Msa0175110 AT5G04980.2 48.828 256 124 3 403 651 209 464 8.95e-80 261
Msa0175110 AT5G04980.2 47.826 69 36 0 119 187 36 104 2.91e-14 76.3
Msa0175110 AT2G01900.1 51.220 246 112 3 418 657 155 398 1.61e-76 251
Msa0175110 AT2G01900.1 37.500 120 67 3 86 204 29 141 1.88e-14 76.6
Msa0175110 AT2G01900.3 51.220 246 112 3 418 657 163 406 2.01e-76 251
Msa0175110 AT2G01900.3 37.500 120 67 3 86 204 37 149 1.93e-14 76.6
Msa0175110 AT2G01900.2 50.204 245 107 3 418 657 155 389 6.01e-74 244
Msa0175110 AT2G01900.2 37.500 120 67 3 86 204 29 141 2.10e-14 76.3
Msa0175110 AT4G18010.2 53.659 205 92 2 403 604 377 581 1.61e-73 248
Msa0175110 AT1G65580.2 31.618 272 141 8 413 641 351 620 5.02e-35 142
Msa0175110 AT1G65580.1 31.618 272 141 8 413 641 617 886 6.20e-35 142
Msa0175110 AT2G31830.1 29.766 299 149 9 412 665 658 940 1.75e-33 138
Msa0175110 AT2G31830.2 29.766 299 149 9 412 665 658 940 1.75e-33 138
Msa0175110 AT2G31830.3 32.510 243 132 7 412 626 658 896 2.04e-32 134
Msa0175110 AT1G05630.2 31.416 226 125 5 412 609 649 872 3.34e-32 134
Msa0175110 AT2G43900.1 30.973 226 126 5 412 609 655 878 3.93e-32 134
Msa0175110 AT2G43900.2 30.973 226 126 5 412 609 655 878 4.39e-32 134
Msa0175110 AT1G05630.3 31.416 226 125 5 412 609 649 872 4.55e-32 133
Msa0175110 AT1G47510.4 35.714 210 110 9 435 635 70 263 3.88e-24 103
Msa0175110 AT1G47510.1 35.714 210 110 9 435 635 132 325 1.64e-23 102
Msa0175110 AT1G05630.1 46.067 89 46 2 523 609 818 906 6.88e-17 85.9
Msa0175110 AT1G47510.2 43.590 117 55 5 527 635 149 262 2.50e-15 77.4

Find 155 sgRNAs with CRISPR-Local

Find 516 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTTGTTTATAGAATTTA+TGG 0.063950 1_4:+60949961 Msa0175110:intron
GGTGAAGAACATAATTTATT+TGG 0.142900 1_4:+60951587 Msa0175110:CDS
TGAATTAATCTCGTACTTAT+AGG 0.195385 1_4:-60953478 None:intergenic
TCATTGTCTGAATCAGTTTC+AGG 0.208520 1_4:-60950071 None:intergenic
CGACTATTCATTTGAAGATT+TGG 0.215144 1_4:+60950173 Msa0175110:CDS
AAAATGTTACTCGTGTTTAA+AGG 0.232239 1_4:-60951356 None:intergenic
AACTGTTGGTGTTGGTGTTA+TGG 0.238835 1_4:+60952207 Msa0175110:CDS
AGAATTTCTTCTTCTATATC+TGG 0.254254 1_4:-60951521 None:intergenic
TCATGATAAGAGCATATAAT+TGG 0.254277 1_4:-60954449 None:intergenic
GCAAATGGCTTAACATTAAA+AGG 0.260784 1_4:+60950000 Msa0175110:CDS
AGTGCTCGCTGTAGCTTCTT+TGG 0.278921 1_4:-60953907 None:intergenic
ACTGTTGGTGTTGGTGTTAT+GGG 0.280728 1_4:+60952208 Msa0175110:CDS
TTTGATTTAATTTACAACTA+TGG 0.282676 1_4:-60954393 None:intergenic
TCTGATGGTTTAAACTTTGA+TGG 0.282944 1_4:-60951491 None:intergenic
TTATTTGCAGAAGAATAATT+TGG 0.290513 1_4:+60952871 Msa0175110:intron
AACAGATGCTATAGATTTAC+TGG 0.299403 1_4:+60952042 Msa0175110:CDS
GGTGTACGCCTCGCAACCTT+TGG 0.301674 1_4:-60953522 None:intergenic
GGGGAAGCCGGTCACGGATT+AGG 0.306749 1_4:+60950362 Msa0175110:CDS
CTCATGATCCAAGATACTTT+TGG 0.312592 1_4:-60952561 None:intergenic
GATTTGGAAATTGAGGATTA+TGG 0.321517 1_4:+60950189 Msa0175110:CDS
CAGAATTTCTCCCAGGCTTA+AGG 0.327355 1_4:+60950705 Msa0175110:intron
ACCCGTGACTGCCACATATA+TGG 0.328230 1_4:+60953864 Msa0175110:CDS
CTTATCAAAGAAGGTTGAAT+AGG 0.329509 1_4:+60951708 Msa0175110:CDS
AAGCTATCTAGAATGATTAA+TGG 0.329819 1_4:+60951797 Msa0175110:CDS
GGGAAGCCGGTCACGGATTA+GGG 0.338322 1_4:+60950363 Msa0175110:CDS
TGGAATTTAGCAACATAATC+TGG 0.339847 1_4:+60953985 Msa0175110:exon
GGTGAGGAGATTCATCCTTT+AGG 0.342847 1_4:+60951566 Msa0175110:CDS
TTAAAACCTAGTTGATAGAT+TGG 0.348812 1_4:+60954304 Msa0175110:three_prime_UTR
TGGACTTCCCAAAAGTATCT+TGG 0.350599 1_4:+60952553 Msa0175110:CDS
AAGATATGTAGTGGATTAGT+AGG 0.370085 1_4:-60944053 None:intergenic
GTTGGTGTTATGGGCTATAT+TGG 0.372990 1_4:+60952217 Msa0175110:CDS
TTCAGTGCTTCATCTATGAT+TGG 0.386944 1_4:-60951623 None:intergenic
GAGTACCTGTTGTTGCTTGT+TGG 0.389738 1_4:-60949707 None:intergenic
CACAGCCAACAAGCAACAAC+AGG 0.389941 1_4:+60949702 Msa0175110:CDS
CAACAATGGTCATGCGCAAA+TGG 0.392807 1_4:+60949985 Msa0175110:CDS
ACTCTACATGTAGTATGAAT+TGG 0.393078 1_4:+60943987 Msa0175110:five_prime_UTR
AGCACTGAATATTAGTTTGA+AGG 0.396504 1_4:+60951637 Msa0175110:CDS
CCTGCTGATATCTATGTCCT+TGG 0.397019 1_4:+60950958 Msa0175110:CDS
ATGTGGCAGTCACGGGTCTA+TGG 0.397224 1_4:-60953858 None:intergenic
TCATGACAAGTTTCGGCACT+TGG 0.403840 1_4:+60953965 Msa0175110:CDS
ATTTGAAGATTTGGAAATTG+AGG 0.405299 1_4:+60950182 Msa0175110:CDS
TTAGAAAGCGATAGTGATAT+TGG 0.406935 1_4:+60951545 Msa0175110:CDS
GAAGAAGTCATGACAAGTTT+CGG 0.412405 1_4:+60953958 Msa0175110:CDS
TTGTAAATTAAATCAAATAT+AGG 0.414138 1_4:+60954399 Msa0175110:three_prime_UTR
GTCTTATTAAACGATTTAAC+CGG 0.414616 1_4:-60951983 None:intergenic
AGCTATCTAGAATGATTAAT+GGG 0.418456 1_4:+60951798 Msa0175110:CDS
CGTATTCTATCACATGGAAA+TGG 0.418767 1_4:+60953790 Msa0175110:CDS
CACATATATGGCAGAGGTTG+AGG 0.419355 1_4:+60953876 Msa0175110:CDS
ATCAGTTATCTTATCAAAGA+AGG 0.426818 1_4:+60951699 Msa0175110:CDS
GTGTACGCCTCGCAACCTTT+GGG 0.433772 1_4:-60953521 None:intergenic
GTTAGTGGGACTGAAAGAAT+TGG 0.433816 1_4:+60951890 Msa0175110:CDS
CTGACGAAGGAACATATATC+TGG 0.435370 1_4:+60944126 Msa0175110:five_prime_UTR
TTTGTTGCCTCAGAAAGTAT+TGG 0.436972 1_4:+60951940 Msa0175110:CDS
TCTTTGTTTATAGAATTTAT+GGG 0.438492 1_4:+60949962 Msa0175110:intron
TGGAAGTATGATCTCTCTTA+AGG 0.438808 1_4:+60945957 Msa0175110:exon
TACTCGTCCTGTACCGAAAT+GGG 0.439941 1_4:+60951391 Msa0175110:CDS
TGCAGAAGAATAATTTGGTT+CGG 0.440082 1_4:+60952876 Msa0175110:intron
TTCTTCAATCCCTTTCCTCA+TGG 0.444295 1_4:+60943952 Msa0175110:five_prime_UTR
ATATTATTTACTGAATTTGA+AGG 0.445218 1_4:+60954126 Msa0175110:three_prime_UTR
ATGACTTTGATATTGATGAT+TGG 0.445623 1_4:+60950920 Msa0175110:CDS
AACAAATGTAATGGTGGCTC+TGG 0.447550 1_4:-60951923 None:intergenic
TTTCTATTAGAGTATGTGTT+GGG 0.452675 1_4:+60950866 Msa0175110:intron
CCACCTTACGGCAGGTGAAA+AGG 0.453682 1_4:+60952454 Msa0175110:CDS
ATACTCGTCCTGTACCGAAA+TGG 0.454190 1_4:+60951390 Msa0175110:CDS
AATTGGAAGAATTGTAATTG+AGG 0.457576 1_4:-60954432 None:intergenic
AAATTATGTTCTTCACCTAA+AGG 0.459993 1_4:-60951581 None:intergenic
TGCCATATATGTGGCAGTCA+CGG 0.462589 1_4:-60953866 None:intergenic
TATAAATAGCCATGAGGAAA+GGG 0.464206 1_4:-60943961 None:intergenic
GATTAGTAGGTATACTGATC+AGG 0.468889 1_4:-60944040 None:intergenic
GGCAAAAGTCATTGACTGTA+AGG 0.470476 1_4:+60950729 Msa0175110:CDS
ATCTTGAAGCTTTGATGAAG+AGG 0.470630 1_4:+60952074 Msa0175110:CDS
AGCATTTCGTTTGATTTCAT+CGG 0.472148 1_4:-60952480 None:intergenic
CTTTATATGCACCCACCTTA+CGG 0.476641 1_4:+60952442 Msa0175110:CDS
GGTTTAAACTTTGATGGAGA+TGG 0.477628 1_4:-60951485 None:intergenic
GACTGTATGATTTGTACATA+TGG 0.478230 1_4:+60954264 Msa0175110:three_prime_UTR
ATATCTGGTGCATCATCTGA+TGG 0.479222 1_4:-60951506 None:intergenic
GCCATATATGTGGCAGTCAC+GGG 0.485409 1_4:-60953865 None:intergenic
ATCTCGTACTTATAGGTTGG+TGG 0.485679 1_4:-60953471 None:intergenic
GATTAGTAAGCTATCTAGAA+TGG 0.486586 1_4:+60951868 Msa0175110:CDS
TATCATATGGCAAGCTGATA+CGG 0.487049 1_4:-60952911 None:intergenic
TGTTGCAACCGTTGCTTGCA+AGG 0.487428 1_4:-60944102 None:intergenic
TTAACCGGTTTAAAAGAAGT+TGG 0.498071 1_4:-60951968 None:intergenic
CTGAAAGAATTGGTTTGAGC+TGG 0.499133 1_4:+60951900 Msa0175110:CDS
CTGCTGATATCTATGTCCTT+GGG 0.499146 1_4:+60950959 Msa0175110:CDS
AACATGAAGGTTTCAACTGT+TGG 0.500406 1_4:+60952193 Msa0175110:CDS
CAGGAGAGAGGATGAAGCTC+CGG 0.509164 1_4:+60950387 Msa0175110:CDS
TGAGATTACTGAGTTACAAA+AGG 0.512142 1_4:+60953815 Msa0175110:CDS
TCCTGTCCCTAATCCGTGAC+CGG 0.513210 1_4:-60950369 None:intergenic
AAGGTTTCAACTGTTGGTGT+TGG 0.514208 1_4:+60952199 Msa0175110:CDS
TTAATCTCGTACTTATAGGT+TGG 0.517794 1_4:-60953474 None:intergenic
TTCTGAGGCAACAAATGTAA+TGG 0.523939 1_4:-60951932 None:intergenic
TGAACTGCAGAATTTCTCCC+AGG 0.530982 1_4:+60950698 Msa0175110:intron
CCAAGGACATAGATATCAGC+AGG 0.535441 1_4:-60950958 None:intergenic
GCCGGTCACGGATTAGGGAC+AGG 0.536950 1_4:+60950368 Msa0175110:CDS
TTAGAGTATGTGTTGGGACA+TGG 0.539774 1_4:+60950872 Msa0175110:intron
ATTAATTCAGACAAGTACAT+TGG 0.541947 1_4:+60953492 Msa0175110:CDS
TGTTCTGAATATGTTTCCGC+AGG 0.543544 1_4:-60952174 None:intergenic
CAGAGTGGGGAAGCCGGTCA+CGG 0.545381 1_4:+60950356 Msa0175110:intron
TCTACGAAGAAGAGTGGCTA+TGG 0.548822 1_4:+60945937 Msa0175110:intron
ATATAAATAGCCATGAGGAA+AGG 0.550987 1_4:-60943962 None:intergenic
TCATCACGGTATGGGTTCGA+AGG 0.552651 1_4:+60952149 Msa0175110:CDS
TTTAGCAACATAATCTGGAC+AGG 0.552955 1_4:+60953990 Msa0175110:exon
CTTGTGAAAGAATTAGAGAA+AGG 0.553223 1_4:+60953411 Msa0175110:CDS
TGTGTTGGGACATGGAATGT+TGG 0.555711 1_4:+60950880 Msa0175110:CDS
TCTCGTACTTATAGGTTGGT+GGG 0.555840 1_4:-60953470 None:intergenic
TGGAGATGGAGGATCACTAA+AGG 0.558217 1_4:-60951471 None:intergenic
GAAACATATTCAGAACATGA+AGG 0.559314 1_4:+60952180 Msa0175110:CDS
CTCAACCTCTGCCATATATG+TGG 0.563035 1_4:-60953875 None:intergenic
ATAGAATTTATGGGCAACAA+TGG 0.563404 1_4:+60949971 Msa0175110:intron
AAGCTATCTAGAATGGTTAG+TGG 0.565033 1_4:+60951875 Msa0175110:CDS
ATATGCACCCACCTTACGGC+AGG 0.566040 1_4:+60952446 Msa0175110:CDS
GAAACTGATTCAGACAATGA+AGG 0.567354 1_4:+60950074 Msa0175110:CDS
ATGGCTTAACATTAAAAGGA+AGG 0.567804 1_4:+60950004 Msa0175110:CDS
TTAAACTTTGATGGAGATGG+AGG 0.571133 1_4:-60951482 None:intergenic
TAGTCACCATCTGATTCAGC+CGG 0.571583 1_4:-60950406 None:intergenic
AGCTATCTAGAATGGTTAGT+GGG 0.573263 1_4:+60951876 Msa0175110:CDS
GGTCTCTCCAATACTTTCTG+AGG 0.576164 1_4:-60951947 None:intergenic
TGCGATCGTATTCTATCACA+TGG 0.579104 1_4:+60953784 Msa0175110:CDS
TTTCCGCGAGGAAGATTCAT+CGG 0.585056 1_4:+60951739 Msa0175110:CDS
ATTGTGCAGAGTGGGGAAGC+CGG 0.586219 1_4:+60950350 Msa0175110:intron
GTGGTATTTGAATCATCACT+TGG 0.586257 1_4:-60954369 None:intergenic
GACTGCCACATATATGGCAG+AGG 0.590077 1_4:+60953870 Msa0175110:CDS
GTCTCAATATATAAACAAGA+AGG 0.590829 1_4:+60950751 Msa0175110:CDS
ACAAAGCCAATCTATCAACT+AGG 0.591192 1_4:-60954310 None:intergenic
TCAAGTGTCCTTGCAAGCAA+CGG 0.593561 1_4:+60944094 Msa0175110:five_prime_UTR
ATTTCAGACAGTGATGAAGC+AGG 0.595377 1_4:+60949666 Msa0175110:intron
GAAGCTCCGGCTGAATCAGA+TGG 0.599862 1_4:+60950400 Msa0175110:CDS
CAAACTAAAGCATACCATGC+TGG 0.608342 1_4:-60953543 None:intergenic
ATAGTGAGCAAGCAGATGGT+TGG 0.609242 1_4:+60952121 Msa0175110:CDS
GTTGGGACATGGAATGTTGG+AGG 0.610467 1_4:+60950883 Msa0175110:CDS
AAGCGATAGTGATATTGGTG+AGG 0.614723 1_4:+60951550 Msa0175110:CDS
AATTTCTCCCAGGCTTAAGG+AGG 0.618284 1_4:+60950708 Msa0175110:CDS
ACGGATTAGGGACAGGAGAG+AGG 0.618825 1_4:+60950375 Msa0175110:CDS
TATGGGCTATATTGGTAACA+AGG 0.624421 1_4:+60952225 Msa0175110:CDS
TCATCACTTGGAAATTCACA+TGG 0.626583 1_4:-60954357 None:intergenic
TTCAGACAAGTACATTGGAG+AGG 0.633311 1_4:+60953497 Msa0175110:CDS
GAGAGGACCCAAAGGTTGCG+AGG 0.634911 1_4:+60953514 Msa0175110:CDS
TGAGGCAACAAATGTAATGG+TGG 0.637973 1_4:-60951929 None:intergenic
TTTAATTTACAACTATGGAG+TGG 0.639270 1_4:-60954388 None:intergenic
TATAACAAGAAGATATGTAG+TGG 0.643028 1_4:-60944062 None:intergenic
GGACATAGATATCAGCAGGA+TGG 0.644979 1_4:-60950954 None:intergenic
TTGCGAGGCGTACACCAGCA+TGG 0.653553 1_4:+60953529 Msa0175110:CDS
AAGTATGATCTCTCTTAAGG+AGG 0.673903 1_4:+60945960 Msa0175110:exon
TATGGGTTCGAAGGAGCCTG+CGG 0.674551 1_4:+60952158 Msa0175110:CDS
GTACATTGGAGAGGACCCAA+AGG 0.674845 1_4:+60953506 Msa0175110:CDS
ACACTTTCTCTCAGTCTCAG+TGG 0.676726 1_4:-60944010 None:intergenic
GAAGATAGTGAGCAAGCAGA+TGG 0.678985 1_4:+60952117 Msa0175110:CDS
ATGTTCGTGAAATACATCAG+AGG 0.682749 1_4:+60952504 Msa0175110:CDS
TCAATATCAAAGTCATTACG+TGG 0.690024 1_4:-60950913 None:intergenic
ACGGTTGCAACAGCTGACGA+AGG 0.696375 1_4:+60944113 Msa0175110:five_prime_UTR
AAAATTGGTTGAGAGAGACC+AGG 0.701785 1_4:+60952968 Msa0175110:CDS
ATATAAACAAGAAGGAACTG+AGG 0.702635 1_4:+60950759 Msa0175110:CDS
AGTTAATATAAATAGCCATG+AGG 0.717619 1_4:-60943967 None:intergenic
TTTCCGATGAATCTTCCTCG+CGG 0.752096 1_4:-60951742 None:intergenic
TAGGCTAAATCATTTCCGCG+AGG 0.776950 1_4:+60951727 Msa0175110:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTATATATAATTTTTTAA+CGG + chr1_4:60947007-60947026 Msa0175110:intron 0.0%
!!! TTTTTTAATTTTCTTTTTGA+AGG - chr1_4:60944441-60944460 None:intergenic 10.0%
!! AAAATTAAAAAAAGAGAATA+AGG + chr1_4:60944449-60944468 Msa0175110:intron 10.0%
!! AAATTAAAAAAAGAGAATAA+GGG + chr1_4:60944450-60944469 Msa0175110:intron 10.0%
!! ATAATTTCTCTTAATTTATA+TGG - chr1_4:60944729-60944748 None:intergenic 10.0%
!!! ATGATATTATATTTGTTATA+TGG + chr1_4:60945106-60945125 Msa0175110:intron 10.0%
!! TAATTCATATAAATTATGAA+CGG - chr1_4:60945254-60945273 None:intergenic 10.0%
!!! ATATACATAAGTATTTTTTT+AGG + chr1_4:60946178-60946197 Msa0175110:intron 10.0%
!!! TATACATAAGTATTTTTTTA+GGG + chr1_4:60946179-60946198 Msa0175110:intron 10.0%
!! AACACTAATTTATTTATATT+TGG - chr1_4:60946295-60946314 None:intergenic 10.0%
!!! AGTTTTTTTTTTTGTAATTA+TGG - chr1_4:60947169-60947188 None:intergenic 10.0%
!! TAAAAAAATTTAGATATGTT+TGG + chr1_4:60947534-60947553 Msa0175110:intron 10.0%
!! TATTGTAATTAATAAAACAT+TGG + chr1_4:60950119-60950138 Msa0175110:intron 10.0%
!!! TCACTTTTTTTTTTTTTTTA+TGG + chr1_4:60951071-60951090 Msa0175110:intron 10.0%
!! TTGTAAATTAAATCAAATAT+AGG + chr1_4:60954399-60954418 Msa0175110:three_prime_UTR 10.0%
!! ATTAATTAATTATAGAGAAG+AGG - chr1_4:60944212-60944231 None:intergenic 15.0%
!! ATGTTAAGAATATAAAACAA+TGG - chr1_4:60944668-60944687 None:intergenic 15.0%
!!! TGTTTTTTTTTGACAAAATA+TGG - chr1_4:60944698-60944717 None:intergenic 15.0%
!!! TTAAGTTTAATTTGTCTATT+TGG - chr1_4:60944756-60944775 None:intergenic 15.0%
!!! CTTTTTTTACAAATAGATTT+GGG - chr1_4:60944866-60944885 None:intergenic 15.0%
!!! TCTTTTTTTACAAATAGATT+TGG - chr1_4:60944867-60944886 None:intergenic 15.0%
!!! TATTATATTTGTTATATGGT+TGG + chr1_4:60945110-60945129 Msa0175110:intron 15.0%
!!! TTTTATTTATAGTTTCCTTT+AGG + chr1_4:60945603-60945622 Msa0175110:intron 15.0%
!! TTTATTTATAGTTTCCTTTA+GGG + chr1_4:60945604-60945623 Msa0175110:intron 15.0%
!! TTTATACAATAATTCATGAT+CGG + chr1_4:60945739-60945758 Msa0175110:intron 15.0%
!!! GTTTGTGAAATTTTAAAATT+TGG + chr1_4:60945905-60945924 Msa0175110:intron 15.0%
!! AACACATTAAATTTACTAAA+TGG - chr1_4:60946109-60946128 None:intergenic 15.0%
!! AATTTAATGTGTTAAATTAG+TGG + chr1_4:60946116-60946135 Msa0175110:intron 15.0%
!! TGAAAAAAAATAGAGAATTT+AGG - chr1_4:60946234-60946253 None:intergenic 15.0%
!! TAATTCTCATGTTTAATAAA+CGG - chr1_4:60946923-60946942 None:intergenic 15.0%
!! CAATTCATAAATATTAGTTA+AGG - chr1_4:60947778-60947797 None:intergenic 15.0%
!!! TATTATGATAATGTACAAAA+AGG + chr1_4:60948637-60948656 Msa0175110:intron 15.0%
!! ATTATTAGGCTATATAAAAA+AGG + chr1_4:60948725-60948744 Msa0175110:intron 15.0%
!! AAAAAAAAAATTAAGACTGT+TGG + chr1_4:60948763-60948782 Msa0175110:intron 15.0%
!!! TAAGTTTAGATTTTCTATAA+TGG - chr1_4:60949447-60949466 None:intergenic 15.0%
!! ATTAATTTAAATTCCATACA+AGG + chr1_4:60949495-60949514 Msa0175110:intron 15.0%
!! ATTTCTTTATAAATTCTAGT+CGG + chr1_4:60949825-60949844 Msa0175110:intron 15.0%
!!! TCTTTGTTTATAGAATTTAT+GGG + chr1_4:60949962-60949981 Msa0175110:intron 15.0%
!! TATTAAAAGTGATTTCAAAA+TGG - chr1_4:60951036-60951055 None:intergenic 15.0%
!! TAAATTAACATATTTGAATG+TGG - chr1_4:60952606-60952625 None:intergenic 15.0%
!!! TTACCTTAATTTTAATCAAA+AGG - chr1_4:60952657-60952676 None:intergenic 15.0%
!! TTCTAATTTAATCATATAGA+AGG - chr1_4:60952741-60952760 None:intergenic 15.0%
!! TATTTATATCCTTATTCATT+TGG + chr1_4:60953325-60953344 Msa0175110:intron 15.0%
!! TTATGAGTATGATAAAAAAA+TGG - chr1_4:60953629-60953648 None:intergenic 15.0%
!! ATATTATTTACTGAATTTGA+AGG + chr1_4:60954126-60954145 Msa0175110:three_prime_UTR 15.0%
!!! TTTGATTTAATTTACAACTA+TGG - chr1_4:60954396-60954415 None:intergenic 15.0%
!! CCATCTTAAACATAAATAAA+GGG - chr1_4:60944328-60944347 None:intergenic 20.0%
!! ACCATCTTAAACATAAATAA+AGG - chr1_4:60944329-60944348 None:intergenic 20.0%
!! AGATCTTAACCATAAATAAA+GGG - chr1_4:60944401-60944420 None:intergenic 20.0%
!! TAGATCTTAACCATAAATAA+AGG - chr1_4:60944402-60944421 None:intergenic 20.0%
!! TTAAGATCTAAATAGAGTAA+GGG + chr1_4:60944412-60944431 Msa0175110:intron 20.0%
!!! ATGTCATTTTTTCACTTTAT+AGG - chr1_4:60944618-60944637 None:intergenic 20.0%
!! TCTAGATTGGATAATTAATA+AGG - chr1_4:60944781-60944800 None:intergenic 20.0%
!!! TTTGGGATATTTTCATAATT+GGG - chr1_4:60944849-60944868 None:intergenic 20.0%
!!! ATTTGGGATATTTTCATAAT+TGG - chr1_4:60944850-60944869 None:intergenic 20.0%
!! AATCCCATATATAATTATGA+AGG + chr1_4:60944921-60944940 Msa0175110:intron 20.0%
!! ACTCCTTCATAATTATATAT+GGG - chr1_4:60944927-60944946 None:intergenic 20.0%
!! TACTCCTTCATAATTATATA+TGG - chr1_4:60944928-60944947 None:intergenic 20.0%
!!! AATTAGCTTAAGGTTATAAT+TGG - chr1_4:60945010-60945029 None:intergenic 20.0%
!! AATTAACGCAATAAGAATAA+GGG + chr1_4:60945269-60945288 Msa0175110:intron 20.0%
!! ATACTGAAAGACTTAATTAA+TGG + chr1_4:60945389-60945408 Msa0175110:intron 20.0%
!! TCAATTACGAGATTTATAAT+TGG + chr1_4:60945579-60945598 Msa0175110:intron 20.0%
!! ATGAAACATGTATATCATTA+TGG - chr1_4:60945853-60945872 None:intergenic 20.0%
!! AATATTCACATCTTTAATGT+CGG - chr1_4:60946362-60946381 None:intergenic 20.0%
!! AATTATAACAACATTCACAA+TGG + chr1_4:60946938-60946957 Msa0175110:intron 20.0%
!! ATAAATAAGTGATCAAATTG+AGG + chr1_4:60947409-60947428 Msa0175110:intron 20.0%
!!! AATCTTTTTTTATATCTTGC+CGG - chr1_4:60947614-60947633 None:intergenic 20.0%
!! TGATAAAATATAAGTCAAGT+GGG - chr1_4:60947874-60947893 None:intergenic 20.0%
!! ATGATAAAATATAAGTCAAG+TGG - chr1_4:60947875-60947894 None:intergenic 20.0%
!!! ACTTGACTTATATTTTATCA+TGG + chr1_4:60947874-60947893 Msa0175110:intron 20.0%
!! TTTATAGACAAATACGTAAT+TGG - chr1_4:60948490-60948509 None:intergenic 20.0%
!! TCTTCAATGAGAAAAATATT+AGG - chr1_4:60948543-60948562 None:intergenic 20.0%
!! AATGAAACATAGAAGAAATA+TGG - chr1_4:60948824-60948843 None:intergenic 20.0%
!! TCATATTAAAGCCATTTAAT+TGG + chr1_4:60949257-60949276 Msa0175110:intron 20.0%
!!! ATCAAAGAAGTATAGTAATT+TGG + chr1_4:60949294-60949313 Msa0175110:intron 20.0%
!!! TGTATTTTATTATATCTGCT+AGG + chr1_4:60949396-60949415 Msa0175110:intron 20.0%
!!! GTCTTTGTTTATAGAATTTA+TGG + chr1_4:60949961-60949980 Msa0175110:intron 20.0%
!!! AAAGTGTTTTTATATACACT+TGG + chr1_4:60951264-60951283 Msa0175110:intron 20.0%
!! ATCAGAAAGTGAATAAAAAT+GGG - chr1_4:60952531-60952550 None:intergenic 20.0%
!! AATCAGAAAGTGAATAAAAA+TGG - chr1_4:60952532-60952551 None:intergenic 20.0%
!!! TTTTATTCACTTTCTGATTT+TGG + chr1_4:60952533-60952552 Msa0175110:CDS 20.0%
!!! ATGCCTTTTGATTAAAATTA+AGG + chr1_4:60952651-60952670 Msa0175110:intron 20.0%
!! GATTAATTTACTTCAATAGA+AGG - chr1_4:60952764-60952783 None:intergenic 20.0%
!! TTATTTGCAGAAGAATAATT+TGG + chr1_4:60952871-60952890 Msa0175110:intron 20.0%
!!! ATTTTGAACTCAAGTTAAAA+GGG + chr1_4:60953362-60953381 Msa0175110:intron 20.0%
!!! TCATTTTACTAAGAACAATT+TGG - chr1_4:60953653-60953672 None:intergenic 20.0%
! AGTTAATATAAATAGCCATG+AGG - chr1_4:60943970-60943989 None:intergenic 25.0%
! TATAACAAGAAGATATGTAG+TGG - chr1_4:60944065-60944084 None:intergenic 25.0%
!! CCCTTTATTTATGTTTAAGA+TGG + chr1_4:60944325-60944344 Msa0175110:intron 25.0%
! CCATAAATAAAGGGAAATAA+AGG - chr1_4:60944392-60944411 None:intergenic 25.0%
!! CCTTTATTTCCCTTTATTTA+TGG + chr1_4:60944389-60944408 Msa0175110:intron 25.0%
! GTTAAGATCTAAATAGAGTA+AGG + chr1_4:60944411-60944430 Msa0175110:intron 25.0%
! CCAACAAAATAACATTATGA+TGG - chr1_4:60945036-60945055 None:intergenic 25.0%
!!! CCATCATAATGTTATTTTGT+TGG + chr1_4:60945033-60945052 Msa0175110:intron 25.0%
! GAATTAACGCAATAAGAATA+AGG + chr1_4:60945268-60945287 Msa0175110:intron 25.0%
!!! TACTAGATTTTTGTTGTTGA+CGG + chr1_4:60945453-60945472 Msa0175110:intron 25.0%
! GAAGTTAAACCGATAAAATA+AGG + chr1_4:60945500-60945519 Msa0175110:intron 25.0%
!!! ATCTCGATTCCTTATTTTAT+CGG - chr1_4:60945512-60945531 None:intergenic 25.0%
! AAATAAGGAATCGAGATAAA+AGG + chr1_4:60945515-60945534 Msa0175110:intron 25.0%
!! TAGCCATGTTGTTTATTTAA+TGG - chr1_4:60945692-60945711 None:intergenic 25.0%
! CGAGATGTCTATATTTAATT+TGG - chr1_4:60945886-60945905 None:intergenic 25.0%
! CTCATGTATGTGTTAAATTA+TGG + chr1_4:60946149-60946168 Msa0175110:intron 25.0%
! GGAAATTACTATACATAAGT+TGG + chr1_4:60946200-60946219 Msa0175110:intron 25.0%
! ATATTTCTTTACGTCTTACA+TGG + chr1_4:60946377-60946396 Msa0175110:intron 25.0%
! CAGCTCATCTAAATTAATAT+TGG - chr1_4:60946631-60946650 None:intergenic 25.0%
!! TAGCTGATTTATATTGTGTT+CGG + chr1_4:60946675-60946694 Msa0175110:intron 25.0%
!!! ATGACATGTCGATTTTTATT+TGG + chr1_4:60946800-60946819 Msa0175110:intron 25.0%
!!! TGACATGTCGATTTTTATTT+GGG + chr1_4:60946801-60946820 Msa0175110:intron 25.0%
!!! TGATATTTTTAGACAACACA+AGG - chr1_4:60946877-60946896 None:intergenic 25.0%
! GGACTCTAAATATCATAAAT+TGG - chr1_4:60946902-60946921 None:intergenic 25.0%
! AACATTCATTATCTTCAACT+AGG + chr1_4:60947041-60947060 Msa0175110:intron 25.0%
! ACATTCATTATCTTCAACTA+GGG + chr1_4:60947042-60947061 Msa0175110:intron 25.0%
!! AAATTTAGATATGTTTGGTG+TGG + chr1_4:60947539-60947558 Msa0175110:intron 25.0%
!!! ACTTTTTAACTAGTATCTAG+AGG - chr1_4:60947650-60947669 None:intergenic 25.0%
! AAAAAATTTGCGTTGAAAAG+TGG - chr1_4:60947745-60947764 None:intergenic 25.0%
! ACATTAGAAAGAGAAAAAGA+AGG + chr1_4:60948038-60948057 Msa0175110:intron 25.0%
! ATACTGAAATGACAAAGAAA+AGG - chr1_4:60948309-60948328 None:intergenic 25.0%
! TTGTTCAACAATCAACAATA+TGG + chr1_4:60948335-60948354 Msa0175110:intron 25.0%
!! ATTTTTCTCATTGAAGATGT+TGG + chr1_4:60948546-60948565 Msa0175110:intron 25.0%
!! TTTTTCTCATTGAAGATGTT+GGG + chr1_4:60948547-60948566 Msa0175110:intron 25.0%
! TATGGACATAATTCAATGTT+CGG + chr1_4:60948578-60948597 Msa0175110:intron 25.0%
!!! CAAAAAGGTACTTTATTGTA+TGG + chr1_4:60948652-60948671 Msa0175110:intron 25.0%
! AAATATGGACAAATTAAGGT+CGG - chr1_4:60948809-60948828 None:intergenic 25.0%
! GAAGAAATATGGACAAATTA+AGG - chr1_4:60948813-60948832 None:intergenic 25.0%
!! ATGGAGTATTACCAATTATA+AGG - chr1_4:60949219-60949238 None:intergenic 25.0%
! TTTAGTGCAAACCAATTAAA+TGG - chr1_4:60949271-60949290 None:intergenic 25.0%
!! AAAGAAGTATAGTAATTTGG+AGG + chr1_4:60949297-60949316 Msa0175110:intron 25.0%
! TTCACATGCAAATATTTGAA+TGG - chr1_4:60949423-60949442 None:intergenic 25.0%
! ATTCCATACAAGGAAAAAAA+AGG + chr1_4:60949505-60949524 Msa0175110:intron 25.0%
!!! CTTATTTTTATACTGGATAC+CGG + chr1_4:60949753-60949772 Msa0175110:intron 25.0%
! ACCTTATCTATAATCTATGT+GGG + chr1_4:60949848-60949867 Msa0175110:intron 25.0%
! ATTTGAAGATTTGGAAATTG+AGG + chr1_4:60950182-60950201 Msa0175110:CDS 25.0%
!! TGATCTGTCTCAATTTTATT+TGG + chr1_4:60950323-60950342 Msa0175110:intron 25.0%
!!! GATCTGTCTCAATTTTATTT+GGG + chr1_4:60950324-60950343 Msa0175110:intron 25.0%
!! TTGACAATTTTTCCTGTATT+AGG + chr1_4:60950552-60950571 Msa0175110:intron 25.0%
! GTCTCAATATATAAACAAGA+AGG + chr1_4:60950751-60950770 Msa0175110:CDS 25.0%
!! TTTTCTATTAGAGTATGTGT+TGG + chr1_4:60950865-60950884 Msa0175110:intron 25.0%
! TTTCTATTAGAGTATGTGTT+GGG + chr1_4:60950866-60950885 Msa0175110:intron 25.0%
!! ATGACTTTGATATTGATGAT+TGG + chr1_4:60950920-60950939 Msa0175110:CDS 25.0%
! TGCATATACACTCAAATATA+AGG + chr1_4:60951010-60951029 Msa0175110:intron 25.0%
! AAAATGTTACTCGTGTTTAA+AGG - chr1_4:60951359-60951378 None:intergenic 25.0%
!! CTAAAGGATTTTATCTTTGA+AGG - chr1_4:60951458-60951477 None:intergenic 25.0%
! AGAATTTCTTCTTCTATATC+TGG - chr1_4:60951524-60951543 None:intergenic 25.0%
! AAATTATGTTCTTCACCTAA+AGG - chr1_4:60951584-60951603 None:intergenic 25.0%
! GGTGAAGAACATAATTTATT+TGG + chr1_4:60951587-60951606 Msa0175110:CDS 25.0%
! ATCAGTTATCTTATCAAAGA+AGG + chr1_4:60951699-60951718 Msa0175110:CDS 25.0%
!! AAGCTATCTAGAATGATTAA+TGG + chr1_4:60951797-60951816 Msa0175110:CDS 25.0%
!! AGCTATCTAGAATGATTAAT+GGG + chr1_4:60951798-60951817 Msa0175110:CDS 25.0%
!! GTCTTATTAAACGATTTAAC+CGG - chr1_4:60951986-60952005 None:intergenic 25.0%
!!! TTTTGATTTGAAAGAATCAC+AGG - chr1_4:60952023-60952042 None:intergenic 25.0%
! AACAATGTCTTGAATTTACA+TGG + chr1_4:60952685-60952704 Msa0175110:intron 25.0%
!!! AGATCTCTTGTTTTATCATA+TGG - chr1_4:60952927-60952946 None:intergenic 25.0%
!! ATCTTATCTCAAAAAAGCAT+TGG + chr1_4:60952943-60952962 Msa0175110:CDS 25.0%
!!! AAAAAAGCATTGGTCAAAAT+TGG + chr1_4:60952953-60952972 Msa0175110:CDS 25.0%
!!! TATCAAGTTGATACATCTAA+TGG - chr1_4:60953006-60953025 None:intergenic 25.0%
!!! TTATTGATGTCTTATTTCTG+AGG + chr1_4:60953076-60953095 Msa0175110:intron 25.0%
! ACGGAACATATATTTCTTAA+TGG - chr1_4:60953117-60953136 None:intergenic 25.0%
! CGATTATCTATGTTACAAAA+TGG - chr1_4:60953280-60953299 None:intergenic 25.0%
! AACATAGATAATCGTGTTTA+AGG + chr1_4:60953286-60953305 Msa0175110:intron 25.0%
! ACATAGATAATCGTGTTTAA+GGG + chr1_4:60953287-60953306 Msa0175110:intron 25.0%
! TCATGAAATCCAAATGAATA+AGG - chr1_4:60953337-60953356 None:intergenic 25.0%
!! GATTTTGAACTCAAGTTAAA+AGG + chr1_4:60953361-60953380 Msa0175110:intron 25.0%
! TGAATTAATCTCGTACTTAT+AGG - chr1_4:60953481-60953500 None:intergenic 25.0%
! ATTAATTCAGACAAGTACAT+TGG + chr1_4:60953492-60953511 Msa0175110:CDS 25.0%
! AATGTTTGCAATTACCTTAT+AGG + chr1_4:60953761-60953780 Msa0175110:intron 25.0%
!! ACATATGGTATTTTATGAAC+AGG + chr1_4:60954279-60954298 Msa0175110:three_prime_UTR 25.0%
!!! TTAAAACCTAGTTGATAGAT+TGG + chr1_4:60954304-60954323 Msa0175110:three_prime_UTR 25.0%
!! TTTAATTTACAACTATGGAG+TGG - chr1_4:60954391-60954410 None:intergenic 25.0%
! AATTGGAAGAATTGTAATTG+AGG - chr1_4:60954435-60954454 None:intergenic 25.0%
TATAAATAGCCATGAGGAAA+GGG - chr1_4:60943964-60943983 None:intergenic 30.0%
ATATAAATAGCCATGAGGAA+AGG - chr1_4:60943965-60943984 None:intergenic 30.0%
ACTCTACATGTAGTATGAAT+TGG + chr1_4:60943987-60944006 Msa0175110:five_prime_UTR 30.0%
!! AAGATATGTAGTGGATTAGT+AGG - chr1_4:60944056-60944075 None:intergenic 30.0%
AGAAGAGGAGAAATAGAAAA+AGG - chr1_4:60944197-60944216 None:intergenic 30.0%
! TTTCTTGTCTTATTGAGAAG+AGG - chr1_4:60944280-60944299 None:intergenic 30.0%
!!! TTTTGAAGTTCCTCTTATAC+TGG - chr1_4:60944355-60944374 None:intergenic 30.0%
AGGAACTTCAAAAAGAGTAA+GGG + chr1_4:60944362-60944381 Msa0175110:intron 30.0%
AAACCTTCTCTCAATATTTG+AGG + chr1_4:60944476-60944495 Msa0175110:intron 30.0%
AACCTTCTCTCAATATTTGA+GGG + chr1_4:60944477-60944496 Msa0175110:intron 30.0%
TGAATATGCTAACAAACACT+TGG + chr1_4:60944520-60944539 Msa0175110:intron 30.0%
! TAGAGTTTTCTCATCTAGAT+TGG - chr1_4:60944794-60944813 None:intergenic 30.0%
GGGTTATACTTACAAATTGT+TGG - chr1_4:60944829-60944848 None:intergenic 30.0%
AGCTTAAGGTTATAATTGGA+AGG - chr1_4:60945006-60945025 None:intergenic 30.0%
! ATGATGGTCAAATTAGCTTA+AGG - chr1_4:60945020-60945039 None:intergenic 30.0%
AACGTTGCTGTAAATATAAC+TGG + chr1_4:60945305-60945324 Msa0175110:intron 30.0%
! AGTCTTTCAGTATCCTTTTA+GGG - chr1_4:60945382-60945401 None:intergenic 30.0%
! AAGTCTTTCAGTATCCTTTT+AGG - chr1_4:60945383-60945402 None:intergenic 30.0%
!! TCGAGATAAAAGGTACTATT+TGG + chr1_4:60945525-60945544 Msa0175110:intron 30.0%
!!! TATTTGGTTTTGTCTATCTC+AGG + chr1_4:60945541-60945560 Msa0175110:intron 30.0%
!!! ATTTGGTTTTGTCTATCTCA+GGG + chr1_4:60945542-60945561 Msa0175110:intron 30.0%
TATTTCCACTCATAAAGTTG+AGG - chr1_4:60945632-60945651 None:intergenic 30.0%
TGAGTGGAAATATGTTTAAG+TGG + chr1_4:60945640-60945659 Msa0175110:intron 30.0%
GCTCCATTAAATAAACAACA+TGG + chr1_4:60945686-60945705 Msa0175110:intron 30.0%
AACAACATGGCTACTATAAA+AGG + chr1_4:60945699-60945718 Msa0175110:intron 30.0%
AAATTGCTATGACGTATTGA+AGG + chr1_4:60945791-60945810 Msa0175110:intron 30.0%
AGCTTTCTCAATACCAAATA+GGG + chr1_4:60946452-60946471 Msa0175110:intron 30.0%
TATTAGCTGTACAATCCATT+CGG + chr1_4:60946536-60946555 Msa0175110:intron 30.0%
!!! ATGGTGTTGACTTAGAATTT+TGG + chr1_4:60946568-60946587 Msa0175110:intron 30.0%
!!! TGGTGTTGACTTAGAATTTT+GGG + chr1_4:60946569-60946588 Msa0175110:intron 30.0%
!!! GACATGTCGATTTTTATTTG+GGG + chr1_4:60946802-60946821 Msa0175110:intron 30.0%
TCAAACATGAATGCATATGA+CGG - chr1_4:60946849-60946868 None:intergenic 30.0%
CATTCATTATCTTCAACTAG+GGG + chr1_4:60947043-60947062 Msa0175110:intron 30.0%
!! CTGCACTAGTTTAAAGTTTT+TGG + chr1_4:60947500-60947519 Msa0175110:intron 30.0%
CTATCATATCCTATATGAAC+CGG + chr1_4:60947592-60947611 Msa0175110:intron 30.0%
!! CATTTTAACAGCTCTATTAG+AGG - chr1_4:60947844-60947863 None:intergenic 30.0%
! AATTTCACCTAAACCTGTTT+TGG + chr1_4:60948156-60948175 Msa0175110:intron 30.0%
! ATTTCACCTAAACCTGTTTT+GGG + chr1_4:60948157-60948176 Msa0175110:intron 30.0%
AAAGAAAAGGAGACATTAAG+GGG - chr1_4:60948296-60948315 None:intergenic 30.0%
CAAAGAAAAGGAGACATTAA+GGG - chr1_4:60948297-60948316 None:intergenic 30.0%
ACAAAGAAAAGGAGACATTA+AGG - chr1_4:60948298-60948317 None:intergenic 30.0%
CAATCAACAATATGGAGTAA+AGG + chr1_4:60948343-60948362 Msa0175110:intron 30.0%
ATGTTGAGTGAACAATTCTT+AGG + chr1_4:60948444-60948463 Msa0175110:intron 30.0%
! TTTTCTCATTGAAGATGTTG+GGG + chr1_4:60948548-60948567 Msa0175110:intron 30.0%
! TATTGTATGGTAGTGAAAAG+TGG + chr1_4:60948665-60948684 Msa0175110:intron 30.0%
!! TTAGTAATTTTGGCCTTTCA+CGG + chr1_4:60948883-60948902 Msa0175110:intron 30.0%
CCAATTATAAGGCAATAAGT+GGG - chr1_4:60949208-60949227 None:intergenic 30.0%
ACCAATTATAAGGCAATAAG+TGG - chr1_4:60949209-60949228 None:intergenic 30.0%
!!! AAGCCTTTTTTTTCCTTGTA+TGG - chr1_4:60949511-60949530 None:intergenic 30.0%
TTTGCATCTTCAAATACTGT+CGG + chr1_4:60949567-60949586 Msa0175110:intron 30.0%
! TTTGAAACTGAAGCAAAAGA+AGG - chr1_4:60949627-60949646 None:intergenic 30.0%
GTATAAAAATAAGCCATGCA+AGG - chr1_4:60949746-60949765 None:intergenic 30.0%
!!! TGCATGGCTTATTTTTATAC+TGG + chr1_4:60949746-60949765 Msa0175110:intron 30.0%
GACCTTATCTATAATCTATG+TGG + chr1_4:60949847-60949866 Msa0175110:intron 30.0%
TCCCACATAGATTATAGATA+AGG - chr1_4:60949852-60949871 None:intergenic 30.0%
ATAGAATTTATGGGCAACAA+TGG + chr1_4:60949971-60949990 Msa0175110:intron 30.0%
GCAAATGGCTTAACATTAAA+AGG + chr1_4:60950000-60950019 Msa0175110:CDS 30.0%
ATGGCTTAACATTAAAAGGA+AGG + chr1_4:60950004-60950023 Msa0175110:CDS 30.0%
CGACTATTCATTTGAAGATT+TGG + chr1_4:60950173-60950192 Msa0175110:CDS 30.0%
GATTTGGAAATTGAGGATTA+TGG + chr1_4:60950189-60950208 Msa0175110:CDS 30.0%
! AATTTTGAATGGCCTAATAC+AGG - chr1_4:60950567-60950586 None:intergenic 30.0%
ATTAGGCCATTCAAAATTTG+TGG + chr1_4:60950569-60950588 Msa0175110:intron 30.0%
AATTTGTGGATTCCCAAAAA+TGG + chr1_4:60950583-60950602 Msa0175110:intron 30.0%
!! GAATATGAGGTTCCATTTTT+GGG - chr1_4:60950598-60950617 None:intergenic 30.0%
ATATAAACAAGAAGGAACTG+AGG + chr1_4:60950759-60950778 Msa0175110:CDS 30.0%
TCAATATCAAAGTCATTACG+TGG - chr1_4:60950916-60950935 None:intergenic 30.0%
!! GTGTTTTTATATACACTTGG+TGG + chr1_4:60951267-60951286 Msa0175110:intron 30.0%
! CGAATTAAGTTTTCCCATTT+CGG - chr1_4:60951407-60951426 None:intergenic 30.0%
TCTGATGGTTTAAACTTTGA+TGG - chr1_4:60951494-60951513 None:intergenic 30.0%
TTAGAAAGCGATAGTGATAT+TGG + chr1_4:60951545-60951564 Msa0175110:CDS 30.0%
! AGCACTGAATATTAGTTTGA+AGG + chr1_4:60951637-60951656 Msa0175110:CDS 30.0%
CTTATCAAAGAAGGTTGAAT+AGG + chr1_4:60951708-60951727 Msa0175110:CDS 30.0%
GATTAGTAAGCTATCTAGAA+TGG + chr1_4:60951790-60951809 Msa0175110:CDS 30.0%
! TTAACCGGTTTAAAAGAAGT+TGG - chr1_4:60951971-60951990 None:intergenic 30.0%
AACAGATGCTATAGATTTAC+TGG + chr1_4:60952042-60952061 Msa0175110:CDS 30.0%
GAAACATATTCAGAACATGA+AGG + chr1_4:60952180-60952199 Msa0175110:CDS 30.0%
! AACTCTAGGGAAAATTTCAA+AGG - chr1_4:60952263-60952282 None:intergenic 30.0%
ACCAAAAACTACAAACTCTA+GGG - chr1_4:60952276-60952295 None:intergenic 30.0%
! AGCATTTCGTTTGATTTCAT+CGG - chr1_4:60952483-60952502 None:intergenic 30.0%
! TCATGATCCAAGATACTTTT+GGG - chr1_4:60952563-60952582 None:intergenic 30.0%
AGGCATTAGCATATAATTCA+AGG - chr1_4:60952637-60952656 None:intergenic 30.0%
TGCAGAAGAATAATTTGGTT+CGG + chr1_4:60952876-60952895 Msa0175110:intron 30.0%
! AGTTGATACATCTAATGGAA+GGG - chr1_4:60953001-60953020 None:intergenic 30.0%
!! AAGTTGATACATCTAATGGA+AGG - chr1_4:60953002-60953021 None:intergenic 30.0%
ATAATCGTGTTTAAGGGTTT+AGG + chr1_4:60953293-60953312 Msa0175110:intron 30.0%
TAATCGTGTTTAAGGGTTTA+GGG + chr1_4:60953294-60953313 Msa0175110:intron 30.0%
CTTGTGAAAGAATTAGAGAA+AGG + chr1_4:60953411-60953430 Msa0175110:CDS 30.0%
!!! TTAGAGAAAGGTGTTTTTGA+TGG + chr1_4:60953423-60953442 Msa0175110:CDS 30.0%
TTAATCTCGTACTTATAGGT+TGG - chr1_4:60953477-60953496 None:intergenic 30.0%
TGAGATTACTGAGTTACAAA+AGG + chr1_4:60953815-60953834 Msa0175110:CDS 30.0%
TGGAATTTAGCAACATAATC+TGG + chr1_4:60953985-60954004 Msa0175110:exon 30.0%
! TTTTCCGTAACCTTTACTTT+CGG + chr1_4:60954074-60954093 Msa0175110:intron 30.0%
! GACTGTATGATTTGTACATA+TGG + chr1_4:60954264-60954283 Msa0175110:three_prime_UTR 30.0%
GATTAGTAGGTATACTGATC+AGG - chr1_4:60944043-60944062 None:intergenic 35.0%
GAGGAACTTCAAAAAGAGTA+AGG + chr1_4:60944361-60944380 Msa0175110:intron 35.0%
TTTGAGGGTCATTTCGTTTA+AGG + chr1_4:60944492-60944511 Msa0175110:intron 35.0%
TTGAGGGTCATTTCGTTTAA+GGG + chr1_4:60944493-60944512 Msa0175110:intron 35.0%
TAAAGTGCAAAAGCCCTAAA+AGG + chr1_4:60945366-60945385 Msa0175110:intron 35.0%
! TGGAAGTATGATCTCTCTTA+AGG + chr1_4:60945957-60945976 Msa0175110:exon 35.0%
AAGTATGATCTCTCTTAAGG+AGG + chr1_4:60945960-60945979 Msa0175110:exon 35.0%
TAGATAAGAGCAATGAAGCA+TGG - chr1_4:60946332-60946351 None:intergenic 35.0%
ATCCATTTCTCACATCTATG+TGG - chr1_4:60946415-60946434 None:intergenic 35.0%
GAGCTTTCTCAATACCAAAT+AGG + chr1_4:60946451-60946470 Msa0175110:intron 35.0%
!!! TGAGTTTGTTTTGCCCTATT+TGG - chr1_4:60946468-60946487 None:intergenic 35.0%
!!! GGTGTTGACTTAGAATTTTG+GGG + chr1_4:60946570-60946589 Msa0175110:intron 35.0%
CAACTAAGTAACAAGATGAG+TGG - chr1_4:60947294-60947313 None:intergenic 35.0%
AAGTGATCAAATTGAGGCAA+AGG + chr1_4:60947415-60947434 Msa0175110:intron 35.0%
TTGTGCTATCAAATGCATGT+AGG + chr1_4:60947452-60947471 Msa0175110:intron 35.0%
!! TATATCTTGCCGGTTCATAT+AGG - chr1_4:60947604-60947623 None:intergenic 35.0%
!! TTTCTTACAGGACTAGTTGT+GGG + chr1_4:60948251-60948270 Msa0175110:intron 35.0%
AGAATTGTTCACTCAACATG+TGG - chr1_4:60948443-60948462 None:intergenic 35.0%
ACAATTCTTAGGCCAACATA+CGG + chr1_4:60948455-60948474 Msa0175110:intron 35.0%
ATTAGGACGTCACAGTTATT+TGG - chr1_4:60948526-60948545 None:intergenic 35.0%
TTTCTCATTGAAGATGTTGG+GGG + chr1_4:60948549-60948568 Msa0175110:intron 35.0%
CATGCAGGAAAGGAATTATT+AGG + chr1_4:60948711-60948730 Msa0175110:intron 35.0%
AAGTCGTCCAAAATCACTTA+TGG - chr1_4:60948935-60948954 None:intergenic 35.0%
CCCACTTATTGCCTTATAAT+TGG + chr1_4:60949205-60949224 Msa0175110:intron 35.0%
ATTTGGAGGATAAAACAGAG+TGG + chr1_4:60949311-60949330 Msa0175110:intron 35.0%
GAACAAGAACAAGCAAAACA+AGG - chr1_4:60949599-60949618 None:intergenic 35.0%
TGTAAGGATGAGTATGAGTT+AGG - chr1_4:60949779-60949798 None:intergenic 35.0%
CATACTCATCCTTACAAAAC+CGG + chr1_4:60949783-60949802 Msa0175110:intron 35.0%
! AGTTGGTGTTTGTGAGTATT+TGG + chr1_4:60949885-60949904 Msa0175110:intron 35.0%
TTGTGAGTATTTGGAAACTG+AGG + chr1_4:60949894-60949913 Msa0175110:intron 35.0%
! GAGCTGAAGTGTATATTTTC+TGG + chr1_4:60949934-60949953 Msa0175110:intron 35.0%
!!! GAAGTGTATATTTTCTGGCT+TGG + chr1_4:60949939-60949958 Msa0175110:intron 35.0%
GATCATCATCATCATCATCA+GGG - chr1_4:60950052-60950071 None:intergenic 35.0%
TCATTGTCTGAATCAGTTTC+AGG - chr1_4:60950074-60950093 None:intergenic 35.0%
! GAAACTGATTCAGACAATGA+AGG + chr1_4:60950074-60950093 Msa0175110:CDS 35.0%
TGTGTGATGAATGATGATTC+TGG + chr1_4:60950281-60950300 Msa0175110:intron 35.0%
!! ATGATGATTCTGGTTCAGTT+TGG + chr1_4:60950291-60950310 Msa0175110:intron 35.0%
AATGATGTATCACCATCCAA+CGG - chr1_4:60950504-60950523 None:intergenic 35.0%
! GGGAATCCACAAATTTTGAA+TGG - chr1_4:60950578-60950597 None:intergenic 35.0%
! CGAATATGAGGTTCCATTTT+TGG - chr1_4:60950599-60950618 None:intergenic 35.0%
TTTAGTGTGAAACTTACCCA+AGG - chr1_4:60950978-60950997 None:intergenic 35.0%
TTAAACTTTGATGGAGATGG+AGG - chr1_4:60951485-60951504 None:intergenic 35.0%
GGTTTAAACTTTGATGGAGA+TGG - chr1_4:60951488-60951507 None:intergenic 35.0%
TTCAGTGCTTCATCTATGAT+TGG - chr1_4:60951626-60951645 None:intergenic 35.0%
TGGGACTGAAAAAGATTCAT+CGG + chr1_4:60951817-60951836 Msa0175110:CDS 35.0%
! AAGCTATCTAGAATGGTTAG+TGG + chr1_4:60951875-60951894 Msa0175110:CDS 35.0%
! AGCTATCTAGAATGGTTAGT+GGG + chr1_4:60951876-60951895 Msa0175110:CDS 35.0%
!! TTCTGAGGCAACAAATGTAA+TGG - chr1_4:60951935-60951954 None:intergenic 35.0%
! TTTGTTGCCTCAGAAAGTAT+TGG + chr1_4:60951940-60951959 Msa0175110:CDS 35.0%
! GAGACCAACTTCTTTTAAAC+CGG + chr1_4:60951964-60951983 Msa0175110:CDS 35.0%
! ATCTTGAAGCTTTGATGAAG+AGG + chr1_4:60952074-60952093 Msa0175110:CDS 35.0%
!! GATGGTTGGTATTTTCATCA+CGG + chr1_4:60952135-60952154 Msa0175110:CDS 35.0%
! TTGGTATTTTCATCACGGTA+TGG + chr1_4:60952140-60952159 Msa0175110:CDS 35.0%
! TGGTATTTTCATCACGGTAT+GGG + chr1_4:60952141-60952160 Msa0175110:CDS 35.0%
AACATGAAGGTTTCAACTGT+TGG + chr1_4:60952193-60952212 Msa0175110:CDS 35.0%
! TATGGGCTATATTGGTAACA+AGG + chr1_4:60952225-60952244 Msa0175110:CDS 35.0%
! TCCCTAGAGTTTGTAGTTTT+TGG + chr1_4:60952272-60952291 Msa0175110:intron 35.0%
GACCAAAAACTACAAACTCT+AGG - chr1_4:60952277-60952296 None:intergenic 35.0%
ATGTTCGTGAAATACATCAG+AGG + chr1_4:60952504-60952523 Msa0175110:CDS 35.0%
! CTCATGATCCAAGATACTTT+TGG - chr1_4:60952564-60952583 None:intergenic 35.0%
TGCTGAAATTCTGTATTCAC+TGG + chr1_4:60952807-60952826 Msa0175110:intron 35.0%
TATCATATGGCAAGCTGATA+CGG - chr1_4:60952914-60952933 None:intergenic 35.0%
! TAATGGAAGGGTATATTACC+TGG - chr1_4:60952989-60953008 None:intergenic 35.0%
TCGATGAATTTACTGAGTGA+CGG - chr1_4:60953136-60953155 None:intergenic 35.0%
!!! AGAAAGGTGTTTTTGATGGA+TGG + chr1_4:60953427-60953446 Msa0175110:CDS 35.0%
CGTATTCTATCACATGGAAA+TGG + chr1_4:60953790-60953809 Msa0175110:CDS 35.0%
! TTCATTTTCGATCTCTGCAT+CGG - chr1_4:60953941-60953960 None:intergenic 35.0%
GAAGAAGTCATGACAAGTTT+CGG + chr1_4:60953958-60953977 Msa0175110:CDS 35.0%
TTTAGCAACATAATCTGGAC+AGG + chr1_4:60953990-60954009 Msa0175110:exon 35.0%
ACAAAGCCAATCTATCAACT+AGG - chr1_4:60954313-60954332 None:intergenic 35.0%
TCATCACTTGGAAATTCACA+TGG - chr1_4:60954360-60954379 None:intergenic 35.0%
GTGGTATTTGAATCATCACT+TGG - chr1_4:60954372-60954391 None:intergenic 35.0%
TTCTTCAATCCCTTTCCTCA+TGG + chr1_4:60943952-60943971 Msa0175110:five_prime_UTR 40.0%
CTGACGAAGGAACATATATC+TGG + chr1_4:60944126-60944145 Msa0175110:five_prime_UTR 40.0%
AGATGGTACTCCAGTATAAG+AGG + chr1_4:60944342-60944361 Msa0175110:intron 40.0%
GACCCTCAAATATTGAGAGA+AGG - chr1_4:60944482-60944501 None:intergenic 40.0%
ATAAAGTTGAGGCTCCCTAA+AGG - chr1_4:60945621-60945640 None:intergenic 40.0%
TCATGTTCTACGAAGAAGAG+TGG + chr1_4:60945931-60945950 Msa0175110:intron 40.0%
CACATCTTTAATGTCGGTGA+TGG - chr1_4:60946356-60946375 None:intergenic 40.0%
!! ATCCATTCGGATTGAGTTGA+TGG + chr1_4:60946549-60946568 Msa0175110:intron 40.0%
TCATTATCTTCAACTAGGGG+CGG + chr1_4:60947046-60947065 Msa0175110:intron 40.0%
CTCACCAATATTGTAAGTCC+AGG - chr1_4:60947073-60947092 None:intergenic 40.0%
GTAACAAGATGAGTGGTCAA+TGG - chr1_4:60947287-60947306 None:intergenic 40.0%
TAGCTACTAAATCCCCACAT+CGG + chr1_4:60947353-60947372 Msa0175110:intron 40.0%
CATTTGATGCACAACGTGAA+TGG - chr1_4:60947478-60947497 None:intergenic 40.0%
CATGATCAACGCTTTCTTAC+AGG + chr1_4:60948239-60948258 Msa0175110:intron 40.0%
!! CTTTCTTACAGGACTAGTTG+TGG + chr1_4:60948250-60948269 Msa0175110:intron 40.0%
!! TTCTTACAGGACTAGTTGTG+GGG + chr1_4:60948252-60948271 Msa0175110:intron 40.0%
TTCTCATTGAAGATGTTGGG+GGG + chr1_4:60948550-60948569 Msa0175110:intron 40.0%
GAAAAGTGGCATAAAGCAAC+AGG + chr1_4:60948679-60948698 Msa0175110:intron 40.0%
ATTCCTTTCCTGCATGTGAT+TGG - chr1_4:60948707-60948726 None:intergenic 40.0%
! CTGTGAGCCATAAGTGATTT+TGG + chr1_4:60948925-60948944 Msa0175110:intron 40.0%
ATTTCAGACAGTGATGAAGC+AGG + chr1_4:60949666-60949685 Msa0175110:intron 40.0%
TTTCTTTGTTCAGCCTTGCA+TGG + chr1_4:60949730-60949749 Msa0175110:intron 40.0%
!! TCTTACAAGCCGGTTTTGTA+AGG - chr1_4:60949795-60949814 None:intergenic 40.0%
!! TTACAAAACCGGCTTGTAAG+AGG + chr1_4:60949794-60949813 Msa0175110:intron 40.0%
ATCATCATCATCATCAGGGT+CGG - chr1_4:60950048-60950067 None:intergenic 40.0%
GGATCATCATCATCATCATC+AGG - chr1_4:60950053-60950072 None:intergenic 40.0%
ATAGTCGTCTGCTAATGACA+CGG - chr1_4:60950160-60950179 None:intergenic 40.0%
CATTCATCACACACAAGACA+TGG - chr1_4:60950274-60950293 None:intergenic 40.0%
CAAGACTAGTATAATGCCGT+TGG + chr1_4:60950485-60950504 Msa0175110:intron 40.0%
ACTAGTATAATGCCGTTGGA+TGG + chr1_4:60950489-60950508 Msa0175110:intron 40.0%
GCTCTCAAAAGTCGAATATG+AGG - chr1_4:60950611-60950630 None:intergenic 40.0%
! GGCAAAAGTCATTGACTGTA+AGG + chr1_4:60950729-60950748 Msa0175110:CDS 40.0%
AACAAGAAGGAACTGAGGTT+AGG + chr1_4:60950764-60950783 Msa0175110:intron 40.0%
CAGCAGAATTCAGATATGAG+AGG - chr1_4:60950840-60950859 None:intergenic 40.0%
TTAGAGTATGTGTTGGGACA+TGG + chr1_4:60950872-60950891 Msa0175110:intron 40.0%
CTGCTGATATCTATGTCCTT+GGG + chr1_4:60950959-60950978 Msa0175110:CDS 40.0%
! AAGTTTTCCCATTTCGGTAC+AGG - chr1_4:60951401-60951420 None:intergenic 40.0%
ATATCTGGTGCATCATCTGA+TGG - chr1_4:60951509-60951528 None:intergenic 40.0%
AAGCGATAGTGATATTGGTG+AGG + chr1_4:60951550-60951569 Msa0175110:CDS 40.0%
GTTAGTGGGACTGAAAGAAT+TGG + chr1_4:60951890-60951909 Msa0175110:CDS 40.0%
!! CTGAAAGAATTGGTTTGAGC+TGG + chr1_4:60951900-60951919 Msa0175110:CDS 40.0%
AACAAATGTAATGGTGGCTC+TGG - chr1_4:60951926-60951945 None:intergenic 40.0%
TGAGGCAACAAATGTAATGG+TGG - chr1_4:60951932-60951951 None:intergenic 40.0%
! TGTTCTGAATATGTTTCCGC+AGG - chr1_4:60952177-60952196 None:intergenic 40.0%
AAGGTTTCAACTGTTGGTGT+TGG + chr1_4:60952199-60952218 Msa0175110:CDS 40.0%
!! AACTGTTGGTGTTGGTGTTA+TGG + chr1_4:60952207-60952226 Msa0175110:CDS 40.0%
!! ACTGTTGGTGTTGGTGTTAT+GGG + chr1_4:60952208-60952227 Msa0175110:CDS 40.0%
!! GTTGGTGTTATGGGCTATAT+TGG + chr1_4:60952217-60952236 Msa0175110:CDS 40.0%
CTTTATATGCACCCACCTTA+CGG + chr1_4:60952442-60952461 Msa0175110:CDS 40.0%
!! TGGACTTCCCAAAAGTATCT+TGG + chr1_4:60952553-60952572 Msa0175110:CDS 40.0%
!! CTGCAAATTCTGTTTCTGCT+TGG + chr1_4:60952783-60952802 Msa0175110:intron 40.0%
AAAATTGGTTGAGAGAGACC+AGG + chr1_4:60952968-60952987 Msa0175110:CDS 40.0%
!! GTTTTTGATGGATGGTCAGA+AGG + chr1_4:60953435-60953454 Msa0175110:CDS 40.0%
!! TCTCGTACTTATAGGTTGGT+GGG - chr1_4:60953473-60953492 None:intergenic 40.0%
! ATCTCGTACTTATAGGTTGG+TGG - chr1_4:60953474-60953493 None:intergenic 40.0%
TTCAGACAAGTACATTGGAG+AGG + chr1_4:60953497-60953516 Msa0175110:CDS 40.0%
CAAACTAAAGCATACCATGC+TGG - chr1_4:60953546-60953565 None:intergenic 40.0%
AGAATACGATCGCACCTATA+AGG - chr1_4:60953778-60953797 None:intergenic 40.0%
TGCGATCGTATTCTATCACA+TGG + chr1_4:60953784-60953803 Msa0175110:CDS 40.0%
TGCACCGAAAGTAAAGGTTA+CGG - chr1_4:60954081-60954100 None:intergenic 40.0%
ATATCCTGCACCGAAAGTAA+AGG - chr1_4:60954087-60954106 None:intergenic 40.0%
ACACTTTCTCTCAGTCTCAG+TGG - chr1_4:60944013-60944032 None:intergenic 45.0%
TCAAGTGTCCTTGCAAGCAA+CGG + chr1_4:60944094-60944113 Msa0175110:five_prime_UTR 45.0%
!! GGTTTTGTCTATCTCAGGGT+TGG + chr1_4:60945546-60945565 Msa0175110:intron 45.0%
TCTACGAAGAAGAGTGGCTA+TGG + chr1_4:60945937-60945956 Msa0175110:intron 45.0%
CGCCACATAGATGTGAGAAA+TGG + chr1_4:60946410-60946429 Msa0175110:intron 45.0%
CACCATCAACTCAATCCGAA+TGG - chr1_4:60946554-60946573 None:intergenic 45.0%
CGGACCTGGACTTACAATAT+TGG + chr1_4:60947066-60947085 Msa0175110:intron 45.0%
TTCTGGCCCAAAACAGGTTT+AGG - chr1_4:60948166-60948185 None:intergenic 45.0%
!! AAACCTGTTTTGGGCCAGAA+TGG + chr1_4:60948166-60948185 Msa0175110:intron 45.0%
!! AACCTGTTTTGGGCCAGAAT+GGG + chr1_4:60948167-60948186 Msa0175110:intron 45.0%
!! TCAATGAAGGTACCCCATTC+TGG - chr1_4:60948183-60948202 None:intergenic 45.0%
GGGTACCTTCATTGAATGCT+GGG + chr1_4:60948188-60948207 Msa0175110:intron 45.0%
GGTACCTTCATTGAATGCTG+GGG + chr1_4:60948189-60948208 Msa0175110:intron 45.0%
ATCACACACATCACGACCAT+TGG - chr1_4:60948216-60948235 None:intergenic 45.0%
TCTCATTGAAGATGTTGGGG+GGG + chr1_4:60948551-60948570 Msa0175110:intron 45.0%
AACAGGAACCAATCACATGC+AGG + chr1_4:60948696-60948715 Msa0175110:intron 45.0%
GAACCAATCACATGCAGGAA+AGG + chr1_4:60948701-60948720 Msa0175110:intron 45.0%
GAAACCAAAGACACCGTGAA+AGG - chr1_4:60948899-60948918 None:intergenic 45.0%
TTGACCCGTGATTATAGCCA+CGG + chr1_4:60949181-60949200 Msa0175110:intron 45.0%
! GAGTACCTGTTGTTGCTTGT+TGG - chr1_4:60949710-60949729 None:intergenic 45.0%
AGGATGAGTATGAGTTAGGC+CGG - chr1_4:60949775-60949794 None:intergenic 45.0%
ACACTCATCCTCTTACAAGC+CGG - chr1_4:60949805-60949824 None:intergenic 45.0%
!! GGGACTTGATTTGTGCAAGT+TGG + chr1_4:60949868-60949887 Msa0175110:intron 45.0%
CAACAATGGTCATGCGCAAA+TGG + chr1_4:60949985-60950004 Msa0175110:CDS 45.0%
TTTGGGTGTATTGTGCAGAG+TGG + chr1_4:60950341-60950360 Msa0175110:intron 45.0%
TTGGGTGTATTGTGCAGAGT+GGG + chr1_4:60950342-60950361 Msa0175110:intron 45.0%
TAGTCACCATCTGATTCAGC+CGG - chr1_4:60950409-60950428 None:intergenic 45.0%
TGAACTGCAGAATTTCTCCC+AGG + chr1_4:60950698-60950717 Msa0175110:intron 45.0%
CAGAATTTCTCCCAGGCTTA+AGG + chr1_4:60950705-60950724 Msa0175110:intron 45.0%
AATTTCTCCCAGGCTTAAGG+AGG + chr1_4:60950708-60950727 Msa0175110:CDS 45.0%
! ACTTTTGCCTCCTTAAGCCT+GGG - chr1_4:60950718-60950737 None:intergenic 45.0%
TGTGTTGGGACATGGAATGT+TGG + chr1_4:60950880-60950899 Msa0175110:CDS 45.0%
GGACATAGATATCAGCAGGA+TGG - chr1_4:60950957-60950976 None:intergenic 45.0%
CCAAGGACATAGATATCAGC+AGG - chr1_4:60950961-60950980 None:intergenic 45.0%
CCTGCTGATATCTATGTCCT+TGG + chr1_4:60950958-60950977 Msa0175110:CDS 45.0%
ATACTCGTCCTGTACCGAAA+TGG + chr1_4:60951390-60951409 Msa0175110:CDS 45.0%
TACTCGTCCTGTACCGAAAT+GGG + chr1_4:60951391-60951410 Msa0175110:CDS 45.0%
TGGAGATGGAGGATCACTAA+AGG - chr1_4:60951474-60951493 None:intergenic 45.0%
GGTGAGGAGATTCATCCTTT+AGG + chr1_4:60951566-60951585 Msa0175110:CDS 45.0%
TAGGCTAAATCATTTCCGCG+AGG + chr1_4:60951727-60951746 Msa0175110:CDS 45.0%
TTTCCGCGAGGAAGATTCAT+CGG + chr1_4:60951739-60951758 Msa0175110:CDS 45.0%
TTTCCGATGAATCTTCCTCG+CGG - chr1_4:60951745-60951764 None:intergenic 45.0%
GGTCTCTCCAATACTTTCTG+AGG - chr1_4:60951950-60951969 None:intergenic 45.0%
GAAGATAGTGAGCAAGCAGA+TGG + chr1_4:60952117-60952136 Msa0175110:CDS 45.0%
ATAGTGAGCAAGCAGATGGT+TGG + chr1_4:60952121-60952140 Msa0175110:CDS 45.0%
!! TCCAGAGGAAGGTGTTAATG+CGG - chr1_4:60953041-60953060 None:intergenic 45.0%
ATGAATTGTGCTCCAGAGGA+AGG - chr1_4:60953052-60953071 None:intergenic 45.0%
TCACATGAATTGTGCTCCAG+AGG - chr1_4:60953056-60953075 None:intergenic 45.0%
TGCCATATATGTGGCAGTCA+CGG - chr1_4:60953869-60953888 None:intergenic 45.0%
CTCAACCTCTGCCATATATG+TGG - chr1_4:60953878-60953897 None:intergenic 45.0%
CACATATATGGCAGAGGTTG+AGG + chr1_4:60953876-60953895 Msa0175110:CDS 45.0%
TCATGACAAGTTTCGGCACT+TGG + chr1_4:60953965-60953984 Msa0175110:CDS 45.0%
! GTAACCTTTACTTTCGGTGC+AGG + chr1_4:60954080-60954099 Msa0175110:intron 45.0%
!! CAAAAAAATTAATTATATAT+GGG - chr1_4:60944892-60944911 None:intergenic 5.0%
!! ACAAAAAAATTAATTATATA+TGG - chr1_4:60944893-60944912 None:intergenic 5.0%
!!! TTTTAATATTTTAATGTAAT+AGG - chr1_4:60946016-60946035 None:intergenic 5.0%
!!! ATTAATTAATTTAGTAATTT+TGG + chr1_4:60948873-60948892 Msa0175110:intron 5.0%
!!! TTATTTTATTTATATTTTTC+AGG + chr1_4:60952376-60952395 Msa0175110:intron 5.0%
!!! TATTTTATTTATATTTTTCA+GGG + chr1_4:60952377-60952396 Msa0175110:intron 5.0%
TGTTGCAACCGTTGCTTGCA+AGG - chr1_4:60944105-60944124 None:intergenic 50.0%
GGGAGCCTCAACTTTATGAG+TGG + chr1_4:60945624-60945643 Msa0175110:intron 50.0%
GAGAAAGCTCAACACACGAC+AGG - chr1_4:60946441-60946460 None:intergenic 50.0%
CTTGCAATGTAGCCGATGTG+GGG - chr1_4:60947368-60947387 None:intergenic 50.0%
GCTTGCAATGTAGCCGATGT+GGG - chr1_4:60947369-60947388 None:intergenic 50.0%
AGCTTGCAATGTAGCCGATG+TGG - chr1_4:60947370-60947389 None:intergenic 50.0%
!! TATGTTTGGTGTGGCCCACA+TGG + chr1_4:60947548-60947567 Msa0175110:intron 50.0%
!! ATGTTTGGTGTGGCCCACAT+GGG + chr1_4:60947549-60947568 Msa0175110:intron 50.0%
TCTTAGACCATCCCCCATGT+GGG - chr1_4:60947565-60947584 None:intergenic 50.0%
!! ACCTGTTTTGGGCCAGAATG+GGG + chr1_4:60948168-60948187 Msa0175110:intron 50.0%
! GGGGTACCTTCATTGAATGC+TGG + chr1_4:60948187-60948206 Msa0175110:intron 50.0%
TGGTCCCCAGCATTCAATGA+AGG - chr1_4:60948196-60948215 None:intergenic 50.0%
CATTGAATGCTGGGGACCAA+TGG + chr1_4:60948197-60948216 Msa0175110:intron 50.0%
TGGTTGTGTGCACCGTATGT+TGG - chr1_4:60948470-60948489 None:intergenic 50.0%
CTCATTGAAGATGTTGGGGG+GGG + chr1_4:60948552-60948571 Msa0175110:intron 50.0%
TCATTGAAGATGTTGGGGGG+GGG + chr1_4:60948553-60948572 Msa0175110:intron 50.0%
! TTGGCCTTTCACGGTGTCTT+TGG + chr1_4:60948892-60948911 Msa0175110:intron 50.0%
TGGGTCCGTGGCTATAATCA+CGG - chr1_4:60949189-60949208 None:intergenic 50.0%
TAAGGCAATAAGTGGGTCCG+TGG - chr1_4:60949201-60949220 None:intergenic 50.0%
CACAGCCAACAAGCAACAAC+AGG + chr1_4:60949702-60949721 Msa0175110:CDS 50.0%
TGGGTGTATTGTGCAGAGTG+GGG + chr1_4:60950343-60950362 Msa0175110:intron 50.0%
! GACTTTTGCCTCCTTAAGCC+TGG - chr1_4:60950719-60950738 None:intergenic 50.0%
GTTGGGACATGGAATGTTGG+AGG + chr1_4:60950883-60950902 Msa0175110:CDS 50.0%
TCATCACGGTATGGGTTCGA+AGG + chr1_4:60952149-60952168 Msa0175110:CDS 50.0%
! CTTTTCACCTGCCGTAAGGT+GGG - chr1_4:60952456-60952475 None:intergenic 50.0%
! CTTCCTTTTCACCTGCCGTA+AGG - chr1_4:60952460-60952479 None:intergenic 50.0%
ACCGCATTAACACCTTCCTC+TGG + chr1_4:60953037-60953056 Msa0175110:intron 50.0%
GTACATTGGAGAGGACCCAA+AGG + chr1_4:60953506-60953525 Msa0175110:CDS 50.0%
ACCCGTGACTGCCACATATA+TGG + chr1_4:60953864-60953883 Msa0175110:CDS 50.0%
GCCATATATGTGGCAGTCAC+GGG - chr1_4:60953868-60953887 None:intergenic 50.0%
GACTGCCACATATATGGCAG+AGG + chr1_4:60953870-60953889 Msa0175110:CDS 50.0%
AGTGCTCGCTGTAGCTTCTT+TGG - chr1_4:60953910-60953929 None:intergenic 50.0%
ACGGTTGCAACAGCTGACGA+AGG + chr1_4:60944113-60944132 Msa0175110:five_prime_UTR 55.0%
!! TGTTTGGTGTGGCCCACATG+GGG + chr1_4:60947550-60947569 Msa0175110:intron 55.0%
CTCTTAGACCATCCCCCATG+TGG - chr1_4:60947566-60947585 None:intergenic 55.0%
CACATGGGGGATGGTCTAAG+AGG + chr1_4:60947564-60947583 Msa0175110:intron 55.0%
ACCCCATTCTGGCCCAAAAC+AGG - chr1_4:60948172-60948191 None:intergenic 55.0%
CATTGAAGATGTTGGGGGGG+GGG + chr1_4:60948554-60948573 Msa0175110:intron 55.0%
ATTGAAGATGTTGGGGGGGG+GGG + chr1_4:60948555-60948574 Msa0175110:intron 55.0%
GGGTCCGTGGCTATAATCAC+GGG - chr1_4:60949188-60949207 None:intergenic 55.0%
ATTGTGCAGAGTGGGGAAGC+CGG + chr1_4:60950350-60950369 Msa0175110:intron 55.0%
TCCTGTCCCTAATCCGTGAC+CGG - chr1_4:60950372-60950391 None:intergenic 55.0%
!! ACGGATTAGGGACAGGAGAG+AGG + chr1_4:60950375-60950394 Msa0175110:CDS 55.0%
CAGGAGAGAGGATGAAGCTC+CGG + chr1_4:60950387-60950406 Msa0175110:CDS 55.0%
GAAGCTCCGGCTGAATCAGA+TGG + chr1_4:60950400-60950419 Msa0175110:CDS 55.0%
TATGGGTTCGAAGGAGCCTG+CGG + chr1_4:60952158-60952177 Msa0175110:CDS 55.0%
ATATGCACCCACCTTACGGC+AGG + chr1_4:60952446-60952465 Msa0175110:CDS 55.0%
! CCTTTTCACCTGCCGTAAGG+TGG - chr1_4:60952457-60952476 None:intergenic 55.0%
CCACCTTACGGCAGGTGAAA+AGG + chr1_4:60952454-60952473 Msa0175110:CDS 55.0%
GTGTACGCCTCGCAACCTTT+GGG - chr1_4:60953524-60953543 None:intergenic 55.0%
ATGTGGCAGTCACGGGTCTA+TGG - chr1_4:60953861-60953880 None:intergenic 55.0%
TCTTCAACTAGGGGCGGACC+TGG + chr1_4:60947052-60947071 Msa0175110:intron 60.0%
!! GTTTGGTGTGGCCCACATGG+GGG + chr1_4:60947551-60947570 Msa0175110:intron 60.0%
! GGGAAGCCGGTCACGGATTA+GGG + chr1_4:60950363-60950382 Msa0175110:CDS 60.0%
GAGAGGACCCAAAGGTTGCG+AGG + chr1_4:60953514-60953533 Msa0175110:CDS 60.0%
GGTGTACGCCTCGCAACCTT+TGG - chr1_4:60953525-60953544 None:intergenic 60.0%
TTGCGAGGCGTACACCAGCA+TGG + chr1_4:60953529-60953548 Msa0175110:CDS 60.0%
AGATGTTGGGGGGGGGGGTA+TGG + chr1_4:60948560-60948579 Msa0175110:intron 65.0%
CAGAGTGGGGAAGCCGGTCA+CGG + chr1_4:60950356-60950375 Msa0175110:intron 65.0%
GGGGAAGCCGGTCACGGATT+AGG + chr1_4:60950362-60950381 Msa0175110:CDS 65.0%
!! GCCGGTCACGGATTAGGGAC+AGG + chr1_4:60950368-60950387 Msa0175110:CDS 65.0%
GGTGTGGCCCACATGGGGGA+TGG + chr1_4:60947555-60947574 Msa0175110:intron 70.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 60943943 60954462 60943943 ID=Msa0175110;Name=Msa0175110
chr1_4 mRNA 60943943 60954462 60943943 ID=Msa0175110-mRNA-1;Parent=Msa0175110;Name=Msa0175110-mRNA-1;_AED=0.11;_eAED=0.11;_QI=220|0.84|0.78|0.92|0.76|0.64|14|430|676
chr1_4 exon 60943943 60944147 60943943 ID=Msa0175110-mRNA-1:exon:19400;Parent=Msa0175110-mRNA-1
chr1_4 exon 60945949 60945981 60945949 ID=Msa0175110-mRNA-1:exon:19401;Parent=Msa0175110-mRNA-1
chr1_4 exon 60949673 60949723 60949673 ID=Msa0175110-mRNA-1:exon:19402;Parent=Msa0175110-mRNA-1
chr1_4 exon 60949975 60950095 60949975 ID=Msa0175110-mRNA-1:exon:19403;Parent=Msa0175110-mRNA-1
chr1_4 exon 60950172 60950210 60950172 ID=Msa0175110-mRNA-1:exon:19404;Parent=Msa0175110-mRNA-1
chr1_4 exon 60950359 60950421 60950359 ID=Msa0175110-mRNA-1:exon:19405;Parent=Msa0175110-mRNA-1
chr1_4 exon 60950708 60950780 60950708 ID=Msa0175110-mRNA-1:exon:19406;Parent=Msa0175110-mRNA-1
chr1_4 exon 60950876 60950980 60950876 ID=Msa0175110-mRNA-1:exon:19407;Parent=Msa0175110-mRNA-1
chr1_4 exon 60951340 60952246 60951340 ID=Msa0175110-mRNA-1:exon:19408;Parent=Msa0175110-mRNA-1
chr1_4 exon 60952398 60952582 60952398 ID=Msa0175110-mRNA-1:exon:19409;Parent=Msa0175110-mRNA-1
chr1_4 exon 60952881 60952989 60952881 ID=Msa0175110-mRNA-1:exon:19410;Parent=Msa0175110-mRNA-1
chr1_4 exon 60953411 60953550 60953411 ID=Msa0175110-mRNA-1:exon:19411;Parent=Msa0175110-mRNA-1
chr1_4 exon 60953783 60954068 60953783 ID=Msa0175110-mRNA-1:exon:19412;Parent=Msa0175110-mRNA-1
chr1_4 exon 60954099 60954462 60954099 ID=Msa0175110-mRNA-1:exon:19413;Parent=Msa0175110-mRNA-1
chr1_4 five_prime_UTR 60943943 60944147 60943943 ID=Msa0175110-mRNA-1:five_prime_utr;Parent=Msa0175110-mRNA-1
chr1_4 five_prime_UTR 60945949 60945963 60945949 ID=Msa0175110-mRNA-1:five_prime_utr;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60945964 60945981 60945964 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60949673 60949723 60949673 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60949975 60950095 60949975 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60950172 60950210 60950172 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60950359 60950421 60950359 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60950708 60950780 60950708 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60950876 60950980 60950876 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60951340 60952246 60951340 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60952398 60952582 60952398 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60952881 60952989 60952881 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60953411 60953550 60953411 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 CDS 60953783 60954002 60953783 ID=Msa0175110-mRNA-1:cds;Parent=Msa0175110-mRNA-1
chr1_4 three_prime_UTR 60954003 60954068 60954003 ID=Msa0175110-mRNA-1:three_prime_utr;Parent=Msa0175110-mRNA-1
chr1_4 three_prime_UTR 60954099 60954462 60954099 ID=Msa0175110-mRNA-1:three_prime_utr;Parent=Msa0175110-mRNA-1
Gene Sequence

>Msa0175110

ATGATCTCTCTTAAGGAGACAGTGATGAAGCAGGAACAGCAGAAGCACACAGCCAACAAGCAACAACAGAATTTATGGGCAACAATGGTCATGCGCAAATGGCTTAACATTAAAAGGAAGGAGTCTGATGATTACAGCACCGACCCTGATGATGATGATGATGATCCTGAAACTGATTCAGACAATGAAGACGACTATTCATTTGAAGATTTGGAAATTGAGGATTATGAGTGGGGAAGCCGGTCACGGATTAGGGACAGGAGAGAGGATGAAGCTCCGGCTGAATCAGATGAATTTCTCCCAGGCTTAAGGAGGCAAAAGTCATTGACTGTAAGGTCTCAATATATAAACAAGAAGGAACTGAGAGTATGTGTTGGGACATGGAATGTTGGAGGAAAACTTCCACGTAATGACTTTGATATTGATGATTGGCTAGACATTAACCATCCTGCTGATATCTATGTCCTTGGTCTTCAAGAGATTGTACCTTTAAACACGAGTAACATTTTTGTTGCTGTAGATACTCGTCCTGTACCGAAATGGGAAAACTTAATTCGAGAAGCTCTGAATAGAGTTCGATCAAAACCTTCAAAGATAAAATCCTTTAGTGATCCTCCATCTCCATCAAAGTTTAAACCATCAGATGATGCACCAGATATAGAAGAAGAAATTCTATTAGAAAGCGATAGTGATATTGGTGAGGAGATTCATCCTTTAGGTGAAGAACATAATTTATTTGGAGTCACAGATAAACCAATCATAGATGAAGCACTGAATATTAGTTTGAAGGATTCAAATGCTTCTGATATAGCTGAGAACGATCTACAGAATCAGTTATCTTATCAAAGAAGGTTGAATAGGCTAAATCATTTCCGCGAGGAAGATTCATCGGAAAACAATGAAACAACTTCTTCTCAACAGATTAGTAAGCTATCTAGAATGATTAATGGGACTGAAAAAGATTCATCGGAAAACAATGAAACGACTTCTTCTCAACAGATTAGTAAGCTATCTAGAATGGTTAGTGGGACTGAAAGAATTGGTTTGAGCTGGCCAGAGCCACCATTACATTTGTTGCCTCAGAAAGTATTGGAGAGACCAACTTCTTTTAAACCGGTTAAATCGTTTAATAAGACAAAGTCATTTAGAGCCTGTGATTCTTTCAAATCAAAAACAGATGCTATAGATTTACTGGCTGATATTGATCTTGAAGCTTTGATGAAGAGGAAAACAAGATCGTCGTATGTGAAGATAGTGAGCAAGCAGATGGTTGGTATTTTCATCACGGTATGGGTTCGAAGGAGCCTGCGGAAACATATTCAGAACATGAAGGTTTCAACTGTTGGTGTTGGTGTTATGGGCTATATTGGTAACAAGGGATCAATATCTGTCAGCATGTCTATTTATCAGACGCTTTTTTGCTTTATATGCACCCACCTTACGGCAGGTGAAAAGGAAGCCGATGAAATCAAACGAAATGCTGATGTTCGTGAAATACATCAGAGGACCCATTTTTATTCACTTTCTGATTTTGGACTTCCCAAAAGTATCTTGGATCATGAAAGAATAATTTGGTTCGGTGATCTGAATTACCGTATCAGCTTGCCATATGATAAAACAAGAGATCTTATCTCAAAAAAGCATTGGTCAAAATTGGTTGAGAGAGACCAGCTTGTGAAAGAATTAGAGAAAGGTGTTTTTGATGGATGGTCAGAAGGTGCGTTAAACTTCCCACCAACCTATAAGTACGAGATTAATTCAGACAAGTACATTGGAGAGGACCCAAAGGTTGCGAGGCGTACACCAGCATGGTGCGATCGTATTCTATCACATGGAAATGGAATGAGATTACTGAGTTACAAAAGGAGTGAACTTAAATTTTCAGACCATAGACCCGTGACTGCCACATATATGGCAGAGGTTGAGGTGTTCAATCCAAAGAAGCTACAGCGAGCACTTAATTACACCGATGCAGAGATCGAAAATGAAGAAGTCATGACAAGTTTCGGCACTTGGAATTTAGCAACATAA
Protein sequence

>Msa0175110

MISLKETVMKQEQQKHTANKQQQNLWATMVMRKWLNIKRKESDDYSTDPDDDDDDPETDSDNEDDYSFEDLEIEDYEWGSRSRIRDRREDEAPAESDEFLPGLRRQKSLTVRSQYINKKELRVCVGTWNVGGKLPRNDFDIDDWLDINHPADIYVLGLQEIVPLNTSNIFVAVDTRPVPKWENLIREALNRVRSKPSKIKSFSDPPSPSKFKPSDDAPDIEEEILLESDSDIGEEIHPLGEEHNLFGVTDKPIIDEALNISLKDSNASDIAENDLQNQLSYQRRLNRLNHFREEDSSENNETTSSQQISKLSRMINGTEKDSSENNETTSSQQISKLSRMVSGTERIGLSWPEPPLHLLPQKVLERPTSFKPVKSFNKTKSFRACDSFKSKTDAIDLLADIDLEALMKRKTRSSYVKIVSKQMVGIFITVWVRRSLRKHIQNMKVSTVGVGVMGYIGNKGSISVSMSIYQTLFCFICTHLTAGEKEADEIKRNADVREIHQRTHFYSLSDFGLPKSILDHERIIWFGDLNYRISLPYDKTRDLISKKHWSKLVERDQLVKELEKGVFDGWSEGALNFPPTYKYEINSDKYIGEDPKVARRTPAWCDRILSHGNGMRLLSYKRSELKFSDHRPVTATYMAEVEVFNPKKLQRALNYTDAEIENEEVMTSFGTWNLAT*