AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0061520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0061520 MtrunA17_Chr1g0161471 94.987 1117 55 1 1 1116 1 1117 0.0 2181
Msa0061520 MtrunA17_Chr1g0161491 84.107 1120 168 5 1 1116 15 1128 0.0 1930
Msa0061520 MtrunA17_Chr1g0161521 82.321 1120 191 3 1 1116 1 1117 0.0 1868
Msa0061520 MtrunA17_Chr1g0161511 82.264 1122 189 4 1 1116 1 1118 0.0 1864
Msa0061520 MtrunA17_Chr1g0161451 54.270 1124 469 11 5 1102 3 1107 0.0 1221
Msa0061520 MtrunA17_Chr4g0059271 38.455 1139 631 21 3 1097 7 1119 0.0 754
Msa0061520 MtrunA17_Chr3g0137841 36.372 1130 627 22 51 1107 81 1191 0.0 611
Msa0061520 MtrunA17_Chr4g0059261 55.294 85 38 0 851 935 1 85 7.06e-24 99.0
Msa0061520 MtrunA17_Chr6g0486821 21.648 716 410 32 480 1100 300 959 4.87e-14 77.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0061520 AT1G14790.1 61.126 1119 412 10 5 1115 3 1106 0.0 1365
Msa0061520 AT4G11130.1 38.266 1142 623 22 6 1098 11 1119 0.0 744
Msa0061520 AT3G49500.3 36.194 1072 587 28 100 1099 130 1176 4.39e-175 546
Msa0061520 AT3G49500.4 36.194 1072 587 28 100 1099 130 1176 4.39e-175 546
Msa0061520 AT3G49500.1 36.194 1072 587 28 100 1099 130 1176 4.39e-175 546
Msa0061520 AT3G49500.2 36.194 1072 587 28 100 1099 130 1176 4.39e-175 546
Msa0061520 AT3G49500.5 36.194 1072 587 28 100 1099 130 1176 4.39e-175 546
Msa0061520 AT2G19930.2 24.963 677 383 27 365 947 201 846 1.72e-28 124
Msa0061520 AT2G19930.3 24.963 677 383 27 365 947 195 840 1.79e-28 124
Msa0061520 AT2G19930.1 25.197 635 352 25 406 947 242 846 1.58e-27 121
Msa0061520 AT2G19910.2 25.209 599 324 23 436 935 265 838 1.69e-23 108
Msa0061520 AT2G19910.1 24.836 608 324 23 436 935 265 847 8.20e-22 102
Msa0061520 AT2G19920.2 25.361 623 340 29 439 964 281 875 2.82e-21 100
Msa0061520 AT2G19920.1 25.361 623 340 29 439 964 268 862 2.84e-21 100
Msa0061520 AT2G19920.4 25.361 623 340 29 439 964 267 861 3.33e-21 100
Msa0061520 AT2G19920.3 25.361 623 340 29 439 964 267 861 3.36e-21 100

Find 249 sgRNAs with CRISPR-Local

Find 351 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAGGATGTTAGAGTTGATTT+TGG 0.118507 1_2:-19855102 Msa0061520:CDS
CAATGATGCTGCAGACATTT+AGG 0.140329 1_2:-19853027 Msa0061520:CDS
TTTCTTCTCCTATCCTATTT+AGG 0.157937 1_2:-19855508 Msa0061520:five_prime_UTR
CATGGAATTCGACGGCTTTA+TGG 0.160512 1_2:-19851386 Msa0061520:CDS
CTCTTCTGTTTGTAGTTAAT+TGG 0.176066 1_2:-19854576 Msa0061520:intron
CCCATCATTGCTCTTCCTTT+TGG 0.190630 1_2:+19852959 None:intergenic
AGCTTTCATATGAGAATATT+TGG 0.191630 1_2:-19855020 Msa0061520:CDS
GTTCAGCACGGGTGTCTTTC+AGG 0.203501 1_2:-19854204 Msa0061520:CDS
TTCACTCCATGCAGTTGTTT+TGG 0.213129 1_2:-19854432 Msa0061520:CDS
CAACACAGATTTGGATGTTT+TGG 0.216117 1_2:-19853293 Msa0061520:CDS
CTTAGAAATGGCATAGTTAT+TGG 0.221122 1_2:-19853757 Msa0061520:CDS
AGTCTTTCTCATGTAGTTAA+TGG 0.233808 1_2:-19852866 Msa0061520:CDS
TCCCAACTTGTAGTCATAAT+TGG 0.235213 1_2:+19851333 None:intergenic
GATGATGTGAAACTGTATTT+TGG 0.243659 1_2:-19855168 Msa0061520:CDS
TTCTATGCCGTCTGCCTTCC+AGG 0.246185 1_2:-19853410 Msa0061520:CDS
TGGCTTTCTCCTTCTTGATT+TGG 0.249778 1_2:+19850996 None:intergenic
GAAAGAAATGGTTCAACATT+AGG 0.258974 1_2:+19853049 None:intergenic
TCCATCAGAGAAGACATATT+TGG 0.262792 1_2:+19853489 None:intergenic
GGGACATCTACTTTGTTTGC+TGG 0.273457 1_2:-19852232 Msa0061520:CDS
GCTAGACTTGGACAATCTTT+TGG 0.274423 1_2:-19853580 Msa0061520:CDS
AATGATGCTGCAGACATTTA+GGG 0.280438 1_2:-19853026 Msa0061520:CDS
TCAATAAAATAGTTCTTAAA+AGG 0.281207 1_2:+19854489 None:intergenic
ATTTAGGGCCTCAAAACTTT+TGG 0.286623 1_2:-19853011 Msa0061520:CDS
TACAAAGTATCTATTGATTC+AGG 0.289065 1_2:-19854965 Msa0061520:intron
TTGTTCAATATTCTAACAAT+AGG 0.290114 1_2:-19852895 Msa0061520:CDS
GACAAAGGCACACGAGGTTT+TGG 0.296117 1_2:-19853134 Msa0061520:CDS
TGCAAATGCTGTTCGATTAC+GGG 0.303122 1_2:+19855344 None:intergenic
TATGTCTTCTCTGATGGAAT+TGG 0.304418 1_2:-19853484 Msa0061520:CDS
ATCTCCCATCCATTCCCTTA+TGG 0.306555 1_2:+19853636 None:intergenic
ACAATCGTTGAGTATGTAAT+TGG 0.310788 1_2:+19851723 None:intergenic
ACTTACCATCATAGTTACTA+TGG 0.312137 1_2:-19851088 Msa0061520:CDS
CGCATCCGAATCCCTTCTTT+TGG 0.315373 1_2:+19851231 None:intergenic
ACATTCTTTGATTTGTAGAT+AGG 0.317451 1_2:+19851508 None:intergenic
ACATCCAGATTGCAAGAAAA+AGG 0.321672 1_2:+19854294 None:intergenic
TTGCAAATGCTGTTCGATTA+CGG 0.331468 1_2:+19855343 None:intergenic
CGATTCAGACAACACAGATT+TGG 0.332074 1_2:-19853302 Msa0061520:CDS
CCCACTTAGGATTTCTGCTT+CGG 0.354344 1_2:+19851282 None:intergenic
GAAACTAGAACCCTAGAATA+TGG 0.354957 1_2:-19852926 Msa0061520:CDS
TACAAATCAAAGAATGTAAT+AGG 0.356384 1_2:-19851502 Msa0061520:CDS
TCGGTCACCGACTATATCTT+TGG 0.360311 1_2:-19854013 Msa0061520:CDS
AGCTCAACATTCTTTCTAGT+TGG 0.365437 1_2:+19854144 None:intergenic
GCTGCTGACCGTTGTAGTTT+CGG 0.366080 1_2:+19853549 None:intergenic
TCACTTCCCGAACATTCATT+TGG 0.366423 1_2:+19852263 None:intergenic
CTATTTAAAAGTTCGGGAAA+TGG 0.367680 1_2:-19855235 Msa0061520:CDS
GTACGGATCCATTGGTCATC+AGG 0.370357 1_2:+19854462 None:intergenic
ACCATGGAAAGCTGAGAAAA+TGG 0.375085 1_2:+19851038 None:intergenic
CAATAACTATGCCATTTCTA+AGG 0.379543 1_2:+19853758 None:intergenic
TTCTGCCAAACCTATTGTAT+TGG 0.383278 1_2:-19852162 Msa0061520:CDS
TGCCGTCTGCCTTCCAGGTT+CGG 0.385299 1_2:-19853405 Msa0061520:CDS
AACTCCTCGCCTCTTTCCTT+AGG 0.391172 1_2:+19851188 None:intergenic
CTTGTTTAAAGTTAATTCAT+TGG 0.391465 1_2:-19854226 Msa0061520:CDS
GGAGCTCCTATTTAAAAGTT+CGG 0.391789 1_2:-19855242 Msa0061520:CDS
ACCACATCCAAATGAATGTT+CGG 0.396067 1_2:-19852270 Msa0061520:CDS
TATATCTTTGGATAACGGTT+TGG 0.400522 1_2:-19854001 Msa0061520:CDS
ATTCTTTCCATCCTTAGAAA+TGG 0.402135 1_2:-19853769 Msa0061520:CDS
CACAGAATATCCAGATTTCA+TGG 0.402831 1_2:-19851545 Msa0061520:CDS
GAGCTCCTATTTAAAAGTTC+GGG 0.414378 1_2:-19855241 Msa0061520:CDS
TGTAGTTAATTGGTGCTCCT+CGG 0.416981 1_2:-19854566 Msa0061520:intron
TTTCACCAAAAGAAGGGATT+CGG 0.423158 1_2:-19851236 Msa0061520:CDS
GGCGGGGCTGATGTAGATGC+TGG 0.423579 1_2:-19851154 Msa0061520:CDS
TGTTCAATATTCTAACAATA+GGG 0.424933 1_2:-19852894 Msa0061520:CDS
ACATCATGATCCAATACAAT+AGG 0.434504 1_2:+19852152 None:intergenic
GTAGTTAATTGGTGCTCCTC+GGG 0.436292 1_2:-19854565 Msa0061520:intron
ATGTTTGCTCGTACACCAAC+TGG 0.437310 1_2:-19853673 Msa0061520:CDS
TCCAAAAGGAAGAGCAATGA+TGG 0.437443 1_2:-19852960 Msa0061520:CDS
GGACATCTACTTTGTTTGCT+GGG 0.438611 1_2:-19852231 Msa0061520:CDS
ACTTTAAACAAGATGTCAAA+TGG 0.439714 1_2:+19854237 None:intergenic
ACCAATTATGACTACAAGTT+GGG 0.440195 1_2:-19851334 Msa0061520:CDS
AGTAAAACAGTTGAGCTGTA+TGG 0.440670 1_2:-19855465 Msa0061520:CDS
ATGTCTTCTCTGATGGAATT+GGG 0.442636 1_2:-19853483 Msa0061520:CDS
TACTATGGTTTGTACAATGA+TGG 0.442932 1_2:-19851073 Msa0061520:CDS
ATGATCCAATACAATAGGTT+TGG 0.443886 1_2:+19852157 None:intergenic
TGCAGCATCATTGAAAGAAA+TGG 0.444498 1_2:+19853037 None:intergenic
CCGACTATATCTTTGGATAA+CGG 0.446812 1_2:-19854006 Msa0061520:CDS
GTTTGTCACCATTGCAGTAC+GGG 0.454323 1_2:-19855263 Msa0061520:CDS
ACTAGGATATTTATTCCAAA+AGG 0.454891 1_2:-19852974 Msa0061520:CDS
AATTCAAGGTATTTCAACTA+AGG 0.456722 1_2:-19851464 Msa0061520:CDS
ACCAAATATGTCTTCTCTGA+TGG 0.456825 1_2:-19853490 Msa0061520:CDS
TCTTGATTTGGACAAGCAAA+TGG 0.456873 1_2:+19851008 None:intergenic
AGGTATTTCTGCTGGGATAC+CGG 0.459811 1_2:+19851582 None:intergenic
GGATTCGGATGCGATTACTA+TGG 0.460760 1_2:-19851221 Msa0061520:CDS
CCACATCCAAATGAATGTTC+GGG 0.464069 1_2:-19852269 Msa0061520:CDS
TTCTCATGTAGTTAATGGTA+AGG 0.466581 1_2:-19852861 Msa0061520:CDS
CCTTCCAGGTTCGGTATGGC+GGG 0.467656 1_2:-19853396 Msa0061520:CDS
CTGATCTTTCAGCCATCTCA+CGG 0.468798 1_2:+19854068 None:intergenic
AGATTTGTAGAGCAGTATAC+TGG 0.471303 1_2:-19855408 Msa0061520:CDS
CAAAATCTTTCACCAAAAGA+AGG 0.471883 1_2:-19851243 Msa0061520:CDS
AACCAATTATGACTACAAGT+TGG 0.472437 1_2:-19851335 Msa0061520:CDS
GCTAAATATGCTGCTAGACT+TGG 0.472983 1_2:-19853592 Msa0061520:CDS
GAGATACCGCTGGATCCATA+AGG 0.474376 1_2:-19853651 Msa0061520:CDS
CCCGAACATTCATTTGGATG+TGG 0.475636 1_2:+19852269 None:intergenic
ACTCCTCGCCTCTTTCCTTA+GGG 0.475778 1_2:+19851189 None:intergenic
AACTATGCCATTTCTAAGGA+TGG 0.476554 1_2:+19853762 None:intergenic
CTGAAGGAGATGCTTATTTG+TGG 0.476713 1_2:-19853079 Msa0061520:CDS
ACATCACCTGGGTGCAAGCA+CGG 0.476835 1_2:+19852821 None:intergenic
AAATATCTCTTGAACTTGCC+AGG 0.478082 1_2:-19853459 Msa0061520:CDS
TGTACCCGCCATACCGAACC+TGG 0.478634 1_2:+19853392 None:intergenic
TACATACTCAACGATTGTCT+TGG 0.479387 1_2:-19851718 Msa0061520:CDS
TTCAAAACACGAACATCACC+TGG 0.479689 1_2:+19852809 None:intergenic
TTAGATTGACATCATTTACT+TGG 0.479691 1_2:-19855580 Msa0061520:five_prime_UTR
GTCCCCATGGTTGCTCCTCA+AGG 0.480760 1_2:-19854270 Msa0061520:CDS
AGACGACGAGGTATTTCTGC+TGG 0.480811 1_2:+19851574 None:intergenic
AGAAAAGATGTACTATTCAA+AGG 0.481118 1_2:-19854106 Msa0061520:CDS
TTCGTTTGTTGACGAGGAGT+TGG 0.481183 1_2:-19853860 Msa0061520:CDS
GGAAATCTGATGGACTACTA+TGG 0.482352 1_2:-19851313 Msa0061520:CDS
CAAGGTATTTCAACTAAGGA+TGG 0.483688 1_2:-19851460 Msa0061520:CDS
CATCACCTGGGTGCAAGCAC+GGG 0.486653 1_2:+19852822 None:intergenic
GGAGTTGGTTCAATGACGGC+GGG 0.487219 1_2:-19851171 Msa0061520:CDS
GCCTTCCAGGTTCGGTATGG+CGG 0.487625 1_2:-19853397 Msa0061520:CDS
AAGCCGTCGAATTCCATGTC+TGG 0.489157 1_2:+19851391 None:intergenic
CGATTTGAGACATTGATCTC+TGG 0.490515 1_2:+19853928 None:intergenic
ACGGTTTGGTATATGTTCGC+AGG 0.491682 1_2:-19853987 Msa0061520:CDS
GCTCGAATGCATCCTCATCC+TGG 0.493536 1_2:+19850976 None:intergenic
AAACAACACAATCCACCATA+TGG 0.494194 1_2:+19852762 None:intergenic
TGTGCCAGCTTTGCGCCATA+TGG 0.496691 1_2:-19852777 Msa0061520:CDS
AGGTTCTTTGTCTGCAAAGA+CGG 0.496746 1_2:+19851675 None:intergenic
GTTTGAATGTCTTATTGTCA+TGG 0.500412 1_2:+19855046 None:intergenic
TTGGGATTGGAATGAGAAAG+TGG 0.506648 1_2:-19855083 Msa0061520:CDS
TCTACAAATCTCTTTACATC+AGG 0.508391 1_2:+19855420 None:intergenic
AGATCATGCTACAGATATGA+TGG 0.508791 1_2:-19855301 Msa0061520:CDS
GATTGAGCTGCATCAGCCAC+GGG 0.510977 1_2:-19854995 Msa0061520:CDS
TCCACCATATGGCGCAAAGC+TGG 0.512736 1_2:+19852773 None:intergenic
TCAGGCACGGTCACATAATG+AGG 0.513553 1_2:+19855438 None:intergenic
TTTATCTTCACGTATTTCCG+TGG 0.516397 1_2:-19853818 Msa0061520:CDS
TGGAACAAAGTTTCAGTCGC+AGG 0.517680 1_2:-19850952 Msa0061520:CDS
TGGATCCATAAGGGAATGGA+TGG 0.518554 1_2:-19853641 Msa0061520:CDS
GAGATATTGTTCCAAGGCCA+AGG 0.519330 1_2:-19855209 Msa0061520:CDS
GACCGTTGTAGTTTCGGTAG+AGG 0.520868 1_2:+19853555 None:intergenic
GATCCACTCTCCAATGTGTA+TGG 0.521155 1_2:+19854318 None:intergenic
TATTTAGGAAAATCAAAAGA+TGG 0.522810 1_2:-19855493 Msa0061520:exon
GTTCGGGAAGTGATCTTGAT+GGG 0.522949 1_2:-19852253 Msa0061520:CDS
TACATCATTCACACTTGAAG+TGG 0.526578 1_2:-19851431 Msa0061520:CDS
GTCTTTGCAGACAAAGAACC+TGG 0.526811 1_2:-19851673 Msa0061520:CDS
TTGGCAGAATCATACTCCAT+TGG 0.527097 1_2:+19852176 None:intergenic
CTATGGCTGTAAGGTCCCTA+AGG 0.529617 1_2:-19851204 Msa0061520:CDS
TACGGATCCATTGGTCATCA+GGG 0.530740 1_2:+19854463 None:intergenic
ATGAAATCTGGATATTCTGT+GGG 0.530843 1_2:+19851547 None:intergenic
GCTCATTACGAGGAAAGTGC+GGG 0.532321 1_2:-19854342 Msa0061520:CDS
AAAATCTTTCACCAAAAGAA+GGG 0.534524 1_2:-19851242 Msa0061520:CDS
AGAAGGAGAAAGCCAGGATG+AGG 0.535312 1_2:-19850988 Msa0061520:CDS
CTACAAGTTGGGAAATCTGA+TGG 0.542458 1_2:-19851323 Msa0061520:CDS
ATGCGATTACTATGGCTGTA+AGG 0.542526 1_2:-19851213 Msa0061520:CDS
AATCTATTGTACGGATCCAT+TGG 0.543493 1_2:+19854454 None:intergenic
TAAGGAAAGAGGCGAGGAGT+TGG 0.543723 1_2:-19851186 Msa0061520:CDS
CATGAAATCTGGATATTCTG+TGG 0.544047 1_2:+19851546 None:intergenic
TGCTCATTACGAGGAAAGTG+CGG 0.544258 1_2:-19854343 Msa0061520:CDS
TCTGCCTTCCAGGTTCGGTA+TGG 0.544848 1_2:-19853400 Msa0061520:CDS
GTTCGGTATGGCGGGTACAA+AGG 0.545736 1_2:-19853388 Msa0061520:CDS
ACGTGTTTCGTTTGTTGACG+AGG 0.550365 1_2:-19853866 Msa0061520:CDS
ATTCCTTGAGGAGCAACCAT+GGG 0.551562 1_2:+19854267 None:intergenic
ACCTCGAACAATTGATCCAA+TGG 0.552767 1_2:-19852192 Msa0061520:CDS
AAATCAAGAAGGAGAAAGCC+AGG 0.553320 1_2:-19850994 Msa0061520:CDS
AGTTTGTCACCATTGCAGTA+CGG 0.554616 1_2:-19855264 Msa0061520:CDS
CTTATGCAAAAGCTTCTGCT+TGG 0.557765 1_2:-19851120 Msa0061520:CDS
CAATCTGGATGTTGTCCCCA+TGG 0.558090 1_2:-19854283 Msa0061520:CDS
ATTCACACTTGAAGTGGCTA+AGG 0.558599 1_2:-19851425 Msa0061520:CDS
GTTAATTCATTGGTTCAGCA+CGG 0.559458 1_2:-19854216 Msa0061520:CDS
AGATACCGCTGGATCCATAA+GGG 0.559980 1_2:-19853650 Msa0061520:CDS
TGCAAAGACGGTGTGTGCAT+TGG 0.560064 1_2:+19851687 None:intergenic
TTATATGCATCATCTGAAGT+AGG 0.561230 1_2:+19854525 None:intergenic
TGTTCGGGAAGTGATCTTGA+TGG 0.561954 1_2:-19852254 Msa0061520:CDS
CCACAAAAGTATACTTTGCA+AGG 0.563345 1_2:+19853952 None:intergenic
CTTATCCACTCTTGATGTCA+AGG 0.563615 1_2:-19853221 Msa0061520:CDS
CCGCTGGATCCATAAGGGAA+TGG 0.564392 1_2:-19853645 Msa0061520:CDS
AGATTGAGCTGCATCAGCCA+CGG 0.566095 1_2:-19854996 Msa0061520:CDS
GCGGGGCTGATGTAGATGCT+GGG 0.566559 1_2:-19851153 Msa0061520:CDS
TCTTCACGTATTTCCGTGGG+TGG 0.569260 1_2:-19853814 Msa0061520:CDS
AATTCCTTGAGGAGCAACCA+TGG 0.571062 1_2:+19854266 None:intergenic
GTACAATGATGGTATGCAAA+GGG 0.571276 1_2:-19851062 Msa0061520:CDS
CGGTTTGGTATATGTTCGCA+GGG 0.571657 1_2:-19853986 Msa0061520:CDS
GAACCTGGAAAAGCAATGGC+AGG 0.572762 1_2:-19851658 Msa0061520:CDS
ATGGAGTGAAATCTATTGTA+CGG 0.574202 1_2:+19854445 None:intergenic
TCCATTGGATCAATTGTTCG+AGG 0.574408 1_2:+19852191 None:intergenic
TGATCTTTCAGCCATCTCAC+GGG 0.575057 1_2:+19854069 None:intergenic
TTAATTCATTGGTTCAGCAC+GGG 0.576593 1_2:-19854215 Msa0061520:CDS
TACCGAACCTGGAAGGCAGA+CGG 0.577968 1_2:+19853403 None:intergenic
TGACAAACTTCTGCTAGGTA+AGG 0.579392 1_2:+19855278 None:intergenic
GACAACTTCACCGATGAGGT+TGG 0.580272 1_2:+19853349 None:intergenic
GCCAGCTTTGCGCCATATGG+TGG 0.580852 1_2:-19852774 Msa0061520:CDS
ACAAACCATAGTAACTATGA+TGG 0.581319 1_2:+19851083 None:intergenic
TGTAAGGTCCCTAAGGAAAG+AGG 0.581946 1_2:-19851197 Msa0061520:CDS
GGATCATGATGTGGAGATTG+AGG 0.583073 1_2:-19852141 Msa0061520:intron
GATGAGGATGCATTCGAGCA+TGG 0.583156 1_2:-19850972 Msa0061520:CDS
TTCGGAAAATCTCTGCTGCT+AGG 0.585712 1_2:+19854381 None:intergenic
GAGGTGGATTATTTGAACTA+CGG 0.587126 1_2:+19854034 None:intergenic
TTTGCTTGTCCAAATCAAGA+AGG 0.588553 1_2:-19851005 Msa0061520:CDS
ACACCAACTGGAGATACCGC+TGG 0.589986 1_2:-19853661 Msa0061520:CDS
ACCGAAGCAGAAATCCTAAG+TGG 0.593207 1_2:-19851283 Msa0061520:CDS
AATGGAATTTGAATTCCTTG+AGG 0.596481 1_2:+19854255 None:intergenic
TTATCTTCACGTATTTCCGT+GGG 0.598036 1_2:-19853817 Msa0061520:CDS
CCGTTATCCAAAGATATAGT+CGG 0.598437 1_2:+19854006 None:intergenic
CAGAATATTAGTGATCTCCC+CGG 0.599665 1_2:+19853099 None:intergenic
TAGGAGCTCCCGTACTGCAA+TGG 0.599827 1_2:+19855255 None:intergenic
GTTGCTATAAAGATAAGAGA+AGG 0.600335 1_2:-19855372 Msa0061520:CDS
GGAGATCACTAATATTCTGA+AGG 0.602889 1_2:-19853095 Msa0061520:CDS
GACTGCCCAAAACAACTGCA+TGG 0.603792 1_2:+19854426 None:intergenic
CCAAAAGGAAGAGCAATGAT+GGG 0.604423 1_2:-19852959 Msa0061520:CDS
GACGACGAGGTATTTCTGCT+GGG 0.605891 1_2:+19851575 None:intergenic
TCTGTTATGAACCCGTGAGA+TGG 0.606365 1_2:-19854080 Msa0061520:CDS
AATGGTGACAAACTTCTGCT+AGG 0.606850 1_2:+19855273 None:intergenic
AATGTCCTTGACATCAAGAG+TGG 0.609518 1_2:+19853216 None:intergenic
CAAAGAACCTGGAAAAGCAA+TGG 0.611171 1_2:-19851662 Msa0061520:CDS
TCTTGAACTTGCCAGGAGAG+TGG 0.617568 1_2:-19853452 Msa0061520:CDS
GATCCAGCGGTATCTCCAGT+TGG 0.618809 1_2:+19853658 None:intergenic
GGCTGTTGATCCAACCTCAT+CGG 0.619301 1_2:-19853359 Msa0061520:CDS
TGGCGGGTACAAAGGAGTTG+TGG 0.620817 1_2:-19853380 Msa0061520:CDS
ATTGGATCAATTGTTCGAGG+TGG 0.621802 1_2:+19852194 None:intergenic
GCGAGGAGTTGGTTCAATGA+CGG 0.622019 1_2:-19851175 Msa0061520:CDS
AGCTTTGCAAGTTCAACACA+TGG 0.622784 1_2:+19851634 None:intergenic
AGATATTGTTCCAAGGCCAA+GGG 0.622935 1_2:-19855208 Msa0061520:CDS
AGTTGCGTGAAAGTTCGCTA+TGG 0.625963 1_2:-19853696 Msa0061520:CDS
TGGAAAGAGATATTGTTCCA+AGG 0.625967 1_2:-19855215 Msa0061520:CDS
AACTGTCGATTCAGATAACA+AGG 0.626566 1_2:+19853253 None:intergenic
GATCCAGACATGGAATTCGA+CGG 0.628180 1_2:-19851394 Msa0061520:CDS
CCATTCCCTTATGGATCCAG+CGG 0.628575 1_2:+19853645 None:intergenic
TGTACAATGATGGTATGCAA+AGG 0.628825 1_2:-19851063 Msa0061520:CDS
AGGAGTTGGTTCAATGACGG+CGG 0.630864 1_2:-19851172 Msa0061520:CDS
CCCGCCATACCGAACCTGGA+AGG 0.632312 1_2:+19853396 None:intergenic
GGTCCATACACATTGGAGAG+TGG 0.632421 1_2:-19854321 Msa0061520:CDS
GATATAGTCGGTGACCGAGG+TGG 0.633494 1_2:+19854018 None:intergenic
AGATTCGACAAAGGCACACG+AGG 0.638691 1_2:-19853140 Msa0061520:CDS
TATTGTATTGGATCATGATG+TGG 0.640414 1_2:-19852150 Msa0061520:CDS
CCGAAGCAGAAATCCTAAGT+GGG 0.641056 1_2:-19851282 Msa0061520:CDS
TATATCAGTTCTTCCACCCA+CGG 0.641492 1_2:+19853801 None:intergenic
AGCAAATGGTAAACACACCA+TGG 0.644967 1_2:+19851022 None:intergenic
TTTGGACTTGATGTCTTCCG+GGG 0.650957 1_2:-19853116 Msa0061520:CDS
CGGATCCATTGGTCATCAGG+GGG 0.656023 1_2:+19854465 None:intergenic
AAATCTCTTTACATCAGGCA+CGG 0.656840 1_2:+19855425 None:intergenic
CAGGCACGGTCACATAATGA+GGG 0.657015 1_2:+19855439 None:intergenic
TTCGGGAAGTGATCTTGATG+GGG 0.658230 1_2:-19852252 Msa0061520:CDS
AATACTAACAGATTCGACAA+AGG 0.661843 1_2:-19853149 Msa0061520:CDS
GGTCCCTAAGGAAAGAGGCG+AGG 0.663632 1_2:-19851192 Msa0061520:CDS
GGATCCATAAGGGAATGGAT+GGG 0.665338 1_2:-19853640 Msa0061520:CDS
ACGGATCCATTGGTCATCAG+GGG 0.669377 1_2:+19854464 None:intergenic
CAGTGACAACTTCACCGATG+AGG 0.671258 1_2:+19853345 None:intergenic
GGAAAACTTTGCTCATTACG+AGG 0.671589 1_2:-19854352 Msa0061520:CDS
AAAGATATAGTCGGTGACCG+AGG 0.682239 1_2:+19854015 None:intergenic
TTCCTCTACCGAAACTACAA+CGG 0.682807 1_2:-19853557 Msa0061520:CDS
TTCCTTGAGGAGCAACCATG+GGG 0.685086 1_2:+19854268 None:intergenic
TCAAAACACGAACATCACCT+GGG 0.687693 1_2:+19852810 None:intergenic
AAGTGCGGGTCCATACACAT+TGG 0.697196 1_2:-19854328 Msa0061520:CDS
TGAAATCTGGATATTCTGTG+GGG 0.715614 1_2:+19851548 None:intergenic
GGAGTCGTATGATCCAGACA+TGG 0.719837 1_2:-19851404 Msa0061520:CDS
GAGTTGGTTCAATGACGGCG+GGG 0.736958 1_2:-19851170 Msa0061520:CDS
ATTGAGCTGCATCAGCCACG+GGG 0.745981 1_2:-19854994 Msa0061520:CDS
CATCGGTGAAGTTGTCACTG+AGG 0.748282 1_2:-19853342 Msa0061520:CDS
GTATACTGGTGAAAGAAGTG+TGG 0.750231 1_2:-19855394 Msa0061520:CDS
GTAGTTCAAATAATCCACCT+CGG 0.751486 1_2:-19854032 Msa0061520:CDS
TCTGTGGGGATAAGACGACG+AGG 0.799851 1_2:+19851562 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATACAAAATTTGAAATAAAA+AGG + chr1_2:19851633-19851652 None:intergenic 10.0%
!! TCTAATATAAGTTAATAAAA+TGG - chr1_2:19854744-19854763 Msa0061520:intron 10.0%
!! TCAATAAAATAGTTCTTAAA+AGG + chr1_2:19852036-19852055 None:intergenic 15.0%
!! AAAAAAAGTAAATTTAAGGA+TGG + chr1_2:19854042-19854061 None:intergenic 15.0%
!! TGCAAAAAAAAGTAAATTTA+AGG + chr1_2:19854046-19854065 None:intergenic 15.0%
!!! AATATTTTGCAGTTATTTAT+AGG - chr1_2:19854113-19854132 Msa0061520:CDS 15.0%
!!! TATCATTTAGAATGTTATTT+TGG - chr1_2:19854138-19854157 Msa0061520:CDS 15.0%
!!! TTTATCTTGTATTTTATGTA+TGG - chr1_2:19854436-19854455 Msa0061520:CDS 15.0%
!!! TTTTATTATAAGTTGAAAAG+GGG + chr1_2:19854555-19854574 None:intergenic 15.0%
!!! CTTTTATTATAAGTTGAAAA+GGG + chr1_2:19854556-19854575 None:intergenic 15.0%
!!! TCTTTTATTATAAGTTGAAA+AGG + chr1_2:19854557-19854576 None:intergenic 15.0%
!!! ATCTTTTGATTTTCCTAAAT+AGG + chr1_2:19851030-19851049 None:intergenic 20.0%
!! TATTTAGGAAAATCAAAAGA+TGG - chr1_2:19851029-19851048 Msa0061520:CDS 20.0%
!!! AGAAAAGATTATCTGTTTTA+TGG - chr1_2:19851391-19851410 Msa0061520:CDS 20.0%
!!! CTTGTTTAAAGTTAATTCAT+TGG - chr1_2:19852296-19852315 Msa0061520:intron 20.0%
!! GCGTAAATACAAAAAATATA+TGG - chr1_2:19852623-19852642 Msa0061520:intron 20.0%
!!! ATTTAGCTACATTTTTTATG+CGG + chr1_2:19852917-19852936 None:intergenic 20.0%
!! TTGTTCAATATTCTAACAAT+AGG - chr1_2:19853627-19853646 Msa0061520:CDS 20.0%
!! TGTTCAATATTCTAACAATA+GGG - chr1_2:19853628-19853647 Msa0061520:CDS 20.0%
!! ATCAAAATAGGAATCTTAAA+AGG + chr1_2:19853916-19853935 None:intergenic 20.0%
!! AGAAAAAAACTTAACTATAG+AGG + chr1_2:19854189-19854208 None:intergenic 20.0%
!! AAGTTAATAAAATGGTTTCA+TGG - chr1_2:19854752-19854771 Msa0061520:intron 20.0%
!! TACAAATCAAAGAATGTAAT+AGG - chr1_2:19855020-19855039 Msa0061520:CDS 20.0%
!!! ATGTAATAGGAAAACTTTTT+AGG - chr1_2:19855033-19855052 Msa0061520:CDS 20.0%
!!! TGTAATAGGAAAACTTTTTA+GGG - chr1_2:19855034-19855053 Msa0061520:CDS 20.0%
! TTAGATTGACATCATTTACT+TGG - chr1_2:19850942-19850961 Msa0061520:CDS 25.0%
!! TTGATTTTCCTAAATAGGAT+AGG + chr1_2:19851025-19851044 None:intergenic 25.0%
! AGCTTTCATATGAGAATATT+TGG - chr1_2:19851502-19851521 Msa0061520:CDS 25.0%
!!! TACAAAGTATCTATTGATTC+AGG - chr1_2:19851557-19851576 Msa0061520:CDS 25.0%
! AAAAAGGAAAATGAAGAACA+TGG + chr1_2:19851617-19851636 None:intergenic 25.0%
!! ATTGGTTTATGGTACATTTA+TGG - chr1_2:19851754-19851773 Msa0061520:intron 25.0%
! ATATAATACAACACAACACA+TGG + chr1_2:19851792-19851811 None:intergenic 25.0%
! GTTGTATTATATAGCTAGAT+TGG - chr1_2:19851800-19851819 Msa0061520:intron 25.0%
! ACTTTAAACAAGATGTCAAA+TGG + chr1_2:19852288-19852307 None:intergenic 25.0%
! AGAAAAGATGTACTATTCAA+AGG - chr1_2:19852416-19852435 Msa0061520:intron 25.0%
! ACTAGGATATTTATTCCAAA+AGG - chr1_2:19853548-19853567 Msa0061520:CDS 25.0%
! AAAAACTTCACCATATTCTA+GGG + chr1_2:19853609-19853628 None:intergenic 25.0%
!! ATCATCTTCACTTCTTTTAA+CGG - chr1_2:19853934-19853953 Msa0061520:CDS 25.0%
! ACTAAAAGATTTATACCATG+TGG + chr1_2:19854590-19854609 None:intergenic 25.0%
!! TCAGTTAAGTATGAATCTTT+TGG + chr1_2:19854699-19854718 None:intergenic 25.0%
!!! ACATTCTTTGATTTGTAGAT+AGG + chr1_2:19855017-19855036 None:intergenic 25.0%
!!! AAACTTTTTAGGGAAATTCA+AGG - chr1_2:19855044-19855063 Msa0061520:CDS 25.0%
!! AATTCAAGGTATTTCAACTA+AGG - chr1_2:19855058-19855077 Msa0061520:CDS 25.0%
!! TTTTCATAATATTCCCACTT+AGG + chr1_2:19855256-19855275 None:intergenic 25.0%
! AAAATCTTTCACCAAAAGAA+GGG - chr1_2:19855280-19855299 Msa0061520:CDS 25.0%
TTTCTTCTCCTATCCTATTT+AGG - chr1_2:19851014-19851033 Msa0061520:CDS 30.0%
TCTACAAATCTCTTTACATC+AGG + chr1_2:19851105-19851124 None:intergenic 30.0%
GTTGCTATAAAGATAAGAGA+AGG - chr1_2:19851150-19851169 Msa0061520:CDS 30.0%
! CATTTCCCGAACTTTTAAAT+AGG + chr1_2:19851289-19851308 None:intergenic 30.0%
CTATTTAAAAGTTCGGGAAA+TGG - chr1_2:19851287-19851306 Msa0061520:CDS 30.0%
! GATGATGTGAAACTGTATTT+TGG - chr1_2:19851354-19851373 Msa0061520:CDS 30.0%
! ATTATCTGTTTTATGGAGAG+AGG - chr1_2:19851398-19851417 Msa0061520:CDS 30.0%
!! AGGATGTTAGAGTTGATTTT+GGG - chr1_2:19851421-19851440 Msa0061520:CDS 30.0%
! GTTTGAATGTCTTATTGTCA+TGG + chr1_2:19851479-19851498 None:intergenic 30.0%
ATGCATTAAATGCAACAAAC+AGG + chr1_2:19851666-19851685 None:intergenic 30.0%
!! ATCTCAAGAACATTGGTTTA+TGG - chr1_2:19851743-19851762 Msa0061520:CDS 30.0%
CTCTTCTGTTTGTAGTTAAT+TGG - chr1_2:19851946-19851965 Msa0061520:intron 30.0%
! TTATATGCATCATCTGAAGT+AGG + chr1_2:19852000-19852019 None:intergenic 30.0%
ATGGAGTGAAATCTATTGTA+CGG + chr1_2:19852080-19852099 None:intergenic 30.0%
AATGGAATTTGAATTCCTTG+AGG + chr1_2:19852270-19852289 None:intergenic 30.0%
! TATATCTTTGGATAACGGTT+TGG - chr1_2:19852521-19852540 Msa0061520:intron 30.0%
ATTCTTTCCATCCTTAGAAA+TGG - chr1_2:19852753-19852772 Msa0061520:CDS 30.0%
! CAATAACTATGCCATTTCTA+AGG + chr1_2:19852767-19852786 None:intergenic 30.0%
CTTAGAAATGGCATAGTTAT+TGG - chr1_2:19852765-19852784 Msa0061520:CDS 30.0%
! TTTTGGCATGTAGTAAGTTT+CGG - chr1_2:19853246-19853265 Msa0061520:CDS 30.0%
AATACTAACAGATTCGACAA+AGG - chr1_2:19853373-19853392 Msa0061520:CDS 30.0%
GAAAGAAATGGTTCAACATT+AGG + chr1_2:19853476-19853495 None:intergenic 30.0%
CAAAAACTTCACCATATTCT+AGG + chr1_2:19853610-19853629 None:intergenic 30.0%
AGTCTTTCTCATGTAGTTAA+TGG - chr1_2:19853656-19853675 Msa0061520:CDS 30.0%
TTCTCATGTAGTTAATGGTA+AGG - chr1_2:19853661-19853680 Msa0061520:CDS 30.0%
GAAGTGAAGATGATCAAAAT+AGG + chr1_2:19853928-19853947 None:intergenic 30.0%
! TGGATGAGTTTTTCTTCAAT+GGG + chr1_2:19854078-19854097 None:intergenic 30.0%
!! ATATTTTAAGCCTACTTCTC+TGG + chr1_2:19854098-19854117 None:intergenic 30.0%
!!! TAGAATGTTATTTTGGCAAG+TGG - chr1_2:19854145-19854164 Msa0061520:CDS 30.0%
ATGATCCAATACAATAGGTT+TGG + chr1_2:19854368-19854387 None:intergenic 30.0%
ACATCATGATCCAATACAAT+AGG + chr1_2:19854373-19854392 None:intergenic 30.0%
TATTGTATTGGATCATGATG+TGG - chr1_2:19854372-19854391 Msa0061520:CDS 30.0%
ATATTAGAATGCATGTTGCA+GGG + chr1_2:19854732-19854751 None:intergenic 30.0%
TATATTAGAATGCATGTTGC+AGG + chr1_2:19854733-19854752 None:intergenic 30.0%
ACAATCGTTGAGTATGTAAT+TGG + chr1_2:19854802-19854821 None:intergenic 30.0%
ATGAAATCTGGATATTCTGT+GGG + chr1_2:19854978-19854997 None:intergenic 30.0%
! TTATGCTTTTCCATGAAATC+TGG + chr1_2:19854990-19855009 None:intergenic 30.0%
AACCAATTATGACTACAAGT+TGG - chr1_2:19855187-19855206 Msa0061520:CDS 30.0%
ACCAATTATGACTACAAGTT+GGG - chr1_2:19855188-19855207 Msa0061520:CDS 30.0%
CAAAATCTTTCACCAAAAGA+AGG - chr1_2:19855279-19855298 Msa0061520:CDS 30.0%
ACTTACCATCATAGTTACTA+TGG - chr1_2:19855434-19855453 Msa0061520:CDS 30.0%
ACAAACCATAGTAACTATGA+TGG + chr1_2:19855442-19855461 None:intergenic 30.0%
! TACTATGGTTTGTACAATGA+TGG - chr1_2:19855449-19855468 Msa0061520:CDS 30.0%
AGTAAAACAGTTGAGCTGTA+TGG - chr1_2:19851057-19851076 Msa0061520:CDS 35.0%
AAATCTCTTTACATCAGGCA+CGG + chr1_2:19851100-19851119 None:intergenic 35.0%
AGATTTGTAGAGCAGTATAC+TGG - chr1_2:19851114-19851133 Msa0061520:CDS 35.0%
TTGCAAATGCTGTTCGATTA+CGG + chr1_2:19851182-19851201 None:intergenic 35.0%
AGATCATGCTACAGATATGA+TGG - chr1_2:19851221-19851240 Msa0061520:CDS 35.0%
GGAGCTCCTATTTAAAAGTT+CGG - chr1_2:19851280-19851299 Msa0061520:CDS 35.0%
GAGCTCCTATTTAAAAGTTC+GGG - chr1_2:19851281-19851300 Msa0061520:CDS 35.0%
TGGAAAGAGATATTGTTCCA+AGG - chr1_2:19851307-19851326 Msa0061520:CDS 35.0%
AAACTGTGCAAAAATTCCCT+TGG + chr1_2:19851333-19851352 None:intergenic 35.0%
! AAGGGAATTTTTGCACAGTT+TGG - chr1_2:19851332-19851351 Msa0061520:CDS 35.0%
!! GAGGATGTTAGAGTTGATTT+TGG - chr1_2:19851420-19851439 Msa0061520:CDS 35.0%
!!! GTTAGAGTTGATTTTGGGAT+TGG - chr1_2:19851426-19851445 Msa0061520:CDS 35.0%
TTCTTGAGATCACTAAGCTT+GGG + chr1_2:19851733-19851752 None:intergenic 35.0%
CTTAGTGATCTCAAGAACAT+TGG - chr1_2:19851736-19851755 Msa0061520:CDS 35.0%
CTTACTGAACATGAGATGAA+AGG + chr1_2:19851865-19851884 None:intergenic 35.0%
AATCTATTGTACGGATCCAT+TGG + chr1_2:19852071-19852090 None:intergenic 35.0%
! CAGAGATTTTCCGAATTTCA+GGG - chr1_2:19852149-19852168 Msa0061520:CDS 35.0%
! GCAAAGTTTTCCCTGAAATT+CGG + chr1_2:19852162-19852181 None:intergenic 35.0%
ACATCCAGATTGCAAGAAAA+AGG + chr1_2:19852231-19852250 None:intergenic 35.0%
!! GTTAATTCATTGGTTCAGCA+CGG - chr1_2:19852306-19852325 Msa0061520:intron 35.0%
!! TTAATTCATTGGTTCAGCAC+GGG - chr1_2:19852307-19852326 Msa0061520:intron 35.0%
! AGCTCAACATTCTTTCTAGT+TGG + chr1_2:19852381-19852400 None:intergenic 35.0%
!! GAGGTGGATTATTTGAACTA+CGG + chr1_2:19852491-19852510 None:intergenic 35.0%
GTAGTTCAAATAATCCACCT+CGG - chr1_2:19852490-19852509 Msa0061520:intron 35.0%
CCGTTATCCAAAGATATAGT+CGG + chr1_2:19852519-19852538 None:intergenic 35.0%
CCGACTATATCTTTGGATAA+CGG - chr1_2:19852516-19852535 Msa0061520:intron 35.0%
! CCACAAAAGTATACTTTGCA+AGG + chr1_2:19852573-19852592 None:intergenic 35.0%
! CCTTGCAAAGTATACTTTTG+TGG - chr1_2:19852570-19852589 Msa0061520:intron 35.0%
TTTATCTTCACGTATTTCCG+TGG - chr1_2:19852704-19852723 Msa0061520:intron 35.0%
TTATCTTCACGTATTTCCGT+GGG - chr1_2:19852705-19852724 Msa0061520:intron 35.0%
! AACTATGCCATTTCTAAGGA+TGG + chr1_2:19852763-19852782 None:intergenic 35.0%
ACCAAATATGTCTTCTCTGA+TGG - chr1_2:19853032-19853051 Msa0061520:CDS 35.0%
TCCATCAGAGAAGACATATT+TGG + chr1_2:19853036-19853055 None:intergenic 35.0%
TATGTCTTCTCTGATGGAAT+TGG - chr1_2:19853038-19853057 Msa0061520:CDS 35.0%
ATGTCTTCTCTGATGGAATT+GGG - chr1_2:19853039-19853058 Msa0061520:CDS 35.0%
AAATATCTCTTGAACTTGCC+AGG - chr1_2:19853063-19853082 Msa0061520:CDS 35.0%
! CAACACAGATTTGGATGTTT+TGG - chr1_2:19853229-19853248 Msa0061520:CDS 35.0%
!! AACTGTCGATTCAGATAACA+AGG + chr1_2:19853272-19853291 None:intergenic 35.0%
GGAGATCACTAATATTCTGA+AGG - chr1_2:19853427-19853446 Msa0061520:CDS 35.0%
TGCAGCATCATTGAAAGAAA+TGG + chr1_2:19853488-19853507 None:intergenic 35.0%
AATGATGCTGCAGACATTTA+GGG - chr1_2:19853496-19853515 Msa0061520:CDS 35.0%
!! ATTTAGGGCCTCAAAACTTT+TGG - chr1_2:19853511-19853530 Msa0061520:CDS 35.0%
!!! CCTCAAAACTTTTGGAATTG+CGG - chr1_2:19853519-19853538 Msa0061520:CDS 35.0%
GAAACTAGAACCCTAGAATA+TGG - chr1_2:19853596-19853615 Msa0061520:CDS 35.0%
AAACAACACAATCCACCATA+TGG + chr1_2:19853763-19853782 None:intergenic 35.0%
!!! TGTGTTGTTTTCCCTCAAAA+AGG - chr1_2:19853773-19853792 Msa0061520:CDS 35.0%
! CTGGATGAGTTTTTCTTCAA+TGG + chr1_2:19854079-19854098 None:intergenic 35.0%
AAAAACTCATCCAGAGAAGT+AGG - chr1_2:19854085-19854104 Msa0061520:CDS 35.0%
ACCACATCCAAATGAATGTT+CGG - chr1_2:19854252-19854271 Msa0061520:CDS 35.0%
TTCTGCCAAACCTATTGTAT+TGG - chr1_2:19854360-19854379 Msa0061520:CDS 35.0%
!!! TCCTTTTAGCTTTACATCTG+TGG - chr1_2:19854409-19854428 Msa0061520:CDS 35.0%
!!! CCTTTTAGCTTTACATCTGT+GGG - chr1_2:19854410-19854429 Msa0061520:CDS 35.0%
!! TCTTTTAGTTATCACCCCTT+TGG - chr1_2:19854601-19854620 Msa0061520:intron 35.0%
GAGCAATAATTGTTTCAGCT+AGG - chr1_2:19854655-19854674 Msa0061520:intron 35.0%
TTTCAGCTAGGATTCAAACT+CGG - chr1_2:19854667-19854686 Msa0061520:intron 35.0%
ATAAAATGGTTTCATGGTGC+AGG - chr1_2:19854758-19854777 Msa0061520:intron 35.0%
TACATACTCAACGATTGTCT+TGG - chr1_2:19854804-19854823 Msa0061520:intron 35.0%
TGAAATCTGGATATTCTGTG+GGG + chr1_2:19854977-19854996 None:intergenic 35.0%
CATGAAATCTGGATATTCTG+TGG + chr1_2:19854979-19854998 None:intergenic 35.0%
CACAGAATATCCAGATTTCA+TGG - chr1_2:19854977-19854996 Msa0061520:CDS 35.0%
! CAAGGTATTTCAACTAAGGA+TGG - chr1_2:19855062-19855081 Msa0061520:CDS 35.0%
TACATCATTCACACTTGAAG+TGG - chr1_2:19855091-19855110 Msa0061520:CDS 35.0%
TCCCAACTTGTAGTCATAAT+TGG + chr1_2:19855192-19855211 None:intergenic 35.0%
TTTCACCAAAAGAAGGGATT+CGG - chr1_2:19855286-19855305 Msa0061520:CDS 35.0%
TGTACAATGATGGTATGCAA+AGG - chr1_2:19855459-19855478 Msa0061520:CDS 35.0%
GTACAATGATGGTATGCAAA+GGG - chr1_2:19855460-19855479 Msa0061520:CDS 35.0%
!! TCTTGATTTGGACAAGCAAA+TGG + chr1_2:19855517-19855536 None:intergenic 35.0%
TTTGCTTGTCCAAATCAAGA+AGG - chr1_2:19855517-19855536 Msa0061520:five_prime_UTR 35.0%
GTATACTGGTGAAAGAAGTG+TGG - chr1_2:19851128-19851147 Msa0061520:CDS 40.0%
TGCAAATGCTGTTCGATTAC+GGG + chr1_2:19851181-19851200 None:intergenic 40.0%
TGACAAACTTCTGCTAGGTA+AGG + chr1_2:19851247-19851266 None:intergenic 40.0%
AATGGTGACAAACTTCTGCT+AGG + chr1_2:19851252-19851271 None:intergenic 40.0%
AGTTTGTCACCATTGCAGTA+CGG - chr1_2:19851258-19851277 Msa0061520:CDS 40.0%
AGATATTGTTCCAAGGCCAA+GGG - chr1_2:19851314-19851333 Msa0061520:CDS 40.0%
! ATCTGTTTTATGGAGAGAGG+AGG - chr1_2:19851401-19851420 Msa0061520:CDS 40.0%
TTGGGATTGGAATGAGAAAG+TGG - chr1_2:19851439-19851458 Msa0061520:CDS 40.0%
!! TACTTTGTAGTTTTACCCCG+TGG + chr1_2:19851546-19851565 None:intergenic 40.0%
GTTCTTGAGATCACTAAGCT+TGG + chr1_2:19851734-19851753 None:intergenic 40.0%
TCATATGTGATGTGCAGCAA+AGG + chr1_2:19851910-19851929 None:intergenic 40.0%
! TGTAGTTAATTGGTGCTCCT+CGG - chr1_2:19851956-19851975 Msa0061520:intron 40.0%
GAATAAAGCTCAAAAACCCG+AGG + chr1_2:19851976-19851995 None:intergenic 40.0%
! TTCACTCCATGCAGTTGTTT+TGG - chr1_2:19852090-19852109 Msa0061520:intron 40.0%
!! TCACTCCATGCAGTTGTTTT+GGG - chr1_2:19852091-19852110 Msa0061520:intron 40.0%
! GCAGAGATTTTCCGAATTTC+AGG - chr1_2:19852148-19852167 Msa0061520:CDS 40.0%
GGAAAACTTTGCTCATTACG+AGG - chr1_2:19852170-19852189 Msa0061520:CDS 40.0%
! ATCGCCTTTTTCTTGCAATC+TGG - chr1_2:19852224-19852243 Msa0061520:CDS 40.0%
! CGATTTGAGACATTGATCTC+TGG + chr1_2:19852597-19852616 None:intergenic 40.0%
TATATCAGTTCTTCCACCCA+CGG + chr1_2:19852724-19852743 None:intergenic 40.0%
GCTAAATATGCTGCTAGACT+TGG - chr1_2:19852930-19852949 Msa0061520:CDS 40.0%
! GCTAGACTTGGACAATCTTT+TGG - chr1_2:19852942-19852961 Msa0061520:CDS 40.0%
TTCCTCTACCGAAACTACAA+CGG - chr1_2:19852965-19852984 Msa0061520:CDS 40.0%
!!! ACATTTTTTAGCCACTCTCC+TGG + chr1_2:19853084-19853103 None:intergenic 40.0%
AGGAGAGTGGCTAAAAAATG+TGG - chr1_2:19853083-19853102 Msa0061520:CDS 40.0%
CGATTCAGACAACACAGATT+TGG - chr1_2:19853220-19853239 Msa0061520:CDS 40.0%
CTTATCCACTCTTGATGTCA+AGG - chr1_2:19853301-19853320 Msa0061520:CDS 40.0%
AATGTCCTTGACATCAAGAG+TGG + chr1_2:19853309-19853328 None:intergenic 40.0%
!! GTTTTGGACTTGATGTCTTC+CGG - chr1_2:19853404-19853423 Msa0061520:CDS 40.0%
! TTTTGGACTTGATGTCTTCC+GGG - chr1_2:19853405-19853424 Msa0061520:CDS 40.0%
CAGAATATTAGTGATCTCCC+CGG + chr1_2:19853426-19853445 None:intergenic 40.0%
CTGAAGGAGATGCTTATTTG+TGG - chr1_2:19853443-19853462 Msa0061520:CDS 40.0%
CAATGATGCTGCAGACATTT+AGG - chr1_2:19853495-19853514 Msa0061520:CDS 40.0%
! CCGCAATTCCAAAAGTTTTG+AGG + chr1_2:19853522-19853541 None:intergenic 40.0%
TGGAATTGCGGCAAAAAACT+AGG - chr1_2:19853531-19853550 Msa0061520:CDS 40.0%
TCCAAAAGGAAGAGCAATGA+TGG - chr1_2:19853562-19853581 Msa0061520:CDS 40.0%
CCAAAAGGAAGAGCAATGAT+GGG - chr1_2:19853563-19853582 Msa0061520:CDS 40.0%
TCAAAACACGAACATCACCT+GGG + chr1_2:19853715-19853734 None:intergenic 40.0%
TTCAAAACACGAACATCACC+TGG + chr1_2:19853716-19853735 None:intergenic 40.0%
!! AGGTGATGTTCGTGTTTTGA+AGG - chr1_2:19853715-19853734 Msa0061520:CDS 40.0%
! TTTTCCCTCAAAAAGGTCAC+AGG - chr1_2:19853780-19853799 Msa0061520:CDS 40.0%
! TCTACCTGTGACCTTTTTGA+GGG + chr1_2:19853787-19853806 None:intergenic 40.0%
! ATCTACCTGTGACCTTTTTG+AGG + chr1_2:19853788-19853807 None:intergenic 40.0%
ACATTCATTTGGATGTGGTC+TGG + chr1_2:19854251-19854270 None:intergenic 40.0%
CCACATCCAAATGAATGTTC+GGG - chr1_2:19854253-19854272 Msa0061520:CDS 40.0%
TCACTTCCCGAACATTCATT+TGG + chr1_2:19854262-19854281 None:intergenic 40.0%
! GGACATCTACTTTGTTTGCT+GGG - chr1_2:19854291-19854310 Msa0061520:CDS 40.0%
ATTGGATCAATTGTTCGAGG+TGG + chr1_2:19854331-19854350 None:intergenic 40.0%
ACCTCGAACAATTGATCCAA+TGG - chr1_2:19854330-19854349 Msa0061520:CDS 40.0%
TCCATTGGATCAATTGTTCG+AGG + chr1_2:19854334-19854353 None:intergenic 40.0%
TTGGCAGAATCATACTCCAT+TGG + chr1_2:19854349-19854368 None:intergenic 40.0%
CCCACAGATGTAAAGCTAAA+AGG + chr1_2:19854413-19854432 None:intergenic 40.0%
! TTTTCCCTCAGAAACCAAAG+GGG + chr1_2:19854618-19854637 None:intergenic 40.0%
! CTTTTCCCTCAGAAACCAAA+GGG + chr1_2:19854619-19854638 None:intergenic 40.0%
! CTTTGGTTTCTGAGGGAAAA+GGG - chr1_2:19854618-19854637 Msa0061520:intron 40.0%
GAAAAGGGATTGTGGTAATC+TGG - chr1_2:19854633-19854652 Msa0061520:intron 40.0%
TTCAGCTAGGATTCAAACTC+GGG - chr1_2:19854668-19854687 Msa0061520:intron 40.0%
AGGTTCTTTGTCTGCAAAGA+CGG + chr1_2:19854850-19854869 None:intergenic 40.0%
CAAAGAACCTGGAAAAGCAA+TGG - chr1_2:19854860-19854879 Msa0061520:intron 40.0%
AGCTTTGCAAGTTCAACACA+TGG + chr1_2:19854891-19854910 None:intergenic 40.0%
! GCAGTTGACTTTCCAAAAAC+CGG - chr1_2:19854921-19854940 Msa0061520:intron 40.0%
ATTCACACTTGAAGTGGCTA+AGG - chr1_2:19855097-19855116 Msa0061520:CDS 40.0%
! CTACAAGTTGGGAAATCTGA+TGG - chr1_2:19855199-19855218 Msa0061520:CDS 40.0%
!! GGAAATCTGATGGACTACTA+TGG - chr1_2:19855209-19855228 Msa0061520:CDS 40.0%
ATGCGATTACTATGGCTGTA+AGG - chr1_2:19855309-19855328 Msa0061520:CDS 40.0%
CTTATGCAAAAGCTTCTGCT+TGG - chr1_2:19855402-19855421 Msa0061520:CDS 40.0%
! ACCATTTTCTCAGCTTTCCA+TGG - chr1_2:19855483-19855502 Msa0061520:exon 40.0%
ACCATGGAAAGCTGAGAAAA+TGG + chr1_2:19855487-19855506 None:intergenic 40.0%
AGCAAATGGTAAACACACCA+TGG + chr1_2:19855503-19855522 None:intergenic 40.0%
TGGCTTTCTCCTTCTTGATT+TGG + chr1_2:19855529-19855548 None:intergenic 40.0%
AAATCAAGAAGGAGAAAGCC+AGG - chr1_2:19855528-19855547 Msa0061520:five_prime_UTR 40.0%
GTTTGTCACCATTGCAGTAC+GGG - chr1_2:19851259-19851278 Msa0061520:CDS 45.0%
GAGATATTGTTCCAAGGCCA+AGG - chr1_2:19851313-19851332 Msa0061520:CDS 45.0%
TGCAAAAATTCCCTTGGCCT+TGG + chr1_2:19851327-19851346 None:intergenic 45.0%
! GTAGTTAATTGGTGCTCCTC+GGG - chr1_2:19851957-19851976 Msa0061520:intron 45.0%
TACGGATCCATTGGTCATCA+GGG + chr1_2:19852062-19852081 None:intergenic 45.0%
TTCGGAAAATCTCTGCTGCT+AGG + chr1_2:19852144-19852163 None:intergenic 45.0%
TGCTCATTACGAGGAAAGTG+CGG - chr1_2:19852179-19852198 Msa0061520:CDS 45.0%
GATCCACTCTCCAATGTGTA+TGG + chr1_2:19852207-19852226 None:intergenic 45.0%
ATTCCTTGAGGAGCAACCAT+GGG + chr1_2:19852258-19852277 None:intergenic 45.0%
AATTCCTTGAGGAGCAACCA+TGG + chr1_2:19852259-19852278 None:intergenic 45.0%
TCTGTTATGAACCCGTGAGA+TGG - chr1_2:19852442-19852461 Msa0061520:intron 45.0%
TGATCTTTCAGCCATCTCAC+GGG + chr1_2:19852456-19852475 None:intergenic 45.0%
CTGATCTTTCAGCCATCTCA+CGG + chr1_2:19852457-19852476 None:intergenic 45.0%
AAAGATATAGTCGGTGACCG+AGG + chr1_2:19852510-19852529 None:intergenic 45.0%
! TCGGTCACCGACTATATCTT+TGG - chr1_2:19852509-19852528 Msa0061520:intron 45.0%
!! ACGGTTTGGTATATGTTCGC+AGG - chr1_2:19852535-19852554 Msa0061520:intron 45.0%
!! CGGTTTGGTATATGTTCGCA+GGG - chr1_2:19852536-19852555 Msa0061520:intron 45.0%
! ACGTGTTTCGTTTGTTGACG+AGG - chr1_2:19852656-19852675 Msa0061520:intron 45.0%
! TTCGTTTGTTGACGAGGAGT+TGG - chr1_2:19852662-19852681 Msa0061520:intron 45.0%
AGTTGCGTGAAAGTTCGCTA+TGG - chr1_2:19852826-19852845 Msa0061520:CDS 45.0%
ATGTTTGCTCGTACACCAAC+TGG - chr1_2:19852849-19852868 Msa0061520:CDS 45.0%
AGATACCGCTGGATCCATAA+GGG - chr1_2:19852872-19852891 Msa0061520:CDS 45.0%
TGGATCCATAAGGGAATGGA+TGG - chr1_2:19852881-19852900 Msa0061520:CDS 45.0%
GGATCCATAAGGGAATGGAT+GGG - chr1_2:19852882-19852901 Msa0061520:CDS 45.0%
ATCTCCCATCCATTCCCTTA+TGG + chr1_2:19852889-19852908 None:intergenic 45.0%
TTTGGACTTGATGTCTTCCG+GGG - chr1_2:19853406-19853425 Msa0061520:CDS 45.0%
! CCCATCATTGCTCTTCCTTT+TGG + chr1_2:19853566-19853585 None:intergenic 45.0%
!!! TGTTCGTGTTTTGAAGGCTG+TGG - chr1_2:19853721-19853740 Msa0061520:CDS 45.0%
CCCGAACATTCATTTGGATG+TGG + chr1_2:19854256-19854275 None:intergenic 45.0%
TGTTCGGGAAGTGATCTTGA+TGG - chr1_2:19854268-19854287 Msa0061520:CDS 45.0%
GTTCGGGAAGTGATCTTGAT+GGG - chr1_2:19854269-19854288 Msa0061520:CDS 45.0%
TTCGGGAAGTGATCTTGATG+GGG - chr1_2:19854270-19854289 Msa0061520:CDS 45.0%
! GGGACATCTACTTTGTTTGC+TGG - chr1_2:19854290-19854309 Msa0061520:CDS 45.0%
GGATCATGATGTGGAGATTG+AGG - chr1_2:19854381-19854400 Msa0061520:CDS 45.0%
AAAGACTCAAGCAAGCCACA+TGG - chr1_2:19854572-19854591 Msa0061520:intron 45.0%
! TATCACCCCTTTGGTTTCTG+AGG - chr1_2:19854610-19854629 Msa0061520:intron 45.0%
! ATCACCCCTTTGGTTTCTGA+GGG - chr1_2:19854611-19854630 Msa0061520:intron 45.0%
! CCTTTTCCCTCAGAAACCAA+AGG + chr1_2:19854620-19854639 None:intergenic 45.0%
! CCTTTGGTTTCTGAGGGAAA+AGG - chr1_2:19854617-19854636 Msa0061520:intron 45.0%
! TTCTGAGGGAAAAGGGATTG+TGG - chr1_2:19854625-19854644 Msa0061520:intron 45.0%
GTCTTTGCAGACAAAGAACC+TGG - chr1_2:19854849-19854868 Msa0061520:intron 45.0%
! AGGTATTTCTGCTGGGATAC+CGG + chr1_2:19854943-19854962 None:intergenic 45.0%
GATCCAGACATGGAATTCGA+CGG - chr1_2:19855128-19855147 Msa0061520:CDS 45.0%
CATGGAATTCGACGGCTTTA+TGG - chr1_2:19855136-19855155 Msa0061520:CDS 45.0%
ACCGAAGCAGAAATCCTAAG+TGG - chr1_2:19855239-19855258 Msa0061520:CDS 45.0%
CCCACTTAGGATTTCTGCTT+CGG + chr1_2:19855243-19855262 None:intergenic 45.0%
CCGAAGCAGAAATCCTAAGT+GGG - chr1_2:19855240-19855259 Msa0061520:CDS 45.0%
GGATTCGGATGCGATTACTA+TGG - chr1_2:19855301-19855320 Msa0061520:CDS 45.0%
TGTAAGGTCCCTAAGGAAAG+AGG - chr1_2:19855325-19855344 Msa0061520:CDS 45.0%
TGGAACAAAGTTTCAGTCGC+AGG - chr1_2:19855570-19855589 Msa0061520:five_prime_UTR 45.0%
CAGGCACGGTCACATAATGA+GGG + chr1_2:19851086-19851105 None:intergenic 50.0%
TCAGGCACGGTCACATAATG+AGG + chr1_2:19851087-19851106 None:intergenic 50.0%
AGATTGAGCTGCATCAGCCA+CGG - chr1_2:19851526-19851545 Msa0061520:CDS 50.0%
TTGATCCCCCTGATGACCAA+TGG - chr1_2:19852052-19852071 Msa0061520:intron 50.0%
ACGGATCCATTGGTCATCAG+GGG + chr1_2:19852061-19852080 None:intergenic 50.0%
GTACGGATCCATTGGTCATC+AGG + chr1_2:19852063-19852082 None:intergenic 50.0%
GACTGCCCAAAACAACTGCA+TGG + chr1_2:19852099-19852118 None:intergenic 50.0%
! GCTCATTACGAGGAAAGTGC+GGG - chr1_2:19852180-19852199 Msa0061520:CDS 50.0%
AAGTGCGGGTCCATACACAT+TGG - chr1_2:19852194-19852213 Msa0061520:CDS 50.0%
GGTCCATACACATTGGAGAG+TGG - chr1_2:19852201-19852220 Msa0061520:CDS 50.0%
CAATCTGGATGTTGTCCCCA+TGG - chr1_2:19852239-19852258 Msa0061520:CDS 50.0%
TTCCTTGAGGAGCAACCATG+GGG + chr1_2:19852257-19852276 None:intergenic 50.0%
TCTTCACGTATTTCCGTGGG+TGG - chr1_2:19852708-19852727 Msa0061520:intron 50.0%
GAGATACCGCTGGATCCATA+AGG - chr1_2:19852871-19852890 Msa0061520:CDS 50.0%
CCATTCCCTTATGGATCCAG+CGG + chr1_2:19852880-19852899 None:intergenic 50.0%
GACCGTTGTAGTTTCGGTAG+AGG + chr1_2:19852970-19852989 None:intergenic 50.0%
GCTGCTGACCGTTGTAGTTT+CGG + chr1_2:19852976-19852995 None:intergenic 50.0%
TCTTGAACTTGCCAGGAGAG+TGG - chr1_2:19853070-19853089 Msa0061520:CDS 50.0%
GGCTGTTGATCCAACCTCAT+CGG - chr1_2:19853163-19853182 Msa0061520:CDS 50.0%
GACAACTTCACCGATGAGGT+TGG + chr1_2:19853176-19853195 None:intergenic 50.0%
CAGTGACAACTTCACCGATG+AGG + chr1_2:19853180-19853199 None:intergenic 50.0%
CATCGGTGAAGTTGTCACTG+AGG - chr1_2:19853180-19853199 Msa0061520:CDS 50.0%
! AGATTCGACAAAGGCACACG+AGG - chr1_2:19853382-19853401 Msa0061520:CDS 50.0%
!! GACAAAGGCACACGAGGTTT+TGG - chr1_2:19853388-19853407 Msa0061520:CDS 50.0%
TGCAAAGACGGTGTGTGCAT+TGG + chr1_2:19854838-19854857 None:intergenic 50.0%
GAACCTGGAAAAGCAATGGC+AGG - chr1_2:19854864-19854883 Msa0061520:intron 50.0%
!!! TCTGCTGGGATACCGGTTTT+TGG + chr1_2:19854936-19854955 None:intergenic 50.0%
! GACGACGAGGTATTTCTGCT+GGG + chr1_2:19854950-19854969 None:intergenic 50.0%
! AGACGACGAGGTATTTCTGC+TGG + chr1_2:19854951-19854970 None:intergenic 50.0%
GGAGTCGTATGATCCAGACA+TGG - chr1_2:19855118-19855137 Msa0061520:CDS 50.0%
AAGCCGTCGAATTCCATGTC+TGG + chr1_2:19855134-19855153 None:intergenic 50.0%
! CGCATCCGAATCCCTTCTTT+TGG + chr1_2:19855294-19855313 None:intergenic 50.0%
CTATGGCTGTAAGGTCCCTA+AGG - chr1_2:19855318-19855337 Msa0061520:CDS 50.0%
ACTCCTCGCCTCTTTCCTTA+GGG + chr1_2:19855336-19855355 None:intergenic 50.0%
AACTCCTCGCCTCTTTCCTT+AGG + chr1_2:19855337-19855356 None:intergenic 50.0%
TAAGGAAAGAGGCGAGGAGT+TGG - chr1_2:19855336-19855355 Msa0061520:CDS 50.0%
! GCGAGGAGTTGGTTCAATGA+CGG - chr1_2:19855347-19855366 Msa0061520:CDS 50.0%
! AGGAGTTGGTTCAATGACGG+CGG - chr1_2:19855350-19855369 Msa0061520:CDS 50.0%
AGAAGGAGAAAGCCAGGATG+AGG - chr1_2:19855534-19855553 Msa0061520:five_prime_UTR 50.0%
GATGAGGATGCATTCGAGCA+TGG - chr1_2:19855550-19855569 Msa0061520:five_prime_UTR 50.0%
TAGGAGCTCCCGTACTGCAA+TGG + chr1_2:19851270-19851289 None:intergenic 55.0%
GATTGAGCTGCATCAGCCAC+GGG - chr1_2:19851527-19851546 Msa0061520:CDS 55.0%
ATTGAGCTGCATCAGCCACG+GGG - chr1_2:19851528-19851547 Msa0061520:CDS 55.0%
CGGATCCATTGGTCATCAGG+GGG + chr1_2:19852060-19852079 None:intergenic 55.0%
GTTCAGCACGGGTGTCTTTC+AGG - chr1_2:19852318-19852337 Msa0061520:intron 55.0%
GATATAGTCGGTGACCGAGG+TGG + chr1_2:19852507-19852526 None:intergenic 55.0%
ACACCAACTGGAGATACCGC+TGG - chr1_2:19852861-19852880 Msa0061520:CDS 55.0%
GATCCAGCGGTATCTCCAGT+TGG + chr1_2:19852867-19852886 None:intergenic 55.0%
CCGCTGGATCCATAAGGGAA+TGG - chr1_2:19852877-19852896 Msa0061520:CDS 55.0%
TTCTATGCCGTCTGCCTTCC+AGG - chr1_2:19853112-19853131 Msa0061520:CDS 55.0%
TACCGAACCTGGAAGGCAGA+CGG + chr1_2:19853122-19853141 None:intergenic 55.0%
! TCTGCCTTCCAGGTTCGGTA+TGG - chr1_2:19853122-19853141 Msa0061520:CDS 55.0%
!! GTTCGGTATGGCGGGTACAA+AGG - chr1_2:19853134-19853153 Msa0061520:CDS 55.0%
! TGGCGGGTACAAAGGAGTTG+TGG - chr1_2:19853142-19853161 Msa0061520:CDS 55.0%
AAAAACCCGTGCTTGCACCC+AGG - chr1_2:19853695-19853714 Msa0061520:CDS 55.0%
ACATCACCTGGGTGCAAGCA+CGG + chr1_2:19853704-19853723 None:intergenic 55.0%
TGTGCCAGCTTTGCGCCATA+TGG - chr1_2:19853745-19853764 Msa0061520:CDS 55.0%
TCCACCATATGGCGCAAAGC+TGG + chr1_2:19853752-19853771 None:intergenic 55.0%
!! GGACCTGCCATTGCTTTTCC+AGG + chr1_2:19854870-19854889 None:intergenic 55.0%
TCTGTGGGGATAAGACGACG+AGG + chr1_2:19854963-19854982 None:intergenic 55.0%
! GGAGTTGGTTCAATGACGGC+GGG - chr1_2:19855351-19855370 Msa0061520:CDS 55.0%
! GAGTTGGTTCAATGACGGCG+GGG - chr1_2:19855352-19855371 Msa0061520:CDS 55.0%
GCTCGAATGCATCCTCATCC+TGG + chr1_2:19855549-19855568 None:intergenic 55.0%
GTCCCCATGGTTGCTCCTCA+AGG - chr1_2:19852252-19852271 Msa0061520:CDS 60.0%
TGCCGTCTGCCTTCCAGGTT+CGG - chr1_2:19853117-19853136 Msa0061520:CDS 60.0%
! GCCTTCCAGGTTCGGTATGG+CGG - chr1_2:19853125-19853144 Msa0061520:CDS 60.0%
! CCTTCCAGGTTCGGTATGGC+GGG - chr1_2:19853126-19853145 Msa0061520:CDS 60.0%
TGTACCCGCCATACCGAACC+TGG + chr1_2:19853133-19853152 None:intergenic 60.0%
CATCACCTGGGTGCAAGCAC+GGG + chr1_2:19853703-19853722 None:intergenic 60.0%
GCCAGCTTTGCGCCATATGG+TGG - chr1_2:19853748-19853767 Msa0061520:CDS 60.0%
GGTCCCTAAGGAAAGAGGCG+AGG - chr1_2:19855330-19855349 Msa0061520:CDS 60.0%
GCGGGGCTGATGTAGATGCT+GGG - chr1_2:19855369-19855388 Msa0061520:CDS 60.0%
CCCGCCATACCGAACCTGGA+AGG + chr1_2:19853129-19853148 None:intergenic 65.0%
GGCGGGGCTGATGTAGATGC+TGG - chr1_2:19855368-19855387 Msa0061520:CDS 65.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 19850937 19855607 19850937 ID=Msa0061520;Name=Msa0061520
chr1_2 mRNA 19850937 19855607 19850937 ID=Msa0061520-mRNA-1;Parent=Msa0061520;Name=Msa0061520-mRNA-1;_AED=0.41;_eAED=0.41;_QI=111|0.33|0.25|0.5|1|1|4|0|1116
chr1_2 exon 19850937 19851764 19850937 ID=Msa0061520-mRNA-1:exon:7615;Parent=Msa0061520-mRNA-1
chr1_2 exon 19852142 19852292 19852142 ID=Msa0061520-mRNA-1:exon:7614;Parent=Msa0061520-mRNA-1
chr1_2 exon 19852743 19854583 19852743 ID=Msa0061520-mRNA-1:exon:7613;Parent=Msa0061520-mRNA-1
chr1_2 exon 19854966 19855607 19854966 ID=Msa0061520-mRNA-1:exon:7612;Parent=Msa0061520-mRNA-1
chr1_2 five_prime_UTR 19855497 19855607 19855497 ID=Msa0061520-mRNA-1:five_prime_utr;Parent=Msa0061520-mRNA-1
chr1_2 CDS 19854966 19855496 19854966 ID=Msa0061520-mRNA-1:cds;Parent=Msa0061520-mRNA-1
chr1_2 CDS 19852743 19854583 19852743 ID=Msa0061520-mRNA-1:cds;Parent=Msa0061520-mRNA-1
chr1_2 CDS 19852142 19852292 19852142 ID=Msa0061520-mRNA-1:cds;Parent=Msa0061520-mRNA-1
chr1_2 CDS 19850937 19851764 19850937 ID=Msa0061520-mRNA-1:cds;Parent=Msa0061520-mRNA-1
Gene Sequence

>Msa0061520

ATGGTTAAAAGTAAAACAGTTGAGCTGTATGGATTCCCTCATTATGTGACCGTGCCTGATGTAAAGAGATTTGTAGAGCAGTATACTGGTGAAAGAAGTGTGGTTGCTATAAAGATAAGAGAAGGCAAAGCCCGTAATCGAACAGCATTTGCAATTATTCAATTCACTACTAAAGATCATGCTACAGATATGATGGCCTTACCTAGCAGAAGTTTGTCACCATTGCAGTACGGGAGCTCCTATTTAAAAGTTCGGGAAATGGAAAGAGATATTGTTCCAAGGCCAAGGGAATTTTTGCACAGTTTGGATGATGTGAAACTGTATTTTGGCTGTCAAATCTCAAAGAAAAGATTATCTGTTTTATGGAGAGAGGAGGATGTTAGAGTTGATTTTGGGATTGGAATGAGAAAGTGGCGATTCTCTTTGTGCCATGACAATAAGACATTCAAACTTGAGCTTTCATATGAGAATATTTGGAAGATTGAGCTGCATCAGCCACGGGGTAAAACTACAAAGTATCTATTGATTCAGTTAATTGGTGCTCCTCGGGTTTTTGAGCTTTATTCTCCTACTTCAGATGATGCATATAACATATACGAAGATCCTTTTAAGAACTATTTTATTGATCCCCCTGATGACCAATGGATCCGTACAATAGATTTCACTCCATGCAGTTGTTTTGGGCAGTCTTCTGCTTTATGTTTAGAGCTTCCTAGCAGCAGAGATTTTCCGAATTTCAGGGAAAACTTTGCTCATTACGAGGAAAGTGCGGGTCCATACACATTGGAGAGTGGATCGCCTTTTTCTTGCAATCTGGATGTTGTCCCCATGGTTGCTCCTCAAGGAATTCAAATTCCATTTGACATCTTGTTTAAAGTTAATTCATTGGTTCAGCACGGGTGTCTTTCAGGTTCTGAACTCGATAATGCTTTCTATCATCTAGTTGATCCAACTAGAAAGAATGTTGAGCTTATTGAGAATGCTTTAGAAAAGATGTACTATTCAAAGGATTTCTGTTATGAACCCGTGAGATGGCTGAAAGATCAGTACGAAATGTACCGTAGTTCAAATAATCCACCTCGGTCACCGACTATATCTTTGGATAACGGTTTGGTATATGTTCGCAGGGCACAGATAACACCTTGCAAAGTATACTTTTGTGGTCCAGAGATCAATGTCTCAAATCGTGTTCTGCGTAAATACAAAAAATATATGGATAACTTTCTACGTGTTTCGTTTGTTGACGAGGAGTTGGATAAACTGTATTCATCAGATTTATCTTCACGTATTTCCGTGGGTGGAAGAACTGATATATACTATAGAATTCTTTCCATCCTTAGAAATGGCATAGTTATTGGTGATAAGAAGTTTGAATTTCTAGCTTTCTCATCAAGTCAGTTGCGTGAAAGTTCGCTATGGATGTTTGCTCGTACACCAACTGGAGATACCGCTGGATCCATAAGGGAATGGATGGGAGATTTTAGCCGCATAAAAAATGTAGCTAAATATGCTGCTAGACTTGGACAATCTTTTGGTTCCTCTACCGAAACTACAACGGTCAGCAGCACTGAAATTGAAATTATTCTTGATGTACATAATAAAACCAAATATGTCTTCTCTGATGGAATTGGGAAAATATCTCTTGAACTTGCCAGGAGAGTGGCTAAAAAATGTGGTTATGATTCTATGCCGTCTGCCTTCCAGGTTCGGTATGGCGGGTACAAAGGAGTTGTGGCTGTTGATCCAACCTCATCGGTGAAGTTGTCACTGAGGATGAGCATGCTCAAGTACGATTCAGACAACACAGATTTGGATGTTTTGGCATGTAGTAAGTTTCGGCCTTGTTATCTGAATCGACAGTTGATTACTCTCTTATCCACTCTTGATGTCAAGGACATTGTTTTCGAGAAAAAACAAAAAGAAGCTGTTGATCAACTGAACACAATACTAACAGATTCGACAAAGGCACACGAGGTTTTGGACTTGATGTCTTCCGGGGAGATCACTAATATTCTGAAGGAGATGCTTATTTGTGGTTACAAGCCTAATGTTGAACCATTTCTTTCAATGATGCTGCAGACATTTAGGGCCTCAAAACTTTTGGAATTGCGGCAAAAAACTAGGATATTTATTCCAAAAGGAAGAGCAATGATGGGAGTTCTAGATGAAACTAGAACCCTAGAATATGGTGAAGTTTTTGTTCAATATTCTAACAATAGGGAAGACAGTCTTTCTCATGTAGTTAATGGTAAGGTTGTTGTAGCGAAAAACCCGTGCTTGCACCCAGGTGATGTTCGTGTTTTGAAGGCTGTGGATGTGCCAGCTTTGCGCCATATGGTGGATTGTGTTGTTTTCCCTCAAAAAGGTCACAGACCACATCCAAATGAATGTTCGGGAAGTGATCTTGATGGGGACATCTACTTTGTTTGCTGGGATTCTGAATTGATTCCACCTCGAACAATTGATCCAATGGAGTATGATTCTGCCAAACCTATTGTATTGGATCATGATGTGGAGATTGAGGAAGTGCAGAAGTATTTTACCAATTACATACTCAACGATTGTCTTGGAATAATTGCCAATGCACACACCGTCTTTGCAGACAAAGAACCTGGAAAAGCAATGGCAGGTCCATGTGTTGAACTTGCAAAGCTGTTCTCAACAGCAGTTGACTTTCCAAAAACCGGTATCCCAGCAGAAATACCTCGTCGTCTTATCCCCACAGAATATCCAGATTTCATGGAAAAGCATAACAAACCTATCTACAAATCAAAGAATGTAATAGGAAAACTTTTTAGGGAAATTCAAGGTATTTCAACTAAGGATGGTTCTATTACATCATTCACACTTGAAGTGGCTAAGGAGTCGTATGATCCAGACATGGAATTCGACGGCTTTATGGATTATGTTGATGATGCATTCTATCACAAAACCAATTATGACTACAAGTTGGGAAATCTGATGGACTACTATGGTATCAAAACCGAAGCAGAAATCCTAAGTGGGAATATTATGAAAATGTCAAAATCTTTCACCAAAAGAAGGGATTCGGATGCGATTACTATGGCTGTAAGGTCCCTAAGGAAAGAGGCGAGGAGTTGGTTCAATGACGGCGGGGCTGATGTAGATGCTGGGAGTGATGATGCTTATGCAAAAGCTTCTGCTTGGTACTATGTTACTTACCATCATAGTTACTATGGTTTGTACAATGATGGTATGCAAAGGGACCATTTTCTCAGCTTTCCATGGTGTGTTTACCATTTGCTTGTCCAAATCAAGAAGGAGAAAGCCAGGATGAGGATGCATTCGAGCATGGAACAAAGTTTCAGTCGCAGGTTGCGTCTTGACTGA
Protein sequence

>Msa0061520

MVKSKTVELYGFPHYVTVPDVKRFVEQYTGERSVVAIKIREGKARNRTAFAIIQFTTKDHATDMMALPSRSLSPLQYGSSYLKVREMERDIVPRPREFLHSLDDVKLYFGCQISKKRLSVLWREEDVRVDFGIGMRKWRFSLCHDNKTFKLELSYENIWKIELHQPRGKTTKYLLIQLIGAPRVFELYSPTSDDAYNIYEDPFKNYFIDPPDDQWIRTIDFTPCSCFGQSSALCLELPSSRDFPNFRENFAHYEESAGPYTLESGSPFSCNLDVVPMVAPQGIQIPFDILFKVNSLVQHGCLSGSELDNAFYHLVDPTRKNVELIENALEKMYYSKDFCYEPVRWLKDQYEMYRSSNNPPRSPTISLDNGLVYVRRAQITPCKVYFCGPEINVSNRVLRKYKKYMDNFLRVSFVDEELDKLYSSDLSSRISVGGRTDIYYRILSILRNGIVIGDKKFEFLAFSSSQLRESSLWMFARTPTGDTAGSIREWMGDFSRIKNVAKYAARLGQSFGSSTETTTVSSTEIEIILDVHNKTKYVFSDGIGKISLELARRVAKKCGYDSMPSAFQVRYGGYKGVVAVDPTSSVKLSLRMSMLKYDSDNTDLDVLACSKFRPCYLNRQLITLLSTLDVKDIVFEKKQKEAVDQLNTILTDSTKAHEVLDLMSSGEITNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETRTLEYGEVFVQYSNNREDSLSHVVNGKVVVAKNPCLHPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPPRTIDPMEYDSAKPIVLDHDVEIEEVQKYFTNYILNDCLGIIANAHTVFADKEPGKAMAGPCVELAKLFSTAVDFPKTGIPAEIPRRLIPTEYPDFMEKHNKPIYKSKNVIGKLFREIQGISTKDGSITSFTLEVAKESYDPDMEFDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTEAEILSGNIMKMSKSFTKRRDSDAITMAVRSLRKEARSWFNDGGADVDAGSDDAYAKASAWYYVTYHHSYYGLYNDGMQRDHFLSFPWCVYHLLVQIKKEKARMRMHSSMEQSFSRRLRLD*