AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0152550

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0152550 MtrunA17_Chr1g0161471 95.255 1117 52 1 1 1116 1 1117 0.0 2184
Msa0152550 MtrunA17_Chr1g0161491 84.375 1120 165 5 1 1116 15 1128 0.0 1934
Msa0152550 MtrunA17_Chr1g0161521 82.679 1120 187 3 1 1116 1 1117 0.0 1871
Msa0152550 MtrunA17_Chr1g0161511 82.620 1122 185 4 1 1116 1 1118 0.0 1869
Msa0152550 MtrunA17_Chr1g0161451 54.359 1124 468 11 5 1102 3 1107 0.0 1221
Msa0152550 MtrunA17_Chr4g0059271 38.543 1139 630 21 3 1097 7 1119 0.0 756
Msa0152550 MtrunA17_Chr3g0137841 36.372 1130 627 22 51 1107 81 1191 0.0 610
Msa0152550 MtrunA17_Chr4g0059261 55.294 85 38 0 851 935 1 85 8.24e-24 99.0
Msa0152550 MtrunA17_Chr6g0486821 21.797 679 386 29 480 1064 300 927 1.43e-13 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0152550 AT1G14790.1 61.394 1119 409 10 5 1115 3 1106 0.0 1369
Msa0152550 AT4G11130.1 38.354 1142 622 22 6 1098 11 1119 0.0 742
Msa0152550 AT3G49500.3 36.287 1072 586 27 100 1099 130 1176 1.72e-175 548
Msa0152550 AT3G49500.4 36.287 1072 586 27 100 1099 130 1176 1.72e-175 548
Msa0152550 AT3G49500.1 36.287 1072 586 27 100 1099 130 1176 1.72e-175 548
Msa0152550 AT3G49500.2 36.287 1072 586 27 100 1099 130 1176 1.72e-175 548
Msa0152550 AT3G49500.5 36.287 1072 586 27 100 1099 130 1176 1.72e-175 548
Msa0152550 AT2G19930.2 25.111 677 382 28 365 947 201 846 3.13e-28 123
Msa0152550 AT2G19930.3 25.111 677 382 28 365 947 195 840 3.44e-28 123
Msa0152550 AT2G19930.1 25.354 635 351 26 406 947 242 846 3.92e-27 120
Msa0152550 AT2G19910.2 25.667 600 320 24 436 935 265 838 1.33e-23 108
Msa0152550 AT2G19910.1 25.452 609 319 25 436 935 265 847 5.59e-22 103

Find 252 sgRNAs with CRISPR-Local

Find 353 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGATGTTAGAGTTGATTT+TGG 0.118507 1_4:-15359940 Msa0152550:CDS
CAATGATGCTGCAGACATTT+AGG 0.140329 1_4:-15357873 Msa0152550:CDS
TTTCTTCTCCTATCCTATTT+AGG 0.157937 1_4:-15360346 Msa0152550:five_prime_UTR
CATGGAATTCGACGGCTTTA+TGG 0.160512 1_4:-15356233 Msa0152550:CDS
CTCTTCTGTTTGTAGTTAAT+TGG 0.176066 1_4:-15359422 Msa0152550:intron
CCCATCATTGCTCTTCCTTT+TGG 0.190630 1_4:+15357805 None:intergenic
AGCTTTCATATGAGAATATT+TGG 0.191630 1_4:-15359858 Msa0152550:CDS
GTTCAGCACGGGTGTCTTTC+AGG 0.203501 1_4:-15359050 Msa0152550:CDS
CAACACAGATTTGGATGTTT+TGG 0.216117 1_4:-15358139 Msa0152550:CDS
CTTAGAAATGGCATAGTTAT+TGG 0.221122 1_4:-15358603 Msa0152550:CDS
AGTCTTTCTCATGTAGTTAA+TGG 0.233808 1_4:-15357712 Msa0152550:CDS
TCCCAACTTGTAGTCATAAT+TGG 0.235213 1_4:+15356180 None:intergenic
GATGATGTGAAACTGTATTT+TGG 0.243659 1_4:-15360006 Msa0152550:CDS
TTCTATGCCGTCTGCCTTCC+AGG 0.246185 1_4:-15358256 Msa0152550:CDS
TGGCTTTCTCCTTCTTGATT+TGG 0.249778 1_4:+15355843 None:intergenic
GAAAGAAATGGTTCAACATT+AGG 0.258974 1_4:+15357895 None:intergenic
CGCATCCGCATCCCTTCTTT+TGG 0.261948 1_4:+15356078 None:intergenic
TCCATCAGAGAAGACATATT+TGG 0.262792 1_4:+15358335 None:intergenic
GGGACATCTACTTTGTTTGC+TGG 0.273457 1_4:-15357078 Msa0152550:CDS
GCTAGACTTGGACAATCTTT+TGG 0.274423 1_4:-15358426 Msa0152550:CDS
AATGATGCTGCAGACATTTA+GGG 0.280438 1_4:-15357872 Msa0152550:CDS
TCAATAAAATAGTTCTTAAA+AGG 0.281207 1_4:+15359335 None:intergenic
TACAAAGTATCTATTGATTC+AGG 0.289065 1_4:-15359803 Msa0152550:intron
TTGTTCAATATTCTAACAAT+AGG 0.290114 1_4:-15357741 Msa0152550:CDS
ATTTAGGGCCTTAAAACTTT+TGG 0.292132 1_4:-15357857 Msa0152550:CDS
GACAAAGGCACACGAGGTTT+TGG 0.296117 1_4:-15357980 Msa0152550:CDS
TGCAAATGCTGTTCGATTAC+GGG 0.303122 1_4:+15360182 None:intergenic
TATGTCTTCTCTGATGGAAT+TGG 0.304418 1_4:-15358330 Msa0152550:CDS
ATCTCCCATCCATTCCCTTA+TGG 0.306555 1_4:+15358482 None:intergenic
ACAATCGTTGAGTATGTAAT+TGG 0.310788 1_4:+15356570 None:intergenic
ACTTACCATCATAGTTACTA+TGG 0.312137 1_4:-15355935 Msa0152550:CDS
ACATTCTTTGATTTGTAGAT+AGG 0.317451 1_4:+15356355 None:intergenic
ACATCCAGATTGCAAGAAAA+AGG 0.321672 1_4:+15359140 None:intergenic
TTCACTCCATGCAGTTGTAT+TGG 0.328472 1_4:-15359278 Msa0152550:CDS
TTGCAAATGCTGTTCGATTA+CGG 0.331468 1_4:+15360181 None:intergenic
CGATTCAGACAACACAGATT+TGG 0.332074 1_4:-15358148 Msa0152550:CDS
CCCACTTAGGATTTCTGCTT+CGG 0.354344 1_4:+15356129 None:intergenic
GAAACTAGAACCCTAGAATA+TGG 0.354957 1_4:-15357772 Msa0152550:CDS
TACAAATCAAAGAATGTAAT+AGG 0.356384 1_4:-15356349 Msa0152550:CDS
TCGGTCACCGACTATATCTT+TGG 0.360311 1_4:-15358859 Msa0152550:CDS
TCACTCCATGCAGTTGTATT+GGG 0.361526 1_4:-15359277 Msa0152550:CDS
AGCTCAACATTCTTTCTAGT+TGG 0.365437 1_4:+15358990 None:intergenic
GCTGCTGACCGTTGTAGTTT+CGG 0.366080 1_4:+15358395 None:intergenic
TCACTTCCCGAACATTCATT+TGG 0.366423 1_4:+15357109 None:intergenic
CTATTTAAAAGTTCGGGAAA+TGG 0.367680 1_4:-15360073 Msa0152550:CDS
GTACGGATCCATTGGTCATC+AGG 0.370357 1_4:+15359308 None:intergenic
CAATAACTATGCCATTTCTA+AGG 0.379543 1_4:+15358604 None:intergenic
TTCTGCCAAACCTATTGTAT+TGG 0.383278 1_4:-15357008 Msa0152550:CDS
TGCCGTCTGCCTTCCAGGTT+CGG 0.385299 1_4:-15358251 Msa0152550:CDS
AACTCCTCGCCTCTTTCCTT+AGG 0.391172 1_4:+15356035 None:intergenic
CTTGTTTAAAGTTAATTCAT+TGG 0.391465 1_4:-15359072 Msa0152550:CDS
GGAGCTCCTATTTAAAAGTT+CGG 0.391789 1_4:-15360080 Msa0152550:CDS
ACCACATCCAAATGAATGTT+CGG 0.396067 1_4:-15357116 Msa0152550:CDS
TATATCTTTGGATAACGGTT+TGG 0.400522 1_4:-15358847 Msa0152550:CDS
ATTCTTTCCATCCTTAGAAA+TGG 0.402135 1_4:-15358615 Msa0152550:CDS
CACAGAATATCCAGATTTCA+TGG 0.402831 1_4:-15356392 Msa0152550:CDS
GAGCTCCTATTTAAAAGTTC+GGG 0.414378 1_4:-15360079 Msa0152550:CDS
TGTAGTTAATTGGTGCTCCT+CGG 0.416981 1_4:-15359412 Msa0152550:intron
GGCGGGGCTGATGTAGATGC+TGG 0.423579 1_4:-15356001 Msa0152550:CDS
TGTTCAATATTCTAACAATA+GGG 0.424933 1_4:-15357740 Msa0152550:CDS
ACCATGGAAAGCTTAGAAAA+TGG 0.431302 1_4:+15355885 None:intergenic
ACATCATGATCCAATACAAT+AGG 0.434504 1_4:+15356998 None:intergenic
GTAGTTAATTGGTGCTCCTC+GGG 0.436292 1_4:-15359411 Msa0152550:intron
ATGTTTGCTCGTACACCAAC+TGG 0.437310 1_4:-15358519 Msa0152550:CDS
TCCAAAAGGAAGAGCAATGA+TGG 0.437443 1_4:-15357806 Msa0152550:CDS
GGACATCTACTTTGTTTGCT+GGG 0.438611 1_4:-15357077 Msa0152550:CDS
ACTTTAAACAAGATGTCAAA+TGG 0.439714 1_4:+15359083 None:intergenic
ACCAATTATGACTACAAGTT+GGG 0.440195 1_4:-15356181 Msa0152550:CDS
AGTAAAACAGTTGAGCTGTA+TGG 0.440670 1_4:-15360303 Msa0152550:CDS
ATGTCTTCTCTGATGGAATT+GGG 0.442636 1_4:-15358329 Msa0152550:CDS
ATGATCCAATACAATAGGTT+TGG 0.443886 1_4:+15357003 None:intergenic
TGCAGCATCATTGAAAGAAA+TGG 0.444498 1_4:+15357883 None:intergenic
CCGACTATATCTTTGGATAA+CGG 0.446812 1_4:-15358852 Msa0152550:CDS
GTTTGTCACCATTGCAGTAC+GGG 0.454323 1_4:-15360101 Msa0152550:CDS
ACTAGGATATTTATTCCAAA+AGG 0.454891 1_4:-15357820 Msa0152550:CDS
AATTCAAGGTATTTCAACTA+AGG 0.456722 1_4:-15356311 Msa0152550:CDS
ACCAAATATGTCTTCTCTGA+TGG 0.456825 1_4:-15358336 Msa0152550:CDS
TCTTGATTTGGACAAGCAAA+TGG 0.456873 1_4:+15355855 None:intergenic
AGGTATTTCTGCTGGGATAC+CGG 0.459811 1_4:+15356429 None:intergenic
GGATGCGGATGCGATTACTA+TGG 0.463056 1_4:-15356068 Msa0152550:CDS
CCACATCCAAATGAATGTTC+GGG 0.464069 1_4:-15357115 Msa0152550:CDS
TTCTCATGTAGTTAATGGTA+AGG 0.466581 1_4:-15357707 Msa0152550:CDS
CCTTCCAGGTTCGGTATGGC+GGG 0.467656 1_4:-15358242 Msa0152550:CDS
CTGATCTTTCAGCCATCTCA+CGG 0.468798 1_4:+15358914 None:intergenic
TACTATGGTTTGTACAATGA+AGG 0.470404 1_4:-15355920 Msa0152550:CDS
AGATTTGTAGAGCAGTATAC+TGG 0.471303 1_4:-15360246 Msa0152550:CDS
CAAAATCTTTCACCAAAAGA+AGG 0.471883 1_4:-15356090 Msa0152550:CDS
AACCAATTATGACTACAAGT+TGG 0.472437 1_4:-15356182 Msa0152550:CDS
GCTAAATATGCTGCTAGACT+TGG 0.472983 1_4:-15358438 Msa0152550:CDS
GAGATACCGCTGGATCCATA+AGG 0.474376 1_4:-15358497 Msa0152550:CDS
CCCGAACATTCATTTGGATG+TGG 0.475636 1_4:+15357115 None:intergenic
ACTCCTCGCCTCTTTCCTTA+GGG 0.475778 1_4:+15356036 None:intergenic
AACTATGCCATTTCTAAGGA+TGG 0.476554 1_4:+15358608 None:intergenic
CTGAAGGAGATGCTTATTTG+TGG 0.476713 1_4:-15357925 Msa0152550:CDS
ACATCACCTGGGTGCAAGCA+CGG 0.476835 1_4:+15357667 None:intergenic
AAATATCTCTTGAACTTGCC+AGG 0.478082 1_4:-15358305 Msa0152550:CDS
TGTACCCGCCATACCGAACC+TGG 0.478634 1_4:+15358238 None:intergenic
TACATACTCAACGATTGTCT+TGG 0.479387 1_4:-15356565 Msa0152550:CDS
TTCAAAACACGAACATCACC+TGG 0.479689 1_4:+15357655 None:intergenic
TTAGATTGACATCATTTACT+TGG 0.479691 1_4:-15360418 Msa0152550:five_prime_UTR
GTCCCCATGGTTGCTCCTCA+AGG 0.480760 1_4:-15359116 Msa0152550:CDS
AGACGACGAGGTATTTCTGC+TGG 0.480811 1_4:+15356421 None:intergenic
AGAAAAGATGTACTATTCAA+AGG 0.481118 1_4:-15358952 Msa0152550:CDS
TTCGTTTGTTGACGAGGAGT+TGG 0.481183 1_4:-15358706 Msa0152550:CDS
GGAAATCTGATGGACTACTA+TGG 0.482352 1_4:-15356160 Msa0152550:CDS
CAAGGTATTTCAACTAAGGA+TGG 0.483688 1_4:-15356307 Msa0152550:CDS
CATCACCTGGGTGCAAGCAC+GGG 0.486653 1_4:+15357668 None:intergenic
GGAGTTGGTTCAATGACGGC+GGG 0.487219 1_4:-15356018 Msa0152550:CDS
GCCTTCCAGGTTCGGTATGG+CGG 0.487625 1_4:-15358243 Msa0152550:CDS
AAGCCGTCGAATTCCATGTC+TGG 0.489157 1_4:+15356238 None:intergenic
CGATTTGAGACATTGATCTC+TGG 0.490515 1_4:+15358774 None:intergenic
ACGGTTTGGTATATGTTCGC+AGG 0.491682 1_4:-15358833 Msa0152550:CDS
GCTCGAATGCATCCTCATCC+TGG 0.493536 1_4:+15355823 None:intergenic
AAACAACACAATCCACCATA+TGG 0.494194 1_4:+15357608 None:intergenic
TGTGCCAGCTTTGCGCCATA+TGG 0.496691 1_4:-15357623 Msa0152550:CDS
AGGTTCTTTGTCTGCAAAGA+CGG 0.496746 1_4:+15356522 None:intergenic
GTTTGAATGTCTTATTGTCA+TGG 0.500412 1_4:+15359884 None:intergenic
TTGGGATTGGAATGAGAAAG+TGG 0.506648 1_4:-15359921 Msa0152550:CDS
TCTACAAATCTCTTTACATC+AGG 0.508391 1_4:+15360258 None:intergenic
AGATCATGCTACAGATATGA+TGG 0.508791 1_4:-15360139 Msa0152550:CDS
GATTGAGCTGCATCAGCCAC+GGG 0.510977 1_4:-15359833 Msa0152550:CDS
TCCACCATATGGCGCAAAGC+TGG 0.512736 1_4:+15357619 None:intergenic
TCAGGCACGGTCACATAATG+AGG 0.513553 1_4:+15360276 None:intergenic
TTTATCTTCACGTATTTCCG+TGG 0.516397 1_4:-15358664 Msa0152550:CDS
TGGAACAAAGTTTCAGTCGC+AGG 0.517680 1_4:-15355799 Msa0152550:CDS
TGGATCCATAAGGGAATGGA+TGG 0.518554 1_4:-15358487 Msa0152550:CDS
GAGATATTGTTCCAAGGCCA+AGG 0.519330 1_4:-15360047 Msa0152550:CDS
GACCGTTGTAGTTTCGGTAG+AGG 0.520868 1_4:+15358401 None:intergenic
GATCCACTCTCCAATGTGTA+TGG 0.521155 1_4:+15359164 None:intergenic
TATTTAGGAAAATCAAAAGA+TGG 0.522810 1_4:-15360331 Msa0152550:exon
GTTCGGGAAGTGATCTTGAT+GGG 0.522949 1_4:-15357099 Msa0152550:CDS
TACATCCTTCACACTTGAAG+TGG 0.526578 1_4:-15356278 Msa0152550:CDS
GTCTTTGCAGACAAAGAACC+TGG 0.526811 1_4:-15356520 Msa0152550:CDS
TTGGCAGAATCATACTCCAT+TGG 0.527097 1_4:+15357022 None:intergenic
CTATGGCTGTAAGGTCCCTA+AGG 0.529617 1_4:-15356051 Msa0152550:CDS
TACGGATCCATTGGTCATCA+GGG 0.530740 1_4:+15359309 None:intergenic
ATGAAATCTGGATATTCTGT+GGG 0.530843 1_4:+15356394 None:intergenic
CTTCACACTTGAAGTGGCTA+AGG 0.531272 1_4:-15356272 Msa0152550:CDS
AGAAGGAGAAAGCCAGGATG+AGG 0.535312 1_4:-15355835 Msa0152550:CDS
CTACAAGTTGGGAAATCTGA+TGG 0.542458 1_4:-15356170 Msa0152550:CDS
ATGCGATTACTATGGCTGTA+AGG 0.542526 1_4:-15356060 Msa0152550:CDS
AATCTATTGTACGGATCCAT+TGG 0.543493 1_4:+15359300 None:intergenic
TAAGGAAAGAGGCGAGGAGT+TGG 0.543723 1_4:-15356033 Msa0152550:CDS
CATGAAATCTGGATATTCTG+TGG 0.544047 1_4:+15356393 None:intergenic
TCTGCCTTCCAGGTTCGGTA+TGG 0.544848 1_4:-15358246 Msa0152550:CDS
GCTCATTACGAGGAAAGTGC+GGG 0.545255 1_4:-15359188 Msa0152550:CDS
GTTCGGTATGGCGGGTACAA+AGG 0.545736 1_4:-15358234 Msa0152550:CDS
ACGTGTTTCGTTTGTTGACG+AGG 0.550365 1_4:-15358712 Msa0152550:CDS
ACCTCGAACAATTGATCCAA+TGG 0.552767 1_4:-15357038 Msa0152550:CDS
AAATCAAGAAGGAGAAAGCC+AGG 0.553320 1_4:-15355841 Msa0152550:CDS
AGTTTGTCACCATTGCAGTA+CGG 0.554616 1_4:-15360102 Msa0152550:CDS
TGCTCATTACGAGGAAAGTG+CGG 0.556984 1_4:-15359189 Msa0152550:CDS
CTTATGCAAAAGCTTCTGCT+TGG 0.557765 1_4:-15355967 Msa0152550:CDS
CAATCTGGATGTTGTCCCCA+TGG 0.558090 1_4:-15359129 Msa0152550:CDS
GTTAATTCATTGGTTCAGCA+CGG 0.559458 1_4:-15359062 Msa0152550:CDS
AGATACCGCTGGATCCATAA+GGG 0.559980 1_4:-15358496 Msa0152550:CDS
TGCAAAGACGGTGTGTGCAT+TGG 0.560064 1_4:+15356534 None:intergenic
TTATATGCATCATCTGAAGT+AGG 0.561230 1_4:+15359371 None:intergenic
TGTTCGGGAAGTGATCTTGA+TGG 0.561954 1_4:-15357100 Msa0152550:CDS
CCACAAAAGTATACTTTGCA+AGG 0.563345 1_4:+15358798 None:intergenic
CTTATCCACTCTTGATGTCA+AGG 0.563615 1_4:-15358067 Msa0152550:CDS
CCGCTGGATCCATAAGGGAA+TGG 0.564392 1_4:-15358491 Msa0152550:CDS
AAAATCTTTCACCAAAAGAA+GGG 0.565086 1_4:-15356089 Msa0152550:CDS
AGATTGAGCTGCATCAGCCA+CGG 0.566095 1_4:-15359834 Msa0152550:CDS
GCGGGGCTGATGTAGATGCT+GGG 0.566559 1_4:-15356000 Msa0152550:CDS
TCTTCACGTATTTCCGTGGG+TGG 0.569260 1_4:-15358660 Msa0152550:CDS
CGGTTTGGTATATGTTCGCA+GGG 0.571657 1_4:-15358832 Msa0152550:CDS
GAACCTGGAAAAGCAATGGC+AGG 0.572762 1_4:-15356505 Msa0152550:CDS
ATGGAGTGAAATCTATTGTA+CGG 0.574202 1_4:+15359291 None:intergenic
TCCATTGGATCAATTGTTCG+AGG 0.574408 1_4:+15357037 None:intergenic
TGATCTTTCAGCCATCTCAC+GGG 0.575057 1_4:+15358915 None:intergenic
TTAATTCATTGGTTCAGCAC+GGG 0.576593 1_4:-15359061 Msa0152550:CDS
ATTCCTTGAGGAGCAACCAT+GGG 0.576711 1_4:+15359113 None:intergenic
TACCGAACCTGGAAGGCAGA+CGG 0.577968 1_4:+15358249 None:intergenic
TGACAAACTTCTGCTAGGTA+AGG 0.579392 1_4:+15360116 None:intergenic
GACAACTTCACCGATGAGGT+TGG 0.580272 1_4:+15358195 None:intergenic
GCCAGCTTTGCGCCATATGG+TGG 0.580852 1_4:-15357620 Msa0152550:CDS
ACAAACCATAGTAACTATGA+TGG 0.581319 1_4:+15355930 None:intergenic
TGTAAGGTCCCTAAGGAAAG+AGG 0.581946 1_4:-15356044 Msa0152550:CDS
GGATCATGATGTGGAGATTG+AGG 0.583073 1_4:-15356987 Msa0152550:intron
GATGAGGATGCATTCGAGCA+TGG 0.583156 1_4:-15355819 Msa0152550:CDS
TTCGGAAAATCTCTGCTGCT+AGG 0.585712 1_4:+15359227 None:intergenic
GAGGTGGATTATTTGAACTA+CGG 0.587126 1_4:+15358880 None:intergenic
TTTGCTTGTCCAAATCAAGA+AGG 0.588553 1_4:-15355852 Msa0152550:CDS
ACACCAACTGGAGATACCGC+TGG 0.589986 1_4:-15358507 Msa0152550:CDS
AATTCCTTGAGGAGCAACCA+TGG 0.591178 1_4:+15359112 None:intergenic
ACCGAAGCAGAAATCCTAAG+TGG 0.593207 1_4:-15356130 Msa0152550:CDS
CTTAGCCACTTCAAGTGTGA+AGG 0.595199 1_4:+15356273 None:intergenic
CAGAATATTAGTGACCTCCC+CGG 0.596334 1_4:+15357945 None:intergenic
GTAGAGCAGTATACTGGTGA+AGG 0.597589 1_4:-15360240 Msa0152550:CDS
TTATCTTCACGTATTTCCGT+GGG 0.598036 1_4:-15358663 Msa0152550:CDS
CCGTTATCCAAAGATATAGT+CGG 0.598437 1_4:+15358852 None:intergenic
TAGGAGCTCCCGTACTGCAA+TGG 0.599827 1_4:+15360093 None:intergenic
GTTGCTATAAAGATAAGAGA+AGG 0.600335 1_4:-15360210 Msa0152550:CDS
TTTCACCAAAAGAAGGGATG+CGG 0.600513 1_4:-15356083 Msa0152550:CDS
CCAAAAGGAAGAGCAATGAT+GGG 0.604423 1_4:-15357805 Msa0152550:CDS
GACGACGAGGTATTTCTGCT+GGG 0.605891 1_4:+15356422 None:intergenic
TCTGTTATGAACCCGTGAGA+TGG 0.606365 1_4:-15358926 Msa0152550:CDS
AATGGTGACAAACTTCTGCT+AGG 0.606850 1_4:+15360111 None:intergenic
GGACTTGATGTCTTCCGGGG+AGG 0.608943 1_4:-15357959 Msa0152550:CDS
AATGTCCTTGACATCAAGAG+TGG 0.609518 1_4:+15358062 None:intergenic
CAAAGAACCTGGAAAAGCAA+TGG 0.611171 1_4:-15356509 Msa0152550:CDS
GACTGCCCAATACAACTGCA+TGG 0.611530 1_4:+15359272 None:intergenic
TCTTGAACTTGCCAGGAGAG+TGG 0.617568 1_4:-15358298 Msa0152550:CDS
GATCCAGCGGTATCTCCAGT+TGG 0.618809 1_4:+15358504 None:intergenic
GGAGGTCACTAATATTCTGA+AGG 0.618977 1_4:-15357941 Msa0152550:CDS
GGCTGTTGATCCAACCTCAT+CGG 0.619301 1_4:-15358205 Msa0152550:CDS
TGGCGGGTACAAAGGAGTTG+TGG 0.620817 1_4:-15358226 Msa0152550:CDS
ATTGGATCAATTGTTCGAGG+TGG 0.621802 1_4:+15357040 None:intergenic
GCGAGGAGTTGGTTCAATGA+CGG 0.622019 1_4:-15356022 Msa0152550:CDS
AGCTTTGCAAGTTCAACACA+TGG 0.622784 1_4:+15356481 None:intergenic
AGATATTGTTCCAAGGCCAA+GGG 0.622935 1_4:-15360046 Msa0152550:CDS
AGTTGCGTGAAAGTTCGCTA+TGG 0.625963 1_4:-15358542 Msa0152550:CDS
TGGAAAGAGATATTGTTCCA+AGG 0.625967 1_4:-15360053 Msa0152550:CDS
AACTGTCGATTCAGATAACA+AGG 0.626566 1_4:+15358099 None:intergenic
GATCCAGACATGGAATTCGA+CGG 0.628180 1_4:-15356241 Msa0152550:CDS
CCATTCCCTTATGGATCCAG+CGG 0.628575 1_4:+15358491 None:intergenic
AGGAGTTGGTTCAATGACGG+CGG 0.630864 1_4:-15356019 Msa0152550:CDS
CCCGCCATACCGAACCTGGA+AGG 0.632312 1_4:+15358242 None:intergenic
GGTCCATACACATTGGAGAG+TGG 0.632421 1_4:-15359167 Msa0152550:CDS
GATATAGTCGGTGACCGAGG+TGG 0.633494 1_4:+15358864 None:intergenic
AGATTCGACAAAGGCACACG+AGG 0.638691 1_4:-15357986 Msa0152550:CDS
TATTGTATTGGATCATGATG+TGG 0.640414 1_4:-15356996 Msa0152550:CDS
CCGAAGCAGAAATCCTAAGT+GGG 0.641056 1_4:-15356129 Msa0152550:CDS
TATATCAGTTCTTCCACCCA+CGG 0.641492 1_4:+15358647 None:intergenic
AGCAAATGGTAAACACACCA+TGG 0.644967 1_4:+15355869 None:intergenic
TTTGGACTTGATGTCTTCCG+GGG 0.650957 1_4:-15357962 Msa0152550:CDS
CGGATCCATTGGTCATCAGG+GGG 0.656023 1_4:+15359311 None:intergenic
AAATCTCTTTACATCAGGCA+CGG 0.656840 1_4:+15360263 None:intergenic
CAGGCACGGTCACATAATGA+GGG 0.657015 1_4:+15360277 None:intergenic
TTCGGGAAGTGATCTTGATG+GGG 0.658230 1_4:-15357098 Msa0152550:CDS
AATACTAACAGATTCGACAA+AGG 0.661843 1_4:-15357995 Msa0152550:CDS
GGTCCCTAAGGAAAGAGGCG+AGG 0.663632 1_4:-15356039 Msa0152550:CDS
GGATCCATAAGGGAATGGAT+GGG 0.665338 1_4:-15358486 Msa0152550:CDS
ACGGATCCATTGGTCATCAG+GGG 0.669377 1_4:+15359310 None:intergenic
AATGGAATTAGAATTCCTTG+AGG 0.670025 1_4:+15359101 None:intergenic
GTACAATGAAGGTATGCAGA+GGG 0.670976 1_4:-15355909 Msa0152550:CDS
CAGTGACAACTTCACCGATG+AGG 0.671258 1_4:+15358191 None:intergenic
AAAGATATAGTCGGTGACCG+AGG 0.682239 1_4:+15358861 None:intergenic
TTCCTCTACCGAAACTACAA+CGG 0.682807 1_4:-15358403 Msa0152550:CDS
TTCCTTGAGGAGCAACCATG+GGG 0.687525 1_4:+15359114 None:intergenic
TCAAAACACGAACATCACCT+GGG 0.687693 1_4:+15357656 None:intergenic
TGTACAATGAAGGTATGCAG+AGG 0.691080 1_4:-15355910 Msa0152550:CDS
AAGTGCGGGTCCATACACAT+TGG 0.697196 1_4:-15359174 Msa0152550:CDS
GTATACTGGTGAAGGAAGTG+TGG 0.711055 1_4:-15360232 Msa0152550:CDS
TGAAATCTGGATATTCTGTG+GGG 0.715614 1_4:+15356395 None:intergenic
GGAGTCGTATGATCCAGACA+TGG 0.719837 1_4:-15356251 Msa0152550:CDS
GAGTTGGTTCAATGACGGCG+GGG 0.736958 1_4:-15356017 Msa0152550:CDS
ATTGAGCTGCATCAGCCACG+GGG 0.745981 1_4:-15359832 Msa0152550:CDS
CATCGGTGAAGTTGTCACTG+AGG 0.748282 1_4:-15358188 Msa0152550:CDS
GTAGTTCAAATAATCCACCT+CGG 0.751486 1_4:-15358878 Msa0152550:CDS
TCTGTGGGGATAAGACGACG+AGG 0.799851 1_4:+15356409 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATACAAAATTTGAAATAAAA+AGG + chr1_4:15356472-15356491 None:intergenic 10.0%
!! TCTAATATAAGTTAATAAAA+TGG - chr1_4:15359582-15359601 Msa0152550:intron 10.0%
!! TCAATAAAATAGTTCTTAAA+AGG + chr1_4:15356875-15356894 None:intergenic 15.0%
!! AAAAAAAGTAAATTTAAGGA+TGG + chr1_4:15358881-15358900 None:intergenic 15.0%
!! TGCAAAAAAAAGTAAATTTA+AGG + chr1_4:15358885-15358904 None:intergenic 15.0%
!!! AATATTTTGCAGTTATTTAT+AGG - chr1_4:15358952-15358971 Msa0152550:CDS 15.0%
!!! TATCATTTAGAATGTTATTT+TGG - chr1_4:15358977-15358996 Msa0152550:CDS 15.0%
!!! TTTATCTTGTATTTTATGTA+TGG - chr1_4:15359275-15359294 Msa0152550:CDS 15.0%
!!! TTTTATTATAAGTTGAAAAG+GGG + chr1_4:15359393-15359412 None:intergenic 15.0%
!!! CTTTTATTATAAGTTGAAAA+GGG + chr1_4:15359394-15359413 None:intergenic 15.0%
!!! TCTTTTATTATAAGTTGAAA+AGG + chr1_4:15359395-15359414 None:intergenic 15.0%
!!! ATCTTTTGATTTTCCTAAAT+AGG + chr1_4:15355877-15355896 None:intergenic 20.0%
!! TATTTAGGAAAATCAAAAGA+TGG - chr1_4:15355876-15355895 Msa0152550:CDS 20.0%
!!! AGAAAAGATTATCTGTTTTA+TGG - chr1_4:15356238-15356257 Msa0152550:CDS 20.0%
!!! CTTGTTTAAAGTTAATTCAT+TGG - chr1_4:15357135-15357154 Msa0152550:intron 20.0%
!! GCGTAAATACAAAAAATATA+TGG - chr1_4:15357462-15357481 Msa0152550:intron 20.0%
!!! ATTTAGCTACATTTTTTATG+CGG + chr1_4:15357756-15357775 None:intergenic 20.0%
!! TTGTTCAATATTCTAACAAT+AGG - chr1_4:15358466-15358485 Msa0152550:CDS 20.0%
!! TGTTCAATATTCTAACAATA+GGG - chr1_4:15358467-15358486 Msa0152550:CDS 20.0%
!! AGAAAAAAACTTAACTATAG+AGG + chr1_4:15359028-15359047 None:intergenic 20.0%
!! AAGTTAATAAAATGGTTTCA+TGG - chr1_4:15359590-15359609 Msa0152550:intron 20.0%
!! TACAAATCAAAGAATGTAAT+AGG - chr1_4:15359858-15359877 Msa0152550:CDS 20.0%
!!! ATGTAATAGGAAAACTTTTT+AGG - chr1_4:15359871-15359890 Msa0152550:CDS 20.0%
!!! TGTAATAGGAAAACTTTTTA+GGG - chr1_4:15359872-15359891 Msa0152550:CDS 20.0%
! TTAGATTGACATCATTTACT+TGG - chr1_4:15355789-15355808 Msa0152550:CDS 25.0%
!! TTGATTTTCCTAAATAGGAT+AGG + chr1_4:15355872-15355891 None:intergenic 25.0%
! AGCTTTCATATGAGAATATT+TGG - chr1_4:15356349-15356368 Msa0152550:CDS 25.0%
!!! TACAAAGTATCTATTGATTC+AGG - chr1_4:15356404-15356423 Msa0152550:CDS 25.0%
! AAAAAGGAAAATGAAGAACA+TGG + chr1_4:15356456-15356475 None:intergenic 25.0%
!! ATTGGTTTATGGTACATTTA+TGG - chr1_4:15356593-15356612 Msa0152550:intron 25.0%
! ATATAATACAACACAACACA+TGG + chr1_4:15356631-15356650 None:intergenic 25.0%
! GTTGTATTATATAGCTAGAT+TGG - chr1_4:15356639-15356658 Msa0152550:intron 25.0%
! ACTTTAAACAAGATGTCAAA+TGG + chr1_4:15357127-15357146 None:intergenic 25.0%
! AGAAAAGATGTACTATTCAA+AGG - chr1_4:15357255-15357274 Msa0152550:intron 25.0%
! ACTAGGATATTTATTCCAAA+AGG - chr1_4:15358387-15358406 Msa0152550:CDS 25.0%
! AAAAACTTCACCATATTCTA+GGG + chr1_4:15358448-15358467 None:intergenic 25.0%
!! ATCATCTTCACTTCTTTTAA+CGG - chr1_4:15358773-15358792 Msa0152550:CDS 25.0%
! ACTAAAAGATTTATACCATG+TGG + chr1_4:15359428-15359447 None:intergenic 25.0%
!! TCAGTTAAGTATGAATCTTT+TGG + chr1_4:15359537-15359556 None:intergenic 25.0%
!!! ACATTCTTTGATTTGTAGAT+AGG + chr1_4:15359855-15359874 None:intergenic 25.0%
!!! AAACTTTTTAGGGAAATTCA+AGG - chr1_4:15359882-15359901 Msa0152550:CDS 25.0%
!! AATTCAAGGTATTTCAACTA+AGG - chr1_4:15359896-15359915 Msa0152550:CDS 25.0%
!! TTTTCATAATATTCCCACTT+AGG + chr1_4:15360094-15360113 None:intergenic 25.0%
! AAAATCTTTCACCAAAAGAA+GGG - chr1_4:15360118-15360137 Msa0152550:CDS 25.0%
TTTCTTCTCCTATCCTATTT+AGG - chr1_4:15355861-15355880 Msa0152550:CDS 30.0%
TCTACAAATCTCTTTACATC+AGG + chr1_4:15355952-15355971 None:intergenic 30.0%
GTTGCTATAAAGATAAGAGA+AGG - chr1_4:15355997-15356016 Msa0152550:CDS 30.0%
! CATTTCCCGAACTTTTAAAT+AGG + chr1_4:15356136-15356155 None:intergenic 30.0%
CTATTTAAAAGTTCGGGAAA+TGG - chr1_4:15356134-15356153 Msa0152550:CDS 30.0%
! GATGATGTGAAACTGTATTT+TGG - chr1_4:15356201-15356220 Msa0152550:CDS 30.0%
! ATTATCTGTTTTATGGAGAG+AGG - chr1_4:15356245-15356264 Msa0152550:CDS 30.0%
!! AGGATGTTAGAGTTGATTTT+GGG - chr1_4:15356268-15356287 Msa0152550:CDS 30.0%
! GTTTGAATGTCTTATTGTCA+TGG + chr1_4:15356326-15356345 None:intergenic 30.0%
ATGCATTAAATGCAACAAAC+AGG + chr1_4:15356505-15356524 None:intergenic 30.0%
!! ATCTCAAGAACATTGGTTTA+TGG - chr1_4:15356582-15356601 Msa0152550:CDS 30.0%
CTCTTCTGTTTGTAGTTAAT+TGG - chr1_4:15356785-15356804 Msa0152550:intron 30.0%
! TTATATGCATCATCTGAAGT+AGG + chr1_4:15356839-15356858 None:intergenic 30.0%
ATGGAGTGAAATCTATTGTA+CGG + chr1_4:15356919-15356938 None:intergenic 30.0%
! GCAAAATTTTCCCTGAAATT+CGG + chr1_4:15357001-15357020 None:intergenic 30.0%
AATGGAATTAGAATTCCTTG+AGG + chr1_4:15357109-15357128 None:intergenic 30.0%
! TATATCTTTGGATAACGGTT+TGG - chr1_4:15357360-15357379 Msa0152550:intron 30.0%
ATTCTTTCCATCCTTAGAAA+TGG - chr1_4:15357592-15357611 Msa0152550:CDS 30.0%
! CAATAACTATGCCATTTCTA+AGG + chr1_4:15357606-15357625 None:intergenic 30.0%
CTTAGAAATGGCATAGTTAT+TGG - chr1_4:15357604-15357623 Msa0152550:CDS 30.0%
! TTTTGGCATGTAGTAAGTTT+CGG - chr1_4:15358085-15358104 Msa0152550:CDS 30.0%
AATACTAACAGATTCGACAA+AGG - chr1_4:15358212-15358231 Msa0152550:CDS 30.0%
GAAAGAAATGGTTCAACATT+AGG + chr1_4:15358315-15358334 None:intergenic 30.0%
!! ATTTAGGGCCTTAAAACTTT+TGG - chr1_4:15358350-15358369 Msa0152550:CDS 30.0%
!!! CCTTAAAACTTTTGGAATTG+CGG - chr1_4:15358358-15358377 Msa0152550:CDS 30.0%
CAAAAACTTCACCATATTCT+AGG + chr1_4:15358449-15358468 None:intergenic 30.0%
AGTCTTTCTCATGTAGTTAA+TGG - chr1_4:15358495-15358514 Msa0152550:CDS 30.0%
TTCTCATGTAGTTAATGGTA+AGG - chr1_4:15358500-15358519 Msa0152550:CDS 30.0%
GAAGTGAAGATGATCAAAAT+AGG + chr1_4:15358767-15358786 None:intergenic 30.0%
! TGGATGAGTTTTTCTTCAAT+GGG + chr1_4:15358917-15358936 None:intergenic 30.0%
!! ATATTTTAAGCCTACTTCTC+TGG + chr1_4:15358937-15358956 None:intergenic 30.0%
!!! TAGAATGTTATTTTGGCAAG+TGG - chr1_4:15358984-15359003 Msa0152550:CDS 30.0%
ATGATCCAATACAATAGGTT+TGG + chr1_4:15359207-15359226 None:intergenic 30.0%
ACATCATGATCCAATACAAT+AGG + chr1_4:15359212-15359231 None:intergenic 30.0%
TATTGTATTGGATCATGATG+TGG - chr1_4:15359211-15359230 Msa0152550:CDS 30.0%
!! TCTTTTAGTTATTACCCCTT+TGG - chr1_4:15359439-15359458 Msa0152550:intron 30.0%
ATATTAGAATGCATGTTGCA+GGG + chr1_4:15359570-15359589 None:intergenic 30.0%
TATATTAGAATGCATGTTGC+AGG + chr1_4:15359571-15359590 None:intergenic 30.0%
ACAATCGTTGAGTATGTAAT+TGG + chr1_4:15359640-15359659 None:intergenic 30.0%
ATGAAATCTGGATATTCTGT+GGG + chr1_4:15359816-15359835 None:intergenic 30.0%
! TTATGCTTTTCCATGAAATC+TGG + chr1_4:15359828-15359847 None:intergenic 30.0%
AACCAATTATGACTACAAGT+TGG - chr1_4:15360025-15360044 Msa0152550:CDS 30.0%
ACCAATTATGACTACAAGTT+GGG - chr1_4:15360026-15360045 Msa0152550:CDS 30.0%
CAAAATCTTTCACCAAAAGA+AGG - chr1_4:15360117-15360136 Msa0152550:CDS 30.0%
ACTTACCATCATAGTTACTA+TGG - chr1_4:15360272-15360291 Msa0152550:CDS 30.0%
ACAAACCATAGTAACTATGA+TGG + chr1_4:15360280-15360299 None:intergenic 30.0%
! TACTATGGTTTGTACAATGA+AGG - chr1_4:15360287-15360306 Msa0152550:CDS 30.0%
AGTAAAACAGTTGAGCTGTA+TGG - chr1_4:15355904-15355923 Msa0152550:CDS 35.0%
AAATCTCTTTACATCAGGCA+CGG + chr1_4:15355947-15355966 None:intergenic 35.0%
AGATTTGTAGAGCAGTATAC+TGG - chr1_4:15355961-15355980 Msa0152550:CDS 35.0%
TTGCAAATGCTGTTCGATTA+CGG + chr1_4:15356029-15356048 None:intergenic 35.0%
AGATCATGCTACAGATATGA+TGG - chr1_4:15356068-15356087 Msa0152550:CDS 35.0%
GGAGCTCCTATTTAAAAGTT+CGG - chr1_4:15356127-15356146 Msa0152550:CDS 35.0%
GAGCTCCTATTTAAAAGTTC+GGG - chr1_4:15356128-15356147 Msa0152550:CDS 35.0%
TGGAAAGAGATATTGTTCCA+AGG - chr1_4:15356154-15356173 Msa0152550:CDS 35.0%
AAACTGTGCAAAAATTCCCT+TGG + chr1_4:15356180-15356199 None:intergenic 35.0%
! AAGGGAATTTTTGCACAGTT+TGG - chr1_4:15356179-15356198 Msa0152550:CDS 35.0%
!! GAGGATGTTAGAGTTGATTT+TGG - chr1_4:15356267-15356286 Msa0152550:CDS 35.0%
!!! GTTAGAGTTGATTTTGGGAT+TGG - chr1_4:15356273-15356292 Msa0152550:CDS 35.0%
TTCTTGAGATCACTAAGCTT+GGG + chr1_4:15356572-15356591 None:intergenic 35.0%
CTTAGTGATCTCAAGAACAT+TGG - chr1_4:15356575-15356594 Msa0152550:CDS 35.0%
CTTACTGAACATGAGATGAA+AGG + chr1_4:15356704-15356723 None:intergenic 35.0%
AATCTATTGTACGGATCCAT+TGG + chr1_4:15356910-15356929 None:intergenic 35.0%
! CAGAGATTTTCCGAATTTCA+GGG - chr1_4:15356988-15357007 Msa0152550:CDS 35.0%
! GGAAAATTTTGCTCATTACG+AGG - chr1_4:15357009-15357028 Msa0152550:CDS 35.0%
ACATCCAGATTGCAAGAAAA+AGG + chr1_4:15357070-15357089 None:intergenic 35.0%
!! GTTAATTCATTGGTTCAGCA+CGG - chr1_4:15357145-15357164 Msa0152550:intron 35.0%
!! TTAATTCATTGGTTCAGCAC+GGG - chr1_4:15357146-15357165 Msa0152550:intron 35.0%
! AGCTCAACATTCTTTCTAGT+TGG + chr1_4:15357220-15357239 None:intergenic 35.0%
!! GAGGTGGATTATTTGAACTA+CGG + chr1_4:15357330-15357349 None:intergenic 35.0%
GTAGTTCAAATAATCCACCT+CGG - chr1_4:15357329-15357348 Msa0152550:intron 35.0%
CCGTTATCCAAAGATATAGT+CGG + chr1_4:15357358-15357377 None:intergenic 35.0%
CCGACTATATCTTTGGATAA+CGG - chr1_4:15357355-15357374 Msa0152550:intron 35.0%
! CCACAAAAGTATACTTTGCA+AGG + chr1_4:15357412-15357431 None:intergenic 35.0%
! CCTTGCAAAGTATACTTTTG+TGG - chr1_4:15357409-15357428 Msa0152550:intron 35.0%
TTTATCTTCACGTATTTCCG+TGG - chr1_4:15357543-15357562 Msa0152550:intron 35.0%
TTATCTTCACGTATTTCCGT+GGG - chr1_4:15357544-15357563 Msa0152550:intron 35.0%
! AACTATGCCATTTCTAAGGA+TGG + chr1_4:15357602-15357621 None:intergenic 35.0%
ACCAAATATGTCTTCTCTGA+TGG - chr1_4:15357871-15357890 Msa0152550:CDS 35.0%
TCCATCAGAGAAGACATATT+TGG + chr1_4:15357875-15357894 None:intergenic 35.0%
TATGTCTTCTCTGATGGAAT+TGG - chr1_4:15357877-15357896 Msa0152550:CDS 35.0%
ATGTCTTCTCTGATGGAATT+GGG - chr1_4:15357878-15357897 Msa0152550:CDS 35.0%
AAATATCTCTTGAACTTGCC+AGG - chr1_4:15357902-15357921 Msa0152550:CDS 35.0%
! CAACACAGATTTGGATGTTT+TGG - chr1_4:15358068-15358087 Msa0152550:CDS 35.0%
!! AACTGTCGATTCAGATAACA+AGG + chr1_4:15358111-15358130 None:intergenic 35.0%
TGCAGCATCATTGAAAGAAA+TGG + chr1_4:15358327-15358346 None:intergenic 35.0%
AATGATGCTGCAGACATTTA+GGG - chr1_4:15358335-15358354 Msa0152550:CDS 35.0%
! CCGCAATTCCAAAAGTTTTA+AGG + chr1_4:15358361-15358380 None:intergenic 35.0%
GAAACTAGAACCCTAGAATA+TGG - chr1_4:15358435-15358454 Msa0152550:CDS 35.0%
AAACAACACAATCCACCATA+TGG + chr1_4:15358602-15358621 None:intergenic 35.0%
!!! TGTGTTGTTTTCCCTCAAAA+AGG - chr1_4:15358612-15358631 Msa0152550:CDS 35.0%
! CTGGATGAGTTTTTCTTCAA+TGG + chr1_4:15358918-15358937 None:intergenic 35.0%
AAAAACTCATCCAGAGAAGT+AGG - chr1_4:15358924-15358943 Msa0152550:CDS 35.0%
ACCACATCCAAATGAATGTT+CGG - chr1_4:15359091-15359110 Msa0152550:CDS 35.0%
TTCTGCCAAACCTATTGTAT+TGG - chr1_4:15359199-15359218 Msa0152550:CDS 35.0%
!!! TCCTTTTAGCTTTACATCTG+TGG - chr1_4:15359248-15359267 Msa0152550:CDS 35.0%
!!! CCTTTTAGCTTTACATCTGT+GGG - chr1_4:15359249-15359268 Msa0152550:CDS 35.0%
GAGCAATAATTGTTTCAGCT+AGG - chr1_4:15359493-15359512 Msa0152550:intron 35.0%
TTTCAGCTAGGATTCAAACT+CGG - chr1_4:15359505-15359524 Msa0152550:intron 35.0%
ATAAAATGGTTTCATGGTGC+AGG - chr1_4:15359596-15359615 Msa0152550:intron 35.0%
TACATACTCAACGATTGTCT+TGG - chr1_4:15359642-15359661 Msa0152550:intron 35.0%
TGAAATCTGGATATTCTGTG+GGG + chr1_4:15359815-15359834 None:intergenic 35.0%
CATGAAATCTGGATATTCTG+TGG + chr1_4:15359817-15359836 None:intergenic 35.0%
CACAGAATATCCAGATTTCA+TGG - chr1_4:15359815-15359834 Msa0152550:CDS 35.0%
! CAAGGTATTTCAACTAAGGA+TGG - chr1_4:15359900-15359919 Msa0152550:CDS 35.0%
TCCCAACTTGTAGTCATAAT+TGG + chr1_4:15360030-15360049 None:intergenic 35.0%
! ACCATTTTCTAAGCTTTCCA+TGG - chr1_4:15360321-15360340 Msa0152550:exon 35.0%
ACCATGGAAAGCTTAGAAAA+TGG + chr1_4:15360325-15360344 None:intergenic 35.0%
!! TCTTGATTTGGACAAGCAAA+TGG + chr1_4:15360355-15360374 None:intergenic 35.0%
TTTGCTTGTCCAAATCAAGA+AGG - chr1_4:15360355-15360374 Msa0152550:five_prime_UTR 35.0%
TGCAAATGCTGTTCGATTAC+GGG + chr1_4:15356028-15356047 None:intergenic 40.0%
TGACAAACTTCTGCTAGGTA+AGG + chr1_4:15356094-15356113 None:intergenic 40.0%
AATGGTGACAAACTTCTGCT+AGG + chr1_4:15356099-15356118 None:intergenic 40.0%
AGTTTGTCACCATTGCAGTA+CGG - chr1_4:15356105-15356124 Msa0152550:CDS 40.0%
AGATATTGTTCCAAGGCCAA+GGG - chr1_4:15356161-15356180 Msa0152550:CDS 40.0%
! ATCTGTTTTATGGAGAGAGG+AGG - chr1_4:15356248-15356267 Msa0152550:CDS 40.0%
TTGGGATTGGAATGAGAAAG+TGG - chr1_4:15356286-15356305 Msa0152550:CDS 40.0%
!! TACTTTGTAGTTTTACCCCG+TGG + chr1_4:15356393-15356412 None:intergenic 40.0%
GTTCTTGAGATCACTAAGCT+TGG + chr1_4:15356573-15356592 None:intergenic 40.0%
TCATATGTGATGTGCAGCAA+AGG + chr1_4:15356749-15356768 None:intergenic 40.0%
! TGTAGTTAATTGGTGCTCCT+CGG - chr1_4:15356795-15356814 Msa0152550:intron 40.0%
GAATAAAGCTCAAAAACCCG+AGG + chr1_4:15356815-15356834 None:intergenic 40.0%
TTCACTCCATGCAGTTGTAT+TGG - chr1_4:15356929-15356948 Msa0152550:intron 40.0%
TCACTCCATGCAGTTGTATT+GGG - chr1_4:15356930-15356949 Msa0152550:intron 40.0%
! GCAGAGATTTTCCGAATTTC+AGG - chr1_4:15356987-15357006 Msa0152550:intron 40.0%
! ATCGCCTTTTTCTTGCAATC+TGG - chr1_4:15357063-15357082 Msa0152550:CDS 40.0%
! CGATTTGAGACATTGATCTC+TGG + chr1_4:15357436-15357455 None:intergenic 40.0%
TATATCAGTTCTTCCACCCA+CGG + chr1_4:15357563-15357582 None:intergenic 40.0%
GCTAAATATGCTGCTAGACT+TGG - chr1_4:15357769-15357788 Msa0152550:CDS 40.0%
! GCTAGACTTGGACAATCTTT+TGG - chr1_4:15357781-15357800 Msa0152550:CDS 40.0%
TTCCTCTACCGAAACTACAA+CGG - chr1_4:15357804-15357823 Msa0152550:CDS 40.0%
!!! ACATTTTTTAGCCACTCTCC+TGG + chr1_4:15357923-15357942 None:intergenic 40.0%
AGGAGAGTGGCTAAAAAATG+TGG - chr1_4:15357922-15357941 Msa0152550:CDS 40.0%
CGATTCAGACAACACAGATT+TGG - chr1_4:15358059-15358078 Msa0152550:CDS 40.0%
CTTATCCACTCTTGATGTCA+AGG - chr1_4:15358140-15358159 Msa0152550:CDS 40.0%
AATGTCCTTGACATCAAGAG+TGG + chr1_4:15358148-15358167 None:intergenic 40.0%
!! GTTTTGGACTTGATGTCTTC+CGG - chr1_4:15358243-15358262 Msa0152550:CDS 40.0%
! TTTTGGACTTGATGTCTTCC+GGG - chr1_4:15358244-15358263 Msa0152550:CDS 40.0%
GGAGGTCACTAATATTCTGA+AGG - chr1_4:15358266-15358285 Msa0152550:CDS 40.0%
CTGAAGGAGATGCTTATTTG+TGG - chr1_4:15358282-15358301 Msa0152550:CDS 40.0%
CAATGATGCTGCAGACATTT+AGG - chr1_4:15358334-15358353 Msa0152550:CDS 40.0%
TGGAATTGCGGCAAAAAACT+AGG - chr1_4:15358370-15358389 Msa0152550:CDS 40.0%
TCCAAAAGGAAGAGCAATGA+TGG - chr1_4:15358401-15358420 Msa0152550:CDS 40.0%
CCAAAAGGAAGAGCAATGAT+GGG - chr1_4:15358402-15358421 Msa0152550:CDS 40.0%
TCAAAACACGAACATCACCT+GGG + chr1_4:15358554-15358573 None:intergenic 40.0%
TTCAAAACACGAACATCACC+TGG + chr1_4:15358555-15358574 None:intergenic 40.0%
!! AGGTGATGTTCGTGTTTTGA+AGG - chr1_4:15358554-15358573 Msa0152550:CDS 40.0%
! TTTTCCCTCAAAAAGGTCAC+AGG - chr1_4:15358619-15358638 Msa0152550:CDS 40.0%
! TCTACCTGTGACCTTTTTGA+GGG + chr1_4:15358626-15358645 None:intergenic 40.0%
! ATCTACCTGTGACCTTTTTG+AGG + chr1_4:15358627-15358646 None:intergenic 40.0%
ACATTCATTTGGATGTGGTC+TGG + chr1_4:15359090-15359109 None:intergenic 40.0%
CCACATCCAAATGAATGTTC+GGG - chr1_4:15359092-15359111 Msa0152550:CDS 40.0%
TCACTTCCCGAACATTCATT+TGG + chr1_4:15359101-15359120 None:intergenic 40.0%
! GGACATCTACTTTGTTTGCT+GGG - chr1_4:15359130-15359149 Msa0152550:CDS 40.0%
ATTGGATCAATTGTTCGAGG+TGG + chr1_4:15359170-15359189 None:intergenic 40.0%
ACCTCGAACAATTGATCCAA+TGG - chr1_4:15359169-15359188 Msa0152550:CDS 40.0%
TCCATTGGATCAATTGTTCG+AGG + chr1_4:15359173-15359192 None:intergenic 40.0%
TTGGCAGAATCATACTCCAT+TGG + chr1_4:15359188-15359207 None:intergenic 40.0%
CCCACAGATGTAAAGCTAAA+AGG + chr1_4:15359252-15359271 None:intergenic 40.0%
! TATTACCCCTTTGGTTTCTG+AGG - chr1_4:15359448-15359467 Msa0152550:intron 40.0%
! ATTACCCCTTTGGTTTCTGA+GGG - chr1_4:15359449-15359468 Msa0152550:intron 40.0%
! TTTTCCCTCAGAAACCAAAG+GGG + chr1_4:15359456-15359475 None:intergenic 40.0%
! CTTTTCCCTCAGAAACCAAA+GGG + chr1_4:15359457-15359476 None:intergenic 40.0%
! CTTTGGTTTCTGAGGGAAAA+GGG - chr1_4:15359456-15359475 Msa0152550:intron 40.0%
GAAAAGGGATTGTGGTAATC+TGG - chr1_4:15359471-15359490 Msa0152550:intron 40.0%
TTCAGCTAGGATTCAAACTC+GGG - chr1_4:15359506-15359525 Msa0152550:intron 40.0%
AGGTTCTTTGTCTGCAAAGA+CGG + chr1_4:15359688-15359707 None:intergenic 40.0%
CAAAGAACCTGGAAAAGCAA+TGG - chr1_4:15359698-15359717 Msa0152550:intron 40.0%
AGCTTTGCAAGTTCAACACA+TGG + chr1_4:15359729-15359748 None:intergenic 40.0%
! GCAGTTGACTTTCCAAAAAC+CGG - chr1_4:15359759-15359778 Msa0152550:intron 40.0%
TACATCCTTCACACTTGAAG+TGG - chr1_4:15359929-15359948 Msa0152550:CDS 40.0%
! CTACAAGTTGGGAAATCTGA+TGG - chr1_4:15360037-15360056 Msa0152550:CDS 40.0%
!! GGAAATCTGATGGACTACTA+TGG - chr1_4:15360047-15360066 Msa0152550:CDS 40.0%
TTTCACCAAAAGAAGGGATG+CGG - chr1_4:15360124-15360143 Msa0152550:CDS 40.0%
ATGCGATTACTATGGCTGTA+AGG - chr1_4:15360147-15360166 Msa0152550:CDS 40.0%
CTTATGCAAAAGCTTCTGCT+TGG - chr1_4:15360240-15360259 Msa0152550:CDS 40.0%
! TGTACAATGAAGGTATGCAG+AGG - chr1_4:15360297-15360316 Msa0152550:CDS 40.0%
! GTACAATGAAGGTATGCAGA+GGG - chr1_4:15360298-15360317 Msa0152550:CDS 40.0%
AGCAAATGGTAAACACACCA+TGG + chr1_4:15360341-15360360 None:intergenic 40.0%
TGGCTTTCTCCTTCTTGATT+TGG + chr1_4:15360367-15360386 None:intergenic 40.0%
AAATCAAGAAGGAGAAAGCC+AGG - chr1_4:15360366-15360385 Msa0152550:five_prime_UTR 40.0%
GTAGAGCAGTATACTGGTGA+AGG - chr1_4:15355967-15355986 Msa0152550:CDS 45.0%
GTATACTGGTGAAGGAAGTG+TGG - chr1_4:15355975-15355994 Msa0152550:CDS 45.0%
GTTTGTCACCATTGCAGTAC+GGG - chr1_4:15356106-15356125 Msa0152550:CDS 45.0%
GAGATATTGTTCCAAGGCCA+AGG - chr1_4:15356160-15356179 Msa0152550:CDS 45.0%
TGCAAAAATTCCCTTGGCCT+TGG + chr1_4:15356174-15356193 None:intergenic 45.0%
! GTAGTTAATTGGTGCTCCTC+GGG - chr1_4:15356796-15356815 Msa0152550:intron 45.0%
TACGGATCCATTGGTCATCA+GGG + chr1_4:15356901-15356920 None:intergenic 45.0%
TTCGGAAAATCTCTGCTGCT+AGG + chr1_4:15356983-15357002 None:intergenic 45.0%
TGCTCATTACGAGGAAAGTG+CGG - chr1_4:15357018-15357037 Msa0152550:CDS 45.0%
GATCCACTCTCCAATGTGTA+TGG + chr1_4:15357046-15357065 None:intergenic 45.0%
ATTCCTTGAGGAGCAACCAT+GGG + chr1_4:15357097-15357116 None:intergenic 45.0%
AATTCCTTGAGGAGCAACCA+TGG + chr1_4:15357098-15357117 None:intergenic 45.0%
TCTGTTATGAACCCGTGAGA+TGG - chr1_4:15357281-15357300 Msa0152550:intron 45.0%
TGATCTTTCAGCCATCTCAC+GGG + chr1_4:15357295-15357314 None:intergenic 45.0%
CTGATCTTTCAGCCATCTCA+CGG + chr1_4:15357296-15357315 None:intergenic 45.0%
AAAGATATAGTCGGTGACCG+AGG + chr1_4:15357349-15357368 None:intergenic 45.0%
! TCGGTCACCGACTATATCTT+TGG - chr1_4:15357348-15357367 Msa0152550:intron 45.0%
!! ACGGTTTGGTATATGTTCGC+AGG - chr1_4:15357374-15357393 Msa0152550:intron 45.0%
!! CGGTTTGGTATATGTTCGCA+GGG - chr1_4:15357375-15357394 Msa0152550:intron 45.0%
! ACGTGTTTCGTTTGTTGACG+AGG - chr1_4:15357495-15357514 Msa0152550:intron 45.0%
! TTCGTTTGTTGACGAGGAGT+TGG - chr1_4:15357501-15357520 Msa0152550:intron 45.0%
AGTTGCGTGAAAGTTCGCTA+TGG - chr1_4:15357665-15357684 Msa0152550:CDS 45.0%
ATGTTTGCTCGTACACCAAC+TGG - chr1_4:15357688-15357707 Msa0152550:CDS 45.0%
AGATACCGCTGGATCCATAA+GGG - chr1_4:15357711-15357730 Msa0152550:CDS 45.0%
TGGATCCATAAGGGAATGGA+TGG - chr1_4:15357720-15357739 Msa0152550:CDS 45.0%
GGATCCATAAGGGAATGGAT+GGG - chr1_4:15357721-15357740 Msa0152550:CDS 45.0%
ATCTCCCATCCATTCCCTTA+TGG + chr1_4:15357728-15357747 None:intergenic 45.0%
TTTGGACTTGATGTCTTCCG+GGG - chr1_4:15358245-15358264 Msa0152550:CDS 45.0%
CAGAATATTAGTGACCTCCC+CGG + chr1_4:15358265-15358284 None:intergenic 45.0%
! CCCATCATTGCTCTTCCTTT+TGG + chr1_4:15358405-15358424 None:intergenic 45.0%
!!! TGTTCGTGTTTTGAAGGCTG+TGG - chr1_4:15358560-15358579 Msa0152550:CDS 45.0%
CCCGAACATTCATTTGGATG+TGG + chr1_4:15359095-15359114 None:intergenic 45.0%
TGTTCGGGAAGTGATCTTGA+TGG - chr1_4:15359107-15359126 Msa0152550:CDS 45.0%
GTTCGGGAAGTGATCTTGAT+GGG - chr1_4:15359108-15359127 Msa0152550:CDS 45.0%
TTCGGGAAGTGATCTTGATG+GGG - chr1_4:15359109-15359128 Msa0152550:CDS 45.0%
! GGGACATCTACTTTGTTTGC+TGG - chr1_4:15359129-15359148 Msa0152550:CDS 45.0%
GGATCATGATGTGGAGATTG+AGG - chr1_4:15359220-15359239 Msa0152550:CDS 45.0%
AAAGACTCAAGCAAGCCACA+TGG - chr1_4:15359410-15359429 Msa0152550:CDS 45.0%
! CCTTTTCCCTCAGAAACCAA+AGG + chr1_4:15359458-15359477 None:intergenic 45.0%
! CCTTTGGTTTCTGAGGGAAA+AGG - chr1_4:15359455-15359474 Msa0152550:intron 45.0%
! TTCTGAGGGAAAAGGGATTG+TGG - chr1_4:15359463-15359482 Msa0152550:intron 45.0%
GTCTTTGCAGACAAAGAACC+TGG - chr1_4:15359687-15359706 Msa0152550:intron 45.0%
! AGGTATTTCTGCTGGGATAC+CGG + chr1_4:15359781-15359800 None:intergenic 45.0%
CTTAGCCACTTCAAGTGTGA+AGG + chr1_4:15359937-15359956 None:intergenic 45.0%
CTTCACACTTGAAGTGGCTA+AGG - chr1_4:15359935-15359954 Msa0152550:CDS 45.0%
GATCCAGACATGGAATTCGA+CGG - chr1_4:15359966-15359985 Msa0152550:CDS 45.0%
CATGGAATTCGACGGCTTTA+TGG - chr1_4:15359974-15359993 Msa0152550:CDS 45.0%
ACCGAAGCAGAAATCCTAAG+TGG - chr1_4:15360077-15360096 Msa0152550:CDS 45.0%
CCCACTTAGGATTTCTGCTT+CGG + chr1_4:15360081-15360100 None:intergenic 45.0%
CCGAAGCAGAAATCCTAAGT+GGG - chr1_4:15360078-15360097 Msa0152550:CDS 45.0%
TGTAAGGTCCCTAAGGAAAG+AGG - chr1_4:15360163-15360182 Msa0152550:CDS 45.0%
TGGAACAAAGTTTCAGTCGC+AGG - chr1_4:15360408-15360427 Msa0152550:five_prime_UTR 45.0%
CAGGCACGGTCACATAATGA+GGG + chr1_4:15355933-15355952 None:intergenic 50.0%
TCAGGCACGGTCACATAATG+AGG + chr1_4:15355934-15355953 None:intergenic 50.0%
AGATTGAGCTGCATCAGCCA+CGG - chr1_4:15356373-15356392 Msa0152550:CDS 50.0%
TTGATCCCCCTGATGACCAA+TGG - chr1_4:15356891-15356910 Msa0152550:intron 50.0%
ACGGATCCATTGGTCATCAG+GGG + chr1_4:15356900-15356919 None:intergenic 50.0%
GTACGGATCCATTGGTCATC+AGG + chr1_4:15356902-15356921 None:intergenic 50.0%
GACTGCCCAATACAACTGCA+TGG + chr1_4:15356938-15356957 None:intergenic 50.0%
! GCTCATTACGAGGAAAGTGC+GGG - chr1_4:15357019-15357038 Msa0152550:CDS 50.0%
AAGTGCGGGTCCATACACAT+TGG - chr1_4:15357033-15357052 Msa0152550:CDS 50.0%
GGTCCATACACATTGGAGAG+TGG - chr1_4:15357040-15357059 Msa0152550:CDS 50.0%
CAATCTGGATGTTGTCCCCA+TGG - chr1_4:15357078-15357097 Msa0152550:CDS 50.0%
TTCCTTGAGGAGCAACCATG+GGG + chr1_4:15357096-15357115 None:intergenic 50.0%
TCTTCACGTATTTCCGTGGG+TGG - chr1_4:15357547-15357566 Msa0152550:intron 50.0%
GAGATACCGCTGGATCCATA+AGG - chr1_4:15357710-15357729 Msa0152550:CDS 50.0%
CCATTCCCTTATGGATCCAG+CGG + chr1_4:15357719-15357738 None:intergenic 50.0%
GACCGTTGTAGTTTCGGTAG+AGG + chr1_4:15357809-15357828 None:intergenic 50.0%
GCTGCTGACCGTTGTAGTTT+CGG + chr1_4:15357815-15357834 None:intergenic 50.0%
TCTTGAACTTGCCAGGAGAG+TGG - chr1_4:15357909-15357928 Msa0152550:CDS 50.0%
GGCTGTTGATCCAACCTCAT+CGG - chr1_4:15358002-15358021 Msa0152550:CDS 50.0%
GACAACTTCACCGATGAGGT+TGG + chr1_4:15358015-15358034 None:intergenic 50.0%
CAGTGACAACTTCACCGATG+AGG + chr1_4:15358019-15358038 None:intergenic 50.0%
CATCGGTGAAGTTGTCACTG+AGG - chr1_4:15358019-15358038 Msa0152550:CDS 50.0%
! AGATTCGACAAAGGCACACG+AGG - chr1_4:15358221-15358240 Msa0152550:CDS 50.0%
!! GACAAAGGCACACGAGGTTT+TGG - chr1_4:15358227-15358246 Msa0152550:CDS 50.0%
TGCAAAGACGGTGTGTGCAT+TGG + chr1_4:15359676-15359695 None:intergenic 50.0%
GAACCTGGAAAAGCAATGGC+AGG - chr1_4:15359702-15359721 Msa0152550:intron 50.0%
!!! TCTGCTGGGATACCGGTTTT+TGG + chr1_4:15359774-15359793 None:intergenic 50.0%
! GACGACGAGGTATTTCTGCT+GGG + chr1_4:15359788-15359807 None:intergenic 50.0%
! AGACGACGAGGTATTTCTGC+TGG + chr1_4:15359789-15359808 None:intergenic 50.0%
GGAGTCGTATGATCCAGACA+TGG - chr1_4:15359956-15359975 Msa0152550:CDS 50.0%
AAGCCGTCGAATTCCATGTC+TGG + chr1_4:15359972-15359991 None:intergenic 50.0%
GGATGCGGATGCGATTACTA+TGG - chr1_4:15360139-15360158 Msa0152550:CDS 50.0%
CTATGGCTGTAAGGTCCCTA+AGG - chr1_4:15360156-15360175 Msa0152550:CDS 50.0%
ACTCCTCGCCTCTTTCCTTA+GGG + chr1_4:15360174-15360193 None:intergenic 50.0%
AACTCCTCGCCTCTTTCCTT+AGG + chr1_4:15360175-15360194 None:intergenic 50.0%
TAAGGAAAGAGGCGAGGAGT+TGG - chr1_4:15360174-15360193 Msa0152550:CDS 50.0%
! GCGAGGAGTTGGTTCAATGA+CGG - chr1_4:15360185-15360204 Msa0152550:CDS 50.0%
! AGGAGTTGGTTCAATGACGG+CGG - chr1_4:15360188-15360207 Msa0152550:CDS 50.0%
AGAAGGAGAAAGCCAGGATG+AGG - chr1_4:15360372-15360391 Msa0152550:five_prime_UTR 50.0%
GATGAGGATGCATTCGAGCA+TGG - chr1_4:15360388-15360407 Msa0152550:five_prime_UTR 50.0%
TAGGAGCTCCCGTACTGCAA+TGG + chr1_4:15356117-15356136 None:intergenic 55.0%
GATTGAGCTGCATCAGCCAC+GGG - chr1_4:15356374-15356393 Msa0152550:CDS 55.0%
ATTGAGCTGCATCAGCCACG+GGG - chr1_4:15356375-15356394 Msa0152550:CDS 55.0%
CGGATCCATTGGTCATCAGG+GGG + chr1_4:15356899-15356918 None:intergenic 55.0%
GTTCAGCACGGGTGTCTTTC+AGG - chr1_4:15357157-15357176 Msa0152550:intron 55.0%
GATATAGTCGGTGACCGAGG+TGG + chr1_4:15357346-15357365 None:intergenic 55.0%
ACACCAACTGGAGATACCGC+TGG - chr1_4:15357700-15357719 Msa0152550:CDS 55.0%
GATCCAGCGGTATCTCCAGT+TGG + chr1_4:15357706-15357725 None:intergenic 55.0%
CCGCTGGATCCATAAGGGAA+TGG - chr1_4:15357716-15357735 Msa0152550:CDS 55.0%
TTCTATGCCGTCTGCCTTCC+AGG - chr1_4:15357951-15357970 Msa0152550:CDS 55.0%
TACCGAACCTGGAAGGCAGA+CGG + chr1_4:15357961-15357980 None:intergenic 55.0%
! TCTGCCTTCCAGGTTCGGTA+TGG - chr1_4:15357961-15357980 Msa0152550:CDS 55.0%
!! GTTCGGTATGGCGGGTACAA+AGG - chr1_4:15357973-15357992 Msa0152550:CDS 55.0%
! TGGCGGGTACAAAGGAGTTG+TGG - chr1_4:15357981-15358000 Msa0152550:CDS 55.0%
AAAAACCCGTGCTTGCACCC+AGG - chr1_4:15358534-15358553 Msa0152550:CDS 55.0%
ACATCACCTGGGTGCAAGCA+CGG + chr1_4:15358543-15358562 None:intergenic 55.0%
TGTGCCAGCTTTGCGCCATA+TGG - chr1_4:15358584-15358603 Msa0152550:CDS 55.0%
TCCACCATATGGCGCAAAGC+TGG + chr1_4:15358591-15358610 None:intergenic 55.0%
!! GGACCTGCCATTGCTTTTCC+AGG + chr1_4:15359708-15359727 None:intergenic 55.0%
TCTGTGGGGATAAGACGACG+AGG + chr1_4:15359801-15359820 None:intergenic 55.0%
! CGCATCCGCATCCCTTCTTT+TGG + chr1_4:15360132-15360151 None:intergenic 55.0%
! GGAGTTGGTTCAATGACGGC+GGG - chr1_4:15360189-15360208 Msa0152550:CDS 55.0%
! GAGTTGGTTCAATGACGGCG+GGG - chr1_4:15360190-15360209 Msa0152550:CDS 55.0%
GCTCGAATGCATCCTCATCC+TGG + chr1_4:15360387-15360406 None:intergenic 55.0%
GTCCCCATGGTTGCTCCTCA+AGG - chr1_4:15357091-15357110 Msa0152550:CDS 60.0%
TGCCGTCTGCCTTCCAGGTT+CGG - chr1_4:15357956-15357975 Msa0152550:CDS 60.0%
! GCCTTCCAGGTTCGGTATGG+CGG - chr1_4:15357964-15357983 Msa0152550:CDS 60.0%
! CCTTCCAGGTTCGGTATGGC+GGG - chr1_4:15357965-15357984 Msa0152550:CDS 60.0%
TGTACCCGCCATACCGAACC+TGG + chr1_4:15357972-15357991 None:intergenic 60.0%
GGACTTGATGTCTTCCGGGG+AGG - chr1_4:15358248-15358267 Msa0152550:CDS 60.0%
CATCACCTGGGTGCAAGCAC+GGG + chr1_4:15358542-15358561 None:intergenic 60.0%
GCCAGCTTTGCGCCATATGG+TGG - chr1_4:15358587-15358606 Msa0152550:CDS 60.0%
GGTCCCTAAGGAAAGAGGCG+AGG - chr1_4:15360168-15360187 Msa0152550:CDS 60.0%
GCGGGGCTGATGTAGATGCT+GGG - chr1_4:15360207-15360226 Msa0152550:CDS 60.0%
CCCGCCATACCGAACCTGGA+AGG + chr1_4:15357968-15357987 None:intergenic 65.0%
GGCGGGGCTGATGTAGATGC+TGG - chr1_4:15360206-15360225 Msa0152550:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 15355784 15360445 15355784 ID=Msa0152550;Name=Msa0152550
chr1_4 mRNA 15355784 15360445 15355784 ID=Msa0152550-mRNA-1;Parent=Msa0152550;Name=Msa0152550-mRNA-1;_AED=0.41;_eAED=0.41;_QI=111|0.33|0.25|0.5|1|1|4|0|1116
chr1_4 exon 15355784 15356611 15355784 ID=Msa0152550-mRNA-1:exon:6004;Parent=Msa0152550-mRNA-1
chr1_4 exon 15356988 15357138 15356988 ID=Msa0152550-mRNA-1:exon:6003;Parent=Msa0152550-mRNA-1
chr1_4 exon 15357589 15359429 15357589 ID=Msa0152550-mRNA-1:exon:6002;Parent=Msa0152550-mRNA-1
chr1_4 exon 15359804 15360445 15359804 ID=Msa0152550-mRNA-1:exon:6001;Parent=Msa0152550-mRNA-1
chr1_4 five_prime_UTR 15360335 15360445 15360335 ID=Msa0152550-mRNA-1:five_prime_utr;Parent=Msa0152550-mRNA-1
chr1_4 CDS 15359804 15360334 15359804 ID=Msa0152550-mRNA-1:cds;Parent=Msa0152550-mRNA-1
chr1_4 CDS 15357589 15359429 15357589 ID=Msa0152550-mRNA-1:cds;Parent=Msa0152550-mRNA-1
chr1_4 CDS 15356988 15357138 15356988 ID=Msa0152550-mRNA-1:cds;Parent=Msa0152550-mRNA-1
chr1_4 CDS 15355784 15356611 15355784 ID=Msa0152550-mRNA-1:cds;Parent=Msa0152550-mRNA-1
Gene Sequence

>Msa0152550

ATGGTTAAAAGTAAAACAGTTGAGCTGTATGGATTCCCTCATTATGTGACCGTGCCTGATGTAAAGAGATTTGTAGAGCAGTATACTGGTGAAGGAAGTGTGGTTGCTATAAAGATAAGAGAAGGCAAAGCCCGTAATCGAACAGCATTTGCAATTATTCAATTCACTACTAAAGATCATGCTACAGATATGATGGCCTTACCTAGCAGAAGTTTGTCACCATTGCAGTACGGGAGCTCCTATTTAAAAGTTCGGGAAATGGAAAGAGATATTGTTCCAAGGCCAAGGGAATTTTTGCACAGTTTGGATGATGTGAAACTGTATTTTGGCTGTCAAATCTCAAAGAAAAGATTATCTGTTTTATGGAGAGAGGAGGATGTTAGAGTTGATTTTGGGATTGGAATGAGAAAGTGGCGATTCTCTTTGTGCCATGACAATAAGACATTCAAACTTGAGCTTTCATATGAGAATATTTGGAAGATTGAGCTGCATCAGCCACGGGGTAAAACTACAAAGTATCTATTGATTCAGTTAATTGGTGCTCCTCGGGTTTTTGAGCTTTATTCTCCTACTTCAGATGATGCATATAACATATACGAAGATCCTTTTAAGAACTATTTTATTGATCCCCCTGATGACCAATGGATCCGTACAATAGATTTCACTCCATGCAGTTGTATTGGGCAGTCTTCTGCTTTATGTTTAGAGCTTCCTAGCAGCAGAGATTTTCCGAATTTCAGGGAAAATTTTGCTCATTACGAGGAAAGTGCGGGTCCATACACATTGGAGAGTGGATCGCCTTTTTCTTGCAATCTGGATGTTGTCCCCATGGTTGCTCCTCAAGGAATTCTAATTCCATTTGACATCTTGTTTAAAGTTAATTCATTGGTTCAGCACGGGTGTCTTTCAGGTTCTGAACTCGATAATGCTTTCTATCATCTAGTTGATCCAACTAGAAAGAATGTTGAGCTTATTGAGAATGCTTTAGAAAAGATGTACTATTCAAAGGATTTCTGTTATGAACCCGTGAGATGGCTGAAAGATCAGTACGAAATGTACCGTAGTTCAAATAATCCACCTCGGTCACCGACTATATCTTTGGATAACGGTTTGGTATATGTTCGCAGGGCACAGATAACACCTTGCAAAGTATACTTTTGTGGTCCAGAGATCAATGTCTCAAATCGTGTTCTGCGTAAATACAAAAAATATATGGATAACTTTCTACGTGTTTCGTTTGTTGACGAGGAGTTGGATAAACTGTATTCATCAGATTTATCTTCACGTATTTCCGTGGGTGGAAGAACTGATATATACTATAGAATTCTTTCCATCCTTAGAAATGGCATAGTTATTGGTGATAAGAAGTTTGAATTTCTAGCTTTCTCATCAAGTCAGTTGCGTGAAAGTTCGCTATGGATGTTTGCTCGTACACCAACTGGAGATACCGCTGGATCCATAAGGGAATGGATGGGAGATTTTAGCCGCATAAAAAATGTAGCTAAATATGCTGCTAGACTTGGACAATCTTTTGGTTCCTCTACCGAAACTACAACGGTCAGCAGCACTGAAATTGAAATTATTCTTGATGTACATAATAAAACCAAATATGTCTTCTCTGATGGAATTGGGAAAATATCTCTTGAACTTGCCAGGAGAGTGGCTAAAAAATGTGGTTATGATTCTATGCCGTCTGCCTTCCAGGTTCGGTATGGCGGGTACAAAGGAGTTGTGGCTGTTGATCCAACCTCATCGGTGAAGTTGTCACTGAGGATGAGCATGCTCAAGTACGATTCAGACAACACAGATTTGGATGTTTTGGCATGTAGTAAGTTTCGGCCTTGTTATCTGAATCGACAGTTGATTACTCTCTTATCCACTCTTGATGTCAAGGACATTGTTTTCGAGAAAAAACAAAAAGAAGCTGTTGATCAACTGAACACAATACTAACAGATTCGACAAAGGCACACGAGGTTTTGGACTTGATGTCTTCCGGGGAGGTCACTAATATTCTGAAGGAGATGCTTATTTGTGGTTACAAGCCTAATGTTGAACCATTTCTTTCAATGATGCTGCAGACATTTAGGGCCTTAAAACTTTTGGAATTGCGGCAAAAAACTAGGATATTTATTCCAAAAGGAAGAGCAATGATGGGAGTTCTAGATGAAACTAGAACCCTAGAATATGGTGAAGTTTTTGTTCAATATTCTAACAATAGGGAAGACAGTCTTTCTCATGTAGTTAATGGTAAGGTTGTTGTCGCGAAAAACCCGTGCTTGCACCCAGGTGATGTTCGTGTTTTGAAGGCTGTGGATGTGCCAGCTTTGCGCCATATGGTGGATTGTGTTGTTTTCCCTCAAAAAGGTCACAGACCACATCCAAATGAATGTTCGGGAAGTGATCTTGATGGGGACATCTACTTTGTTTGCTGGGATTCTGAATTGATTCCACCTCGAACAATTGATCCAATGGAGTATGATTCTGCCAAACCTATTGTATTGGATCATGATGTGGAGATTGAGGAAGTGCAGAAGTATTTTACCAATTACATACTCAACGATTGTCTTGGAATAATTGCCAATGCACACACCGTCTTTGCAGACAAAGAACCTGGAAAAGCAATGGCAGGTCCATGTGTTGAACTTGCAAAGCTGTTCTCAACAGCAGTTGACTTTCCAAAAACCGGTATCCCAGCAGAAATACCTCGTCGTCTTATCCCCACAGAATATCCAGATTTCATGGAAAAGCATAACAAACCTATCTACAAATCAAAGAATGTAATAGGAAAACTTTTTAGGGAAATTCAAGGTATTTCAACTAAGGATGGTTCTATTACATCCTTCACACTTGAAGTGGCTAAGGAGTCGTATGATCCAGACATGGAATTCGACGGCTTTATGGATTATGTTGATGATGCATTCTATCACAAAACCAATTATGACTACAAGTTGGGAAATCTGATGGACTACTATGGTATCAAAACCGAAGCAGAAATCCTAAGTGGGAATATTATGAAAATGTCAAAATCTTTCACCAAAAGAAGGGATGCGGATGCGATTACTATGGCTGTAAGGTCCCTAAGGAAAGAGGCGAGGAGTTGGTTCAATGACGGCGGGGCTGATGTAGATGCTGGGAGTGATGATGCTTATGCAAAAGCTTCTGCTTGGTACTATGTTACTTACCATCATAGTTACTATGGTTTGTACAATGAAGGTATGCAGAGGGACCATTTTCTAAGCTTTCCATGGTGTGTTTACCATTTGCTTGTCCAAATCAAGAAGGAGAAAGCCAGGATGAGGATGCATTCGAGCATGGAACAAAGTTTCAGTCGCAGGTTGCGTCTTGACTGA
Protein sequence

>Msa0152550

MVKSKTVELYGFPHYVTVPDVKRFVEQYTGEGSVVAIKIREGKARNRTAFAIIQFTTKDHATDMMALPSRSLSPLQYGSSYLKVREMERDIVPRPREFLHSLDDVKLYFGCQISKKRLSVLWREEDVRVDFGIGMRKWRFSLCHDNKTFKLELSYENIWKIELHQPRGKTTKYLLIQLIGAPRVFELYSPTSDDAYNIYEDPFKNYFIDPPDDQWIRTIDFTPCSCIGQSSALCLELPSSRDFPNFRENFAHYEESAGPYTLESGSPFSCNLDVVPMVAPQGILIPFDILFKVNSLVQHGCLSGSELDNAFYHLVDPTRKNVELIENALEKMYYSKDFCYEPVRWLKDQYEMYRSSNNPPRSPTISLDNGLVYVRRAQITPCKVYFCGPEINVSNRVLRKYKKYMDNFLRVSFVDEELDKLYSSDLSSRISVGGRTDIYYRILSILRNGIVIGDKKFEFLAFSSSQLRESSLWMFARTPTGDTAGSIREWMGDFSRIKNVAKYAARLGQSFGSSTETTTVSSTEIEIILDVHNKTKYVFSDGIGKISLELARRVAKKCGYDSMPSAFQVRYGGYKGVVAVDPTSSVKLSLRMSMLKYDSDNTDLDVLACSKFRPCYLNRQLITLLSTLDVKDIVFEKKQKEAVDQLNTILTDSTKAHEVLDLMSSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRALKLLELRQKTRIFIPKGRAMMGVLDETRTLEYGEVFVQYSNNREDSLSHVVNGKVVVAKNPCLHPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPPRTIDPMEYDSAKPIVLDHDVEIEEVQKYFTNYILNDCLGIIANAHTVFADKEPGKAMAGPCVELAKLFSTAVDFPKTGIPAEIPRRLIPTEYPDFMEKHNKPIYKSKNVIGKLFREIQGISTKDGSITSFTLEVAKESYDPDMEFDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILSGNIMKMSKSFTKRRDADAITMAVRSLRKEARSWFNDGGADVDAGSDDAYAKASAWYYVTYHHSYYGLYNEGMQRDHFLSFPWCVYHLLVQIKKEKARMRMHSSMEQSFSRRLRLD*