AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0012520

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012520 MtrunA17_Chr1g0161471 94.360 1117 59 1 34 1146 1 1117 0.0 2166
Msa0012520 MtrunA17_Chr1g0161491 82.804 1134 182 5 20 1146 1 1128 0.0 1920
Msa0012520 MtrunA17_Chr1g0161521 82.143 1120 190 3 34 1146 1 1117 0.0 1864
Msa0012520 MtrunA17_Chr1g0161511 81.996 1122 189 4 34 1146 1 1118 0.0 1857
Msa0012520 MtrunA17_Chr1g0161451 54.626 1124 462 10 38 1132 3 1107 0.0 1225
Msa0012520 MtrunA17_Chr4g0059271 39.119 1135 626 20 36 1127 7 1119 0.0 769
Msa0012520 MtrunA17_Chr3g0137841 36.540 1133 618 28 84 1137 81 1191 0.0 602
Msa0012520 MtrunA17_Chr4g0059261 55.294 85 38 0 885 969 1 85 1.64e-23 97.8
Msa0012520 MtrunA17_Chr6g0486821 21.865 654 372 27 532 1094 322 927 4.34e-14 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0012520 AT1G14790.1 61.470 1116 412 9 37 1145 2 1106 0.0 1377
Msa0012520 AT4G11130.1 38.489 1138 623 22 39 1128 11 1119 0.0 747
Msa0012520 AT3G49500.3 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0012520 AT3G49500.4 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0012520 AT3G49500.1 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0012520 AT3G49500.2 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0012520 AT3G49500.5 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0012520 AT2G19930.3 24.963 677 383 27 399 981 195 840 5.72e-29 125
Msa0012520 AT2G19930.2 24.963 677 383 27 399 981 201 846 6.34e-29 125
Msa0012520 AT2G19930.1 25.197 635 352 25 440 981 242 846 5.69e-28 122
Msa0012520 AT2G19910.2 25.209 599 324 23 470 969 265 838 2.15e-23 108
Msa0012520 AT2G19910.1 24.836 608 324 23 470 969 265 847 8.49e-22 102

Find 247 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCTCTTGAACAAATTTA+AGG 0.056328 1_1:-18751362 None:intergenic
CATGGAATTCGACGGCTTTA+TGG 0.117089 1_1:+18755630 Msa0012520:CDS
CAATGATGCTGCAGACATTT+AGG 0.140329 1_1:+18754022 Msa0012520:CDS
GAGAATGTTAGAGTTGATTT+TGG 0.153035 1_1:+18751944 Msa0012520:CDS
TTTCTTCTCCTATCCTATTT+AGG 0.157937 1_1:+18751524 Msa0012520:CDS
CTCTTCTGTTTGTAGTTAAT+TGG 0.176066 1_1:+18752470 Msa0012520:intron
CCCATCATTGCTCTTCCTTT+TGG 0.190630 1_1:-18754090 None:intergenic
AGCTTTCATACGAGAATATT+TGG 0.203408 1_1:+18752026 Msa0012520:CDS
GTTCAGCACGGGTGTCTTTC+AGG 0.203501 1_1:+18752845 Msa0012520:CDS
CAACACAGATTTGGATGTTT+TGG 0.216117 1_1:+18753756 Msa0012520:CDS
CTTAGAAATGGCATAGTTAT+TGG 0.221122 1_1:+18753292 Msa0012520:CDS
AGTCTTTCTCATGTAGTTAA+TGG 0.233808 1_1:+18754183 Msa0012520:CDS
GATGAGGTGAAACTGTATTT+TGG 0.246324 1_1:+18751878 Msa0012520:CDS
GAAAGAAATGGTTCAACATT+AGG 0.258974 1_1:-18754000 None:intergenic
TCCATCAGAGAAGACATATT+TGG 0.262792 1_1:-18753560 None:intergenic
TGCATCTGCATCCCTTCTTT+TGG 0.269470 1_1:-18755785 None:intergenic
GGGACATCTACTTTGTTTGC+TGG 0.273457 1_1:+18754815 Msa0012520:CDS
GCTAGACTTGGACAATCTTT+TGG 0.274423 1_1:+18753469 Msa0012520:CDS
AATGATGCTGCAGACATTTA+GGG 0.280438 1_1:+18754023 Msa0012520:CDS
TCAATAAAATAGTTCTTAAA+AGG 0.281207 1_1:-18752557 None:intergenic
GGGCTTTCTCCTTCTTGATT+TGG 0.287942 1_1:-18756008 None:intergenic
TACAAAGTATCTATTGATTC+AGG 0.289065 1_1:+18752081 Msa0012520:CDS
TTGTTCAATATTCTAACAAT+AGG 0.290114 1_1:+18754154 Msa0012520:CDS
ATTTAGGGCCTCAAAACTTT+TGG 0.299042 1_1:+18754038 Msa0012520:CDS
TATGTCTTCTCTGATGGAAT+TGG 0.304418 1_1:+18753565 Msa0012520:CDS
ATCTCCCATCCATTCCCTTA+TGG 0.306555 1_1:-18753413 None:intergenic
GACGAAGGCACGCGAGGTTT+TGG 0.310522 1_1:+18753915 Msa0012520:CDS
ACAATCGTTGAGTATGTAAT+TGG 0.310788 1_1:-18755293 None:intergenic
ACATTCTTTGATTTGTAGAT+AGG 0.317451 1_1:-18755508 None:intergenic
TTCACTCCATGCACTTGTAT+TGG 0.328856 1_1:+18752614 Msa0012520:CDS
CGATTCAGACAACACAGATT+TGG 0.332074 1_1:+18753747 Msa0012520:CDS
TCGGTCACTGACTATATCTT+TGG 0.333336 1_1:+18753036 Msa0012520:CDS
GAATTCCATGTCGGAATCAT+AGG 0.337332 1_1:-18755617 None:intergenic
ACTTACCATCATAGTTACTA+TGG 0.338715 1_1:+18755916 Msa0012520:CDS
TGCTCGAATGCATCCTCATC+CGG 0.342460 1_1:-18756029 None:intergenic
ACGGTTTGGTATATGTTTGC+AGG 0.343120 1_1:+18753062 Msa0012520:CDS
AGTAAAACAATTGAGTTGTA+TGG 0.346819 1_1:+18751581 Msa0012520:CDS
TCACTCCATGCACTTGTATT+GGG 0.348220 1_1:+18752615 Msa0012520:CDS
GAAACTAGAACCCTAGAATA+TGG 0.354957 1_1:+18754123 Msa0012520:CDS
TACAAATCAAAGAATGTAAT+AGG 0.356384 1_1:+18755514 Msa0012520:CDS
TGTACCCGCCATACCGAATC+TGG 0.356571 1_1:-18753657 None:intergenic
GCTTATGAACTTTCACTACT+TGG 0.362200 1_1:+18751394 Msa0012520:five_prime_UTR
TGGTTCAATGAAGACGATAC+TGG 0.362216 1_1:+18755850 Msa0012520:CDS
TCTCTCTTGAACAAATTTAA+GGG 0.362945 1_1:-18751361 None:intergenic
AGCTCAACATTCTTTCTAGT+TGG 0.365437 1_1:-18752905 None:intergenic
GCTGCTGACCGTTGTAGTTT+CGG 0.366080 1_1:-18753500 None:intergenic
TCACTTCCCGAACATTCATT+TGG 0.366423 1_1:-18754784 None:intergenic
CTATTTAAAAGTTCGGGAAA+TGG 0.367680 1_1:+18751811 Msa0012520:CDS
GATTTGTAGATAGGTTTGTT+AGG 0.370243 1_1:-18755499 None:intergenic
GTACGGATCCATTGGTCATC+AGG 0.373811 1_1:-18752584 None:intergenic
AACTCCTTGCTTCTTTCCTT+AGG 0.379530 1_1:-18755828 None:intergenic
CAATAACTATGCCATTTCTA+AGG 0.379543 1_1:-18753291 None:intergenic
TTCTGCCAAACCTATTGTAT+TGG 0.383278 1_1:+18754885 Msa0012520:CDS
ACATCCGGATTGCAAGAAAA+AGG 0.385101 1_1:-18752752 None:intergenic
ACTCCTTGCTTCTTTCCTTA+GGG 0.387620 1_1:-18755827 None:intergenic
CTTGTTTAAAGTTAATTCAT+TGG 0.391465 1_1:+18752823 Msa0012520:CDS
GGAGCTCCTATTTAAAAGTT+CGG 0.391789 1_1:+18751804 Msa0012520:CDS
TGCCGTCTGCCTTCCAGATT+CGG 0.392143 1_1:+18753644 Msa0012520:CDS
ACCACATCCAAATGAATGTT+CGG 0.396067 1_1:+18754777 Msa0012520:CDS
TATATCTTTGGATAACGGTT+TGG 0.398083 1_1:+18753048 Msa0012520:CDS
ATTCTTTCCATCCTTAGAAA+TGG 0.402135 1_1:+18753280 Msa0012520:CDS
CACAGAATATCCAGATTTCA+TGG 0.402831 1_1:+18755471 Msa0012520:CDS
TAGCAAATGCTGTTCGAATA+CGG 0.406629 1_1:-18751703 None:intergenic
GAGCTCCTATTTAAAAGTTC+GGG 0.414378 1_1:+18751805 Msa0012520:CDS
TGTAGTTAATTGGTGCTCCT+CGG 0.416981 1_1:+18752480 Msa0012520:intron
TGAACTTTCACTACTTGGAT+TGG 0.422322 1_1:+18751399 Msa0012520:five_prime_UTR
TGTTCAATATTCTAACAATA+GGG 0.424933 1_1:+18754155 Msa0012520:CDS
CTGATCTTTCAGCCATTTCA+CGG 0.430314 1_1:-18752981 None:intergenic
ACCATGGAAAGCTTAGAAAA+TGG 0.431302 1_1:-18755966 None:intergenic
ACATCATGATCCAATACAAT+AGG 0.434504 1_1:-18754895 None:intergenic
CTGAAAGAGATGCTTATTTG+TGG 0.434542 1_1:+18753970 Msa0012520:CDS
GTAGTTAATTGGTGCTCCTC+GGG 0.436292 1_1:+18752481 Msa0012520:intron
ATGTTTGCTCGTACACCAAC+TGG 0.437310 1_1:+18753376 Msa0012520:CDS
CTGACTATATCTTTGGATAA+CGG 0.437335 1_1:+18753043 Msa0012520:CDS
TCCAAAAGGAAGAGCAATGA+TGG 0.437443 1_1:+18754089 Msa0012520:CDS
GGACATCTACTTTGTTTGCT+GGG 0.438611 1_1:+18754816 Msa0012520:CDS
ACTTTAAACAAGATGTCAAA+TGG 0.439714 1_1:-18752812 None:intergenic
ATGTCTTCTCTGATGGAATT+GGG 0.442636 1_1:+18753566 Msa0012520:CDS
ATGATCCAATACAATAGGTT+TGG 0.443886 1_1:-18754890 None:intergenic
TGCAGCATCATTGAAAGAAA+TGG 0.444498 1_1:-18754012 None:intergenic
ACAAATTATGACTACAAGTT+GGG 0.449489 1_1:+18755682 Msa0012520:CDS
GTTTGTCGCCATTGCAGTAC+GGG 0.450868 1_1:+18751783 Msa0012520:CDS
AAAAGAGTTGGCATTGAAGA+TGG 0.454789 1_1:+18751553 Msa0012520:CDS
ACTAGGATATTTATTCCAAA+AGG 0.454891 1_1:+18754075 Msa0012520:CDS
ACCAAATATGTCTTCTCTGA+TGG 0.456825 1_1:+18753559 Msa0012520:CDS
TCTTGATTTGGACAAGCAAA+TGG 0.456873 1_1:-18755996 None:intergenic
AGGTATTTCTGCTGGGATAC+CGG 0.459811 1_1:-18755434 None:intergenic
AACAAATTATGACTACAAGT+TGG 0.460381 1_1:+18755681 Msa0012520:CDS
CGAAATCTTTCACCAAAAGA+AGG 0.462373 1_1:+18755773 Msa0012520:CDS
GCAACCATGGGGACAACATC+CGG 0.464035 1_1:-18752767 None:intergenic
CCACATCCAAATGAATGTTC+GGG 0.464069 1_1:+18754778 Msa0012520:CDS
GGATGCAGATGCAATTACTA+TGG 0.466501 1_1:+18755795 Msa0012520:CDS
TTCTCATGTAGTTAATGGTA+AGG 0.466581 1_1:+18754188 Msa0012520:CDS
AGATTTGTAGAGCAGTATAC+TGG 0.471303 1_1:+18751638 Msa0012520:CDS
GCTAAATATGCTGCTAGACT+TGG 0.472983 1_1:+18753457 Msa0012520:CDS
GATCCACTCTCCAATGTGTA+TGG 0.473705 1_1:-18752728 None:intergenic
GAGATACCGCTGGATCCATA+AGG 0.474376 1_1:+18753398 Msa0012520:CDS
CCCGAACATTCATTTGGATG+TGG 0.475636 1_1:-18754778 None:intergenic
AACTATGCCATTTCTAAGGA+TGG 0.476554 1_1:-18753287 None:intergenic
ACATCACCTGGGTGCAAGCA+CGG 0.476835 1_1:-18754228 None:intergenic
AAATATCTCTTGAACTTGCC+AGG 0.478082 1_1:+18753590 Msa0012520:CDS
TACATACTCAACGATTGTCT+TGG 0.479387 1_1:+18755298 Msa0012520:CDS
TTCAAAACACGAACATCACC+TGG 0.479689 1_1:-18754240 None:intergenic
AGACGACGAGGTATTTCTGC+TGG 0.480811 1_1:-18755442 None:intergenic
AGAAAAGATGTACTATTCAA+AGG 0.481118 1_1:+18752943 Msa0012520:CDS
TTCGTTTGTTGACGAGGAGT+TGG 0.481183 1_1:+18753189 Msa0012520:CDS
AGCAAATGCTGTTCGAATAC+GGG 0.481808 1_1:-18751702 None:intergenic
GGAAATCTGATGGACTACTA+TGG 0.482352 1_1:+18755703 Msa0012520:CDS
CATCACCTGGGTGCAAGCAC+GGG 0.486653 1_1:-18754227 None:intergenic
TGTACAATGAAGGTATGAAA+AGG 0.487456 1_1:+18755941 Msa0012520:CDS
CGATTTGAGACATTGATCTC+TGG 0.490515 1_1:-18753121 None:intergenic
AAACAACACAATCCACCATA+TGG 0.494194 1_1:-18754287 None:intergenic
TGTGCCAGCTTTGCGCCATA+TGG 0.496691 1_1:+18754272 Msa0012520:CDS
AGGTTCTTTGTCTGCAAAGA+CGG 0.496746 1_1:-18755341 None:intergenic
CCCATGGTTGCTCCTCCTCA+AGG 0.503965 1_1:+18752779 Msa0012520:CDS
TCTGTTATGAACCCGTGAAA+TGG 0.505396 1_1:+18752969 Msa0012520:CDS
TCTACAAATCTCTTTACATC+AGG 0.508391 1_1:-18751626 None:intergenic
GATTGAGCTGCATCAGCCAC+GGG 0.510977 1_1:+18752051 Msa0012520:CDS
TACATCCTTCACATTGGAAG+TGG 0.511315 1_1:+18755585 Msa0012520:CDS
TTTAGGAAAATCAAAAGAGT+TGG 0.512227 1_1:+18751541 Msa0012520:CDS
TCCACCATATGGCGCAAAGC+TGG 0.512736 1_1:-18754276 None:intergenic
TGGAACAAAGCTTCAGTCGC+AGG 0.512989 1_1:+18756052 Msa0012520:CDS
TTTATCTTCACGTATTTCCG+TGG 0.516397 1_1:+18753231 Msa0012520:CDS
CCTTCCAGATTCGGTATGGC+GGG 0.518413 1_1:+18753653 Msa0012520:CDS
TGGATCCATAAGGGAATGGA+TGG 0.518554 1_1:+18753408 Msa0012520:CDS
GTTTGAACGTCTTATTGTCA+TGG 0.519019 1_1:-18752000 None:intergenic
GAGATATTGTTCCAAGGCCA+AGG 0.519330 1_1:+18751837 Msa0012520:CDS
CGGTTTGGTATATGTTTGCA+GGG 0.520628 1_1:+18753063 Msa0012520:CDS
GACCGTTGTAGTTTCGGTAG+AGG 0.520868 1_1:-18753494 None:intergenic
TACGGATCCATTGGTCATCA+GGG 0.522490 1_1:-18752583 None:intergenic
GTTCGGGAAGTGATCTTGAT+GGG 0.522949 1_1:+18754794 Msa0012520:CDS
GCCTTCCAGATTCGGTATGG+CGG 0.526568 1_1:+18753652 Msa0012520:CDS
GTCTTTGCAGACAAAGAACC+TGG 0.526811 1_1:+18755343 Msa0012520:CDS
TTGGCAGAATCATACTCCAT+TGG 0.527097 1_1:-18754871 None:intergenic
CTATGGCTGTAAGGTCCCTA+AGG 0.529617 1_1:+18755812 Msa0012520:CDS
ATGAAATCTGGATATTCTGT+GGG 0.530843 1_1:-18755469 None:intergenic
GCTCATTACGAGGAAAGTGC+GGG 0.532321 1_1:+18752704 Msa0012520:CDS
ATGCAATTACTATGGCTGTA+AGG 0.534480 1_1:+18755803 Msa0012520:CDS
TACTATGGTGTGTACAATGA+AGG 0.536244 1_1:+18755931 Msa0012520:CDS
GTACAATGAAGGTATGAAAA+GGG 0.537276 1_1:+18755942 Msa0012520:CDS
AGAAGGAGAAAGCCCGGATG+AGG 0.540893 1_1:+18756016 Msa0012520:CDS
CTACAAGTTGGGAAATCTGA+TGG 0.542458 1_1:+18755693 Msa0012520:CDS
AATCTACTGTACGGATCCAT+TGG 0.542472 1_1:-18752592 None:intergenic
GCTCGAATGCATCCTCATCC+GGG 0.543079 1_1:-18756028 None:intergenic
CATGAAATCTGGATATTCTG+TGG 0.544047 1_1:-18755470 None:intergenic
TGCTCATTACGAGGAAAGTG+CGG 0.544258 1_1:+18752703 Msa0012520:CDS
CTCTATTACATCCTTCACAT+TGG 0.545111 1_1:+18755579 Msa0012520:CDS
ATTCGGTATGGCGGGTACAA+AGG 0.545736 1_1:+18753661 Msa0012520:CDS
TCAGGCACGGTCACATAATG+AGG 0.545799 1_1:-18751608 None:intergenic
TGATCTTTCAGCCATTTCAC+GGG 0.546636 1_1:-18752980 None:intergenic
CAGAATATTAGTGACCTCCC+CGG 0.547938 1_1:-18753950 None:intergenic
TCCTTGAGGAGGAGCAACCA+TGG 0.549153 1_1:-18752780 None:intergenic
GACAACTTTACCGATGATGT+TGG 0.549205 1_1:-18753700 None:intergenic
ACGTGTTTCGTTTGTTGACG+AGG 0.550365 1_1:+18753183 Msa0012520:CDS
GGTTCAATGAAGACGATACT+GGG 0.551204 1_1:+18755851 Msa0012520:CDS
CGACAAACTTCTGCTAGGTA+AGG 0.551575 1_1:-18751768 None:intergenic
ACCTCGAACAATTGATCCAA+TGG 0.552767 1_1:+18754855 Msa0012520:CDS
CAAGGTATTTCAACAAAGGA+CGG 0.557062 1_1:+18755556 Msa0012520:CDS
AAATCAAGAAGGAGAAAGCC+CGG 0.557265 1_1:+18756010 Msa0012520:CDS
GTTAATTCATTGGTTCAGCA+CGG 0.559458 1_1:+18752833 Msa0012520:CDS
AGATACCGCTGGATCCATAA+GGG 0.559980 1_1:+18753399 Msa0012520:CDS
TGCAAAGACGGTGTGTGCAT+TGG 0.560064 1_1:-18755329 None:intergenic
TGTTCGGGAAGTGATCTTGA+TGG 0.561954 1_1:+18754793 Msa0012520:CDS
CCACAAAAGTATACTTTGCA+AGG 0.563345 1_1:-18753097 None:intergenic
CTTATCCACTCTTGATGTCA+AGG 0.563615 1_1:+18753828 Msa0012520:CDS
CCGCTGGATCCATAAGGGAA+TGG 0.564392 1_1:+18753404 Msa0012520:CDS
CCTTGAGGAGGAGCAACCAT+GGG 0.565071 1_1:-18752779 None:intergenic
AGATTGAGCTGCATCAGCCA+CGG 0.566095 1_1:+18752050 Msa0012520:CDS
AGTTTGTCGCCATTGCAGTA+CGG 0.566631 1_1:+18751782 Msa0012520:CDS
TAAGGAAAGAAGCAAGGAGT+TGG 0.566896 1_1:+18755830 Msa0012520:CDS
TCTTCACGTATTTCCGTGGG+TGG 0.569260 1_1:+18753235 Msa0012520:CDS
TCTGCCTTCCAGATTCGGTA+TGG 0.570294 1_1:+18753649 Msa0012520:CDS
GAACCTGGAAAAGCAATGGC+AGG 0.572762 1_1:+18755358 Msa0012520:CDS
GAAATCTTTCACCAAAAGAA+GGG 0.573102 1_1:+18755774 Msa0012520:CDS
TCCATTGGATCAATTGTTCG+AGG 0.574408 1_1:-18754856 None:intergenic
GGAATTTGAATTCCTTGAGG+AGG 0.574898 1_1:-18752791 None:intergenic
TTAATTCATTGGTTCAGCAC+GGG 0.576593 1_1:+18752834 Msa0012520:CDS
TTTAGCCACTTCCAATGTGA+AGG 0.577389 1_1:-18755590 None:intergenic
GCCAGCTTTGCGCCATATGG+TGG 0.580852 1_1:+18754275 Msa0012520:CDS
ACTGAATCAGAAATCCTAAG+TGG 0.581610 1_1:+18755733 Msa0012520:CDS
CATATGCAAAAGCTTCTGCT+TGG 0.582602 1_1:+18755884 Msa0012520:CDS
GGATCATGATGTGGAGATTG+AGG 0.583073 1_1:+18754906 Msa0012520:CDS
GATGAGGATGCATTCGAGCA+TGG 0.583156 1_1:+18756032 Msa0012520:CDS
GTCGATTCAGATAACAAGGC+CGG 0.585395 1_1:-18753792 None:intergenic
TTCGGAAAATCTCTGCTGCT+AGG 0.585712 1_1:-18752665 None:intergenic
GACTGCCCAATACAAGTGCA+TGG 0.586682 1_1:-18752620 None:intergenic
GAGGTGGATTATTTGAACTA+CGG 0.587126 1_1:-18753015 None:intergenic
TTTGCTTGTCCAAATCAAGA+AGG 0.588553 1_1:+18755999 Msa0012520:CDS
GGCTGTTGATCCAACATCAT+CGG 0.589436 1_1:+18753690 Msa0012520:CDS
ACACCAACTGGAGATACCGC+TGG 0.589986 1_1:+18753388 Msa0012520:CDS
TACCGAATCTGGAAGGCAGA+CGG 0.592704 1_1:-18753646 None:intergenic
AGATTCGACGAAGGCACGCG+AGG 0.593891 1_1:+18753909 Msa0012520:CDS
AATGGAATTTGAATTCCTTG+AGG 0.596481 1_1:-18752794 None:intergenic
GTAGAGCAGTATACTGGTGA+AGG 0.597589 1_1:+18751644 Msa0012520:CDS
TTATCTTCACGTATTTCCGT+GGG 0.598036 1_1:+18753232 Msa0012520:CDS
AATTCAAGGTATTTCAACAA+AGG 0.600523 1_1:+18755552 Msa0012520:CDS
TAGGAGCTCCCGTACTGCAA+TGG 0.600705 1_1:-18751791 None:intergenic
GTTGCTATAAAGATAAGAGA+AGG 0.602774 1_1:+18751674 Msa0012520:CDS
CCAAAAGGAAGAGCAATGAT+GGG 0.604423 1_1:+18754090 Msa0012520:CDS
GATTCCGACATGGAATTCGA+CGG 0.605650 1_1:+18755622 Msa0012520:CDS
GACGACGAGGTATTTCTGCT+GGG 0.605891 1_1:-18755441 None:intergenic
ATGGAGTGAAATCTACTGTA+CGG 0.606480 1_1:-18752601 None:intergenic
GGACTTGATGTCTTCCGGGG+AGG 0.608943 1_1:+18753936 Msa0012520:CDS
ACACACCATAGTAACTATGA+TGG 0.610866 1_1:-18755921 None:intergenic
CAAAGAACCTGGAAAAGCAA+TGG 0.611171 1_1:+18755354 Msa0012520:CDS
TCTTGAACTTGCCAGGAGAG+TGG 0.617568 1_1:+18753597 Msa0012520:CDS
GATCCAGCGGTATCTCCAGT+TGG 0.618809 1_1:-18753391 None:intergenic
CTGAATCAGAAATCCTAAGT+GGG 0.618883 1_1:+18755734 Msa0012520:CDS
TGGCGGGTACAAAGGAGTTG+TGG 0.620817 1_1:+18753669 Msa0012520:CDS
ATTGGATCAATTGTTCGAGG+TGG 0.621802 1_1:-18754853 None:intergenic
AATGGCGACAAACTTCTGCT+AGG 0.621843 1_1:-18751773 None:intergenic
AGCTTTGCAAGTTCAACACA+TGG 0.622784 1_1:-18755382 None:intergenic
AGATATTGTTCCAAGGCCAA+GGG 0.622935 1_1:+18751838 Msa0012520:CDS
CAATCCGGATGTTGTCCCCA+TGG 0.625158 1_1:+18752763 Msa0012520:CDS
AGTTGCGTGAAAGTTCGCTA+TGG 0.625963 1_1:+18753353 Msa0012520:CDS
TGGAAAGAGATATTGTTCCA+AGG 0.625967 1_1:+18751831 Msa0012520:CDS
AACTGTCGATTCAGATAACA+AGG 0.626566 1_1:-18753796 None:intergenic
CCCGCCATACCGAATCTGGA+AGG 0.628292 1_1:-18753653 None:intergenic
CCATTCCCTTATGGATCCAG+CGG 0.628575 1_1:-18753404 None:intergenic
GGTCCCTAAGGAAAGAAGCA+AGG 0.629353 1_1:+18755824 Msa0012520:CDS
ACTGTCCTTGACATCAAGAG+TGG 0.630808 1_1:-18753833 None:intergenic
GGTCCATACACATTGGAGAG+TGG 0.632421 1_1:+18752725 Msa0012520:CDS
TATTGTATTGGATCATGATG+TGG 0.640414 1_1:+18754897 Msa0012520:CDS
TATATCAGTTCTTCCACCCA+CGG 0.641492 1_1:-18753248 None:intergenic
AGCAAATGGTAAACACACCA+TGG 0.644967 1_1:-18755982 None:intergenic
TTTGGACTTGATGTCTTCCG+GGG 0.650957 1_1:+18753933 Msa0012520:CDS
CGGATCCATTGGTCATCAGG+GGG 0.656023 1_1:-18752581 None:intergenic
AAATCTCTTTACATCAGGCA+CGG 0.656840 1_1:-18751621 None:intergenic
TTCGGGAAGTGATCTTGATG+GGG 0.658230 1_1:+18754795 Msa0012520:CDS
GGATCCATAAGGGAATGGAT+GGG 0.665338 1_1:+18753409 Msa0012520:CDS
ACGGATCCATTGGTCATCAG+GGG 0.669377 1_1:-18752582 None:intergenic
GGAAAACTTTGCTCATTACG+AGG 0.671589 1_1:+18752694 Msa0012520:CDS
TTCCTCTACCGAAACTACAA+CGG 0.682807 1_1:+18753492 Msa0012520:CDS
GTATACTGGTGAAGGAAGCG+TGG 0.685010 1_1:+18751652 Msa0012520:CDS
GATATAGTCAGTGACCGAGG+TGG 0.685145 1_1:-18753031 None:intergenic
TCAAAACACGAACATCACCT+GGG 0.687693 1_1:-18754239 None:intergenic
AAAGATATAGTCAGTGACCG+AGG 0.695377 1_1:-18753034 None:intergenic
AAGTGCGGGTCCATACACAT+TGG 0.697196 1_1:+18752718 Msa0012520:CDS
AGAGTCCTATGATTCCGACA+TGG 0.705341 1_1:+18755612 Msa0012520:CDS
AATACTAACAGATTCGACGA+AGG 0.714121 1_1:+18753900 Msa0012520:CDS
TGAAATCTGGATATTCTGTG+GGG 0.715614 1_1:-18755468 None:intergenic
AAAGCCGTCGAATTCCATGT+CGG 0.717438 1_1:-18755626 None:intergenic
CTTGAGGAGGAGCAACCATG+GGG 0.730391 1_1:-18752778 None:intergenic
CATCGGTAAAGTTGTCACTG+AGG 0.742662 1_1:+18753707 Msa0012520:CDS
ATTGAGCTGCATCAGCCACG+GGG 0.745981 1_1:+18752052 Msa0012520:CDS
GTAGTTCAAATAATCCACCT+CGG 0.751486 1_1:+18753017 Msa0012520:CDS
TCTGTGGGGATAAGACGACG+AGG 0.799851 1_1:-18755454 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATACAAAATTTGAAATAAAA+AGG - chr1_1:18752157-18752176 None:intergenic 10.0%
!! TCAATAAAATAGTTCTTAAA+AGG - chr1_1:18752560-18752579 None:intergenic 15.0%
!! AAAAAAAGTAAATTTAAGGA+TGG - chr1_1:18754569-18754588 None:intergenic 15.0%
!!! TATCATTTAGAATGTTATTT+TGG + chr1_1:18754665-18754684 Msa0012520:intron 15.0%
!!! TTTTATTATAAGTTGTAAAG+GGG - chr1_1:18755049-18755068 None:intergenic 15.0%
!!! CTTTTATTATAAGTTGTAAA+GGG - chr1_1:18755050-18755069 None:intergenic 15.0%
!!! TCTTTTATTATAAGTTGTAA+AGG - chr1_1:18755051-18755070 None:intergenic 15.0%
!! TCTAATATAAGTTAATAACA+TGG + chr1_1:18755238-18755257 Msa0012520:intron 15.0%
!!! ATAGTCAATGATTTTCTATA+TGG - chr1_1:18751426-18751445 None:intergenic 20.0%
!!! AGAAAAGATTATCTGTTTTA+TGG + chr1_1:18751915-18751934 Msa0012520:CDS 20.0%
!!! CTTGTTTAAAGTTAATTCAT+TGG + chr1_1:18752823-18752842 Msa0012520:CDS 20.0%
!! GCGTAAATACAAAAAATATA+TGG + chr1_1:18753150-18753169 Msa0012520:CDS 20.0%
!!! ATTTAGCTACATTTTTTATG+CGG - chr1_1:18753444-18753463 None:intergenic 20.0%
!! TTGTTCAATATTCTAACAAT+AGG + chr1_1:18754154-18754173 Msa0012520:CDS 20.0%
!! TGTTCAATATTCTAACAATA+GGG + chr1_1:18754155-18754174 Msa0012520:CDS 20.0%
!! CGCAAAAAAAAGTAAATTTA+AGG - chr1_1:18754573-18754592 None:intergenic 20.0%
!!! AATATTTTGCAGTTATTTAC+AGG + chr1_1:18754640-18754659 Msa0012520:intron 20.0%
!! AGAAAAAAACTTAACTATAG+AGG - chr1_1:18754716-18754735 None:intergenic 20.0%
!! TACAAATCAAAGAATGTAAT+AGG + chr1_1:18755514-18755533 Msa0012520:CDS 20.0%
!!! ATGTAATAGGAAAACTTTTT+AGG + chr1_1:18755527-18755546 Msa0012520:CDS 20.0%
!!! TGTAATAGGAAAACTTTTTA+GGG + chr1_1:18755528-18755547 Msa0012520:CDS 20.0%
!!! ATAATTTGTTTTGTGATAGA+AGG - chr1_1:18755671-18755690 None:intergenic 20.0%
! TCTCTCTTGAACAAATTTAA+GGG - chr1_1:18751364-18751383 None:intergenic 25.0%
!! TTGATTTTCCTAAATAGGAT+AGG - chr1_1:18751535-18751554 None:intergenic 25.0%
!!! CTCTTTTGATTTTCCTAAAT+AGG - chr1_1:18751540-18751559 None:intergenic 25.0%
! TTTAGGAAAATCAAAAGAGT+TGG + chr1_1:18751541-18751560 Msa0012520:CDS 25.0%
!! AGTAAAACAATTGAGTTGTA+TGG + chr1_1:18751581-18751600 Msa0012520:CDS 25.0%
!!! AGAATGTTAGAGTTGATTTT+GGG + chr1_1:18751945-18751964 Msa0012520:CDS 25.0%
!!! TACAAAGTATCTATTGATTC+AGG + chr1_1:18752081-18752100 Msa0012520:CDS 25.0%
! AAAAAGGAAAATGAAGAACA+TGG - chr1_1:18752141-18752160 None:intergenic 25.0%
!! ATTGGTTTATGGTACATTTA+TGG + chr1_1:18752278-18752297 Msa0012520:intron 25.0%
! GTTGTATTATATAGCTAGAT+TGG + chr1_1:18752324-18752343 Msa0012520:intron 25.0%
! ACTTTAAACAAGATGTCAAA+TGG - chr1_1:18752815-18752834 None:intergenic 25.0%
! AGAAAAGATGTACTATTCAA+AGG + chr1_1:18752943-18752962 Msa0012520:CDS 25.0%
! ACTAGGATATTTATTCCAAA+AGG + chr1_1:18754075-18754094 Msa0012520:CDS 25.0%
! AAAAACTTCACCATATTCTA+GGG - chr1_1:18754136-18754155 None:intergenic 25.0%
!! ATCATCTTCACTTCTTTTAA+CGG + chr1_1:18754461-18754480 Msa0012520:intron 25.0%
! TAATTCGCATTTGTAATTAC+AGG + chr1_1:18754508-18754527 Msa0012520:intron 25.0%
! AAACCATACATAAAGCTAAA+AGG - chr1_1:18754938-18754957 None:intergenic 25.0%
! ACTAAAAGATTTATACCATG+TGG - chr1_1:18755084-18755103 None:intergenic 25.0%
!! TCAGTTAAGTATGAATCTTT+TGG - chr1_1:18755193-18755212 None:intergenic 25.0%
! AAGTTAATAACATGGTTTCA+TGG + chr1_1:18755246-18755265 Msa0012520:intron 25.0%
!!! ACATTCTTTGATTTGTAGAT+AGG - chr1_1:18755511-18755530 None:intergenic 25.0%
!!! AAACTTTTTAGGGAAATTCA+AGG + chr1_1:18755538-18755557 Msa0012520:CDS 25.0%
!! AATTCAAGGTATTTCAACAA+AGG + chr1_1:18755552-18755571 Msa0012520:CDS 25.0%
! AACAAATTATGACTACAAGT+TGG + chr1_1:18755681-18755700 Msa0012520:CDS 25.0%
! ACAAATTATGACTACAAGTT+GGG + chr1_1:18755682-18755701 Msa0012520:CDS 25.0%
!! TTTTCATAATATTCCCACTT+AGG - chr1_1:18755750-18755769 None:intergenic 25.0%
CTCTCTCTTGAACAAATTTA+AGG - chr1_1:18751365-18751384 None:intergenic 30.0%
TTTCTTCTCCTATCCTATTT+AGG + chr1_1:18751524-18751543 Msa0012520:CDS 30.0%
TCTACAAATCTCTTTACATC+AGG - chr1_1:18751629-18751648 None:intergenic 30.0%
GTTGCTATAAAGATAAGAGA+AGG + chr1_1:18751674-18751693 Msa0012520:CDS 30.0%
! CATTTCCCGAACTTTTAAAT+AGG - chr1_1:18751813-18751832 None:intergenic 30.0%
CTATTTAAAAGTTCGGGAAA+TGG + chr1_1:18751811-18751830 Msa0012520:CDS 30.0%
! ATTATCTGTTTTATGGAGAG+AGG + chr1_1:18751922-18751941 Msa0012520:CDS 30.0%
!! GAGAATGTTAGAGTTGATTT+TGG + chr1_1:18751944-18751963 Msa0012520:CDS 30.0%
AGCTTTCATACGAGAATATT+TGG + chr1_1:18752026-18752045 Msa0012520:CDS 30.0%
ATGCATTAAATGCAACAAAC+AGG - chr1_1:18752190-18752209 None:intergenic 30.0%
!! ATCTCAAGAACATTGGTTTA+TGG + chr1_1:18752267-18752286 Msa0012520:intron 30.0%
CTCTTCTGTTTGTAGTTAAT+TGG + chr1_1:18752470-18752489 Msa0012520:intron 30.0%
AATGGAATTTGAATTCCTTG+AGG - chr1_1:18752797-18752816 None:intergenic 30.0%
CTGACTATATCTTTGGATAA+CGG + chr1_1:18753043-18753062 Msa0012520:CDS 30.0%
! TATATCTTTGGATAACGGTT+TGG + chr1_1:18753048-18753067 Msa0012520:CDS 30.0%
ATTCTTTCCATCCTTAGAAA+TGG + chr1_1:18753280-18753299 Msa0012520:CDS 30.0%
! CAATAACTATGCCATTTCTA+AGG - chr1_1:18753294-18753313 None:intergenic 30.0%
CTTAGAAATGGCATAGTTAT+TGG + chr1_1:18753292-18753311 Msa0012520:CDS 30.0%
GAAAGAAATGGTTCAACATT+AGG - chr1_1:18754003-18754022 None:intergenic 30.0%
CAAAAACTTCACCATATTCT+AGG - chr1_1:18754137-18754156 None:intergenic 30.0%
AGTCTTTCTCATGTAGTTAA+TGG + chr1_1:18754183-18754202 Msa0012520:CDS 30.0%
TTCTCATGTAGTTAATGGTA+AGG + chr1_1:18754188-18754207 Msa0012520:CDS 30.0%
GAAGTGAAGATGATCAAAAT+AGG - chr1_1:18754455-18754474 None:intergenic 30.0%
! TGGATGAGTTTTTCTTCAAT+GGG - chr1_1:18754605-18754624 None:intergenic 30.0%
!! ATATTTTAAGCCTACTTCTC+TGG - chr1_1:18754625-18754644 None:intergenic 30.0%
!!! TAGAATGTTATTTTGGCAAG+TGG + chr1_1:18754672-18754691 Msa0012520:intron 30.0%
ATGATCCAATACAATAGGTT+TGG - chr1_1:18754893-18754912 None:intergenic 30.0%
ACATCATGATCCAATACAAT+AGG - chr1_1:18754898-18754917 None:intergenic 30.0%
TATTGTATTGGATCATGATG+TGG + chr1_1:18754897-18754916 Msa0012520:CDS 30.0%
!!! TGTCCTTTTAGCTTTATGTA+TGG + chr1_1:18754932-18754951 Msa0012520:intron 30.0%
!! TCTTTTAGTTATTACCCCTT+TGG + chr1_1:18755095-18755114 Msa0012520:intron 30.0%
ATATTAGAATGCATGTTGCA+GGG - chr1_1:18755226-18755245 None:intergenic 30.0%
TATATTAGAATGCATGTTGC+AGG - chr1_1:18755227-18755246 None:intergenic 30.0%
ACAATCGTTGAGTATGTAAT+TGG - chr1_1:18755296-18755315 None:intergenic 30.0%
ATGAAATCTGGATATTCTGT+GGG - chr1_1:18755472-18755491 None:intergenic 30.0%
! GATTTGTAGATAGGTTTGTT+AGG - chr1_1:18755502-18755521 None:intergenic 30.0%
GAAATCTTTCACCAAAAGAA+GGG + chr1_1:18755774-18755793 Msa0012520:CDS 30.0%
ACTTACCATCATAGTTACTA+TGG + chr1_1:18755916-18755935 Msa0012520:CDS 30.0%
! TGTACAATGAAGGTATGAAA+AGG + chr1_1:18755941-18755960 Msa0012520:CDS 30.0%
! GTACAATGAAGGTATGAAAA+GGG + chr1_1:18755942-18755961 Msa0012520:CDS 30.0%
GCTTATGAACTTTCACTACT+TGG + chr1_1:18751394-18751413 Msa0012520:five_prime_UTR 35.0%
TGAACTTTCACTACTTGGAT+TGG + chr1_1:18751399-18751418 Msa0012520:five_prime_UTR 35.0%
! AAAAGAGTTGGCATTGAAGA+TGG + chr1_1:18751553-18751572 Msa0012520:CDS 35.0%
AAATCTCTTTACATCAGGCA+CGG - chr1_1:18751624-18751643 None:intergenic 35.0%
AGATTTGTAGAGCAGTATAC+TGG + chr1_1:18751638-18751657 Msa0012520:CDS 35.0%
TAGCAAATGCTGTTCGAATA+CGG - chr1_1:18751706-18751725 None:intergenic 35.0%
GGAGCTCCTATTTAAAAGTT+CGG + chr1_1:18751804-18751823 Msa0012520:CDS 35.0%
GAGCTCCTATTTAAAAGTTC+GGG + chr1_1:18751805-18751824 Msa0012520:CDS 35.0%
TGGAAAGAGATATTGTTCCA+AGG + chr1_1:18751831-18751850 Msa0012520:CDS 35.0%
AAACTGTGCAAAAATTCCCT+TGG - chr1_1:18751857-18751876 None:intergenic 35.0%
! AAGGGAATTTTTGCACAGTT+TGG + chr1_1:18751856-18751875 Msa0012520:CDS 35.0%
! ATTTTTGCACAGTTTGGATG+AGG + chr1_1:18751862-18751881 Msa0012520:CDS 35.0%
! GATGAGGTGAAACTGTATTT+TGG + chr1_1:18751878-18751897 Msa0012520:CDS 35.0%
!!! GTTAGAGTTGATTTTGGGAT+TGG + chr1_1:18751950-18751969 Msa0012520:CDS 35.0%
TTGGGATTGGAATGAAAAAG+TGG + chr1_1:18751963-18751982 Msa0012520:CDS 35.0%
! GTTTGAACGTCTTATTGTCA+TGG - chr1_1:18752003-18752022 None:intergenic 35.0%
TTCTTGAGATCACTAAGCTT+GGG - chr1_1:18752257-18752276 None:intergenic 35.0%
CTTAGTGATCTCAAGAACAT+TGG + chr1_1:18752260-18752279 Msa0012520:intron 35.0%
CTTACTGAACATGAGATGAA+AGG - chr1_1:18752389-18752408 None:intergenic 35.0%
ATGGAGTGAAATCTACTGTA+CGG - chr1_1:18752604-18752623 None:intergenic 35.0%
! CAGAGATTTTCCGAATTTCA+GGG + chr1_1:18752673-18752692 Msa0012520:CDS 35.0%
! GCAAAGTTTTCCCTGAAATT+CGG - chr1_1:18752686-18752705 None:intergenic 35.0%
! ATCACCTTTTTCTTGCAATC+CGG + chr1_1:18752748-18752767 Msa0012520:CDS 35.0%
!! GTTAATTCATTGGTTCAGCA+CGG + chr1_1:18752833-18752852 Msa0012520:CDS 35.0%
!! TTAATTCATTGGTTCAGCAC+GGG + chr1_1:18752834-18752853 Msa0012520:CDS 35.0%
! AGCTCAACATTCTTTCTAGT+TGG - chr1_1:18752908-18752927 None:intergenic 35.0%
!! GAGGTGGATTATTTGAACTA+CGG - chr1_1:18753018-18753037 None:intergenic 35.0%
GTAGTTCAAATAATCCACCT+CGG + chr1_1:18753017-18753036 Msa0012520:CDS 35.0%
! CCACAAAAGTATACTTTGCA+AGG - chr1_1:18753100-18753119 None:intergenic 35.0%
! CCTTGCAAAGTATACTTTTG+TGG + chr1_1:18753097-18753116 Msa0012520:CDS 35.0%
TTTATCTTCACGTATTTCCG+TGG + chr1_1:18753231-18753250 Msa0012520:CDS 35.0%
TTATCTTCACGTATTTCCGT+GGG + chr1_1:18753232-18753251 Msa0012520:CDS 35.0%
! AACTATGCCATTTCTAAGGA+TGG - chr1_1:18753290-18753309 None:intergenic 35.0%
ACCAAATATGTCTTCTCTGA+TGG + chr1_1:18753559-18753578 Msa0012520:CDS 35.0%
TCCATCAGAGAAGACATATT+TGG - chr1_1:18753563-18753582 None:intergenic 35.0%
TATGTCTTCTCTGATGGAAT+TGG + chr1_1:18753565-18753584 Msa0012520:CDS 35.0%
ATGTCTTCTCTGATGGAATT+GGG + chr1_1:18753566-18753585 Msa0012520:CDS 35.0%
AAATATCTCTTGAACTTGCC+AGG + chr1_1:18753590-18753609 Msa0012520:CDS 35.0%
! CAACACAGATTTGGATGTTT+TGG + chr1_1:18753756-18753775 Msa0012520:CDS 35.0%
! TTTTGGCATGTAGTAAGTTC+CGG + chr1_1:18753773-18753792 Msa0012520:CDS 35.0%
!! AACTGTCGATTCAGATAACA+AGG - chr1_1:18753799-18753818 None:intergenic 35.0%
AATACTAACAGATTCGACGA+AGG + chr1_1:18753900-18753919 Msa0012520:CDS 35.0%
CTGAAAGAGATGCTTATTTG+TGG + chr1_1:18753970-18753989 Msa0012520:CDS 35.0%
TGCAGCATCATTGAAAGAAA+TGG - chr1_1:18754015-18754034 None:intergenic 35.0%
AATGATGCTGCAGACATTTA+GGG + chr1_1:18754023-18754042 Msa0012520:CDS 35.0%
!! ATTTAGGGCCTCAAAACTTT+TGG + chr1_1:18754038-18754057 Msa0012520:CDS 35.0%
GAAACTAGAACCCTAGAATA+TGG + chr1_1:18754123-18754142 Msa0012520:CDS 35.0%
AAACAACACAATCCACCATA+TGG - chr1_1:18754290-18754309 None:intergenic 35.0%
!!! TGTGTTGTTTTCCCTCAAAA+AGG + chr1_1:18754300-18754319 Msa0012520:CDS 35.0%
! CTGGATGAGTTTTTCTTCAA+TGG - chr1_1:18754606-18754625 None:intergenic 35.0%
AAAAACTCATCCAGAGAAGT+AGG + chr1_1:18754612-18754631 Msa0012520:intron 35.0%
ACCACATCCAAATGAATGTT+CGG + chr1_1:18754777-18754796 Msa0012520:CDS 35.0%
TTCTGCCAAACCTATTGTAT+TGG + chr1_1:18754885-18754904 Msa0012520:CDS 35.0%
GAGCAATAATTGTTTCAGCT+AGG + chr1_1:18755149-18755168 Msa0012520:intron 35.0%
TTTCAGCTAGGATTCAAACT+CGG + chr1_1:18755161-18755180 Msa0012520:intron 35.0%
TACATACTCAACGATTGTCT+TGG + chr1_1:18755298-18755317 Msa0012520:CDS 35.0%
TGAAATCTGGATATTCTGTG+GGG - chr1_1:18755471-18755490 None:intergenic 35.0%
CATGAAATCTGGATATTCTG+TGG - chr1_1:18755473-18755492 None:intergenic 35.0%
CACAGAATATCCAGATTTCA+TGG + chr1_1:18755471-18755490 Msa0012520:CDS 35.0%
! TTAGGCTTTTCCATGAAATC+TGG - chr1_1:18755484-18755503 None:intergenic 35.0%
! CAAGGTATTTCAACAAAGGA+CGG + chr1_1:18755556-18755575 Msa0012520:CDS 35.0%
CTCTATTACATCCTTCACAT+TGG + chr1_1:18755579-18755598 Msa0012520:CDS 35.0%
ACTGAATCAGAAATCCTAAG+TGG + chr1_1:18755733-18755752 Msa0012520:CDS 35.0%
CTGAATCAGAAATCCTAAGT+GGG + chr1_1:18755734-18755753 Msa0012520:CDS 35.0%
CGAAATCTTTCACCAAAAGA+AGG + chr1_1:18755773-18755792 Msa0012520:CDS 35.0%
ATGCAATTACTATGGCTGTA+AGG + chr1_1:18755803-18755822 Msa0012520:CDS 35.0%
ACACACCATAGTAACTATGA+TGG - chr1_1:18755924-18755943 None:intergenic 35.0%
TACTATGGTGTGTACAATGA+AGG + chr1_1:18755931-18755950 Msa0012520:CDS 35.0%
! ACCATTTTCTAAGCTTTCCA+TGG + chr1_1:18755965-18755984 Msa0012520:CDS 35.0%
ACCATGGAAAGCTTAGAAAA+TGG - chr1_1:18755969-18755988 None:intergenic 35.0%
!! TCTTGATTTGGACAAGCAAA+TGG - chr1_1:18755999-18756018 None:intergenic 35.0%
TTTGCTTGTCCAAATCAAGA+AGG + chr1_1:18755999-18756018 Msa0012520:CDS 35.0%
AGCAAATGCTGTTCGAATAC+GGG - chr1_1:18751705-18751724 None:intergenic 40.0%
AGATATTGTTCCAAGGCCAA+GGG + chr1_1:18751838-18751857 Msa0012520:CDS 40.0%
!! TACTTTGTAGTTTTACCCCG+TGG - chr1_1:18752070-18752089 None:intergenic 40.0%
GTTCTTGAGATCACTAAGCT+TGG - chr1_1:18752258-18752277 None:intergenic 40.0%
TCATATGTGATGTGCAGCAA+AGG - chr1_1:18752434-18752453 None:intergenic 40.0%
! TGTAGTTAATTGGTGCTCCT+CGG + chr1_1:18752480-18752499 Msa0012520:intron 40.0%
GAATAAAGCTCAAAAACCCG+AGG - chr1_1:18752500-18752519 None:intergenic 40.0%
AATCTACTGTACGGATCCAT+TGG - chr1_1:18752595-18752614 None:intergenic 40.0%
TTCACTCCATGCACTTGTAT+TGG + chr1_1:18752614-18752633 Msa0012520:CDS 40.0%
TCACTCCATGCACTTGTATT+GGG + chr1_1:18752615-18752634 Msa0012520:CDS 40.0%
! GCAGAGATTTTCCGAATTTC+AGG + chr1_1:18752672-18752691 Msa0012520:CDS 40.0%
GGAAAACTTTGCTCATTACG+AGG + chr1_1:18752694-18752713 Msa0012520:CDS 40.0%
ACATCCGGATTGCAAGAAAA+AGG - chr1_1:18752755-18752774 None:intergenic 40.0%
GGAATTTGAATTCCTTGAGG+AGG - chr1_1:18752794-18752813 None:intergenic 40.0%
TCTGTTATGAACCCGTGAAA+TGG + chr1_1:18752969-18752988 Msa0012520:CDS 40.0%
TGATCTTTCAGCCATTTCAC+GGG - chr1_1:18752983-18753002 None:intergenic 40.0%
CTGATCTTTCAGCCATTTCA+CGG - chr1_1:18752984-18753003 None:intergenic 40.0%
AAAGATATAGTCAGTGACCG+AGG - chr1_1:18753037-18753056 None:intergenic 40.0%
! TCGGTCACTGACTATATCTT+TGG + chr1_1:18753036-18753055 Msa0012520:CDS 40.0%
!! ACGGTTTGGTATATGTTTGC+AGG + chr1_1:18753062-18753081 Msa0012520:CDS 40.0%
!! CGGTTTGGTATATGTTTGCA+GGG + chr1_1:18753063-18753082 Msa0012520:CDS 40.0%
! CGATTTGAGACATTGATCTC+TGG - chr1_1:18753124-18753143 None:intergenic 40.0%
TATATCAGTTCTTCCACCCA+CGG - chr1_1:18753251-18753270 None:intergenic 40.0%
GCTAAATATGCTGCTAGACT+TGG + chr1_1:18753457-18753476 Msa0012520:CDS 40.0%
! GCTAGACTTGGACAATCTTT+TGG + chr1_1:18753469-18753488 Msa0012520:CDS 40.0%
TTCCTCTACCGAAACTACAA+CGG + chr1_1:18753492-18753511 Msa0012520:CDS 40.0%
!!! ACATTTTTTAGCCACTCTCC+TGG - chr1_1:18753611-18753630 None:intergenic 40.0%
AGGAGAGTGGCTAAAAAATG+TGG + chr1_1:18753610-18753629 Msa0012520:CDS 40.0%
GACAACTTTACCGATGATGT+TGG - chr1_1:18753703-18753722 None:intergenic 40.0%
CGATTCAGACAACACAGATT+TGG + chr1_1:18753747-18753766 Msa0012520:CDS 40.0%
CTTATCCACTCTTGATGTCA+AGG + chr1_1:18753828-18753847 Msa0012520:CDS 40.0%
!! GTTTTGGACTTGATGTCTTC+CGG + chr1_1:18753931-18753950 Msa0012520:CDS 40.0%
! TTTTGGACTTGATGTCTTCC+GGG + chr1_1:18753932-18753951 Msa0012520:CDS 40.0%
CAATGATGCTGCAGACATTT+AGG + chr1_1:18754022-18754041 Msa0012520:CDS 40.0%
!!! CCTCAAAACTTTTGGAACTG+CGG + chr1_1:18754046-18754065 Msa0012520:CDS 40.0%
TCCAAAAGGAAGAGCAATGA+TGG + chr1_1:18754089-18754108 Msa0012520:CDS 40.0%
CCAAAAGGAAGAGCAATGAT+GGG + chr1_1:18754090-18754109 Msa0012520:CDS 40.0%
TCAAAACACGAACATCACCT+GGG - chr1_1:18754242-18754261 None:intergenic 40.0%
TTCAAAACACGAACATCACC+TGG - chr1_1:18754243-18754262 None:intergenic 40.0%
!! AGGTGATGTTCGTGTTTTGA+AGG + chr1_1:18754242-18754261 Msa0012520:CDS 40.0%
! TTTTCCCTCAAAAAGGTCAC+AGG + chr1_1:18754307-18754326 Msa0012520:CDS 40.0%
! TCTACCTGTGACCTTTTTGA+GGG - chr1_1:18754314-18754333 None:intergenic 40.0%
! ATCTACCTGTGACCTTTTTG+AGG - chr1_1:18754315-18754334 None:intergenic 40.0%
ACATTCATTTGGATGTGGTC+TGG - chr1_1:18754776-18754795 None:intergenic 40.0%
CCACATCCAAATGAATGTTC+GGG + chr1_1:18754778-18754797 Msa0012520:CDS 40.0%
TCACTTCCCGAACATTCATT+TGG - chr1_1:18754787-18754806 None:intergenic 40.0%
! GGACATCTACTTTGTTTGCT+GGG + chr1_1:18754816-18754835 Msa0012520:CDS 40.0%
ATTGGATCAATTGTTCGAGG+TGG - chr1_1:18754856-18754875 None:intergenic 40.0%
ACCTCGAACAATTGATCCAA+TGG + chr1_1:18754855-18754874 Msa0012520:CDS 40.0%
TCCATTGGATCAATTGTTCG+AGG - chr1_1:18754859-18754878 None:intergenic 40.0%
TTGGCAGAATCATACTCCAT+TGG - chr1_1:18754874-18754893 None:intergenic 40.0%
! TATTACCCCTTTGGTTTCTG+AGG + chr1_1:18755104-18755123 Msa0012520:intron 40.0%
! ATTACCCCTTTGGTTTCTGA+GGG + chr1_1:18755105-18755124 Msa0012520:intron 40.0%
! TTTTCCCTCAGAAACCAAAG+GGG - chr1_1:18755112-18755131 None:intergenic 40.0%
! CTTTTCCCTCAGAAACCAAA+GGG - chr1_1:18755113-18755132 None:intergenic 40.0%
! CTTTGGTTTCTGAGGGAAAA+GGG + chr1_1:18755112-18755131 Msa0012520:intron 40.0%
GAAAAGGGATTGTGGTAATC+TGG + chr1_1:18755127-18755146 Msa0012520:intron 40.0%
TTCAGCTAGGATTCAAACTC+GGG + chr1_1:18755162-18755181 Msa0012520:intron 40.0%
ATAACATGGTTTCATGGTGC+AGG + chr1_1:18755252-18755271 Msa0012520:intron 40.0%
AGGTTCTTTGTCTGCAAAGA+CGG - chr1_1:18755344-18755363 None:intergenic 40.0%
CAAAGAACCTGGAAAAGCAA+TGG + chr1_1:18755354-18755373 Msa0012520:CDS 40.0%
AGCTTTGCAAGTTCAACACA+TGG - chr1_1:18755385-18755404 None:intergenic 40.0%
! GCAGTTGACTTTCCAAAAAC+CGG + chr1_1:18755415-18755434 Msa0012520:CDS 40.0%
TACATCCTTCACATTGGAAG+TGG + chr1_1:18755585-18755604 Msa0012520:CDS 40.0%
TTTAGCCACTTCCAATGTGA+AGG - chr1_1:18755593-18755612 None:intergenic 40.0%
GAATTCCATGTCGGAATCAT+AGG - chr1_1:18755620-18755639 None:intergenic 40.0%
! CTACAAGTTGGGAAATCTGA+TGG + chr1_1:18755693-18755712 Msa0012520:CDS 40.0%
!! GGAAATCTGATGGACTACTA+TGG + chr1_1:18755703-18755722 Msa0012520:CDS 40.0%
GGATGCAGATGCAATTACTA+TGG + chr1_1:18755795-18755814 Msa0012520:CDS 40.0%
ACTCCTTGCTTCTTTCCTTA+GGG - chr1_1:18755830-18755849 None:intergenic 40.0%
AACTCCTTGCTTCTTTCCTT+AGG - chr1_1:18755831-18755850 None:intergenic 40.0%
TAAGGAAAGAAGCAAGGAGT+TGG + chr1_1:18755830-18755849 Msa0012520:CDS 40.0%
TGGTTCAATGAAGACGATAC+TGG + chr1_1:18755850-18755869 Msa0012520:CDS 40.0%
GGTTCAATGAAGACGATACT+GGG + chr1_1:18755851-18755870 Msa0012520:CDS 40.0%
CATATGCAAAAGCTTCTGCT+TGG + chr1_1:18755884-18755903 Msa0012520:CDS 40.0%
AGCAAATGGTAAACACACCA+TGG - chr1_1:18755985-18756004 None:intergenic 40.0%
AAATCAAGAAGGAGAAAGCC+CGG + chr1_1:18756010-18756029 Msa0012520:CDS 40.0%
GTAGAGCAGTATACTGGTGA+AGG + chr1_1:18751644-18751663 Msa0012520:CDS 45.0%
CGACAAACTTCTGCTAGGTA+AGG - chr1_1:18751771-18751790 None:intergenic 45.0%
AATGGCGACAAACTTCTGCT+AGG - chr1_1:18751776-18751795 None:intergenic 45.0%
AGTTTGTCGCCATTGCAGTA+CGG + chr1_1:18751782-18751801 Msa0012520:CDS 45.0%
GAGATATTGTTCCAAGGCCA+AGG + chr1_1:18751837-18751856 Msa0012520:CDS 45.0%
TGCAAAAATTCCCTTGGCCT+TGG - chr1_1:18751851-18751870 None:intergenic 45.0%
! GTAGTTAATTGGTGCTCCTC+GGG + chr1_1:18752481-18752500 Msa0012520:intron 45.0%
TACGGATCCATTGGTCATCA+GGG - chr1_1:18752586-18752605 None:intergenic 45.0%
TTCGGAAAATCTCTGCTGCT+AGG - chr1_1:18752668-18752687 None:intergenic 45.0%
TGCTCATTACGAGGAAAGTG+CGG + chr1_1:18752703-18752722 Msa0012520:CDS 45.0%
GATCCACTCTCCAATGTGTA+TGG - chr1_1:18752731-18752750 None:intergenic 45.0%
! ACGTGTTTCGTTTGTTGACG+AGG + chr1_1:18753183-18753202 Msa0012520:CDS 45.0%
! TTCGTTTGTTGACGAGGAGT+TGG + chr1_1:18753189-18753208 Msa0012520:CDS 45.0%
AGTTGCGTGAAAGTTCGCTA+TGG + chr1_1:18753353-18753372 Msa0012520:CDS 45.0%
ATGTTTGCTCGTACACCAAC+TGG + chr1_1:18753376-18753395 Msa0012520:CDS 45.0%
AGATACCGCTGGATCCATAA+GGG + chr1_1:18753399-18753418 Msa0012520:CDS 45.0%
TGGATCCATAAGGGAATGGA+TGG + chr1_1:18753408-18753427 Msa0012520:CDS 45.0%
GGATCCATAAGGGAATGGAT+GGG + chr1_1:18753409-18753428 Msa0012520:CDS 45.0%
ATCTCCCATCCATTCCCTTA+TGG - chr1_1:18753416-18753435 None:intergenic 45.0%
GGCTGTTGATCCAACATCAT+CGG + chr1_1:18753690-18753709 Msa0012520:CDS 45.0%
CATCGGTAAAGTTGTCACTG+AGG + chr1_1:18753707-18753726 Msa0012520:CDS 45.0%
! GTCGATTCAGATAACAAGGC+CGG - chr1_1:18753795-18753814 None:intergenic 45.0%
ACTGTCCTTGACATCAAGAG+TGG - chr1_1:18753836-18753855 None:intergenic 45.0%
TTTGGACTTGATGTCTTCCG+GGG + chr1_1:18753933-18753952 Msa0012520:CDS 45.0%
CAGAATATTAGTGACCTCCC+CGG - chr1_1:18753953-18753972 None:intergenic 45.0%
! CCGCAGTTCCAAAAGTTTTG+AGG - chr1_1:18754049-18754068 None:intergenic 45.0%
TGGAACTGCGGCAAAAAACT+AGG + chr1_1:18754058-18754077 Msa0012520:CDS 45.0%
! CCCATCATTGCTCTTCCTTT+TGG - chr1_1:18754093-18754112 None:intergenic 45.0%
!!! TGTTCGTGTTTTGAAGGCTG+TGG + chr1_1:18754248-18754267 Msa0012520:CDS 45.0%
CCCGAACATTCATTTGGATG+TGG - chr1_1:18754781-18754800 None:intergenic 45.0%
TGTTCGGGAAGTGATCTTGA+TGG + chr1_1:18754793-18754812 Msa0012520:CDS 45.0%
GTTCGGGAAGTGATCTTGAT+GGG + chr1_1:18754794-18754813 Msa0012520:CDS 45.0%
TTCGGGAAGTGATCTTGATG+GGG + chr1_1:18754795-18754814 Msa0012520:CDS 45.0%
! GGGACATCTACTTTGTTTGC+TGG + chr1_1:18754815-18754834 Msa0012520:CDS 45.0%
GGATCATGATGTGGAGATTG+AGG + chr1_1:18754906-18754925 Msa0012520:CDS 45.0%
AAAGACTCATGCAAGCCACA+TGG + chr1_1:18755066-18755085 Msa0012520:intron 45.0%
! CCTTTTCCCTCAGAAACCAA+AGG - chr1_1:18755114-18755133 None:intergenic 45.0%
! CCTTTGGTTTCTGAGGGAAA+AGG + chr1_1:18755111-18755130 Msa0012520:intron 45.0%
! TTCTGAGGGAAAAGGGATTG+TGG + chr1_1:18755119-18755138 Msa0012520:intron 45.0%
GTCTTTGCAGACAAAGAACC+TGG + chr1_1:18755343-18755362 Msa0012520:CDS 45.0%
! AGGTATTTCTGCTGGGATAC+CGG - chr1_1:18755437-18755456 None:intergenic 45.0%
AGAGTCCTATGATTCCGACA+TGG + chr1_1:18755612-18755631 Msa0012520:CDS 45.0%
GATTCCGACATGGAATTCGA+CGG + chr1_1:18755622-18755641 Msa0012520:CDS 45.0%
AAAGCCGTCGAATTCCATGT+CGG - chr1_1:18755629-18755648 None:intergenic 45.0%
CATGGAATTCGACGGCTTTA+TGG + chr1_1:18755630-18755649 Msa0012520:CDS 45.0%
! TGCATCTGCATCCCTTCTTT+TGG - chr1_1:18755788-18755807 None:intergenic 45.0%
GGGCTTTCTCCTTCTTGATT+TGG - chr1_1:18756011-18756030 None:intergenic 45.0%
TCAGGCACGGTCACATAATG+AGG - chr1_1:18751611-18751630 None:intergenic 50.0%
GTATACTGGTGAAGGAAGCG+TGG + chr1_1:18751652-18751671 Msa0012520:CDS 50.0%
GTTTGTCGCCATTGCAGTAC+GGG + chr1_1:18751783-18751802 Msa0012520:CDS 50.0%
AGATTGAGCTGCATCAGCCA+CGG + chr1_1:18752050-18752069 Msa0012520:CDS 50.0%
TTGATCCCCCTGATGACCAA+TGG + chr1_1:18752576-18752595 Msa0012520:CDS 50.0%
ACGGATCCATTGGTCATCAG+GGG - chr1_1:18752585-18752604 None:intergenic 50.0%
GTACGGATCCATTGGTCATC+AGG - chr1_1:18752587-18752606 None:intergenic 50.0%
GACTGCCCAATACAAGTGCA+TGG - chr1_1:18752623-18752642 None:intergenic 50.0%
! GCTCATTACGAGGAAAGTGC+GGG + chr1_1:18752704-18752723 Msa0012520:CDS 50.0%
AAGTGCGGGTCCATACACAT+TGG + chr1_1:18752718-18752737 Msa0012520:CDS 50.0%
GGTCCATACACATTGGAGAG+TGG + chr1_1:18752725-18752744 Msa0012520:CDS 50.0%
GATATAGTCAGTGACCGAGG+TGG - chr1_1:18753034-18753053 None:intergenic 50.0%
TCTTCACGTATTTCCGTGGG+TGG + chr1_1:18753235-18753254 Msa0012520:CDS 50.0%
GAGATACCGCTGGATCCATA+AGG + chr1_1:18753398-18753417 Msa0012520:CDS 50.0%
CCATTCCCTTATGGATCCAG+CGG - chr1_1:18753407-18753426 None:intergenic 50.0%
GACCGTTGTAGTTTCGGTAG+AGG - chr1_1:18753497-18753516 None:intergenic 50.0%
GCTGCTGACCGTTGTAGTTT+CGG - chr1_1:18753503-18753522 None:intergenic 50.0%
TCTTGAACTTGCCAGGAGAG+TGG + chr1_1:18753597-18753616 Msa0012520:CDS 50.0%
TACCGAATCTGGAAGGCAGA+CGG - chr1_1:18753649-18753668 None:intergenic 50.0%
! TCTGCCTTCCAGATTCGGTA+TGG + chr1_1:18753649-18753668 Msa0012520:CDS 50.0%
!! ATTCGGTATGGCGGGTACAA+AGG + chr1_1:18753661-18753680 Msa0012520:CDS 50.0%
TGCAAAGACGGTGTGTGCAT+TGG - chr1_1:18755332-18755351 None:intergenic 50.0%
GAACCTGGAAAAGCAATGGC+AGG + chr1_1:18755358-18755377 Msa0012520:CDS 50.0%
!!! TCTGCTGGGATACCGGTTTT+TGG - chr1_1:18755430-18755449 None:intergenic 50.0%
! GACGACGAGGTATTTCTGCT+GGG - chr1_1:18755444-18755463 None:intergenic 50.0%
! AGACGACGAGGTATTTCTGC+TGG - chr1_1:18755445-18755464 None:intergenic 50.0%
CTATGGCTGTAAGGTCCCTA+AGG + chr1_1:18755812-18755831 Msa0012520:CDS 50.0%
GGTCCCTAAGGAAAGAAGCA+AGG + chr1_1:18755824-18755843 Msa0012520:CDS 50.0%
TGCTCGAATGCATCCTCATC+CGG - chr1_1:18756032-18756051 None:intergenic 50.0%
GATGAGGATGCATTCGAGCA+TGG + chr1_1:18756032-18756051 Msa0012520:CDS 50.0%
TGGAACAAAGCTTCAGTCGC+AGG + chr1_1:18756052-18756071 Msa0012520:CDS 50.0%
TAGGAGCTCCCGTACTGCAA+TGG - chr1_1:18751794-18751813 None:intergenic 55.0%
GATTGAGCTGCATCAGCCAC+GGG + chr1_1:18752051-18752070 Msa0012520:CDS 55.0%
ATTGAGCTGCATCAGCCACG+GGG + chr1_1:18752052-18752071 Msa0012520:CDS 55.0%
CGGATCCATTGGTCATCAGG+GGG - chr1_1:18752584-18752603 None:intergenic 55.0%
CAATCCGGATGTTGTCCCCA+TGG + chr1_1:18752763-18752782 Msa0012520:CDS 55.0%
GCAACCATGGGGACAACATC+CGG - chr1_1:18752770-18752789 None:intergenic 55.0%
CTTGAGGAGGAGCAACCATG+GGG - chr1_1:18752781-18752800 None:intergenic 55.0%
CCTTGAGGAGGAGCAACCAT+GGG - chr1_1:18752782-18752801 None:intergenic 55.0%
TCCTTGAGGAGGAGCAACCA+TGG - chr1_1:18752783-18752802 None:intergenic 55.0%
GTTCAGCACGGGTGTCTTTC+AGG + chr1_1:18752845-18752864 Msa0012520:CDS 55.0%
ACACCAACTGGAGATACCGC+TGG + chr1_1:18753388-18753407 Msa0012520:CDS 55.0%
GATCCAGCGGTATCTCCAGT+TGG - chr1_1:18753394-18753413 None:intergenic 55.0%
CCGCTGGATCCATAAGGGAA+TGG + chr1_1:18753404-18753423 Msa0012520:CDS 55.0%
TGCCGTCTGCCTTCCAGATT+CGG + chr1_1:18753644-18753663 Msa0012520:CDS 55.0%
! GCCTTCCAGATTCGGTATGG+CGG + chr1_1:18753652-18753671 Msa0012520:CDS 55.0%
! CCTTCCAGATTCGGTATGGC+GGG + chr1_1:18753653-18753672 Msa0012520:CDS 55.0%
TGTACCCGCCATACCGAATC+TGG - chr1_1:18753660-18753679 None:intergenic 55.0%
! TGGCGGGTACAAAGGAGTTG+TGG + chr1_1:18753669-18753688 Msa0012520:CDS 55.0%
AAAAACCCGTGCTTGCACCC+AGG + chr1_1:18754222-18754241 Msa0012520:CDS 55.0%
ACATCACCTGGGTGCAAGCA+CGG - chr1_1:18754231-18754250 None:intergenic 55.0%
TGTGCCAGCTTTGCGCCATA+TGG + chr1_1:18754272-18754291 Msa0012520:CDS 55.0%
TCCACCATATGGCGCAAAGC+TGG - chr1_1:18754279-18754298 None:intergenic 55.0%
!! GGACCTGCCATTGCTTTTCC+AGG - chr1_1:18755364-18755383 None:intergenic 55.0%
TCTGTGGGGATAAGACGACG+AGG - chr1_1:18755457-18755476 None:intergenic 55.0%
AGAAGGAGAAAGCCCGGATG+AGG + chr1_1:18756016-18756035 Msa0012520:CDS 55.0%
GCTCGAATGCATCCTCATCC+GGG - chr1_1:18756031-18756050 None:intergenic 55.0%
CCCATGGTTGCTCCTCCTCA+AGG + chr1_1:18752779-18752798 Msa0012520:CDS 60.0%
CCCGCCATACCGAATCTGGA+AGG - chr1_1:18753656-18753675 None:intergenic 60.0%
! AGATTCGACGAAGGCACGCG+AGG + chr1_1:18753909-18753928 Msa0012520:CDS 60.0%
!! GACGAAGGCACGCGAGGTTT+TGG + chr1_1:18753915-18753934 Msa0012520:CDS 60.0%
GGACTTGATGTCTTCCGGGG+AGG + chr1_1:18753936-18753955 Msa0012520:CDS 60.0%
CATCACCTGGGTGCAAGCAC+GGG - chr1_1:18754230-18754249 None:intergenic 60.0%
GCCAGCTTTGCGCCATATGG+TGG + chr1_1:18754275-18754294 Msa0012520:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 18751338 18756089 18751338 ID=Msa0012520;Name=Msa0012520
chr1_1 mRNA 18751338 18756089 18751338 ID=Msa0012520-mRNA-1;Parent=Msa0012520;Name=Msa0012520-mRNA-1;_AED=0.35;_eAED=0.35;_QI=135|0.33|0.25|0.5|1|1|4|0|1146
chr1_1 exon 18751338 18752102 18751338 ID=Msa0012520-mRNA-1:exon:6925;Parent=Msa0012520-mRNA-1
chr1_1 exon 18752485 18754328 18752485 ID=Msa0012520-mRNA-1:exon:6926;Parent=Msa0012520-mRNA-1
chr1_1 exon 18754777 18754927 18754777 ID=Msa0012520-mRNA-1:exon:6927;Parent=Msa0012520-mRNA-1
chr1_1 exon 18755274 18756089 18755274 ID=Msa0012520-mRNA-1:exon:6928;Parent=Msa0012520-mRNA-1
chr1_1 five_prime_UTR 18751338 18751472 18751338 ID=Msa0012520-mRNA-1:five_prime_utr;Parent=Msa0012520-mRNA-1
chr1_1 CDS 18751473 18752102 18751473 ID=Msa0012520-mRNA-1:cds;Parent=Msa0012520-mRNA-1
chr1_1 CDS 18752485 18754328 18752485 ID=Msa0012520-mRNA-1:cds;Parent=Msa0012520-mRNA-1
chr1_1 CDS 18754777 18754927 18754777 ID=Msa0012520-mRNA-1:cds;Parent=Msa0012520-mRNA-1
chr1_1 CDS 18755274 18756089 18755274 ID=Msa0012520-mRNA-1:cds;Parent=Msa0012520-mRNA-1
Gene Sequence

>Msa0012520

ATGATTTTTTTGATGCAGAAGTTTAACAGTAACATTAATTTTTTGAATTATTTTCTTCTCCTATCCTATTTAGGAAAATCAAAAGAGTTGGCATTGAAGATGGTTAAAAGTAAAACAATTGAGTTGTATGGATTTCCTCATTATGTGACCGTGCCTGATGTAAAGAGATTTGTAGAGCAGTATACTGGTGAAGGAAGCGTGGTTGCTATAAAGATAAGAGAAGGCAAAGCCCGTATTCGAACAGCATTTGCTATTATTCAATTCACTACTAAAGATCATGCTACAGATATGATGACCTTACCTAGCAGAAGTTTGTCGCCATTGCAGTACGGGAGCTCCTATTTAAAAGTTCGGGAAATGGAAAGAGATATTGTTCCAAGGCCAAGGGAATTTTTGCACAGTTTGGATGAGGTGAAACTGTATTTTGGCTGTCAAATCTCAAAGAAAAGATTATCTGTTTTATGGAGAGAGGAGAATGTTAGAGTTGATTTTGGGATTGGAATGAAAAAGTGGCGATTCTCTTTGTGCCATGACAATAAGACGTTCAAACTTGAGCTTTCATACGAGAATATTTGGAAGATTGAGCTGCATCAGCCACGGGGTAAAACTACAAAGTATCTATTGATTCAGTTAATTGGTGCTCCTCGGGTTTTTGAGCTTTATTCTCATACTTCAGATGATGCATATAACATATACGAAGATCCTTTTAAGAACTATTTTATTGATCCCCCTGATGACCAATGGATCCGTACAGTAGATTTCACTCCATGCACTTGTATTGGGCAGTCTTCTGCTTTATGTCTAGAGCTTCCTAGCAGCAGAGATTTTCCGAATTTCAGGGAAAACTTTGCTCATTACGAGGAAAGTGCGGGTCCATACACATTGGAGAGTGGATCACCTTTTTCTTGCAATCCGGATGTTGTCCCCATGGTTGCTCCTCCTCAAGGAATTCAAATTCCATTTGACATCTTGTTTAAAGTTAATTCATTGGTTCAGCACGGGTGTCTTTCAGGTTCTGAACTCGATAATGCTTTCTATCATCTAGTTGATCCAACTAGAAAGAATGTTGAGCTTATTGAGAATGCTTTAGAAAAGATGTACTATTCAAAGGATTTCTGTTATGAACCCGTGAAATGGCTGAAAGATCAGTACGAAATGTACCGTAGTTCAAATAATCCACCTCGGTCACTGACTATATCTTTGGATAACGGTTTGGTATATGTTTGCAGGGCACAGATAACACCTTGCAAAGTATACTTTTGTGGTCCAGAGATCAATGTCTCAAATCGTGTTCTGCGTAAATACAAAAAATATATGGATAACTTTCTACGTGTTTCGTTTGTTGACGAGGAGTTGGATAAACTGTATTCGTCAGATTTATCTTCACGTATTTCCGTGGGTGGAAGAACTGATATATACTATAGAATTCTTTCCATCCTTAGAAATGGCATAGTTATTGGTGATAAGAAGTTTGAATTTCTAGCTTTCTCATCAAGTCAGTTGCGTGAAAGTTCGCTATGGATGTTTGCTCGTACACCAACTGGAGATACCGCTGGATCCATAAGGGAATGGATGGGAGATTTTAGCCGCATAAAAAATGTAGCTAAATATGCTGCTAGACTTGGACAATCTTTTGGTTCCTCTACCGAAACTACAACGGTCAGCAGCACTGAAATTGAAATTATTCTTGATGTACATAATAAAACCAAATATGTCTTCTCTGATGGAATTGGGAAAATATCTCTTGAACTTGCCAGGAGAGTGGCTAAAAAATGTGGTTATGATTCTATGCCGTCTGCCTTCCAGATTCGGTATGGCGGGTACAAAGGAGTTGTGGCTGTTGATCCAACATCATCGGTAAAGTTGTCACTGAGGATGAGCATGCTCAAGTACGATTCAGACAACACAGATTTGGATGTTTTGGCATGTAGTAAGTTCCGGCCTTGTTATCTGAATCGACAGTTGATTTCTCTCTTATCCACTCTTGATGTCAAGGACAGTGTTTTCGAGAAAAAACAAAAAGAAGCTGTTGATCAACTGAACACAATACTAACAGATTCGACGAAGGCACGCGAGGTTTTGGACTTGATGTCTTCCGGGGAGGTCACTAATATTCTGAAAGAGATGCTTATTTGTGGTTACAAGCCTAATGTTGAACCATTTCTTTCAATGATGCTGCAGACATTTAGGGCCTCAAAACTTTTGGAACTGCGGCAAAAAACTAGGATATTTATTCCAAAAGGAAGAGCAATGATGGGAGTTCTAGATGAAACTAGAACCCTAGAATATGGTGAAGTTTTTGTTCAATATTCTAACAATAGGGAAGACAGTCTTTCTCATGTAGTTAATGGTAAGGTTGTTGTAGCGAAAAACCCGTGCTTGCACCCAGGTGATGTTCGTGTTTTGAAGGCTGTGGATGTGCCAGCTTTGCGCCATATGGTGGATTGTGTTGTTTTCCCTCAAAAAGGTCACAGACCACATCCAAATGAATGTTCGGGAAGTGATCTTGATGGGGACATCTACTTTGTTTGCTGGGATTCTGAATTGATTCCACCTCGAACAATTGATCCAATGGAGTATGATTCTGCCAAACCTATTGTATTGGATCATGATGTGGAGATTGAGGAAGTGCAGCAGTATTTTACCAATTACATACTCAACGATTGTCTTGGAATAATTGCCAATGCACACACCGTCTTTGCAGACAAAGAACCTGGAAAAGCAATGGCAGGTCCATGTGTTGAACTTGCAAAGCTGTTCTCAACAGCAGTTGACTTTCCAAAAACCGGTATCCCAGCAGAAATACCTCGTCGTCTTATCCCCACAGAATATCCAGATTTCATGGAAAAGCCTAACAAACCTATCTACAAATCAAAGAATGTAATAGGAAAACTTTTTAGGGAAATTCAAGGTATTTCAACAAAGGACGGCTCTATTACATCCTTCACATTGGAAGTGGCTAAAGAGTCCTATGATTCCGACATGGAATTCGACGGCTTTATGGATTATGTTGATGATGCCTTCTATCACAAAACAAATTATGACTACAAGTTGGGAAATCTGATGGACTACTATGGTATCAAAACTGAATCAGAAATCCTAAGTGGGAATATTATGAAAATGTCGAAATCTTTCACCAAAAGAAGGGATGCAGATGCAATTACTATGGCTGTAAGGTCCCTAAGGAAAGAAGCAAGGAGTTGGTTCAATGAAGACGATACTGGGAGTGATGATGCATATGCAAAAGCTTCTGCTTGGTACTATGTTACTTACCATCATAGTTACTATGGTGTGTACAATGAAGGTATGAAAAGGGACCATTTTCTAAGCTTTCCATGGTGTGTTTACCATTTGCTTGTCCAAATCAAGAAGGAGAAAGCCCGGATGAGGATGCATTCGAGCATGGAACAAAGCTTCAGTCGCAGGTTGCGTCTTGACTGA
Protein sequence

>Msa0012520

MIFLMQKFNSNINFLNYFLLLSYLGKSKELALKMVKSKTIELYGFPHYVTVPDVKRFVEQYTGEGSVVAIKIREGKARIRTAFAIIQFTTKDHATDMMTLPSRSLSPLQYGSSYLKVREMERDIVPRPREFLHSLDEVKLYFGCQISKKRLSVLWREENVRVDFGIGMKKWRFSLCHDNKTFKLELSYENIWKIELHQPRGKTTKYLLIQLIGAPRVFELYSHTSDDAYNIYEDPFKNYFIDPPDDQWIRTVDFTPCTCIGQSSALCLELPSSRDFPNFRENFAHYEESAGPYTLESGSPFSCNPDVVPMVAPPQGIQIPFDILFKVNSLVQHGCLSGSELDNAFYHLVDPTRKNVELIENALEKMYYSKDFCYEPVKWLKDQYEMYRSSNNPPRSLTISLDNGLVYVCRAQITPCKVYFCGPEINVSNRVLRKYKKYMDNFLRVSFVDEELDKLYSSDLSSRISVGGRTDIYYRILSILRNGIVIGDKKFEFLAFSSSQLRESSLWMFARTPTGDTAGSIREWMGDFSRIKNVAKYAARLGQSFGSSTETTTVSSTEIEIILDVHNKTKYVFSDGIGKISLELARRVAKKCGYDSMPSAFQIRYGGYKGVVAVDPTSSVKLSLRMSMLKYDSDNTDLDVLACSKFRPCYLNRQLISLLSTLDVKDSVFEKKQKEAVDQLNTILTDSTKAREVLDLMSSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETRTLEYGEVFVQYSNNREDSLSHVVNGKVVVAKNPCLHPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPPRTIDPMEYDSAKPIVLDHDVEIEEVQQYFTNYILNDCLGIIANAHTVFADKEPGKAMAGPCVELAKLFSTAVDFPKTGIPAEIPRRLIPTEYPDFMEKPNKPIYKSKNVIGKLFREIQGISTKDGSITSFTLEVAKESYDSDMEFDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTESEILSGNIMKMSKSFTKRRDADAITMAVRSLRKEARSWFNEDDTGSDDAYAKASAWYYVTYHHSYYGVYNEGMKRDHFLSFPWCVYHLLVQIKKEKARMRMHSSMEQSFSRRLRLD*