AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0152420

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0152420 MtrunA17_Chr1g0161471 94.360 1117 59 1 34 1146 1 1117 0.0 2166
Msa0152420 MtrunA17_Chr1g0161491 82.804 1134 182 5 20 1146 1 1128 0.0 1920
Msa0152420 MtrunA17_Chr1g0161521 82.143 1120 190 3 34 1146 1 1117 0.0 1864
Msa0152420 MtrunA17_Chr1g0161511 81.996 1122 189 4 34 1146 1 1118 0.0 1857
Msa0152420 MtrunA17_Chr1g0161451 54.626 1124 462 10 38 1132 3 1107 0.0 1225
Msa0152420 MtrunA17_Chr4g0059271 39.119 1135 626 20 36 1127 7 1119 0.0 769
Msa0152420 MtrunA17_Chr3g0137841 36.540 1133 618 28 84 1137 81 1191 0.0 602
Msa0152420 MtrunA17_Chr4g0059261 55.294 85 38 0 885 969 1 85 1.64e-23 97.8
Msa0152420 MtrunA17_Chr6g0486821 21.865 654 372 27 532 1094 322 927 4.34e-14 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0152420 AT1G14790.1 61.470 1116 412 9 37 1145 2 1106 0.0 1377
Msa0152420 AT4G11130.1 38.489 1138 623 22 39 1128 11 1119 0.0 747
Msa0152420 AT3G49500.3 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0152420 AT3G49500.4 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0152420 AT3G49500.1 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0152420 AT3G49500.2 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0152420 AT3G49500.5 36.253 1073 582 27 133 1129 130 1176 1.21e-173 543
Msa0152420 AT2G19930.3 24.963 677 383 27 399 981 195 840 5.72e-29 125
Msa0152420 AT2G19930.2 24.963 677 383 27 399 981 201 846 6.34e-29 125
Msa0152420 AT2G19930.1 25.197 635 352 25 440 981 242 846 5.69e-28 122
Msa0152420 AT2G19910.2 25.209 599 324 23 470 969 265 838 2.15e-23 108
Msa0152420 AT2G19910.1 24.836 608 324 23 470 969 265 847 8.49e-22 102

Find 247 sgRNAs with CRISPR-Local

Find 348 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCTCTTGAACAAATTTA+AGG 0.056328 1_4:-15032894 None:intergenic
CATGGAATTCGACGGCTTTA+TGG 0.117089 1_4:+15037164 Msa0152420:CDS
CAATGATGCTGCAGACATTT+AGG 0.140329 1_4:+15035554 Msa0152420:CDS
GAGAATGTTAGAGTTGATTT+TGG 0.153035 1_4:+15033476 Msa0152420:CDS
TTTCTTCTCCTATCCTATTT+AGG 0.157937 1_4:+15033056 Msa0152420:CDS
CTCTTCTGTTTGTAGTTAAT+TGG 0.176066 1_4:+15034002 Msa0152420:intron
CCCATCATTGCTCTTCCTTT+TGG 0.190630 1_4:-15035622 None:intergenic
AGCTTTCATACGAGAATATT+TGG 0.203408 1_4:+15033558 Msa0152420:CDS
GTTCAGCACGGGTGTCTTTC+AGG 0.203501 1_4:+15034377 Msa0152420:CDS
CAACACAGATTTGGATGTTT+TGG 0.216117 1_4:+15035288 Msa0152420:CDS
CTTAGAAATGGCATAGTTAT+TGG 0.221122 1_4:+15034824 Msa0152420:CDS
AGTCTTTCTCATGTAGTTAA+TGG 0.233808 1_4:+15035715 Msa0152420:CDS
GATGAGGTGAAACTGTATTT+TGG 0.246324 1_4:+15033410 Msa0152420:CDS
GAAAGAAATGGTTCAACATT+AGG 0.258974 1_4:-15035532 None:intergenic
TCCATCAGAGAAGACATATT+TGG 0.262792 1_4:-15035092 None:intergenic
TGCATCTGCATCCCTTCTTT+TGG 0.269470 1_4:-15037319 None:intergenic
GGGACATCTACTTTGTTTGC+TGG 0.273457 1_4:+15036349 Msa0152420:CDS
GCTAGACTTGGACAATCTTT+TGG 0.274423 1_4:+15035001 Msa0152420:CDS
AATGATGCTGCAGACATTTA+GGG 0.280438 1_4:+15035555 Msa0152420:CDS
TCAATAAAATAGTTCTTAAA+AGG 0.281207 1_4:-15034089 None:intergenic
GGGCTTTCTCCTTCTTGATT+TGG 0.287942 1_4:-15037542 None:intergenic
TACAAAGTATCTATTGATTC+AGG 0.289065 1_4:+15033613 Msa0152420:CDS
TTGTTCAATATTCTAACAAT+AGG 0.290114 1_4:+15035686 Msa0152420:CDS
ATTTAGGGCCTCAAAACTTT+TGG 0.299042 1_4:+15035570 Msa0152420:CDS
TATGTCTTCTCTGATGGAAT+TGG 0.304418 1_4:+15035097 Msa0152420:CDS
ATCTCCCATCCATTCCCTTA+TGG 0.306555 1_4:-15034945 None:intergenic
GACGAAGGCACGCGAGGTTT+TGG 0.310522 1_4:+15035447 Msa0152420:CDS
ACAATCGTTGAGTATGTAAT+TGG 0.310788 1_4:-15036827 None:intergenic
ACATTCTTTGATTTGTAGAT+AGG 0.317451 1_4:-15037042 None:intergenic
TTCACTCCATGCACTTGTAT+TGG 0.328856 1_4:+15034146 Msa0152420:CDS
CGATTCAGACAACACAGATT+TGG 0.332074 1_4:+15035279 Msa0152420:CDS
TCGGTCACTGACTATATCTT+TGG 0.333336 1_4:+15034568 Msa0152420:CDS
GAATTCCATGTCGGAATCAT+AGG 0.337332 1_4:-15037151 None:intergenic
ACTTACCATCATAGTTACTA+TGG 0.338715 1_4:+15037450 Msa0152420:CDS
TGCTCGAATGCATCCTCATC+CGG 0.342460 1_4:-15037563 None:intergenic
ACGGTTTGGTATATGTTTGC+AGG 0.343120 1_4:+15034594 Msa0152420:CDS
AGTAAAACAATTGAGTTGTA+TGG 0.346819 1_4:+15033113 Msa0152420:CDS
TCACTCCATGCACTTGTATT+GGG 0.348220 1_4:+15034147 Msa0152420:CDS
GAAACTAGAACCCTAGAATA+TGG 0.354957 1_4:+15035655 Msa0152420:CDS
TACAAATCAAAGAATGTAAT+AGG 0.356384 1_4:+15037048 Msa0152420:CDS
TGTACCCGCCATACCGAATC+TGG 0.356571 1_4:-15035189 None:intergenic
GCTTATGAACTTTCACTACT+TGG 0.362200 1_4:+15032926 Msa0152420:five_prime_UTR
TGGTTCAATGAAGACGATAC+TGG 0.362216 1_4:+15037384 Msa0152420:CDS
TCTCTCTTGAACAAATTTAA+GGG 0.362945 1_4:-15032893 None:intergenic
AGCTCAACATTCTTTCTAGT+TGG 0.365437 1_4:-15034437 None:intergenic
GCTGCTGACCGTTGTAGTTT+CGG 0.366080 1_4:-15035032 None:intergenic
TCACTTCCCGAACATTCATT+TGG 0.366423 1_4:-15036318 None:intergenic
CTATTTAAAAGTTCGGGAAA+TGG 0.367680 1_4:+15033343 Msa0152420:CDS
GATTTGTAGATAGGTTTGTT+AGG 0.370243 1_4:-15037033 None:intergenic
GTACGGATCCATTGGTCATC+AGG 0.373811 1_4:-15034116 None:intergenic
AACTCCTTGCTTCTTTCCTT+AGG 0.379530 1_4:-15037362 None:intergenic
CAATAACTATGCCATTTCTA+AGG 0.379543 1_4:-15034823 None:intergenic
TTCTGCCAAACCTATTGTAT+TGG 0.383278 1_4:+15036419 Msa0152420:CDS
ACATCCGGATTGCAAGAAAA+AGG 0.385101 1_4:-15034284 None:intergenic
ACTCCTTGCTTCTTTCCTTA+GGG 0.387620 1_4:-15037361 None:intergenic
CTTGTTTAAAGTTAATTCAT+TGG 0.391465 1_4:+15034355 Msa0152420:CDS
GGAGCTCCTATTTAAAAGTT+CGG 0.391789 1_4:+15033336 Msa0152420:CDS
TGCCGTCTGCCTTCCAGATT+CGG 0.392143 1_4:+15035176 Msa0152420:CDS
ACCACATCCAAATGAATGTT+CGG 0.396067 1_4:+15036311 Msa0152420:CDS
TATATCTTTGGATAACGGTT+TGG 0.398083 1_4:+15034580 Msa0152420:CDS
ATTCTTTCCATCCTTAGAAA+TGG 0.402135 1_4:+15034812 Msa0152420:CDS
CACAGAATATCCAGATTTCA+TGG 0.402831 1_4:+15037005 Msa0152420:CDS
TAGCAAATGCTGTTCGAATA+CGG 0.406629 1_4:-15033235 None:intergenic
GAGCTCCTATTTAAAAGTTC+GGG 0.414378 1_4:+15033337 Msa0152420:CDS
TGTAGTTAATTGGTGCTCCT+CGG 0.416981 1_4:+15034012 Msa0152420:intron
TGAACTTTCACTACTTGGAT+TGG 0.422322 1_4:+15032931 Msa0152420:five_prime_UTR
TGTTCAATATTCTAACAATA+GGG 0.424933 1_4:+15035687 Msa0152420:CDS
CTGATCTTTCAGCCATTTCA+CGG 0.430314 1_4:-15034513 None:intergenic
ACCATGGAAAGCTTAGAAAA+TGG 0.431302 1_4:-15037500 None:intergenic
ACATCATGATCCAATACAAT+AGG 0.434504 1_4:-15036429 None:intergenic
CTGAAAGAGATGCTTATTTG+TGG 0.434542 1_4:+15035502 Msa0152420:CDS
GTAGTTAATTGGTGCTCCTC+GGG 0.436292 1_4:+15034013 Msa0152420:intron
ATGTTTGCTCGTACACCAAC+TGG 0.437310 1_4:+15034908 Msa0152420:CDS
CTGACTATATCTTTGGATAA+CGG 0.437335 1_4:+15034575 Msa0152420:CDS
TCCAAAAGGAAGAGCAATGA+TGG 0.437443 1_4:+15035621 Msa0152420:CDS
GGACATCTACTTTGTTTGCT+GGG 0.438611 1_4:+15036350 Msa0152420:CDS
ACTTTAAACAAGATGTCAAA+TGG 0.439714 1_4:-15034344 None:intergenic
ATGTCTTCTCTGATGGAATT+GGG 0.442636 1_4:+15035098 Msa0152420:CDS
ATGATCCAATACAATAGGTT+TGG 0.443886 1_4:-15036424 None:intergenic
TGCAGCATCATTGAAAGAAA+TGG 0.444498 1_4:-15035544 None:intergenic
ACAAATTATGACTACAAGTT+GGG 0.449489 1_4:+15037216 Msa0152420:CDS
GTTTGTCGCCATTGCAGTAC+GGG 0.450868 1_4:+15033315 Msa0152420:CDS
AAAAGAGTTGGCATTGAAGA+TGG 0.454789 1_4:+15033085 Msa0152420:CDS
ACTAGGATATTTATTCCAAA+AGG 0.454891 1_4:+15035607 Msa0152420:CDS
ACCAAATATGTCTTCTCTGA+TGG 0.456825 1_4:+15035091 Msa0152420:CDS
TCTTGATTTGGACAAGCAAA+TGG 0.456873 1_4:-15037530 None:intergenic
AGGTATTTCTGCTGGGATAC+CGG 0.459811 1_4:-15036968 None:intergenic
AACAAATTATGACTACAAGT+TGG 0.460381 1_4:+15037215 Msa0152420:CDS
CGAAATCTTTCACCAAAAGA+AGG 0.462373 1_4:+15037307 Msa0152420:CDS
GCAACCATGGGGACAACATC+CGG 0.464035 1_4:-15034299 None:intergenic
CCACATCCAAATGAATGTTC+GGG 0.464069 1_4:+15036312 Msa0152420:CDS
GGATGCAGATGCAATTACTA+TGG 0.466501 1_4:+15037329 Msa0152420:CDS
TTCTCATGTAGTTAATGGTA+AGG 0.466581 1_4:+15035720 Msa0152420:CDS
AGATTTGTAGAGCAGTATAC+TGG 0.471303 1_4:+15033170 Msa0152420:CDS
GCTAAATATGCTGCTAGACT+TGG 0.472983 1_4:+15034989 Msa0152420:CDS
GATCCACTCTCCAATGTGTA+TGG 0.473705 1_4:-15034260 None:intergenic
GAGATACCGCTGGATCCATA+AGG 0.474376 1_4:+15034930 Msa0152420:CDS
CCCGAACATTCATTTGGATG+TGG 0.475636 1_4:-15036312 None:intergenic
AACTATGCCATTTCTAAGGA+TGG 0.476554 1_4:-15034819 None:intergenic
ACATCACCTGGGTGCAAGCA+CGG 0.476835 1_4:-15035760 None:intergenic
AAATATCTCTTGAACTTGCC+AGG 0.478082 1_4:+15035122 Msa0152420:CDS
TACATACTCAACGATTGTCT+TGG 0.479387 1_4:+15036832 Msa0152420:CDS
TTCAAAACACGAACATCACC+TGG 0.479689 1_4:-15035772 None:intergenic
AGACGACGAGGTATTTCTGC+TGG 0.480811 1_4:-15036976 None:intergenic
AGAAAAGATGTACTATTCAA+AGG 0.481118 1_4:+15034475 Msa0152420:CDS
TTCGTTTGTTGACGAGGAGT+TGG 0.481183 1_4:+15034721 Msa0152420:CDS
AGCAAATGCTGTTCGAATAC+GGG 0.481808 1_4:-15033234 None:intergenic
GGAAATCTGATGGACTACTA+TGG 0.482352 1_4:+15037237 Msa0152420:CDS
CATCACCTGGGTGCAAGCAC+GGG 0.486653 1_4:-15035759 None:intergenic
TGTACAATGAAGGTATGAAA+AGG 0.487456 1_4:+15037475 Msa0152420:CDS
CGATTTGAGACATTGATCTC+TGG 0.490515 1_4:-15034653 None:intergenic
AAACAACACAATCCACCATA+TGG 0.494194 1_4:-15035819 None:intergenic
TGTGCCAGCTTTGCGCCATA+TGG 0.496691 1_4:+15035804 Msa0152420:CDS
AGGTTCTTTGTCTGCAAAGA+CGG 0.496746 1_4:-15036875 None:intergenic
CCCATGGTTGCTCCTCCTCA+AGG 0.503965 1_4:+15034311 Msa0152420:CDS
TCTGTTATGAACCCGTGAAA+TGG 0.505396 1_4:+15034501 Msa0152420:CDS
TCTACAAATCTCTTTACATC+AGG 0.508391 1_4:-15033158 None:intergenic
GATTGAGCTGCATCAGCCAC+GGG 0.510977 1_4:+15033583 Msa0152420:CDS
TACATCCTTCACATTGGAAG+TGG 0.511315 1_4:+15037119 Msa0152420:CDS
TTTAGGAAAATCAAAAGAGT+TGG 0.512227 1_4:+15033073 Msa0152420:CDS
TCCACCATATGGCGCAAAGC+TGG 0.512736 1_4:-15035808 None:intergenic
TGGAACAAAGCTTCAGTCGC+AGG 0.512989 1_4:+15037586 Msa0152420:CDS
TTTATCTTCACGTATTTCCG+TGG 0.516397 1_4:+15034763 Msa0152420:CDS
CCTTCCAGATTCGGTATGGC+GGG 0.518413 1_4:+15035185 Msa0152420:CDS
TGGATCCATAAGGGAATGGA+TGG 0.518554 1_4:+15034940 Msa0152420:CDS
GTTTGAACGTCTTATTGTCA+TGG 0.519019 1_4:-15033532 None:intergenic
GAGATATTGTTCCAAGGCCA+AGG 0.519330 1_4:+15033369 Msa0152420:CDS
CGGTTTGGTATATGTTTGCA+GGG 0.520628 1_4:+15034595 Msa0152420:CDS
GACCGTTGTAGTTTCGGTAG+AGG 0.520868 1_4:-15035026 None:intergenic
TACGGATCCATTGGTCATCA+GGG 0.522490 1_4:-15034115 None:intergenic
GTTCGGGAAGTGATCTTGAT+GGG 0.522949 1_4:+15036328 Msa0152420:CDS
GCCTTCCAGATTCGGTATGG+CGG 0.526568 1_4:+15035184 Msa0152420:CDS
GTCTTTGCAGACAAAGAACC+TGG 0.526811 1_4:+15036877 Msa0152420:CDS
TTGGCAGAATCATACTCCAT+TGG 0.527097 1_4:-15036405 None:intergenic
CTATGGCTGTAAGGTCCCTA+AGG 0.529617 1_4:+15037346 Msa0152420:CDS
ATGAAATCTGGATATTCTGT+GGG 0.530843 1_4:-15037003 None:intergenic
GCTCATTACGAGGAAAGTGC+GGG 0.532321 1_4:+15034236 Msa0152420:CDS
ATGCAATTACTATGGCTGTA+AGG 0.534480 1_4:+15037337 Msa0152420:CDS
TACTATGGTGTGTACAATGA+AGG 0.536244 1_4:+15037465 Msa0152420:CDS
GTACAATGAAGGTATGAAAA+GGG 0.537276 1_4:+15037476 Msa0152420:CDS
AGAAGGAGAAAGCCCGGATG+AGG 0.540893 1_4:+15037550 Msa0152420:CDS
CTACAAGTTGGGAAATCTGA+TGG 0.542458 1_4:+15037227 Msa0152420:CDS
AATCTACTGTACGGATCCAT+TGG 0.542472 1_4:-15034124 None:intergenic
GCTCGAATGCATCCTCATCC+GGG 0.543079 1_4:-15037562 None:intergenic
CATGAAATCTGGATATTCTG+TGG 0.544047 1_4:-15037004 None:intergenic
TGCTCATTACGAGGAAAGTG+CGG 0.544258 1_4:+15034235 Msa0152420:CDS
CTCTATTACATCCTTCACAT+TGG 0.545111 1_4:+15037113 Msa0152420:CDS
ATTCGGTATGGCGGGTACAA+AGG 0.545736 1_4:+15035193 Msa0152420:CDS
TCAGGCACGGTCACATAATG+AGG 0.545799 1_4:-15033140 None:intergenic
TGATCTTTCAGCCATTTCAC+GGG 0.546636 1_4:-15034512 None:intergenic
CAGAATATTAGTGACCTCCC+CGG 0.547938 1_4:-15035482 None:intergenic
TCCTTGAGGAGGAGCAACCA+TGG 0.549153 1_4:-15034312 None:intergenic
GACAACTTTACCGATGATGT+TGG 0.549205 1_4:-15035232 None:intergenic
ACGTGTTTCGTTTGTTGACG+AGG 0.550365 1_4:+15034715 Msa0152420:CDS
GGTTCAATGAAGACGATACT+GGG 0.551204 1_4:+15037385 Msa0152420:CDS
CGACAAACTTCTGCTAGGTA+AGG 0.551575 1_4:-15033300 None:intergenic
ACCTCGAACAATTGATCCAA+TGG 0.552767 1_4:+15036389 Msa0152420:CDS
CAAGGTATTTCAACAAAGGA+CGG 0.557062 1_4:+15037090 Msa0152420:CDS
AAATCAAGAAGGAGAAAGCC+CGG 0.557265 1_4:+15037544 Msa0152420:CDS
GTTAATTCATTGGTTCAGCA+CGG 0.559458 1_4:+15034365 Msa0152420:CDS
AGATACCGCTGGATCCATAA+GGG 0.559980 1_4:+15034931 Msa0152420:CDS
TGCAAAGACGGTGTGTGCAT+TGG 0.560064 1_4:-15036863 None:intergenic
TGTTCGGGAAGTGATCTTGA+TGG 0.561954 1_4:+15036327 Msa0152420:CDS
CCACAAAAGTATACTTTGCA+AGG 0.563345 1_4:-15034629 None:intergenic
CTTATCCACTCTTGATGTCA+AGG 0.563615 1_4:+15035360 Msa0152420:CDS
CCGCTGGATCCATAAGGGAA+TGG 0.564392 1_4:+15034936 Msa0152420:CDS
CCTTGAGGAGGAGCAACCAT+GGG 0.565071 1_4:-15034311 None:intergenic
AGATTGAGCTGCATCAGCCA+CGG 0.566095 1_4:+15033582 Msa0152420:CDS
AGTTTGTCGCCATTGCAGTA+CGG 0.566631 1_4:+15033314 Msa0152420:CDS
TAAGGAAAGAAGCAAGGAGT+TGG 0.566896 1_4:+15037364 Msa0152420:CDS
TCTTCACGTATTTCCGTGGG+TGG 0.569260 1_4:+15034767 Msa0152420:CDS
TCTGCCTTCCAGATTCGGTA+TGG 0.570294 1_4:+15035181 Msa0152420:CDS
GAACCTGGAAAAGCAATGGC+AGG 0.572762 1_4:+15036892 Msa0152420:CDS
GAAATCTTTCACCAAAAGAA+GGG 0.573102 1_4:+15037308 Msa0152420:CDS
TCCATTGGATCAATTGTTCG+AGG 0.574408 1_4:-15036390 None:intergenic
GGAATTTGAATTCCTTGAGG+AGG 0.574898 1_4:-15034323 None:intergenic
TTAATTCATTGGTTCAGCAC+GGG 0.576593 1_4:+15034366 Msa0152420:CDS
TTTAGCCACTTCCAATGTGA+AGG 0.577389 1_4:-15037124 None:intergenic
GCCAGCTTTGCGCCATATGG+TGG 0.580852 1_4:+15035807 Msa0152420:CDS
ACTGAATCAGAAATCCTAAG+TGG 0.581610 1_4:+15037267 Msa0152420:CDS
CATATGCAAAAGCTTCTGCT+TGG 0.582602 1_4:+15037418 Msa0152420:CDS
GGATCATGATGTGGAGATTG+AGG 0.583073 1_4:+15036440 Msa0152420:CDS
GATGAGGATGCATTCGAGCA+TGG 0.583156 1_4:+15037566 Msa0152420:CDS
GTCGATTCAGATAACAAGGC+CGG 0.585395 1_4:-15035324 None:intergenic
TTCGGAAAATCTCTGCTGCT+AGG 0.585712 1_4:-15034197 None:intergenic
GACTGCCCAATACAAGTGCA+TGG 0.586682 1_4:-15034152 None:intergenic
GAGGTGGATTATTTGAACTA+CGG 0.587126 1_4:-15034547 None:intergenic
TTTGCTTGTCCAAATCAAGA+AGG 0.588553 1_4:+15037533 Msa0152420:CDS
GGCTGTTGATCCAACATCAT+CGG 0.589436 1_4:+15035222 Msa0152420:CDS
ACACCAACTGGAGATACCGC+TGG 0.589986 1_4:+15034920 Msa0152420:CDS
TACCGAATCTGGAAGGCAGA+CGG 0.592704 1_4:-15035178 None:intergenic
AGATTCGACGAAGGCACGCG+AGG 0.593891 1_4:+15035441 Msa0152420:CDS
AATGGAATTTGAATTCCTTG+AGG 0.596481 1_4:-15034326 None:intergenic
GTAGAGCAGTATACTGGTGA+AGG 0.597589 1_4:+15033176 Msa0152420:CDS
TTATCTTCACGTATTTCCGT+GGG 0.598036 1_4:+15034764 Msa0152420:CDS
AATTCAAGGTATTTCAACAA+AGG 0.600523 1_4:+15037086 Msa0152420:CDS
TAGGAGCTCCCGTACTGCAA+TGG 0.600705 1_4:-15033323 None:intergenic
GTTGCTATAAAGATAAGAGA+AGG 0.602774 1_4:+15033206 Msa0152420:CDS
CCAAAAGGAAGAGCAATGAT+GGG 0.604423 1_4:+15035622 Msa0152420:CDS
GATTCCGACATGGAATTCGA+CGG 0.605650 1_4:+15037156 Msa0152420:CDS
GACGACGAGGTATTTCTGCT+GGG 0.605891 1_4:-15036975 None:intergenic
ATGGAGTGAAATCTACTGTA+CGG 0.606480 1_4:-15034133 None:intergenic
GGACTTGATGTCTTCCGGGG+AGG 0.608943 1_4:+15035468 Msa0152420:CDS
ACACACCATAGTAACTATGA+TGG 0.610866 1_4:-15037455 None:intergenic
CAAAGAACCTGGAAAAGCAA+TGG 0.611171 1_4:+15036888 Msa0152420:CDS
TCTTGAACTTGCCAGGAGAG+TGG 0.617568 1_4:+15035129 Msa0152420:CDS
GATCCAGCGGTATCTCCAGT+TGG 0.618809 1_4:-15034923 None:intergenic
CTGAATCAGAAATCCTAAGT+GGG 0.618883 1_4:+15037268 Msa0152420:CDS
TGGCGGGTACAAAGGAGTTG+TGG 0.620817 1_4:+15035201 Msa0152420:CDS
ATTGGATCAATTGTTCGAGG+TGG 0.621802 1_4:-15036387 None:intergenic
AATGGCGACAAACTTCTGCT+AGG 0.621843 1_4:-15033305 None:intergenic
AGCTTTGCAAGTTCAACACA+TGG 0.622784 1_4:-15036916 None:intergenic
AGATATTGTTCCAAGGCCAA+GGG 0.622935 1_4:+15033370 Msa0152420:CDS
CAATCCGGATGTTGTCCCCA+TGG 0.625158 1_4:+15034295 Msa0152420:CDS
AGTTGCGTGAAAGTTCGCTA+TGG 0.625963 1_4:+15034885 Msa0152420:CDS
TGGAAAGAGATATTGTTCCA+AGG 0.625967 1_4:+15033363 Msa0152420:CDS
AACTGTCGATTCAGATAACA+AGG 0.626566 1_4:-15035328 None:intergenic
CCCGCCATACCGAATCTGGA+AGG 0.628292 1_4:-15035185 None:intergenic
CCATTCCCTTATGGATCCAG+CGG 0.628575 1_4:-15034936 None:intergenic
GGTCCCTAAGGAAAGAAGCA+AGG 0.629353 1_4:+15037358 Msa0152420:CDS
ACTGTCCTTGACATCAAGAG+TGG 0.630808 1_4:-15035365 None:intergenic
GGTCCATACACATTGGAGAG+TGG 0.632421 1_4:+15034257 Msa0152420:CDS
TATTGTATTGGATCATGATG+TGG 0.640414 1_4:+15036431 Msa0152420:CDS
TATATCAGTTCTTCCACCCA+CGG 0.641492 1_4:-15034780 None:intergenic
AGCAAATGGTAAACACACCA+TGG 0.644967 1_4:-15037516 None:intergenic
TTTGGACTTGATGTCTTCCG+GGG 0.650957 1_4:+15035465 Msa0152420:CDS
CGGATCCATTGGTCATCAGG+GGG 0.656023 1_4:-15034113 None:intergenic
AAATCTCTTTACATCAGGCA+CGG 0.656840 1_4:-15033153 None:intergenic
TTCGGGAAGTGATCTTGATG+GGG 0.658230 1_4:+15036329 Msa0152420:CDS
GGATCCATAAGGGAATGGAT+GGG 0.665338 1_4:+15034941 Msa0152420:CDS
ACGGATCCATTGGTCATCAG+GGG 0.669377 1_4:-15034114 None:intergenic
GGAAAACTTTGCTCATTACG+AGG 0.671589 1_4:+15034226 Msa0152420:CDS
TTCCTCTACCGAAACTACAA+CGG 0.682807 1_4:+15035024 Msa0152420:CDS
GTATACTGGTGAAGGAAGCG+TGG 0.685010 1_4:+15033184 Msa0152420:CDS
GATATAGTCAGTGACCGAGG+TGG 0.685145 1_4:-15034563 None:intergenic
TCAAAACACGAACATCACCT+GGG 0.687693 1_4:-15035771 None:intergenic
AAAGATATAGTCAGTGACCG+AGG 0.695377 1_4:-15034566 None:intergenic
AAGTGCGGGTCCATACACAT+TGG 0.697196 1_4:+15034250 Msa0152420:CDS
AGAGTCCTATGATTCCGACA+TGG 0.705341 1_4:+15037146 Msa0152420:CDS
AATACTAACAGATTCGACGA+AGG 0.714121 1_4:+15035432 Msa0152420:CDS
TGAAATCTGGATATTCTGTG+GGG 0.715614 1_4:-15037002 None:intergenic
AAAGCCGTCGAATTCCATGT+CGG 0.717438 1_4:-15037160 None:intergenic
CTTGAGGAGGAGCAACCATG+GGG 0.730391 1_4:-15034310 None:intergenic
CATCGGTAAAGTTGTCACTG+AGG 0.742662 1_4:+15035239 Msa0152420:CDS
ATTGAGCTGCATCAGCCACG+GGG 0.745981 1_4:+15033584 Msa0152420:CDS
GTAGTTCAAATAATCCACCT+CGG 0.751486 1_4:+15034549 Msa0152420:CDS
TCTGTGGGGATAAGACGACG+AGG 0.799851 1_4:-15036988 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATACAAAATTTGAAATAAAA+AGG - chr1_4:15033689-15033708 None:intergenic 10.0%
!! TCAATAAAATAGTTCTTAAA+AGG - chr1_4:15034092-15034111 None:intergenic 15.0%
!! AAAAAAAGTAAATTTAAGGA+TGG - chr1_4:15036101-15036120 None:intergenic 15.0%
!!! AATATTTTGCAGTTATTTAT+AGG + chr1_4:15036172-15036191 Msa0152420:intron 15.0%
!!! TATCATTTAGAATGTTATTT+TGG + chr1_4:15036197-15036216 Msa0152420:intron 15.0%
!!! TTTTATTATAAGTTGTAAAG+GGG - chr1_4:15036583-15036602 None:intergenic 15.0%
!!! CTTTTATTATAAGTTGTAAA+GGG - chr1_4:15036584-15036603 None:intergenic 15.0%
!!! TCTTTTATTATAAGTTGTAA+AGG - chr1_4:15036585-15036604 None:intergenic 15.0%
!! TCTAATATAAGTTAATAACA+TGG + chr1_4:15036772-15036791 Msa0152420:intron 15.0%
!!! ATAGTCAATGATTTTCTATA+TGG - chr1_4:15032958-15032977 None:intergenic 20.0%
!!! AGAAAAGATTATCTGTTTTA+TGG + chr1_4:15033447-15033466 Msa0152420:CDS 20.0%
!!! CTTGTTTAAAGTTAATTCAT+TGG + chr1_4:15034355-15034374 Msa0152420:CDS 20.0%
!! GCGTAAATACAAAAAATATA+TGG + chr1_4:15034682-15034701 Msa0152420:CDS 20.0%
!!! ATTTAGCTACATTTTTTATG+CGG - chr1_4:15034976-15034995 None:intergenic 20.0%
!! TTGTTCAATATTCTAACAAT+AGG + chr1_4:15035686-15035705 Msa0152420:CDS 20.0%
!! TGTTCAATATTCTAACAATA+GGG + chr1_4:15035687-15035706 Msa0152420:CDS 20.0%
!! TAATTCGCATTTGTAATTAA+AGG + chr1_4:15036040-15036059 Msa0152420:intron 20.0%
!! CGCAAAAAAAAGTAAATTTA+AGG - chr1_4:15036105-15036124 None:intergenic 20.0%
!! AGAAAAAAACTTAACTATAG+AGG - chr1_4:15036248-15036267 None:intergenic 20.0%
!! TACAAATCAAAGAATGTAAT+AGG + chr1_4:15037048-15037067 Msa0152420:CDS 20.0%
!!! ATGTAATAGGAAAACTTTTT+AGG + chr1_4:15037061-15037080 Msa0152420:CDS 20.0%
!!! TGTAATAGGAAAACTTTTTA+GGG + chr1_4:15037062-15037081 Msa0152420:CDS 20.0%
!!! ATAATTTGTTTTGTGATAGA+AGG - chr1_4:15037205-15037224 None:intergenic 20.0%
! TCTCTCTTGAACAAATTTAA+GGG - chr1_4:15032896-15032915 None:intergenic 25.0%
!! TTGATTTTCCTAAATAGGAT+AGG - chr1_4:15033067-15033086 None:intergenic 25.0%
!!! CTCTTTTGATTTTCCTAAAT+AGG - chr1_4:15033072-15033091 None:intergenic 25.0%
! TTTAGGAAAATCAAAAGAGT+TGG + chr1_4:15033073-15033092 Msa0152420:CDS 25.0%
!! AGTAAAACAATTGAGTTGTA+TGG + chr1_4:15033113-15033132 Msa0152420:CDS 25.0%
!!! AGAATGTTAGAGTTGATTTT+GGG + chr1_4:15033477-15033496 Msa0152420:CDS 25.0%
!!! TACAAAGTATCTATTGATTC+AGG + chr1_4:15033613-15033632 Msa0152420:CDS 25.0%
! AAAAAGGAAAATGAAGAACA+TGG - chr1_4:15033673-15033692 None:intergenic 25.0%
!! ATTGGTTTATGGTACATTTA+TGG + chr1_4:15033810-15033829 Msa0152420:intron 25.0%
! GTTGTATTATATAGCTAGAT+TGG + chr1_4:15033856-15033875 Msa0152420:intron 25.0%
! ACTTTAAACAAGATGTCAAA+TGG - chr1_4:15034347-15034366 None:intergenic 25.0%
! AGAAAAGATGTACTATTCAA+AGG + chr1_4:15034475-15034494 Msa0152420:CDS 25.0%
! ACTAGGATATTTATTCCAAA+AGG + chr1_4:15035607-15035626 Msa0152420:CDS 25.0%
! AAAAACTTCACCATATTCTA+GGG - chr1_4:15035668-15035687 None:intergenic 25.0%
!! ATCATCTTCACTTCTTTTAA+CGG + chr1_4:15035993-15036012 Msa0152420:intron 25.0%
! AAACCATACATAAAGCTAAA+AGG - chr1_4:15036472-15036491 None:intergenic 25.0%
! ACTAAAAGATTTATACCATG+TGG - chr1_4:15036618-15036637 None:intergenic 25.0%
!! TCAGTTAAGTATGAATCTTT+TGG - chr1_4:15036727-15036746 None:intergenic 25.0%
! AAGTTAATAACATGGTTTCA+TGG + chr1_4:15036780-15036799 Msa0152420:intron 25.0%
!!! ACATTCTTTGATTTGTAGAT+AGG - chr1_4:15037045-15037064 None:intergenic 25.0%
!!! AAACTTTTTAGGGAAATTCA+AGG + chr1_4:15037072-15037091 Msa0152420:CDS 25.0%
!! AATTCAAGGTATTTCAACAA+AGG + chr1_4:15037086-15037105 Msa0152420:CDS 25.0%
! AACAAATTATGACTACAAGT+TGG + chr1_4:15037215-15037234 Msa0152420:CDS 25.0%
! ACAAATTATGACTACAAGTT+GGG + chr1_4:15037216-15037235 Msa0152420:CDS 25.0%
!! TTTTCATAATATTCCCACTT+AGG - chr1_4:15037284-15037303 None:intergenic 25.0%
CTCTCTCTTGAACAAATTTA+AGG - chr1_4:15032897-15032916 None:intergenic 30.0%
TTTCTTCTCCTATCCTATTT+AGG + chr1_4:15033056-15033075 Msa0152420:CDS 30.0%
TCTACAAATCTCTTTACATC+AGG - chr1_4:15033161-15033180 None:intergenic 30.0%
GTTGCTATAAAGATAAGAGA+AGG + chr1_4:15033206-15033225 Msa0152420:CDS 30.0%
! CATTTCCCGAACTTTTAAAT+AGG - chr1_4:15033345-15033364 None:intergenic 30.0%
CTATTTAAAAGTTCGGGAAA+TGG + chr1_4:15033343-15033362 Msa0152420:CDS 30.0%
! ATTATCTGTTTTATGGAGAG+AGG + chr1_4:15033454-15033473 Msa0152420:CDS 30.0%
!! GAGAATGTTAGAGTTGATTT+TGG + chr1_4:15033476-15033495 Msa0152420:CDS 30.0%
AGCTTTCATACGAGAATATT+TGG + chr1_4:15033558-15033577 Msa0152420:CDS 30.0%
ATGCATTAAATGCAACAAAC+AGG - chr1_4:15033722-15033741 None:intergenic 30.0%
!! ATCTCAAGAACATTGGTTTA+TGG + chr1_4:15033799-15033818 Msa0152420:intron 30.0%
CTCTTCTGTTTGTAGTTAAT+TGG + chr1_4:15034002-15034021 Msa0152420:intron 30.0%
AATGGAATTTGAATTCCTTG+AGG - chr1_4:15034329-15034348 None:intergenic 30.0%
CTGACTATATCTTTGGATAA+CGG + chr1_4:15034575-15034594 Msa0152420:CDS 30.0%
! TATATCTTTGGATAACGGTT+TGG + chr1_4:15034580-15034599 Msa0152420:CDS 30.0%
ATTCTTTCCATCCTTAGAAA+TGG + chr1_4:15034812-15034831 Msa0152420:CDS 30.0%
! CAATAACTATGCCATTTCTA+AGG - chr1_4:15034826-15034845 None:intergenic 30.0%
CTTAGAAATGGCATAGTTAT+TGG + chr1_4:15034824-15034843 Msa0152420:CDS 30.0%
GAAAGAAATGGTTCAACATT+AGG - chr1_4:15035535-15035554 None:intergenic 30.0%
CAAAAACTTCACCATATTCT+AGG - chr1_4:15035669-15035688 None:intergenic 30.0%
AGTCTTTCTCATGTAGTTAA+TGG + chr1_4:15035715-15035734 Msa0152420:CDS 30.0%
TTCTCATGTAGTTAATGGTA+AGG + chr1_4:15035720-15035739 Msa0152420:CDS 30.0%
GAAGTGAAGATGATCAAAAT+AGG - chr1_4:15035987-15036006 None:intergenic 30.0%
! TGGATGAGTTTTTCTTCAAT+GGG - chr1_4:15036137-15036156 None:intergenic 30.0%
!! ATATTTTAAGCCTACTTCTC+TGG - chr1_4:15036157-15036176 None:intergenic 30.0%
!!! TAGAATGTTATTTTGGCAAG+TGG + chr1_4:15036204-15036223 Msa0152420:intron 30.0%
ATGATCCAATACAATAGGTT+TGG - chr1_4:15036427-15036446 None:intergenic 30.0%
ACATCATGATCCAATACAAT+AGG - chr1_4:15036432-15036451 None:intergenic 30.0%
TATTGTATTGGATCATGATG+TGG + chr1_4:15036431-15036450 Msa0152420:CDS 30.0%
!!! TGTCCTTTTAGCTTTATGTA+TGG + chr1_4:15036466-15036485 Msa0152420:intron 30.0%
!! TCTTTTAGTTATTACCCCTT+TGG + chr1_4:15036629-15036648 Msa0152420:intron 30.0%
ATATTAGAATGCATGTTGCA+GGG - chr1_4:15036760-15036779 None:intergenic 30.0%
TATATTAGAATGCATGTTGC+AGG - chr1_4:15036761-15036780 None:intergenic 30.0%
ACAATCGTTGAGTATGTAAT+TGG - chr1_4:15036830-15036849 None:intergenic 30.0%
ATGAAATCTGGATATTCTGT+GGG - chr1_4:15037006-15037025 None:intergenic 30.0%
! GATTTGTAGATAGGTTTGTT+AGG - chr1_4:15037036-15037055 None:intergenic 30.0%
GAAATCTTTCACCAAAAGAA+GGG + chr1_4:15037308-15037327 Msa0152420:CDS 30.0%
ACTTACCATCATAGTTACTA+TGG + chr1_4:15037450-15037469 Msa0152420:CDS 30.0%
! TGTACAATGAAGGTATGAAA+AGG + chr1_4:15037475-15037494 Msa0152420:CDS 30.0%
! GTACAATGAAGGTATGAAAA+GGG + chr1_4:15037476-15037495 Msa0152420:CDS 30.0%
GCTTATGAACTTTCACTACT+TGG + chr1_4:15032926-15032945 Msa0152420:five_prime_UTR 35.0%
TGAACTTTCACTACTTGGAT+TGG + chr1_4:15032931-15032950 Msa0152420:five_prime_UTR 35.0%
! AAAAGAGTTGGCATTGAAGA+TGG + chr1_4:15033085-15033104 Msa0152420:CDS 35.0%
AAATCTCTTTACATCAGGCA+CGG - chr1_4:15033156-15033175 None:intergenic 35.0%
AGATTTGTAGAGCAGTATAC+TGG + chr1_4:15033170-15033189 Msa0152420:CDS 35.0%
TAGCAAATGCTGTTCGAATA+CGG - chr1_4:15033238-15033257 None:intergenic 35.0%
GGAGCTCCTATTTAAAAGTT+CGG + chr1_4:15033336-15033355 Msa0152420:CDS 35.0%
GAGCTCCTATTTAAAAGTTC+GGG + chr1_4:15033337-15033356 Msa0152420:CDS 35.0%
TGGAAAGAGATATTGTTCCA+AGG + chr1_4:15033363-15033382 Msa0152420:CDS 35.0%
AAACTGTGCAAAAATTCCCT+TGG - chr1_4:15033389-15033408 None:intergenic 35.0%
! AAGGGAATTTTTGCACAGTT+TGG + chr1_4:15033388-15033407 Msa0152420:CDS 35.0%
! ATTTTTGCACAGTTTGGATG+AGG + chr1_4:15033394-15033413 Msa0152420:CDS 35.0%
! GATGAGGTGAAACTGTATTT+TGG + chr1_4:15033410-15033429 Msa0152420:CDS 35.0%
!!! GTTAGAGTTGATTTTGGGAT+TGG + chr1_4:15033482-15033501 Msa0152420:CDS 35.0%
TTGGGATTGGAATGAAAAAG+TGG + chr1_4:15033495-15033514 Msa0152420:CDS 35.0%
! GTTTGAACGTCTTATTGTCA+TGG - chr1_4:15033535-15033554 None:intergenic 35.0%
TTCTTGAGATCACTAAGCTT+GGG - chr1_4:15033789-15033808 None:intergenic 35.0%
CTTAGTGATCTCAAGAACAT+TGG + chr1_4:15033792-15033811 Msa0152420:intron 35.0%
CTTACTGAACATGAGATGAA+AGG - chr1_4:15033921-15033940 None:intergenic 35.0%
ATGGAGTGAAATCTACTGTA+CGG - chr1_4:15034136-15034155 None:intergenic 35.0%
! CAGAGATTTTCCGAATTTCA+GGG + chr1_4:15034205-15034224 Msa0152420:CDS 35.0%
! GCAAAGTTTTCCCTGAAATT+CGG - chr1_4:15034218-15034237 None:intergenic 35.0%
! ATCACCTTTTTCTTGCAATC+CGG + chr1_4:15034280-15034299 Msa0152420:CDS 35.0%
!! GTTAATTCATTGGTTCAGCA+CGG + chr1_4:15034365-15034384 Msa0152420:CDS 35.0%
!! TTAATTCATTGGTTCAGCAC+GGG + chr1_4:15034366-15034385 Msa0152420:CDS 35.0%
! AGCTCAACATTCTTTCTAGT+TGG - chr1_4:15034440-15034459 None:intergenic 35.0%
!! GAGGTGGATTATTTGAACTA+CGG - chr1_4:15034550-15034569 None:intergenic 35.0%
GTAGTTCAAATAATCCACCT+CGG + chr1_4:15034549-15034568 Msa0152420:CDS 35.0%
! CCACAAAAGTATACTTTGCA+AGG - chr1_4:15034632-15034651 None:intergenic 35.0%
! CCTTGCAAAGTATACTTTTG+TGG + chr1_4:15034629-15034648 Msa0152420:CDS 35.0%
TTTATCTTCACGTATTTCCG+TGG + chr1_4:15034763-15034782 Msa0152420:CDS 35.0%
TTATCTTCACGTATTTCCGT+GGG + chr1_4:15034764-15034783 Msa0152420:CDS 35.0%
! AACTATGCCATTTCTAAGGA+TGG - chr1_4:15034822-15034841 None:intergenic 35.0%
ACCAAATATGTCTTCTCTGA+TGG + chr1_4:15035091-15035110 Msa0152420:CDS 35.0%
TCCATCAGAGAAGACATATT+TGG - chr1_4:15035095-15035114 None:intergenic 35.0%
TATGTCTTCTCTGATGGAAT+TGG + chr1_4:15035097-15035116 Msa0152420:CDS 35.0%
ATGTCTTCTCTGATGGAATT+GGG + chr1_4:15035098-15035117 Msa0152420:CDS 35.0%
AAATATCTCTTGAACTTGCC+AGG + chr1_4:15035122-15035141 Msa0152420:CDS 35.0%
! CAACACAGATTTGGATGTTT+TGG + chr1_4:15035288-15035307 Msa0152420:CDS 35.0%
! TTTTGGCATGTAGTAAGTTC+CGG + chr1_4:15035305-15035324 Msa0152420:CDS 35.0%
!! AACTGTCGATTCAGATAACA+AGG - chr1_4:15035331-15035350 None:intergenic 35.0%
AATACTAACAGATTCGACGA+AGG + chr1_4:15035432-15035451 Msa0152420:CDS 35.0%
CTGAAAGAGATGCTTATTTG+TGG + chr1_4:15035502-15035521 Msa0152420:CDS 35.0%
TGCAGCATCATTGAAAGAAA+TGG - chr1_4:15035547-15035566 None:intergenic 35.0%
AATGATGCTGCAGACATTTA+GGG + chr1_4:15035555-15035574 Msa0152420:CDS 35.0%
!! ATTTAGGGCCTCAAAACTTT+TGG + chr1_4:15035570-15035589 Msa0152420:CDS 35.0%
GAAACTAGAACCCTAGAATA+TGG + chr1_4:15035655-15035674 Msa0152420:CDS 35.0%
AAACAACACAATCCACCATA+TGG - chr1_4:15035822-15035841 None:intergenic 35.0%
!!! TGTGTTGTTTTCCCTCAAAA+AGG + chr1_4:15035832-15035851 Msa0152420:CDS 35.0%
! CTGGATGAGTTTTTCTTCAA+TGG - chr1_4:15036138-15036157 None:intergenic 35.0%
AAAAACTCATCCAGAGAAGT+AGG + chr1_4:15036144-15036163 Msa0152420:intron 35.0%
ACCACATCCAAATGAATGTT+CGG + chr1_4:15036311-15036330 Msa0152420:CDS 35.0%
TTCTGCCAAACCTATTGTAT+TGG + chr1_4:15036419-15036438 Msa0152420:CDS 35.0%
GAGCAATAATTGTTTCAGCT+AGG + chr1_4:15036683-15036702 Msa0152420:intron 35.0%
TTTCAGCTAGGATTCAAACT+CGG + chr1_4:15036695-15036714 Msa0152420:intron 35.0%
TACATACTCAACGATTGTCT+TGG + chr1_4:15036832-15036851 Msa0152420:CDS 35.0%
TGAAATCTGGATATTCTGTG+GGG - chr1_4:15037005-15037024 None:intergenic 35.0%
CATGAAATCTGGATATTCTG+TGG - chr1_4:15037007-15037026 None:intergenic 35.0%
CACAGAATATCCAGATTTCA+TGG + chr1_4:15037005-15037024 Msa0152420:CDS 35.0%
! TTAGGCTTTTCCATGAAATC+TGG - chr1_4:15037018-15037037 None:intergenic 35.0%
! CAAGGTATTTCAACAAAGGA+CGG + chr1_4:15037090-15037109 Msa0152420:CDS 35.0%
CTCTATTACATCCTTCACAT+TGG + chr1_4:15037113-15037132 Msa0152420:CDS 35.0%
ACTGAATCAGAAATCCTAAG+TGG + chr1_4:15037267-15037286 Msa0152420:CDS 35.0%
CTGAATCAGAAATCCTAAGT+GGG + chr1_4:15037268-15037287 Msa0152420:CDS 35.0%
CGAAATCTTTCACCAAAAGA+AGG + chr1_4:15037307-15037326 Msa0152420:CDS 35.0%
ATGCAATTACTATGGCTGTA+AGG + chr1_4:15037337-15037356 Msa0152420:CDS 35.0%
ACACACCATAGTAACTATGA+TGG - chr1_4:15037458-15037477 None:intergenic 35.0%
TACTATGGTGTGTACAATGA+AGG + chr1_4:15037465-15037484 Msa0152420:CDS 35.0%
! ACCATTTTCTAAGCTTTCCA+TGG + chr1_4:15037499-15037518 Msa0152420:CDS 35.0%
ACCATGGAAAGCTTAGAAAA+TGG - chr1_4:15037503-15037522 None:intergenic 35.0%
!! TCTTGATTTGGACAAGCAAA+TGG - chr1_4:15037533-15037552 None:intergenic 35.0%
TTTGCTTGTCCAAATCAAGA+AGG + chr1_4:15037533-15037552 Msa0152420:CDS 35.0%
AGCAAATGCTGTTCGAATAC+GGG - chr1_4:15033237-15033256 None:intergenic 40.0%
AGATATTGTTCCAAGGCCAA+GGG + chr1_4:15033370-15033389 Msa0152420:CDS 40.0%
!! TACTTTGTAGTTTTACCCCG+TGG - chr1_4:15033602-15033621 None:intergenic 40.0%
GTTCTTGAGATCACTAAGCT+TGG - chr1_4:15033790-15033809 None:intergenic 40.0%
TCATATGTGATGTGCAGCAA+AGG - chr1_4:15033966-15033985 None:intergenic 40.0%
! TGTAGTTAATTGGTGCTCCT+CGG + chr1_4:15034012-15034031 Msa0152420:intron 40.0%
GAATAAAGCTCAAAAACCCG+AGG - chr1_4:15034032-15034051 None:intergenic 40.0%
AATCTACTGTACGGATCCAT+TGG - chr1_4:15034127-15034146 None:intergenic 40.0%
TTCACTCCATGCACTTGTAT+TGG + chr1_4:15034146-15034165 Msa0152420:CDS 40.0%
TCACTCCATGCACTTGTATT+GGG + chr1_4:15034147-15034166 Msa0152420:CDS 40.0%
! GCAGAGATTTTCCGAATTTC+AGG + chr1_4:15034204-15034223 Msa0152420:CDS 40.0%
GGAAAACTTTGCTCATTACG+AGG + chr1_4:15034226-15034245 Msa0152420:CDS 40.0%
ACATCCGGATTGCAAGAAAA+AGG - chr1_4:15034287-15034306 None:intergenic 40.0%
GGAATTTGAATTCCTTGAGG+AGG - chr1_4:15034326-15034345 None:intergenic 40.0%
TCTGTTATGAACCCGTGAAA+TGG + chr1_4:15034501-15034520 Msa0152420:CDS 40.0%
TGATCTTTCAGCCATTTCAC+GGG - chr1_4:15034515-15034534 None:intergenic 40.0%
CTGATCTTTCAGCCATTTCA+CGG - chr1_4:15034516-15034535 None:intergenic 40.0%
AAAGATATAGTCAGTGACCG+AGG - chr1_4:15034569-15034588 None:intergenic 40.0%
! TCGGTCACTGACTATATCTT+TGG + chr1_4:15034568-15034587 Msa0152420:CDS 40.0%
!! ACGGTTTGGTATATGTTTGC+AGG + chr1_4:15034594-15034613 Msa0152420:CDS 40.0%
!! CGGTTTGGTATATGTTTGCA+GGG + chr1_4:15034595-15034614 Msa0152420:CDS 40.0%
! CGATTTGAGACATTGATCTC+TGG - chr1_4:15034656-15034675 None:intergenic 40.0%
TATATCAGTTCTTCCACCCA+CGG - chr1_4:15034783-15034802 None:intergenic 40.0%
GCTAAATATGCTGCTAGACT+TGG + chr1_4:15034989-15035008 Msa0152420:CDS 40.0%
! GCTAGACTTGGACAATCTTT+TGG + chr1_4:15035001-15035020 Msa0152420:CDS 40.0%
TTCCTCTACCGAAACTACAA+CGG + chr1_4:15035024-15035043 Msa0152420:CDS 40.0%
!!! ACATTTTTTAGCCACTCTCC+TGG - chr1_4:15035143-15035162 None:intergenic 40.0%
AGGAGAGTGGCTAAAAAATG+TGG + chr1_4:15035142-15035161 Msa0152420:CDS 40.0%
GACAACTTTACCGATGATGT+TGG - chr1_4:15035235-15035254 None:intergenic 40.0%
CGATTCAGACAACACAGATT+TGG + chr1_4:15035279-15035298 Msa0152420:CDS 40.0%
CTTATCCACTCTTGATGTCA+AGG + chr1_4:15035360-15035379 Msa0152420:CDS 40.0%
!! GTTTTGGACTTGATGTCTTC+CGG + chr1_4:15035463-15035482 Msa0152420:CDS 40.0%
! TTTTGGACTTGATGTCTTCC+GGG + chr1_4:15035464-15035483 Msa0152420:CDS 40.0%
CAATGATGCTGCAGACATTT+AGG + chr1_4:15035554-15035573 Msa0152420:CDS 40.0%
!!! CCTCAAAACTTTTGGAACTG+CGG + chr1_4:15035578-15035597 Msa0152420:CDS 40.0%
TCCAAAAGGAAGAGCAATGA+TGG + chr1_4:15035621-15035640 Msa0152420:CDS 40.0%
CCAAAAGGAAGAGCAATGAT+GGG + chr1_4:15035622-15035641 Msa0152420:CDS 40.0%
TCAAAACACGAACATCACCT+GGG - chr1_4:15035774-15035793 None:intergenic 40.0%
TTCAAAACACGAACATCACC+TGG - chr1_4:15035775-15035794 None:intergenic 40.0%
!! AGGTGATGTTCGTGTTTTGA+AGG + chr1_4:15035774-15035793 Msa0152420:CDS 40.0%
! TTTTCCCTCAAAAAGGTCAC+AGG + chr1_4:15035839-15035858 Msa0152420:CDS 40.0%
! TCTACCTGTGACCTTTTTGA+GGG - chr1_4:15035846-15035865 None:intergenic 40.0%
! ATCTACCTGTGACCTTTTTG+AGG - chr1_4:15035847-15035866 None:intergenic 40.0%
ACATTCATTTGGATGTGGTC+TGG - chr1_4:15036310-15036329 None:intergenic 40.0%
CCACATCCAAATGAATGTTC+GGG + chr1_4:15036312-15036331 Msa0152420:CDS 40.0%
TCACTTCCCGAACATTCATT+TGG - chr1_4:15036321-15036340 None:intergenic 40.0%
! GGACATCTACTTTGTTTGCT+GGG + chr1_4:15036350-15036369 Msa0152420:CDS 40.0%
ATTGGATCAATTGTTCGAGG+TGG - chr1_4:15036390-15036409 None:intergenic 40.0%
ACCTCGAACAATTGATCCAA+TGG + chr1_4:15036389-15036408 Msa0152420:CDS 40.0%
TCCATTGGATCAATTGTTCG+AGG - chr1_4:15036393-15036412 None:intergenic 40.0%
TTGGCAGAATCATACTCCAT+TGG - chr1_4:15036408-15036427 None:intergenic 40.0%
! TATTACCCCTTTGGTTTCTG+AGG + chr1_4:15036638-15036657 Msa0152420:intron 40.0%
! ATTACCCCTTTGGTTTCTGA+GGG + chr1_4:15036639-15036658 Msa0152420:intron 40.0%
! TTTTCCCTCAGAAACCAAAG+GGG - chr1_4:15036646-15036665 None:intergenic 40.0%
! CTTTTCCCTCAGAAACCAAA+GGG - chr1_4:15036647-15036666 None:intergenic 40.0%
! CTTTGGTTTCTGAGGGAAAA+GGG + chr1_4:15036646-15036665 Msa0152420:intron 40.0%
GAAAAGGGATTGTGGTAATC+TGG + chr1_4:15036661-15036680 Msa0152420:intron 40.0%
TTCAGCTAGGATTCAAACTC+GGG + chr1_4:15036696-15036715 Msa0152420:intron 40.0%
ATAACATGGTTTCATGGTGC+AGG + chr1_4:15036786-15036805 Msa0152420:intron 40.0%
AGGTTCTTTGTCTGCAAAGA+CGG - chr1_4:15036878-15036897 None:intergenic 40.0%
CAAAGAACCTGGAAAAGCAA+TGG + chr1_4:15036888-15036907 Msa0152420:CDS 40.0%
AGCTTTGCAAGTTCAACACA+TGG - chr1_4:15036919-15036938 None:intergenic 40.0%
! GCAGTTGACTTTCCAAAAAC+CGG + chr1_4:15036949-15036968 Msa0152420:CDS 40.0%
TACATCCTTCACATTGGAAG+TGG + chr1_4:15037119-15037138 Msa0152420:CDS 40.0%
TTTAGCCACTTCCAATGTGA+AGG - chr1_4:15037127-15037146 None:intergenic 40.0%
GAATTCCATGTCGGAATCAT+AGG - chr1_4:15037154-15037173 None:intergenic 40.0%
! CTACAAGTTGGGAAATCTGA+TGG + chr1_4:15037227-15037246 Msa0152420:CDS 40.0%
!! GGAAATCTGATGGACTACTA+TGG + chr1_4:15037237-15037256 Msa0152420:CDS 40.0%
GGATGCAGATGCAATTACTA+TGG + chr1_4:15037329-15037348 Msa0152420:CDS 40.0%
ACTCCTTGCTTCTTTCCTTA+GGG - chr1_4:15037364-15037383 None:intergenic 40.0%
AACTCCTTGCTTCTTTCCTT+AGG - chr1_4:15037365-15037384 None:intergenic 40.0%
TAAGGAAAGAAGCAAGGAGT+TGG + chr1_4:15037364-15037383 Msa0152420:CDS 40.0%
TGGTTCAATGAAGACGATAC+TGG + chr1_4:15037384-15037403 Msa0152420:CDS 40.0%
GGTTCAATGAAGACGATACT+GGG + chr1_4:15037385-15037404 Msa0152420:CDS 40.0%
CATATGCAAAAGCTTCTGCT+TGG + chr1_4:15037418-15037437 Msa0152420:CDS 40.0%
AGCAAATGGTAAACACACCA+TGG - chr1_4:15037519-15037538 None:intergenic 40.0%
AAATCAAGAAGGAGAAAGCC+CGG + chr1_4:15037544-15037563 Msa0152420:CDS 40.0%
GTAGAGCAGTATACTGGTGA+AGG + chr1_4:15033176-15033195 Msa0152420:CDS 45.0%
CGACAAACTTCTGCTAGGTA+AGG - chr1_4:15033303-15033322 None:intergenic 45.0%
AATGGCGACAAACTTCTGCT+AGG - chr1_4:15033308-15033327 None:intergenic 45.0%
AGTTTGTCGCCATTGCAGTA+CGG + chr1_4:15033314-15033333 Msa0152420:CDS 45.0%
GAGATATTGTTCCAAGGCCA+AGG + chr1_4:15033369-15033388 Msa0152420:CDS 45.0%
TGCAAAAATTCCCTTGGCCT+TGG - chr1_4:15033383-15033402 None:intergenic 45.0%
! GTAGTTAATTGGTGCTCCTC+GGG + chr1_4:15034013-15034032 Msa0152420:intron 45.0%
TACGGATCCATTGGTCATCA+GGG - chr1_4:15034118-15034137 None:intergenic 45.0%
TTCGGAAAATCTCTGCTGCT+AGG - chr1_4:15034200-15034219 None:intergenic 45.0%
TGCTCATTACGAGGAAAGTG+CGG + chr1_4:15034235-15034254 Msa0152420:CDS 45.0%
GATCCACTCTCCAATGTGTA+TGG - chr1_4:15034263-15034282 None:intergenic 45.0%
! ACGTGTTTCGTTTGTTGACG+AGG + chr1_4:15034715-15034734 Msa0152420:CDS 45.0%
! TTCGTTTGTTGACGAGGAGT+TGG + chr1_4:15034721-15034740 Msa0152420:CDS 45.0%
AGTTGCGTGAAAGTTCGCTA+TGG + chr1_4:15034885-15034904 Msa0152420:CDS 45.0%
ATGTTTGCTCGTACACCAAC+TGG + chr1_4:15034908-15034927 Msa0152420:CDS 45.0%
AGATACCGCTGGATCCATAA+GGG + chr1_4:15034931-15034950 Msa0152420:CDS 45.0%
TGGATCCATAAGGGAATGGA+TGG + chr1_4:15034940-15034959 Msa0152420:CDS 45.0%
GGATCCATAAGGGAATGGAT+GGG + chr1_4:15034941-15034960 Msa0152420:CDS 45.0%
ATCTCCCATCCATTCCCTTA+TGG - chr1_4:15034948-15034967 None:intergenic 45.0%
GGCTGTTGATCCAACATCAT+CGG + chr1_4:15035222-15035241 Msa0152420:CDS 45.0%
CATCGGTAAAGTTGTCACTG+AGG + chr1_4:15035239-15035258 Msa0152420:CDS 45.0%
! GTCGATTCAGATAACAAGGC+CGG - chr1_4:15035327-15035346 None:intergenic 45.0%
ACTGTCCTTGACATCAAGAG+TGG - chr1_4:15035368-15035387 None:intergenic 45.0%
TTTGGACTTGATGTCTTCCG+GGG + chr1_4:15035465-15035484 Msa0152420:CDS 45.0%
CAGAATATTAGTGACCTCCC+CGG - chr1_4:15035485-15035504 None:intergenic 45.0%
! CCGCAGTTCCAAAAGTTTTG+AGG - chr1_4:15035581-15035600 None:intergenic 45.0%
TGGAACTGCGGCAAAAAACT+AGG + chr1_4:15035590-15035609 Msa0152420:CDS 45.0%
! CCCATCATTGCTCTTCCTTT+TGG - chr1_4:15035625-15035644 None:intergenic 45.0%
!!! TGTTCGTGTTTTGAAGGCTG+TGG + chr1_4:15035780-15035799 Msa0152420:CDS 45.0%
CCCGAACATTCATTTGGATG+TGG - chr1_4:15036315-15036334 None:intergenic 45.0%
TGTTCGGGAAGTGATCTTGA+TGG + chr1_4:15036327-15036346 Msa0152420:CDS 45.0%
GTTCGGGAAGTGATCTTGAT+GGG + chr1_4:15036328-15036347 Msa0152420:CDS 45.0%
TTCGGGAAGTGATCTTGATG+GGG + chr1_4:15036329-15036348 Msa0152420:CDS 45.0%
! GGGACATCTACTTTGTTTGC+TGG + chr1_4:15036349-15036368 Msa0152420:CDS 45.0%
GGATCATGATGTGGAGATTG+AGG + chr1_4:15036440-15036459 Msa0152420:CDS 45.0%
AAAGACTCATGCAAGCCACA+TGG + chr1_4:15036600-15036619 Msa0152420:intron 45.0%
! CCTTTTCCCTCAGAAACCAA+AGG - chr1_4:15036648-15036667 None:intergenic 45.0%
! CCTTTGGTTTCTGAGGGAAA+AGG + chr1_4:15036645-15036664 Msa0152420:intron 45.0%
! TTCTGAGGGAAAAGGGATTG+TGG + chr1_4:15036653-15036672 Msa0152420:intron 45.0%
GTCTTTGCAGACAAAGAACC+TGG + chr1_4:15036877-15036896 Msa0152420:CDS 45.0%
! AGGTATTTCTGCTGGGATAC+CGG - chr1_4:15036971-15036990 None:intergenic 45.0%
AGAGTCCTATGATTCCGACA+TGG + chr1_4:15037146-15037165 Msa0152420:CDS 45.0%
GATTCCGACATGGAATTCGA+CGG + chr1_4:15037156-15037175 Msa0152420:CDS 45.0%
AAAGCCGTCGAATTCCATGT+CGG - chr1_4:15037163-15037182 None:intergenic 45.0%
CATGGAATTCGACGGCTTTA+TGG + chr1_4:15037164-15037183 Msa0152420:CDS 45.0%
! TGCATCTGCATCCCTTCTTT+TGG - chr1_4:15037322-15037341 None:intergenic 45.0%
GGGCTTTCTCCTTCTTGATT+TGG - chr1_4:15037545-15037564 None:intergenic 45.0%
TCAGGCACGGTCACATAATG+AGG - chr1_4:15033143-15033162 None:intergenic 50.0%
GTATACTGGTGAAGGAAGCG+TGG + chr1_4:15033184-15033203 Msa0152420:CDS 50.0%
GTTTGTCGCCATTGCAGTAC+GGG + chr1_4:15033315-15033334 Msa0152420:CDS 50.0%
AGATTGAGCTGCATCAGCCA+CGG + chr1_4:15033582-15033601 Msa0152420:CDS 50.0%
TTGATCCCCCTGATGACCAA+TGG + chr1_4:15034108-15034127 Msa0152420:CDS 50.0%
ACGGATCCATTGGTCATCAG+GGG - chr1_4:15034117-15034136 None:intergenic 50.0%
GTACGGATCCATTGGTCATC+AGG - chr1_4:15034119-15034138 None:intergenic 50.0%
GACTGCCCAATACAAGTGCA+TGG - chr1_4:15034155-15034174 None:intergenic 50.0%
! GCTCATTACGAGGAAAGTGC+GGG + chr1_4:15034236-15034255 Msa0152420:CDS 50.0%
AAGTGCGGGTCCATACACAT+TGG + chr1_4:15034250-15034269 Msa0152420:CDS 50.0%
GGTCCATACACATTGGAGAG+TGG + chr1_4:15034257-15034276 Msa0152420:CDS 50.0%
GATATAGTCAGTGACCGAGG+TGG - chr1_4:15034566-15034585 None:intergenic 50.0%
TCTTCACGTATTTCCGTGGG+TGG + chr1_4:15034767-15034786 Msa0152420:CDS 50.0%
GAGATACCGCTGGATCCATA+AGG + chr1_4:15034930-15034949 Msa0152420:CDS 50.0%
CCATTCCCTTATGGATCCAG+CGG - chr1_4:15034939-15034958 None:intergenic 50.0%
GACCGTTGTAGTTTCGGTAG+AGG - chr1_4:15035029-15035048 None:intergenic 50.0%
GCTGCTGACCGTTGTAGTTT+CGG - chr1_4:15035035-15035054 None:intergenic 50.0%
TCTTGAACTTGCCAGGAGAG+TGG + chr1_4:15035129-15035148 Msa0152420:CDS 50.0%
TACCGAATCTGGAAGGCAGA+CGG - chr1_4:15035181-15035200 None:intergenic 50.0%
! TCTGCCTTCCAGATTCGGTA+TGG + chr1_4:15035181-15035200 Msa0152420:CDS 50.0%
!! ATTCGGTATGGCGGGTACAA+AGG + chr1_4:15035193-15035212 Msa0152420:CDS 50.0%
TGCAAAGACGGTGTGTGCAT+TGG - chr1_4:15036866-15036885 None:intergenic 50.0%
GAACCTGGAAAAGCAATGGC+AGG + chr1_4:15036892-15036911 Msa0152420:CDS 50.0%
!!! TCTGCTGGGATACCGGTTTT+TGG - chr1_4:15036964-15036983 None:intergenic 50.0%
! GACGACGAGGTATTTCTGCT+GGG - chr1_4:15036978-15036997 None:intergenic 50.0%
! AGACGACGAGGTATTTCTGC+TGG - chr1_4:15036979-15036998 None:intergenic 50.0%
CTATGGCTGTAAGGTCCCTA+AGG + chr1_4:15037346-15037365 Msa0152420:CDS 50.0%
GGTCCCTAAGGAAAGAAGCA+AGG + chr1_4:15037358-15037377 Msa0152420:CDS 50.0%
TGCTCGAATGCATCCTCATC+CGG - chr1_4:15037566-15037585 None:intergenic 50.0%
GATGAGGATGCATTCGAGCA+TGG + chr1_4:15037566-15037585 Msa0152420:CDS 50.0%
TGGAACAAAGCTTCAGTCGC+AGG + chr1_4:15037586-15037605 Msa0152420:CDS 50.0%
TAGGAGCTCCCGTACTGCAA+TGG - chr1_4:15033326-15033345 None:intergenic 55.0%
GATTGAGCTGCATCAGCCAC+GGG + chr1_4:15033583-15033602 Msa0152420:CDS 55.0%
ATTGAGCTGCATCAGCCACG+GGG + chr1_4:15033584-15033603 Msa0152420:CDS 55.0%
CGGATCCATTGGTCATCAGG+GGG - chr1_4:15034116-15034135 None:intergenic 55.0%
CAATCCGGATGTTGTCCCCA+TGG + chr1_4:15034295-15034314 Msa0152420:CDS 55.0%
GCAACCATGGGGACAACATC+CGG - chr1_4:15034302-15034321 None:intergenic 55.0%
CTTGAGGAGGAGCAACCATG+GGG - chr1_4:15034313-15034332 None:intergenic 55.0%
CCTTGAGGAGGAGCAACCAT+GGG - chr1_4:15034314-15034333 None:intergenic 55.0%
TCCTTGAGGAGGAGCAACCA+TGG - chr1_4:15034315-15034334 None:intergenic 55.0%
GTTCAGCACGGGTGTCTTTC+AGG + chr1_4:15034377-15034396 Msa0152420:CDS 55.0%
ACACCAACTGGAGATACCGC+TGG + chr1_4:15034920-15034939 Msa0152420:CDS 55.0%
GATCCAGCGGTATCTCCAGT+TGG - chr1_4:15034926-15034945 None:intergenic 55.0%
CCGCTGGATCCATAAGGGAA+TGG + chr1_4:15034936-15034955 Msa0152420:CDS 55.0%
TGCCGTCTGCCTTCCAGATT+CGG + chr1_4:15035176-15035195 Msa0152420:CDS 55.0%
! GCCTTCCAGATTCGGTATGG+CGG + chr1_4:15035184-15035203 Msa0152420:CDS 55.0%
! CCTTCCAGATTCGGTATGGC+GGG + chr1_4:15035185-15035204 Msa0152420:CDS 55.0%
TGTACCCGCCATACCGAATC+TGG - chr1_4:15035192-15035211 None:intergenic 55.0%
! TGGCGGGTACAAAGGAGTTG+TGG + chr1_4:15035201-15035220 Msa0152420:CDS 55.0%
AAAAACCCGTGCTTGCACCC+AGG + chr1_4:15035754-15035773 Msa0152420:CDS 55.0%
ACATCACCTGGGTGCAAGCA+CGG - chr1_4:15035763-15035782 None:intergenic 55.0%
TGTGCCAGCTTTGCGCCATA+TGG + chr1_4:15035804-15035823 Msa0152420:CDS 55.0%
TCCACCATATGGCGCAAAGC+TGG - chr1_4:15035811-15035830 None:intergenic 55.0%
!! GGACCTGCCATTGCTTTTCC+AGG - chr1_4:15036898-15036917 None:intergenic 55.0%
TCTGTGGGGATAAGACGACG+AGG - chr1_4:15036991-15037010 None:intergenic 55.0%
AGAAGGAGAAAGCCCGGATG+AGG + chr1_4:15037550-15037569 Msa0152420:CDS 55.0%
GCTCGAATGCATCCTCATCC+GGG - chr1_4:15037565-15037584 None:intergenic 55.0%
CCCATGGTTGCTCCTCCTCA+AGG + chr1_4:15034311-15034330 Msa0152420:CDS 60.0%
CCCGCCATACCGAATCTGGA+AGG - chr1_4:15035188-15035207 None:intergenic 60.0%
! AGATTCGACGAAGGCACGCG+AGG + chr1_4:15035441-15035460 Msa0152420:CDS 60.0%
!! GACGAAGGCACGCGAGGTTT+TGG + chr1_4:15035447-15035466 Msa0152420:CDS 60.0%
GGACTTGATGTCTTCCGGGG+AGG + chr1_4:15035468-15035487 Msa0152420:CDS 60.0%
CATCACCTGGGTGCAAGCAC+GGG - chr1_4:15035762-15035781 None:intergenic 60.0%
GCCAGCTTTGCGCCATATGG+TGG + chr1_4:15035807-15035826 Msa0152420:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 15032870 15037623 15032870 ID=Msa0152420;Name=Msa0152420
chr1_4 mRNA 15032870 15037623 15032870 ID=Msa0152420-mRNA-1;Parent=Msa0152420;Name=Msa0152420-mRNA-1;_AED=0.35;_eAED=0.35;_QI=135|0.33|0.25|0.5|1|1|4|0|1146
chr1_4 exon 15032870 15033634 15032870 ID=Msa0152420-mRNA-1:exon:5920;Parent=Msa0152420-mRNA-1
chr1_4 exon 15034017 15035860 15034017 ID=Msa0152420-mRNA-1:exon:5921;Parent=Msa0152420-mRNA-1
chr1_4 exon 15036311 15036461 15036311 ID=Msa0152420-mRNA-1:exon:5922;Parent=Msa0152420-mRNA-1
chr1_4 exon 15036808 15037623 15036808 ID=Msa0152420-mRNA-1:exon:5923;Parent=Msa0152420-mRNA-1
chr1_4 five_prime_UTR 15032870 15033004 15032870 ID=Msa0152420-mRNA-1:five_prime_utr;Parent=Msa0152420-mRNA-1
chr1_4 CDS 15033005 15033634 15033005 ID=Msa0152420-mRNA-1:cds;Parent=Msa0152420-mRNA-1
chr1_4 CDS 15034017 15035860 15034017 ID=Msa0152420-mRNA-1:cds;Parent=Msa0152420-mRNA-1
chr1_4 CDS 15036311 15036461 15036311 ID=Msa0152420-mRNA-1:cds;Parent=Msa0152420-mRNA-1
chr1_4 CDS 15036808 15037623 15036808 ID=Msa0152420-mRNA-1:cds;Parent=Msa0152420-mRNA-1
Gene Sequence

>Msa0152420

ATGATTTTTTTGATGCAGAAGTTTAACAGTAACATTAATTTTTTGAATTATTTTCTTCTCCTATCCTATTTAGGAAAATCAAAAGAGTTGGCATTGAAGATGGTTAAAAGTAAAACAATTGAGTTGTATGGATTTCCTCATTATGTGACCGTGCCTGATGTAAAGAGATTTGTAGAGCAGTATACTGGTGAAGGAAGCGTGGTTGCTATAAAGATAAGAGAAGGCAAAGCCCGTATTCGAACAGCATTTGCTATTATTCAATTCACTACTAAAGATCATGCTACAGATATGATGACCTTACCTAGCAGAAGTTTGTCGCCATTGCAGTACGGGAGCTCCTATTTAAAAGTTCGGGAAATGGAAAGAGATATTGTTCCAAGGCCAAGGGAATTTTTGCACAGTTTGGATGAGGTGAAACTGTATTTTGGCTGTCAAATCTCAAAGAAAAGATTATCTGTTTTATGGAGAGAGGAGAATGTTAGAGTTGATTTTGGGATTGGAATGAAAAAGTGGCGATTCTCTTTGTGCCATGACAATAAGACGTTCAAACTTGAGCTTTCATACGAGAATATTTGGAAGATTGAGCTGCATCAGCCACGGGGTAAAACTACAAAGTATCTATTGATTCAGTTAATTGGTGCTCCTCGGGTTTTTGAGCTTTATTCTCATACTTCAGATGATGCATATAACATATACGAAGATCCTTTTAAGAACTATTTTATTGATCCCCCTGATGACCAATGGATCCGTACAGTAGATTTCACTCCATGCACTTGTATTGGGCAGTCTTCTGCTTTATGTCTAGAGCTTCCTAGCAGCAGAGATTTTCCGAATTTCAGGGAAAACTTTGCTCATTACGAGGAAAGTGCGGGTCCATACACATTGGAGAGTGGATCACCTTTTTCTTGCAATCCGGATGTTGTCCCCATGGTTGCTCCTCCTCAAGGAATTCAAATTCCATTTGACATCTTGTTTAAAGTTAATTCATTGGTTCAGCACGGGTGTCTTTCAGGTTCTGAACTCGATAATGCTTTCTATCATCTAGTTGATCCAACTAGAAAGAATGTTGAGCTTATTGAGAATGCTTTAGAAAAGATGTACTATTCAAAGGATTTCTGTTATGAACCCGTGAAATGGCTGAAAGATCAGTACGAAATGTACCGTAGTTCAAATAATCCACCTCGGTCACTGACTATATCTTTGGATAACGGTTTGGTATATGTTTGCAGGGCACAGATAACACCTTGCAAAGTATACTTTTGTGGTCCAGAGATCAATGTCTCAAATCGTGTTCTGCGTAAATACAAAAAATATATGGATAACTTTCTACGTGTTTCGTTTGTTGACGAGGAGTTGGATAAACTGTATTCGTCAGATTTATCTTCACGTATTTCCGTGGGTGGAAGAACTGATATATACTATAGAATTCTTTCCATCCTTAGAAATGGCATAGTTATTGGTGATAAGAAGTTTGAATTTCTAGCTTTCTCATCAAGTCAGTTGCGTGAAAGTTCGCTATGGATGTTTGCTCGTACACCAACTGGAGATACCGCTGGATCCATAAGGGAATGGATGGGAGATTTTAGCCGCATAAAAAATGTAGCTAAATATGCTGCTAGACTTGGACAATCTTTTGGTTCCTCTACCGAAACTACAACGGTCAGCAGCACTGAAATTGAAATTATTCTTGATGTACATAATAAAACCAAATATGTCTTCTCTGATGGAATTGGGAAAATATCTCTTGAACTTGCCAGGAGAGTGGCTAAAAAATGTGGTTATGATTCTATGCCGTCTGCCTTCCAGATTCGGTATGGCGGGTACAAAGGAGTTGTGGCTGTTGATCCAACATCATCGGTAAAGTTGTCACTGAGGATGAGCATGCTCAAGTACGATTCAGACAACACAGATTTGGATGTTTTGGCATGTAGTAAGTTCCGGCCTTGTTATCTGAATCGACAGTTGATTTCTCTCTTATCCACTCTTGATGTCAAGGACAGTGTTTTCGAGAAAAAACAAAAAGAAGCTGTTGATCAACTGAACACAATACTAACAGATTCGACGAAGGCACGCGAGGTTTTGGACTTGATGTCTTCCGGGGAGGTCACTAATATTCTGAAAGAGATGCTTATTTGTGGTTACAAGCCTAATGTTGAACCATTTCTTTCAATGATGCTGCAGACATTTAGGGCCTCAAAACTTTTGGAACTGCGGCAAAAAACTAGGATATTTATTCCAAAAGGAAGAGCAATGATGGGAGTTCTAGATGAAACTAGAACCCTAGAATATGGTGAAGTTTTTGTTCAATATTCTAACAATAGGGAAGACAGTCTTTCTCATGTAGTTAATGGTAAGGTTGTTGTAGCGAAAAACCCGTGCTTGCACCCAGGTGATGTTCGTGTTTTGAAGGCTGTGGATGTGCCAGCTTTGCGCCATATGGTGGATTGTGTTGTTTTCCCTCAAAAAGGTCACAGACCACATCCAAATGAATGTTCGGGAAGTGATCTTGATGGGGACATCTACTTTGTTTGCTGGGATTCTGAATTGATTCCACCTCGAACAATTGATCCAATGGAGTATGATTCTGCCAAACCTATTGTATTGGATCATGATGTGGAGATTGAGGAAGTGCAGCAGTATTTTACCAATTACATACTCAACGATTGTCTTGGAATAATTGCCAATGCACACACCGTCTTTGCAGACAAAGAACCTGGAAAAGCAATGGCAGGTCCATGTGTTGAACTTGCAAAGCTGTTCTCAACAGCAGTTGACTTTCCAAAAACCGGTATCCCAGCAGAAATACCTCGTCGTCTTATCCCCACAGAATATCCAGATTTCATGGAAAAGCCTAACAAACCTATCTACAAATCAAAGAATGTAATAGGAAAACTTTTTAGGGAAATTCAAGGTATTTCAACAAAGGACGGCTCTATTACATCCTTCACATTGGAAGTGGCTAAAGAGTCCTATGATTCCGACATGGAATTCGACGGCTTTATGGATTATGTTGATGATGCCTTCTATCACAAAACAAATTATGACTACAAGTTGGGAAATCTGATGGACTACTATGGTATCAAAACTGAATCAGAAATCCTAAGTGGGAATATTATGAAAATGTCGAAATCTTTCACCAAAAGAAGGGATGCAGATGCAATTACTATGGCTGTAAGGTCCCTAAGGAAAGAAGCAAGGAGTTGGTTCAATGAAGACGATACTGGGAGTGATGATGCATATGCAAAAGCTTCTGCTTGGTACTATGTTACTTACCATCATAGTTACTATGGTGTGTACAATGAAGGTATGAAAAGGGACCATTTTCTAAGCTTTCCATGGTGTGTTTACCATTTGCTTGTCCAAATCAAGAAGGAGAAAGCCCGGATGAGGATGCATTCGAGCATGGAACAAAGCTTCAGTCGCAGGTTGCGTCTTGACTGA
Protein sequence

>Msa0152420

MIFLMQKFNSNINFLNYFLLLSYLGKSKELALKMVKSKTIELYGFPHYVTVPDVKRFVEQYTGEGSVVAIKIREGKARIRTAFAIIQFTTKDHATDMMTLPSRSLSPLQYGSSYLKVREMERDIVPRPREFLHSLDEVKLYFGCQISKKRLSVLWREENVRVDFGIGMKKWRFSLCHDNKTFKLELSYENIWKIELHQPRGKTTKYLLIQLIGAPRVFELYSHTSDDAYNIYEDPFKNYFIDPPDDQWIRTVDFTPCTCIGQSSALCLELPSSRDFPNFRENFAHYEESAGPYTLESGSPFSCNPDVVPMVAPPQGIQIPFDILFKVNSLVQHGCLSGSELDNAFYHLVDPTRKNVELIENALEKMYYSKDFCYEPVKWLKDQYEMYRSSNNPPRSLTISLDNGLVYVCRAQITPCKVYFCGPEINVSNRVLRKYKKYMDNFLRVSFVDEELDKLYSSDLSSRISVGGRTDIYYRILSILRNGIVIGDKKFEFLAFSSSQLRESSLWMFARTPTGDTAGSIREWMGDFSRIKNVAKYAARLGQSFGSSTETTTVSSTEIEIILDVHNKTKYVFSDGIGKISLELARRVAKKCGYDSMPSAFQIRYGGYKGVVAVDPTSSVKLSLRMSMLKYDSDNTDLDVLACSKFRPCYLNRQLISLLSTLDVKDSVFEKKQKEAVDQLNTILTDSTKAREVLDLMSSGEVTNILKEMLICGYKPNVEPFLSMMLQTFRASKLLELRQKTRIFIPKGRAMMGVLDETRTLEYGEVFVQYSNNREDSLSHVVNGKVVVAKNPCLHPGDVRVLKAVDVPALRHMVDCVVFPQKGHRPHPNECSGSDLDGDIYFVCWDSELIPPRTIDPMEYDSAKPIVLDHDVEIEEVQQYFTNYILNDCLGIIANAHTVFADKEPGKAMAGPCVELAKLFSTAVDFPKTGIPAEIPRRLIPTEYPDFMEKPNKPIYKSKNVIGKLFREIQGISTKDGSITSFTLEVAKESYDSDMEFDGFMDYVDDAFYHKTNYDYKLGNLMDYYGIKTESEILSGNIMKMSKSFTKRRDADAITMAVRSLRKEARSWFNEDDTGSDDAYAKASAWYYVTYHHSYYGVYNEGMKRDHFLSFPWCVYHLLVQIKKEKARMRMHSSMEQSFSRRLRLD*