AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0063670

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0063670 MtrunA17_Chr1g0164371 96.444 478 17 0 1 478 1 478 0.0 962
Msa0063670 MtrunA17_Chr5g0408181 56.009 466 191 6 20 477 5 464 0.0 528
Msa0063670 MtrunA17_Chr4g0044851 56.600 447 190 3 29 472 21 466 0.0 520
Msa0063670 MtrunA17_Chr8g0369791 57.798 436 176 4 44 477 37 466 0.0 518
Msa0063670 MtrunA17_Chr4g0044841 56.250 448 191 4 29 472 22 468 2.43e-178 508
Msa0063670 MtrunA17_Chr1g0153371 52.677 467 213 5 12 472 1 465 2.49e-176 503
Msa0063670 MtrunA17_Chr7g0219961 32.548 467 296 9 18 474 4 461 8.77e-81 258
Msa0063670 MtrunA17_Chr3g0107511 32.135 473 305 6 15 473 4 474 1.21e-76 248
Msa0063670 MtrunA17_Chr6g0455461 30.753 465 308 9 18 474 4 462 2.44e-76 246
Msa0063670 MtrunA17_Chr5g0400411 34.821 448 276 9 40 473 41 486 1.84e-75 245
Msa0063670 MtrunA17_Chr5g0400421 32.181 463 286 11 32 473 32 487 2.36e-75 244
Msa0063670 MtrunA17_Chr2g0293421 31.453 461 298 9 21 465 19 477 1.19e-74 243
Msa0063670 MtrunA17_Chr8g0372411 31.066 441 289 8 45 474 40 476 1.59e-74 242
Msa0063670 MtrunA17_Chr3g0078411 30.108 465 311 9 18 474 4 462 3.60e-74 241
Msa0063670 MtrunA17_Chr3g0113321 29.663 445 290 9 44 473 29 465 3.33e-73 239
Msa0063670 MtrunA17_Chr3g0107501 32.444 450 288 7 38 473 27 474 4.18e-73 238
Msa0063670 MtrunA17_Chr2g0293411 30.913 482 304 11 20 478 14 489 7.28e-73 238
Msa0063670 MtrunA17_Chr7g0226771 31.942 479 296 13 20 477 7 476 9.54e-73 238
Msa0063670 MtrunA17_Chr5g0403931 31.106 479 306 9 13 473 5 477 1.40e-72 237
Msa0063670 MtrunA17_Chr3g0141801 30.655 473 301 9 21 473 16 481 1.56e-72 237
Msa0063670 MtrunA17_Chr8g0341951 31.655 417 266 7 44 448 37 446 1.97e-72 236
Msa0063670 MtrunA17_Chr8g0381571 33.257 436 271 9 30 447 27 460 1.91e-71 234
Msa0063670 MtrunA17_Chr8g0381541 32.880 441 276 9 30 452 27 465 3.04e-71 234
Msa0063670 MtrunA17_Chr8g0388921 31.702 470 301 10 20 473 9 474 3.90e-71 233
Msa0063670 MtrunA17_Chr5g0443401 30.103 485 304 12 10 476 10 477 1.38e-68 226
Msa0063670 MtrunA17_Chr5g0397971 29.590 463 311 9 26 476 11 470 2.84e-64 215
Msa0063670 MtrunA17_Chr3g0089361 29.474 475 304 12 21 474 11 475 3.56e-64 215
Msa0063670 MtrunA17_Chr8g0372711 29.362 470 315 8 19 476 19 483 9.09e-64 214
Msa0063670 MtrunA17_Chr6g0478161 29.498 478 309 11 16 474 20 488 3.66e-63 213
Msa0063670 MtrunA17_Chr5g0443731 29.712 451 299 9 41 477 26 472 5.13e-62 209
Msa0063670 MtrunA17_Chr8g0380471 29.336 467 312 10 20 473 12 473 8.33e-61 206
Msa0063670 MtrunA17_Chr8g0339861 30.635 457 286 13 38 474 39 484 3.14e-58 199
Msa0063670 MtrunA17_Chr8g0380931 27.252 444 310 10 42 473 60 502 2.40e-55 192
Msa0063670 MtrunA17_Chr8g0373441 31.250 416 250 12 10 407 7 404 1.42e-54 188
Msa0063670 MtrunA17_Chr3g0089351 27.820 399 279 7 79 474 1 393 1.01e-53 185
Msa0063670 MtrunA17_Chr5g0404861 43.151 146 78 2 331 473 13 156 1.08e-34 127
Msa0063670 MtrunA17_Chr8g0381551 28.431 306 188 8 30 312 27 324 9.20e-30 119
Msa0063670 MtrunA17_Chr6g0463551 34.066 182 109 4 199 372 11 189 1.00e-29 115
Msa0063670 MtrunA17_Chr8g0381561 45.455 110 59 1 339 447 2 111 2.29e-27 106
Msa0063670 MtrunA17_Chr1g0174481 26.419 458 285 17 38 454 28 474 8.63e-27 113
Msa0063670 MtrunA17_Chr6g0458561 25.562 489 299 19 14 450 22 497 3.28e-26 111
Msa0063670 MtrunA17_Chr7g0235261 25.432 405 263 12 73 447 85 480 3.46e-26 111
Msa0063670 MtrunA17_Chr8g0382901 23.982 442 297 14 33 450 17 443 4.36e-26 112
Msa0063670 MtrunA17_Chr8g0382901 22.198 455 313 12 28 450 477 922 5.74e-21 96.7
Msa0063670 MtrunA17_Chr4g0000151 39.062 128 76 2 339 465 5 131 4.36e-26 103
Msa0063670 MtrunA17_Chr8g0362731 25.916 382 233 14 104 450 15 381 1.76e-25 108
Msa0063670 MtrunA17_Chr1g0161671 26.298 289 197 7 38 312 23 309 2.24e-25 106
Msa0063670 MtrunA17_Chr8g0339331 24.619 459 279 15 45 450 40 484 2.39e-25 108
Msa0063670 MtrunA17_Chr5g0403321 24.454 458 284 15 41 450 31 474 4.13e-25 108
Msa0063670 MtrunA17_Chr5g0404881 30.256 195 129 4 44 232 36 229 5.60e-25 103
Msa0063670 MtrunA17_Chr8g0361471 26.160 474 297 16 21 450 5 469 1.50e-24 106
Msa0063670 MtrunA17_Chr4g0000171 27.018 285 187 10 38 307 37 315 1.57e-24 104
Msa0063670 MtrunA17_Chr3g0116741 24.845 483 314 15 13 458 21 491 1.75e-24 106
Msa0063670 MtrunA17_Chr5g0436981 32.317 164 104 4 37 195 22 183 2.27e-24 100
Msa0063670 MtrunA17_Chr4g0000161 27.113 284 188 8 38 307 37 315 2.67e-24 103
Msa0063670 MtrunA17_Chr1g0174451 24.777 448 295 11 45 454 37 480 3.51e-24 105
Msa0063670 MtrunA17_Chr3g0101671 23.760 484 318 15 7 450 1 473 3.99e-24 105
Msa0063670 MtrunA17_Chr2g0310381 23.747 459 308 16 18 440 3 455 4.46e-24 105
Msa0063670 MtrunA17_Chr2g0310391 23.282 451 298 16 18 431 3 442 4.67e-24 104
Msa0063670 MtrunA17_Chr6g0463541 42.453 106 61 0 368 473 2 107 6.26e-24 96.3
Msa0063670 MtrunA17_Chr5g0405001 23.142 471 319 11 17 450 17 481 9.04e-24 104
Msa0063670 MtrunA17_Chr3g0084921 25.202 496 310 16 12 457 2 486 1.19e-23 103
Msa0063670 MtrunA17_Chr4g0004601 23.944 426 264 17 90 474 123 529 1.39e-23 103
Msa0063670 MtrunA17_Chr5g0437001 43.519 108 57 1 340 443 1 108 1.73e-23 96.7
Msa0063670 MtrunA17_Chr6g0465511 25.527 474 300 17 21 450 5 469 1.81e-23 103
Msa0063670 MtrunA17_Chr4g0035921 22.222 486 322 12 12 450 5 481 1.83e-23 103
Msa0063670 MtrunA17_Chr1g0174441 24.838 463 293 16 38 454 48 501 1.97e-23 103
Msa0063670 MtrunA17_Chr1g0200961 25.000 472 301 16 20 450 6 465 2.50e-23 102
Msa0063670 MtrunA17_Chr6g0466331 25.053 475 301 18 21 450 5 469 3.70e-23 102
Msa0063670 MtrunA17_Chr5g0403351 23.173 479 311 16 14 450 8 471 4.92e-23 102
Msa0063670 MtrunA17_Chr1g0160851 24.742 485 298 16 14 452 4 467 6.57e-23 101
Msa0063670 MtrunA17_Chr3g0116681 25.106 470 305 15 17 450 13 471 1.20e-22 100
Msa0063670 MtrunA17_Chr3g0101611 25.056 447 289 18 44 453 38 475 2.14e-22 100
Msa0063670 MtrunA17_Chr7g0258221 23.819 487 322 17 12 457 2 480 3.45e-22 99.4
Msa0063670 MtrunA17_Chr1g0162801 24.124 485 308 19 12 450 1 471 3.64e-22 99.4
Msa0063670 MtrunA17_Chr4g0076161 23.285 481 317 15 12 450 1 471 4.33e-22 99.0
Msa0063670 MtrunA17_Chr3g0128461 23.704 405 266 12 68 439 92 486 5.03e-22 99.0
Msa0063670 MtrunA17_Chr1g0162811 22.965 479 318 14 12 450 1 468 5.75e-22 98.6
Msa0063670 MtrunA17_Chr5g0445381 22.747 466 326 16 14 450 39 499 6.38e-22 98.6
Msa0063670 MtrunA17_Chr7g0235551 25.714 455 286 16 44 454 33 479 1.23e-21 97.8
Msa0063670 MtrunA17_Chr4g0058231 23.918 485 304 17 18 452 2 471 1.84e-21 97.1
Msa0063670 MtrunA17_Chr7g0218601 23.810 441 295 12 44 450 34 467 2.02e-21 97.1
Msa0063670 MtrunA17_Chr5g0431511 24.153 472 310 16 44 478 33 493 2.29e-21 97.1
Msa0063670 MtrunA17_Chr8g0334891 23.333 450 293 13 42 463 36 461 3.28e-21 96.3
Msa0063670 MtrunA17_Chr1g0213671 28.222 450 268 19 44 448 34 473 3.41e-21 96.3
Msa0063670 MtrunA17_Chr6g0463801 25.000 440 282 14 44 448 37 463 3.51e-21 96.3
Msa0063670 MtrunA17_Chr1g0174471 22.788 452 298 11 46 454 52 495 4.17e-21 96.3
Msa0063670 MtrunA17_Chr4g0011961 24.468 470 312 15 16 450 2 463 5.21e-21 95.9
Msa0063670 MtrunA17_Chr6g0466901 24.524 473 298 18 12 431 1 467 7.83e-21 95.5
Msa0063670 MtrunA17_Chr4g0013471 25.076 327 210 11 38 345 37 347 9.44e-21 94.4
Msa0063670 MtrunA17_Chr7g0218611 24.330 448 298 12 38 450 27 468 1.16e-20 94.7
Msa0063670 MtrunA17_Chr8g0390881 22.500 480 322 16 15 453 5 475 1.49e-20 94.4
Msa0063670 MtrunA17_Chr5g0431501 24.385 447 289 14 44 450 33 470 1.68e-20 94.4
Msa0063670 MtrunA17_Chr5g0431461 24.385 447 289 14 44 450 33 470 1.68e-20 94.4
Msa0063670 MtrunA17_Chr4g0057001 22.921 445 295 13 44 450 50 484 1.87e-20 94.4
Msa0063670 MtrunA17_Chr8g0346261 23.725 451 293 15 46 458 86 523 1.98e-20 94.4
Msa0063670 MtrunA17_Chr5g0445461 24.736 473 312 19 10 450 8 468 2.17e-20 94.0
Msa0063670 MtrunA17_Chr7g0215181 25.600 375 229 15 133 476 152 507 2.36e-20 94.0
Msa0063670 MtrunA17_Chr4g0046351 23.326 433 277 15 74 462 65 486 3.29e-20 93.6
Msa0063670 MtrunA17_Chr4g0046331 24.000 425 266 15 74 452 65 478 4.03e-20 93.2
Msa0063670 MtrunA17_Chr4g0046321 24.292 424 264 16 74 452 65 476 4.12e-20 93.2
Msa0063670 MtrunA17_Chr4g0058201 23.581 458 310 15 34 458 18 468 4.40e-20 92.8
Msa0063670 MtrunA17_Chr4g0074581 23.288 511 314 16 3 453 24 516 4.94e-20 93.2
Msa0063670 MtrunA17_Chr3g0101631 22.796 465 315 13 19 450 11 464 4.97e-20 92.8
Msa0063670 MtrunA17_Chr1g0193811 23.460 422 275 14 88 473 104 513 5.24e-20 92.8
Msa0063670 MtrunA17_Chr3g0094231 24.459 462 279 16 38 450 30 470 6.62e-20 92.4
Msa0063670 MtrunA17_Chr8g0372251 23.040 421 280 11 45 427 36 450 8.51e-20 92.0
Msa0063670 MtrunA17_Chr4g0063221 22.515 493 308 16 12 444 12 490 8.73e-20 92.0
Msa0063670 MtrunA17_Chr0c19g0493771 31.122 196 119 5 262 450 434 620 1.09e-19 92.4
Msa0063670 MtrunA17_Chr8g0336361 21.702 470 292 13 73 474 95 556 1.17e-19 92.0
Msa0063670 MtrunA17_Chr3g0101661 23.661 448 302 16 39 452 33 474 1.20e-19 91.7
Msa0063670 MtrunA17_Chr5g0401681 23.207 474 306 13 19 452 8 463 1.24e-19 91.7
Msa0063670 MtrunA17_Chr3g0101721 22.345 452 293 15 44 452 37 473 1.53e-19 91.3
Msa0063670 MtrunA17_Chr5g0445451 23.305 472 320 18 10 450 8 468 1.95e-19 90.9
Msa0063670 MtrunA17_Chr3g0101731 22.122 443 300 11 44 450 36 469 2.00e-19 90.9
Msa0063670 MtrunA17_Chr1g0205371 25.470 479 297 18 18 453 8 469 2.12e-19 90.9
Msa0063670 MtrunA17_Chr1g0174461 21.488 484 318 10 19 454 10 479 2.63e-19 90.5
Msa0063670 MtrunA17_Chr5g0446151 23.146 445 300 15 38 450 35 469 2.81e-19 90.5
Msa0063670 MtrunA17_Chr1g0203141 23.714 447 280 17 68 473 86 512 2.92e-19 90.5
Msa0063670 MtrunA17_Chr4g0047641 23.629 474 311 16 22 450 17 484 3.15e-19 90.5
Msa0063670 MtrunA17_Chr6g0457421 25.721 416 251 15 103 476 106 505 3.50e-19 90.1
Msa0063670 MtrunA17_Chr1g0154731 23.333 420 289 13 76 471 88 498 3.61e-19 90.1
Msa0063670 MtrunA17_Chr8g0362701 24.256 437 282 13 60 454 50 479 3.67e-19 90.1
Msa0063670 MtrunA17_Chr3g0101701 22.296 453 293 17 44 452 38 475 4.23e-19 90.1
Msa0063670 MtrunA17_Chr4g0011901 23.077 442 297 12 45 450 30 464 4.71e-19 89.7
Msa0063670 MtrunA17_Chr5g0445421 21.767 464 316 15 10 450 82 521 5.23e-19 89.7
Msa0063670 MtrunA17_Chr4g0011981 24.783 460 290 17 33 450 19 464 1.06e-18 88.6
Msa0063670 MtrunA17_Chr8g0362481 22.356 416 260 10 88 454 9 410 1.20e-18 88.2
Msa0063670 MtrunA17_Chr4g0058191 22.083 480 320 15 18 458 2 466 1.39e-18 88.2
Msa0063670 MtrunA17_Chr4g0047661 23.333 480 321 15 16 456 20 491 1.53e-18 88.2
Msa0063670 MtrunA17_Chr1g0160861 32.584 178 106 5 283 452 137 308 1.61e-18 86.7
Msa0063670 MtrunA17_Chr5g0446161 23.173 479 322 17 7 450 1 468 1.86e-18 87.8
Msa0063670 MtrunA17_Chr5g0413911 24.516 465 296 17 44 455 42 504 1.92e-18 88.2
Msa0063670 MtrunA17_Chr4g0058281 22.567 483 328 15 14 458 15 489 1.95e-18 87.8
Msa0063670 MtrunA17_Chr3g0101821 21.474 475 320 13 16 450 8 469 2.50e-18 87.4
Msa0063670 MtrunA17_Chr8g0356001 22.899 476 318 13 15 450 8 474 2.73e-18 87.4
Msa0063670 MtrunA17_Chr3g0101581 22.833 473 309 17 19 450 13 470 2.75e-18 87.4
Msa0063670 MtrunA17_Chr1g0161641 47.368 76 39 1 373 447 13 88 3.17e-18 79.3
Msa0063670 MtrunA17_Chr5g0395321 21.552 464 327 12 12 450 14 465 3.18e-18 87.4
Msa0063670 MtrunA17_Chr6g0451681 23.305 472 285 19 3 446 16 438 3.41e-18 87.0
Msa0063670 MtrunA17_Chr5g0445441 22.669 472 323 16 10 450 49 509 3.68e-18 87.4
Msa0063670 MtrunA17_Chr5g0406651 22.658 459 315 15 27 450 12 465 4.67e-18 86.7
Msa0063670 MtrunA17_Chr3g0101601 22.698 467 314 14 19 450 11 465 4.90e-18 86.7
Msa0063670 MtrunA17_Chr5g0403331 23.156 488 310 18 12 450 1 472 6.57e-18 86.3
Msa0063670 MtrunA17_Chr1g0205361 24.945 453 277 17 44 452 34 467 7.89e-18 85.9
Msa0063670 MtrunA17_Chr3g0101691 22.000 450 304 15 39 450 33 473 9.33e-18 85.9
Msa0063670 MtrunA17_Chr8g0344191 23.480 477 309 18 14 450 46 506 2.14e-17 84.7
Msa0063670 MtrunA17_Chr1g0164211 22.595 447 295 12 44 452 31 464 4.18e-17 84.0
Msa0063670 MtrunA17_Chr2g0296661 23.150 419 275 12 69 449 56 465 4.68e-17 83.6
Msa0063670 MtrunA17_Chr4g0011921 24.843 479 302 16 14 450 2 464 5.11e-17 83.6
Msa0063670 MtrunA17_Chr8g0334941 25.694 288 180 7 194 463 35 306 5.86e-17 82.0
Msa0063670 MtrunA17_Chr7g0258211 20.323 433 294 11 69 458 63 487 7.35e-17 83.2
Msa0063670 MtrunA17_Chr4g0030701 22.658 459 294 14 45 453 36 483 8.78e-17 82.8
Msa0063670 MtrunA17_Chr4g0024771 22.553 470 326 17 10 450 8 468 1.35e-16 82.4
Msa0063670 MtrunA17_Chr3g0101651 21.218 476 322 16 18 452 12 475 1.65e-16 82.0
Msa0063670 MtrunA17_Chr4g0056951 23.515 421 278 15 67 450 66 479 2.22e-16 81.6
Msa0063670 MtrunA17_Chr8g0370641 23.279 494 313 14 18 458 17 497 2.23e-16 81.6
Msa0063670 MtrunA17_Chr1g0179811 23.649 444 280 14 76 474 108 537 3.06e-16 81.3
Msa0063670 MtrunA17_Chr8g0351801 23.101 316 184 10 174 456 203 492 3.67e-16 80.9
Msa0063670 MtrunA17_Chr5g0396521 26.894 264 147 9 236 458 292 550 5.44e-16 80.5
Msa0063670 MtrunA17_Chr6g0479681 22.737 453 293 16 68 473 84 526 5.51e-16 80.5
Msa0063670 MtrunA17_Chr1g0200951 23.077 481 291 20 28 448 36 497 5.77e-16 80.5
Msa0063670 MtrunA17_Chr4g0058211 28.804 184 121 4 281 458 15 194 7.70e-16 76.6
Msa0063670 MtrunA17_Chr6g0463561 26.404 178 124 3 6 178 2 177 8.02e-16 75.9
Msa0063670 MtrunA17_Chr4g0030711 22.611 429 281 13 69 451 61 484 1.13e-15 79.3
Msa0063670 MtrunA17_Chr6g0451741 23.142 471 287 18 20 427 34 492 1.46e-15 79.3
Msa0063670 MtrunA17_Chr4g0011881 23.491 464 305 16 25 450 13 464 1.71e-15 79.0
Msa0063670 MtrunA17_Chr2g0280261 23.596 445 299 16 44 460 34 465 2.01e-15 78.6
Msa0063670 MtrunA17_Chr5g0395331 22.000 450 294 11 44 450 37 472 2.03e-15 78.6
Msa0063670 MtrunA17_Chr5g0395381 27.749 191 128 3 266 450 254 440 2.50e-15 78.2
Msa0063670 MtrunA17_Chr1g0174431 28.889 180 112 4 288 455 4 179 2.52e-15 75.1
Msa0063670 MtrunA17_Chr8g0377341 22.016 486 321 18 3 448 28 495 2.76e-15 78.2
Msa0063670 MtrunA17_Chr3g0101831 21.396 444 302 16 44 450 37 470 3.35e-15 77.8
Msa0063670 MtrunA17_Chr5g0401691 22.059 476 326 13 10 452 17 480 3.54e-15 77.8
Msa0063670 MtrunA17_Chr5g0400391 43.373 83 46 1 391 472 2 84 5.12e-15 71.2
Msa0063670 MtrunA17_Chr5g0430081 21.921 479 328 17 14 453 2 473 5.16e-15 77.4
Msa0063670 MtrunA17_Chr7g0255531 23.810 483 297 17 12 448 5 462 5.73e-15 77.0
Msa0063670 MtrunA17_Chr5g0430031 20.719 473 333 17 15 450 5 472 9.66e-15 76.6
Msa0063670 MtrunA17_Chr2g0296651 23.591 479 312 16 12 454 5 465 1.13e-14 76.3
Msa0063670 MtrunA17_Chr3g0089381 26.178 191 124 6 200 382 21 202 1.40e-14 72.8
Msa0063670 MtrunA17_Chr1g0176831 21.371 496 341 15 14 474 33 514 1.69e-14 75.9
Msa0063670 MtrunA17_Chr5g0419691 23.620 453 301 17 35 450 20 464 1.73e-14 75.5
Msa0063670 MtrunA17_Chr1g0161651 24.919 309 171 9 19 268 12 318 3.10e-14 73.9
Msa0063670 MtrunA17_Chr4g0053621 22.687 454 295 17 40 451 27 466 4.78e-14 74.3
Msa0063670 MtrunA17_Chr7g0246181 22.799 443 289 14 55 457 45 474 6.37e-14 73.9
Msa0063670 MtrunA17_Chr4g0052851 22.788 452 292 15 37 453 26 455 6.57e-14 73.9
Msa0063670 MtrunA17_Chr3g0135841 24.528 265 179 7 220 469 271 529 9.25e-14 73.6
Msa0063670 MtrunA17_Chr4g0011851 29.319 191 117 7 270 450 1 183 1.10e-13 70.1
Msa0063670 MtrunA17_Chr3g0082701 22.065 494 315 18 15 445 7 493 1.22e-13 73.2
Msa0063670 MtrunA17_Chr5g0446101 25.571 219 150 5 240 450 68 281 1.36e-13 71.6
Msa0063670 MtrunA17_Chr7g0262111 23.227 409 276 13 68 450 82 478 1.70e-13 72.4
Msa0063670 MtrunA17_Chr4g0046681 27.647 170 105 6 284 440 30 194 2.66e-13 69.7
Msa0063670 MtrunA17_Chr7g0248991 30.719 153 96 4 262 413 216 359 2.81e-13 71.2
Msa0063670 MtrunA17_Chr3g0101741 22.444 401 264 13 90 458 11 396 2.94e-13 71.6
Msa0063670 MtrunA17_Chr5g0445531 21.839 435 307 15 44 450 38 467 3.86e-13 71.6
Msa0063670 MtrunA17_Chr4g0039391 26.486 185 127 4 274 453 293 473 6.57e-13 70.9
Msa0063670 MtrunA17_Chr1g0207841 27.419 186 125 4 274 453 304 485 7.19e-13 70.9
Msa0063670 MtrunA17_Chr8g0364631 22.083 480 322 17 44 476 32 506 7.53e-13 70.5
Msa0063670 MtrunA17_Chr4g0052881 25.118 211 152 4 240 449 256 461 8.37e-13 70.5
Msa0063670 MtrunA17_Chr3g0089291 24.454 229 166 6 79 304 1 225 1.13e-12 67.8
Msa0063670 MtrunA17_Chr4g0046631 20.329 487 336 14 1 440 1 482 1.15e-12 70.1
Msa0063670 MtrunA17_Chr4g0017411 25.967 181 129 3 274 453 276 452 1.73e-12 69.3
Msa0063670 MtrunA17_Chr2g0313771 21.308 413 280 11 90 468 114 515 2.24e-12 68.9
Msa0063670 MtrunA17_Chr2g0313791 22.427 379 253 10 87 435 102 469 2.45e-12 68.9
Msa0063670 MtrunA17_Chr1g0161661 42.623 61 34 1 392 451 15 75 5.49e-12 62.0
Msa0063670 MtrunA17_Chr2g0280011 28.492 179 113 4 288 454 11 186 1.29e-11 63.9
Msa0063670 MtrunA17_Chr2g0280081 21.596 426 292 12 68 454 557 979 1.73e-11 67.0
Msa0063670 MtrunA17_Chr2g0280121 21.911 429 289 14 68 454 60 484 2.03e-11 66.2
Msa0063670 MtrunA17_Chr4g0026941 27.969 261 162 8 228 473 287 536 3.38e-11 65.5
Msa0063670 MtrunA17_Chr8g0373431 45.902 61 32 1 413 473 4 63 6.32e-11 58.2
Msa0063670 MtrunA17_Chr8g0354571 22.333 403 264 15 87 453 111 500 7.33e-11 64.3
Msa0063670 MtrunA17_Chr4g0011941 28.736 174 110 5 285 450 1 168 8.08e-11 61.6
Msa0063670 MtrunA17_Chr8g0354531 22.963 405 256 13 88 453 234 621 9.19e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0063670 AT2G29090.2 67.265 446 143 3 31 474 36 480 0.0 615
Msa0063670 AT2G29090.1 67.265 446 143 3 31 474 36 480 0.0 615
Msa0063670 AT5G45340.1 56.410 468 195 3 12 476 1 462 0.0 551
Msa0063670 AT4G19230.1 56.410 468 195 4 12 476 1 462 0.0 546
Msa0063670 AT3G19270.2 57.330 457 190 3 16 471 9 461 0.0 534
Msa0063670 AT2G29090.3 66.580 386 126 3 91 474 1 385 0.0 517
Msa0063670 AT5G45340.2 55.705 447 189 3 12 455 1 441 1.53e-180 513
Msa0063670 AT4G19230.2 54.957 464 199 5 12 471 1 458 3.71e-180 513
Msa0063670 AT3G19270.1 57.143 434 181 3 16 448 9 438 6.56e-176 501
Msa0063670 AT2G29090.4 63.415 287 102 3 31 315 36 321 3.12e-120 355
Msa0063670 AT1G19630.1 32.911 474 301 9 14 474 4 473 1.32e-76 248
Msa0063670 AT2G32440.2 33.264 478 297 11 16 474 11 485 2.14e-75 245
Msa0063670 AT2G32440.1 33.264 478 297 11 16 474 11 485 2.14e-75 245
Msa0063670 AT1G05160.2 32.960 446 282 9 44 474 45 488 2.34e-75 245
Msa0063670 AT1G05160.1 32.960 446 282 9 44 474 45 488 2.34e-75 245
Msa0063670 AT5G38970.1 29.412 459 315 7 20 474 10 463 1.96e-74 242
Msa0063670 AT5G05690.1 32.251 431 271 8 44 461 31 453 4.64e-74 241
Msa0063670 AT3G13730.1 31.757 444 281 8 45 473 52 488 2.48e-72 237
Msa0063670 AT1G19630.3 33.110 447 283 8 14 448 4 446 9.04e-72 234
Msa0063670 AT3G30180.1 29.933 451 308 6 20 466 10 456 2.42e-71 234
Msa0063670 AT3G13730.2 31.818 418 265 7 45 447 52 464 3.17e-70 231
Msa0063670 AT4G36380.1 31.011 445 290 8 44 474 69 510 5.04e-70 232
Msa0063670 AT5G36110.1 31.320 447 283 10 44 473 34 473 1.59e-69 229
Msa0063670 AT2G42850.1 30.832 493 301 13 13 478 6 485 1.25e-66 222
Msa0063670 AT1G12740.1 28.634 454 308 7 20 459 8 459 7.08e-64 214
Msa0063670 AT5G05690.2 32.086 374 238 6 44 408 31 397 9.88e-64 212
Msa0063670 AT3G50660.1 29.583 480 281 11 44 474 39 510 5.61e-63 213
Msa0063670 AT5G38970.3 29.262 393 272 5 20 410 10 398 1.33e-62 209
Msa0063670 AT1G12740.2 28.478 460 307 8 20 459 8 465 8.10e-62 209
Msa0063670 AT1G12740.4 28.261 460 308 8 20 459 8 465 1.62e-61 208
Msa0063670 AT1G73340.1 28.482 481 307 9 16 478 21 482 3.18e-61 208
Msa0063670 AT1G19630.2 32.847 411 259 9 14 411 4 410 4.33e-60 203
Msa0063670 AT5G48000.2 28.446 457 307 10 34 474 22 474 7.62e-57 196
Msa0063670 AT5G48000.4 28.446 457 307 10 34 474 22 474 7.62e-57 196
Msa0063670 AT5G48000.7 28.446 457 307 10 34 474 22 474 7.62e-57 196
Msa0063670 AT5G48000.6 28.446 457 307 10 34 474 22 474 7.62e-57 196
Msa0063670 AT5G48000.5 28.446 457 307 10 34 474 22 474 7.62e-57 196
Msa0063670 AT5G48000.3 28.446 457 307 10 34 474 22 474 7.62e-57 196
Msa0063670 AT5G48000.1 28.446 457 307 10 34 474 63 515 1.79e-56 196
Msa0063670 AT5G14400.2 30.594 438 266 12 49 473 1 413 3.98e-54 187
Msa0063670 AT1G55940.2 27.856 499 302 18 15 478 17 492 2.68e-52 184
Msa0063670 AT5G14400.3 30.993 413 248 11 49 448 1 389 3.12e-52 181
Msa0063670 AT5G38970.2 27.154 383 271 6 96 474 4 382 2.07e-50 176
Msa0063670 AT5G38970.4 27.154 383 271 6 96 474 4 382 2.07e-50 176
Msa0063670 AT1G55940.1 28.480 467 279 17 15 446 17 463 6.08e-50 177
Msa0063670 AT1G78490.1 27.273 462 312 11 19 462 7 462 1.85e-49 176
Msa0063670 AT5G05690.3 29.630 351 230 7 130 471 2 344 6.44e-49 171
Msa0063670 AT4G15300.2 28.097 452 294 12 16 450 8 445 1.96e-46 168
Msa0063670 AT3G50660.2 28.750 400 242 9 44 407 39 431 2.61e-46 167
Msa0063670 AT4G15300.3 28.062 449 292 12 19 450 1 435 3.25e-46 167
Msa0063670 AT1G65670.1 28.842 423 269 12 44 450 35 441 9.46e-46 166
Msa0063670 AT3G44970.1 26.415 477 321 12 19 478 11 474 1.09e-45 166
Msa0063670 AT4G36380.2 28.909 339 230 6 44 372 69 406 2.16e-44 161
Msa0063670 AT5G14400.1 30.366 382 232 11 101 473 3 359 1.10e-41 152
Msa0063670 AT1G12740.3 27.577 359 252 5 20 372 8 364 1.12e-41 152
Msa0063670 AT4G15393.2 26.562 448 299 17 19 450 11 444 2.01e-41 154
Msa0063670 AT4G15310.1 27.416 445 300 11 22 450 11 448 1.86e-39 149
Msa0063670 AT5G36110.2 28.895 353 229 8 44 381 34 379 2.33e-39 147
Msa0063670 AT4G15300.1 26.539 471 293 14 19 450 1 457 7.54e-39 147
Msa0063670 AT1G78490.2 26.485 404 277 9 19 407 7 405 2.70e-38 144
Msa0063670 AT2G42850.2 29.293 396 240 13 13 381 6 388 8.40e-38 142
Msa0063670 AT4G15396.1 25.000 448 308 16 19 450 11 446 9.36e-37 141
Msa0063670 AT4G15396.3 24.888 446 307 16 19 448 11 444 2.37e-35 137
Msa0063670 AT5G14400.4 28.869 336 221 9 49 372 1 330 5.15e-32 125
Msa0063670 AT5G36130.1 41.176 136 78 2 340 473 1 136 1.27e-30 116
Msa0063670 AT4G15396.2 24.444 450 287 18 19 450 11 425 2.38e-30 123
Msa0063670 AT4G15393.1 25.373 402 275 15 19 408 11 399 4.28e-30 121
Msa0063670 AT3G30290.1 24.934 381 266 11 80 450 5 375 3.79e-29 119
Msa0063670 AT2G46960.2 25.629 437 270 14 75 471 91 512 2.21e-27 115
Msa0063670 AT5G57220.1 25.720 486 307 15 12 463 1 466 5.86e-27 114
Msa0063670 AT5G04330.1 24.788 472 300 16 42 466 30 493 9.38e-27 113
Msa0063670 AT4G15396.4 23.691 401 283 14 19 407 11 400 4.43e-26 110
Msa0063670 AT5G36140.1 28.623 276 177 9 44 306 33 301 8.98e-26 107
Msa0063670 AT3G20950.1 23.566 488 317 20 12 452 7 485 1.46e-25 110
Msa0063670 AT4G37400.1 27.389 314 206 10 163 463 168 472 5.18e-25 108
Msa0063670 AT4G37430.1 23.750 480 305 16 16 451 2 464 7.54e-25 107
Msa0063670 AT4G15393.3 24.500 400 248 15 19 408 11 366 2.50e-24 104
Msa0063670 AT2G46960.1 25.253 396 242 13 115 471 16 396 5.70e-24 103
Msa0063670 AT3G20940.1 22.247 445 306 13 44 452 42 482 1.50e-23 103
Msa0063670 AT3G32047.1 23.395 483 329 15 7 453 2 479 3.23e-23 102
Msa0063670 AT3G20110.1 23.663 486 322 17 3 453 1 472 3.94e-23 102
Msa0063670 AT5G25120.1 23.404 470 309 14 18 450 6 461 5.37e-23 102
Msa0063670 AT3G10560.1 23.554 484 322 16 4 448 6 480 1.25e-22 101
Msa0063670 AT4G13770.1 23.617 470 303 14 21 450 14 467 1.59e-22 100
Msa0063670 AT5G25180.1 23.667 469 310 15 18 450 5 461 2.84e-22 100
Msa0063670 AT4G37370.1 27.982 218 151 4 236 452 248 460 4.96e-22 99.4
Msa0063670 AT4G31500.1 23.673 452 286 13 44 450 29 466 7.50e-22 98.6
Msa0063670 AT3G28740.1 28.992 238 160 6 217 451 237 468 3.55e-21 96.7
Msa0063670 AT1G11680.1 21.854 453 301 12 40 463 35 463 6.49e-21 95.9
Msa0063670 AT2G27010.1 22.059 408 290 9 75 461 66 466 6.57e-21 95.9
Msa0063670 AT5G47990.1 23.168 505 338 19 12 474 7 503 1.13e-20 95.1
Msa0063670 AT1G74110.1 24.206 504 310 20 11 455 24 514 1.15e-20 95.5
Msa0063670 AT2G25160.1 21.946 483 321 17 12 446 1 475 1.19e-20 95.1
Msa0063670 AT3G26150.1 24.520 469 298 16 44 469 30 485 1.84e-20 94.7
Msa0063670 AT2G45550.1 25.607 453 276 18 44 450 38 475 2.25e-20 94.4
Msa0063670 AT2G14100.1 23.140 484 316 15 17 458 15 484 3.29e-20 94.0
Msa0063670 AT5G06905.1 23.457 486 315 14 23 458 9 487 3.36e-20 94.0
Msa0063670 AT2G46660.1 22.156 501 326 16 5 458 23 506 3.50e-20 94.0
Msa0063670 AT5G25140.1 23.207 474 314 14 14 450 1 461 4.95e-20 93.2
Msa0063670 AT2G26710.1 24.215 446 276 16 67 471 86 510 5.26e-20 93.2
Msa0063670 AT2G45560.1 25.208 480 297 18 20 450 9 475 5.84e-20 93.2
Msa0063670 AT4G37410.1 25.843 267 181 8 219 476 229 487 7.40e-20 92.8
Msa0063670 AT3G26170.1 23.111 450 293 14 44 450 30 469 7.43e-20 92.8
Msa0063670 AT3G26160.1 25.057 439 260 17 44 431 30 450 1.05e-19 92.4
Msa0063670 AT4G15360.1 22.293 471 317 13 20 450 15 476 1.06e-19 92.4
Msa0063670 AT2G46950.1 24.598 435 277 15 73 471 146 565 1.11e-19 92.4
Msa0063670 AT3G26180.1 23.566 488 310 16 7 450 1 469 1.14e-19 92.0
Msa0063670 AT4G27710.1 24.885 434 275 14 75 471 93 512 1.15e-19 92.0
Msa0063670 AT2G26170.1 21.826 449 302 11 43 446 44 488 1.91e-19 91.7
Msa0063670 AT1G64930.1 22.826 460 292 15 44 451 32 480 2.96e-19 90.9
Msa0063670 AT4G37320.1 26.957 230 155 5 236 457 249 473 3.86e-19 90.5
Msa0063670 AT4G36220.1 22.398 442 296 11 51 450 47 483 4.35e-19 90.5
Msa0063670 AT4G37360.1 30.726 179 119 3 275 452 287 461 4.82e-19 90.1
Msa0063670 AT4G12320.1 23.109 476 309 12 18 450 20 481 4.99e-19 90.1
Msa0063670 AT1G11600.1 22.153 483 311 15 21 448 6 478 7.08e-19 89.7
Msa0063670 AT3G48320.1 23.517 472 308 17 15 450 3 457 1.12e-18 89.0
Msa0063670 AT1G64940.1 22.319 457 297 12 44 451 33 480 1.23e-18 89.0
Msa0063670 AT1G66540.2 28.788 198 130 5 274 466 114 305 1.35e-18 87.0
Msa0063670 AT2G27000.1 22.892 415 278 13 75 452 70 479 1.72e-18 88.6
Msa0063670 AT3G61880.1 23.861 461 290 17 33 448 53 497 2.35e-18 88.2
Msa0063670 AT1G13110.1 22.996 474 317 15 20 450 3 471 2.49e-18 88.2
Msa0063670 AT5G36220.2 24.204 314 209 9 154 453 24 322 2.88e-18 86.7
Msa0063670 AT1G66540.1 28.788 198 130 5 274 466 173 364 3.93e-18 86.7
Msa0063670 AT3G61880.2 23.861 461 290 17 33 448 53 497 4.70e-18 87.4
Msa0063670 AT2G23220.1 24.746 295 196 8 178 452 188 476 8.85e-18 86.3
Msa0063670 AT4G31940.1 29.004 231 131 10 236 445 260 478 1.00e-17 86.3
Msa0063670 AT5G36220.1 24.595 309 204 9 159 453 175 468 1.02e-17 86.3
Msa0063670 AT2G45570.1 23.881 469 291 15 58 472 51 507 1.09e-17 86.3
Msa0063670 AT5G25130.1 29.381 194 127 4 263 450 272 461 1.26e-17 85.9
Msa0063670 AT3G20120.4 21.462 424 282 14 75 458 72 484 1.26e-17 85.9
Msa0063670 AT3G26220.1 23.395 483 318 16 21 458 3 478 1.40e-17 85.9
Msa0063670 AT4G12330.1 22.844 429 286 15 67 458 68 488 1.59e-17 85.5
Msa0063670 AT1G33730.1 26.774 310 195 11 167 455 49 347 2.09e-17 84.3
Msa0063670 AT1G33730.2 26.774 310 195 11 167 455 49 347 2.09e-17 84.3
Msa0063670 AT3G26230.1 22.574 474 314 12 21 450 3 467 2.89e-17 84.7
Msa0063670 AT5G24900.1 22.768 448 292 16 69 474 90 525 3.92e-17 84.3
Msa0063670 AT3G26270.1 22.440 459 306 14 33 450 21 470 4.14e-17 84.3
Msa0063670 AT4G15110.1 24.444 270 154 7 234 458 294 558 5.37e-17 84.3
Msa0063670 AT1G50520.1 21.604 449 299 11 69 474 68 506 5.38e-17 84.0
Msa0063670 AT2G23190.1 26.991 226 157 5 228 452 287 505 6.48e-17 84.0
Msa0063670 AT3G52970.1 24.948 481 302 15 44 478 36 503 7.48e-17 83.6
Msa0063670 AT4G31950.1 27.027 222 134 7 231 431 243 457 8.01e-17 83.6
Msa0063670 AT5G24900.2 25.373 335 204 14 173 474 87 408 1.09e-16 82.4
Msa0063670 AT4G37340.1 29.282 181 121 4 274 452 286 461 1.28e-16 82.8
Msa0063670 AT3G20130.1 21.667 420 276 12 75 452 73 481 1.57e-16 82.4
Msa0063670 AT3G20960.2 22.708 480 328 17 12 453 7 481 1.59e-16 82.4
Msa0063670 AT4G31970.1 22.222 459 285 19 45 445 33 477 1.73e-16 82.4
Msa0063670 AT3G26300.1 22.366 465 322 16 20 450 6 465 1.87e-16 82.0
Msa0063670 AT5G24910.1 21.491 456 303 15 61 473 86 529 1.91e-16 82.4
Msa0063670 AT5G44620.1 22.406 424 280 15 67 450 68 482 2.01e-16 82.0
Msa0063670 AT3G20130.2 25.229 218 148 4 246 452 240 453 2.19e-16 82.0
Msa0063670 AT1G31800.1 27.778 198 127 5 261 451 354 542 2.35e-16 82.0
Msa0063670 AT3G20120.2 22.740 365 233 12 119 458 8 348 2.38e-16 81.3
Msa0063670 AT3G20120.3 22.740 365 233 12 119 458 8 348 2.38e-16 81.3
Msa0063670 AT3G20120.1 22.740 365 233 12 119 458 8 348 2.38e-16 81.3
Msa0063670 AT1G64950.1 21.711 456 301 11 44 451 32 479 2.64e-16 81.6
Msa0063670 AT3G26200.1 23.368 475 297 16 44 466 28 487 2.88e-16 81.6
Msa0063670 AT3G26190.1 22.717 449 295 13 44 450 28 466 3.05e-16 81.6
Msa0063670 AT2G34490.1 21.951 492 336 18 17 474 13 490 3.78e-16 81.3
Msa0063670 AT5G67310.1 29.050 179 118 3 274 449 297 469 4.63e-16 80.9
Msa0063670 AT3G26180.2 27.604 192 130 4 265 450 147 335 5.50e-16 79.7
Msa0063670 AT3G53130.1 28.205 234 136 8 228 439 278 501 5.74e-16 80.9
Msa0063670 AT2G12190.1 22.290 489 317 13 44 478 32 511 6.89e-16 80.5
Msa0063670 AT3G48290.1 23.025 443 306 15 35 450 24 458 8.32e-16 80.1
Msa0063670 AT3G44970.2 23.121 346 243 10 32 361 21 359 1.45e-15 78.6
Msa0063670 AT2G26170.2 24.576 236 166 4 220 446 173 405 1.46e-15 79.3
Msa0063670 AT3G52970.2 24.646 495 300 17 44 478 36 517 2.21e-15 79.0
Msa0063670 AT4G37310.1 23.404 470 312 16 41 470 27 488 2.50e-15 79.0
Msa0063670 AT3G48300.1 23.111 450 304 20 35 453 19 457 2.86e-15 78.6
Msa0063670 AT3G48300.2 23.111 450 304 20 35 453 21 459 2.88e-15 78.6
Msa0063670 AT1G13080.1 25.248 202 142 3 261 456 277 475 2.97e-15 78.6
Msa0063670 AT1G13080.2 26.020 196 136 4 261 450 159 351 3.82e-15 77.4
Msa0063670 AT2G30750.1 22.422 446 309 13 44 458 33 472 4.41e-15 77.8
Msa0063670 AT1G13100.1 24.444 225 153 4 257 467 269 490 5.91e-15 77.4
Msa0063670 AT4G37330.1 25.701 214 153 4 240 452 250 458 1.11e-14 76.6
Msa0063670 AT3G26280.1 22.340 470 314 16 19 450 15 471 1.58e-14 76.3
Msa0063670 AT3G26280.2 22.340 470 314 16 19 450 32 488 1.86e-14 76.3
Msa0063670 AT3G10570.1 21.687 415 278 12 73 448 74 480 2.18e-14 75.9
Msa0063670 AT3G48270.1 22.566 452 297 18 35 450 22 456 2.32e-14 75.5
Msa0063670 AT3G26210.1 25.510 196 133 5 261 448 276 466 2.42e-14 75.5
Msa0063670 AT3G25180.1 29.189 185 121 5 275 453 300 480 2.59e-14 75.5
Msa0063670 AT4G15350.1 21.729 428 283 13 69 454 60 477 2.62e-14 75.5
Msa0063670 AT3G20935.1 26.966 178 116 3 285 452 134 307 4.14e-14 73.9
Msa0063670 AT1G50560.1 22.441 254 176 6 220 458 242 489 4.57e-14 74.7
Msa0063670 AT1G28430.1 19.328 357 261 10 119 460 143 487 6.78e-14 74.3
Msa0063670 AT2G45580.2 27.692 195 125 5 272 455 143 332 7.72e-14 73.2
Msa0063670 AT4G15380.1 21.498 414 274 11 75 449 73 474 8.31e-14 73.9
Msa0063670 AT2G45580.1 27.692 195 125 5 272 455 297 486 1.64e-13 73.2
Msa0063670 AT5G35715.1 21.376 407 267 11 87 450 8 404 2.12e-13 72.4
Msa0063670 AT3G20960.1 22.944 231 161 5 236 453 152 378 2.33e-13 72.4
Msa0063670 AT3G20090.1 22.857 210 142 5 257 453 143 345 1.10e-12 70.1
Msa0063670 AT4G22710.1 21.801 422 277 14 69 449 78 487 1.25e-12 70.5
Msa0063670 AT3G53300.1 23.165 436 275 14 42 431 26 447 1.49e-12 70.1
Msa0063670 AT4G13290.1 22.022 445 290 18 44 450 33 458 2.40e-12 69.3
Msa0063670 AT4G22690.1 21.801 422 277 14 69 449 109 518 2.70e-12 69.3
Msa0063670 AT2G24180.1 21.267 442 309 13 42 449 34 470 3.84e-12 68.9
Msa0063670 AT3G14620.1 22.016 377 260 10 89 439 109 477 7.97e-12 67.8
Msa0063670 AT2G22330.2 23.111 225 161 4 242 458 315 535 7.64e-11 64.7
Msa0063670 AT2G22330.1 23.636 220 156 4 242 453 292 507 8.07e-11 64.7

Find 147 sgRNAs with CRISPR-Local

Find 513 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTCTCATTGGGCCTATAAA+TGG 0.210451 1_2:-24282974 None:intergenic
AACATTTGTCTTTGTCTCTA+TGG 0.210879 1_2:-24274781 None:intergenic
CTTGTGGAGAAGAAAGAATT+TGG 0.230575 1_2:-24274866 None:intergenic
TTCTTTAGAGTTATCTTTAC+TGG 0.255766 1_2:-24282834 None:intergenic
ATGCAATTTGTAACATGTTT+AGG 0.261658 1_2:+24282897 Msa0063670:three_prime_UTR
CATCTCTTGCAAGGTGTTGA+TGG 0.264559 1_2:-24275492 None:intergenic
GGAAGGACTTTCCAACCTTT+TGG 0.265007 1_2:-24279045 None:intergenic
CTATCCTTCCTTTCCTTCAA+TGG 0.266112 1_2:+24274750 Msa0063670:CDS
AGCTCCATGGAACTTCTTAT+TGG 0.291941 1_2:+24275747 Msa0063670:CDS
TTTACTGGTAATCCATGTTT+TGG 0.307736 1_2:-24282819 None:intergenic
AATTATGGTGGTGGGTTGTT+AGG 0.307932 1_2:+24276314 Msa0063670:CDS
AGAAATGAGAGCAGGAATTA+TGG 0.313553 1_2:+24276299 Msa0063670:CDS
ATATTGTATAGTGAAAATTA+AGG 0.346912 1_2:-24274508 None:intergenic
CCAAATGGCATATATGTGTT+TGG 0.353790 1_2:-24279632 None:intergenic
CCTATCATCTTCTCTTTGCT+TGG 0.359780 1_2:-24275320 None:intergenic
AATGGAGATGGAATTCAATA+TGG 0.368593 1_2:+24282783 Msa0063670:CDS
TGTTGAAAGAACAAAGCTTC+TGG 0.379610 1_2:-24275344 None:intergenic
TTGCACTTCTTAATGTCTCT+TGG 0.386421 1_2:-24278960 None:intergenic
GTTGAGTGTACAAAACAATA+AGG 0.392066 1_2:-24274638 None:intergenic
AGGTGGCAAGTTGTGGGAAA+TGG 0.393836 1_2:+24282765 Msa0063670:intron
CCAAACACATATATGCCATT+TGG 0.398411 1_2:+24279632 Msa0063670:CDS
CACCTTGCAAGAGATGAAAA+AGG 0.400822 1_2:+24275499 Msa0063670:CDS
GTGGCTGCAAATTCAGCTTT+TGG 0.406674 1_2:+24275644 Msa0063670:CDS
TTCTTATTGGAAGGCATTGA+AGG 0.410259 1_2:+24275760 Msa0063670:CDS
GTCTCATTGGGCCTATAAAT+GGG 0.410432 1_2:-24282973 None:intergenic
GAGGGAAAGGGAATGAGAAT+TGG 0.410766 1_2:-24274584 None:intergenic
ACATATATGCCATTTGGAAA+TGG 0.411541 1_2:+24279638 Msa0063670:CDS
CCAAGCAAAGAGAAGATGAT+AGG 0.414494 1_2:+24275320 Msa0063670:CDS
TATTGTATAGTGAAAATTAA+GGG 0.416595 1_2:-24274507 None:intergenic
GTTTGACCCTTCAAGATTTG+AGG 0.417850 1_2:+24279119 Msa0063670:CDS
TCAATGGGCTGGCCTTACTT+TGG 0.421222 1_2:+24274815 Msa0063670:CDS
ATCATCTTCTCTTTGCTTGG+AGG 0.421302 1_2:-24275317 None:intergenic
GGGAATGTCGTGGACTTTCA+TGG 0.423416 1_2:+24277878 Msa0063670:CDS
TATGGTGTTTCCACCATTGA+AGG 0.423550 1_2:-24274763 None:intergenic
ATTCTTACCTCAAATCTTGA+AGG 0.432768 1_2:-24279126 None:intergenic
CAGGTGTGCTAGTGCTGCTT+AGG 0.435304 1_2:-24274448 None:intergenic
TCTTTGCTTGGAGGGTATGT+TGG 0.436270 1_2:-24275308 None:intergenic
TTTAAAATTACCTGTATGAA+AGG 0.442438 1_2:-24279727 None:intergenic
TGAAATAAAAGAGATGGAAA+TGG 0.445191 1_2:+24275667 Msa0063670:CDS
TCTTCTCCACAAGGCAGAAA+AGG 0.446028 1_2:+24274876 Msa0063670:CDS
TGCTTTAGGTGGCAAGTTGT+GGG 0.446990 1_2:+24282759 Msa0063670:intron
TTGCTTTAGGTGGCAAGTTG+TGG 0.450644 1_2:+24282758 Msa0063670:intron
AAGAGAATTGTATCATTGCT+TGG 0.456903 1_2:+24275697 Msa0063670:CDS
ACCATCTCACCCTTTCATAC+AGG 0.462924 1_2:+24279717 Msa0063670:CDS
GCATGACAATGTCAATCTCT+TGG 0.463011 1_2:+24276472 Msa0063670:CDS
CATAGGTGGCAAAAGGGAGT+TGG 0.464144 1_2:-24274416 None:intergenic
AAGAGGAGCAATATAATGAA+AGG 0.466239 1_2:-24274722 None:intergenic
TTGTGGAGAAGAAAGAATTT+GGG 0.466276 1_2:-24274865 None:intergenic
ACATAATGTTTATACATACA+TGG 0.467030 1_2:-24283030 None:intergenic
GGCAGATGCCCTTCACAAGC+AGG 0.468177 1_2:+24277911 Msa0063670:CDS
TCATCTTCTCTTTGCTTGGA+GGG 0.468509 1_2:-24275316 None:intergenic
GTTACTCCATTCCAAAAGGT+TGG 0.469052 1_2:+24279034 Msa0063670:CDS
GAATAGATAGTGATGAATAT+AGG 0.476642 1_2:-24274562 None:intergenic
CTGAGAAATATGTACTATAC+AGG 0.476666 1_2:-24274467 None:intergenic
ATAGGTGGCAAAAGGGAGTT+GGG 0.476820 1_2:-24274415 None:intergenic
CCGTTTCCTGTGCCAAAACA+TGG 0.479014 1_2:+24282807 Msa0063670:CDS
AAATGTTTATAAAATTGTAA+AGG 0.484394 1_2:+24283092 Msa0063670:three_prime_UTR
GACTTTCATGGGAGGATACC+AGG 0.485602 1_2:+24277890 Msa0063670:CDS
CAAGGTTACTCCATTCCAAA+AGG 0.489787 1_2:+24279030 Msa0063670:CDS
AAATAAGAAGCAAACTTGCT+AGG 0.490793 1_2:+24277857 Msa0063670:CDS
AATGTTTCATAGGTGGCAAA+AGG 0.491722 1_2:-24274423 None:intergenic
AATATTGATGAAGGCAAGGA+AGG 0.493298 1_2:+24276241 Msa0063670:intron
TCTTATCCTTTGAAGCTCCA+TGG 0.496082 1_2:+24275734 Msa0063670:CDS
GGGTCAAACTTGTGTGGTTG+AGG 0.499290 1_2:-24279105 None:intergenic
TTAGCTATTTATAGAGGGAA+AGG 0.499471 1_2:-24274597 None:intergenic
CCCATTGGCTGCATTATGCA+TGG 0.500537 1_2:+24283006 Msa0063670:three_prime_UTR
GTTGTGTTAGCTATTTATAG+AGG 0.500748 1_2:-24274603 None:intergenic
GTACCAACTAACTGATTCTC+AGG 0.500854 1_2:+24276370 Msa0063670:CDS
TGCTTAGGAAAATGTTTCAT+AGG 0.501808 1_2:-24274433 None:intergenic
CCACAGCTAGTGTTCTAACA+TGG 0.502575 1_2:+24276435 Msa0063670:CDS
CAGGTGGCTGATAATATCAT+TGG 0.502884 1_2:+24276389 Msa0063670:CDS
GCTTGTGAAGGGCATCTGCC+TGG 0.502887 1_2:-24277908 None:intergenic
AGAGGAGCAATATAATGAAA+GGG 0.504519 1_2:-24274721 None:intergenic
TCAGAAAATGAGAGCAAAGT+GGG 0.509018 1_2:+24282871 Msa0063670:three_prime_UTR
AATAAGAAGCAAACTTGCTA+GGG 0.509966 1_2:+24277858 Msa0063670:CDS
GAAGTTCCATGGAGCTTCAA+AGG 0.510494 1_2:-24275740 None:intergenic
TAAGGCCAGCCCATTGAACC+AGG 0.510800 1_2:-24274809 None:intergenic
TTAAAATTACCTGTATGAAA+GGG 0.510930 1_2:-24279726 None:intergenic
ATTGTATCATTGCTTGGAGA+AGG 0.516728 1_2:+24275703 Msa0063670:CDS
ATGGTTCTATTAGCCCAAGT+TGG 0.517928 1_2:-24275473 None:intergenic
TTGAGGGTCTCTCCAAAGTA+AGG 0.518210 1_2:-24274827 None:intergenic
TCCTTCCTTTCCTTCAATGG+TGG 0.518758 1_2:+24274753 Msa0063670:CDS
CAAAACAATAAGGTGAAAGA+TGG 0.521743 1_2:-24274628 None:intergenic
TAGAAAGAAGAAATGAGAGC+AGG 0.523535 1_2:+24276291 Msa0063670:CDS
GAGAGCAGGAATTATGGTGG+TGG 0.528220 1_2:+24276305 Msa0063670:CDS
GGTCAAACTTGTGTGGTTGA+GGG 0.530002 1_2:-24279104 None:intergenic
ATATTCAAGACACACATACT+AGG 0.530311 1_2:+24275212 Msa0063670:CDS
CCATGGAACTTCTTATTGGA+AGG 0.536358 1_2:+24275751 Msa0063670:CDS
CCATGCATAATGCAGCCAAT+GGG 0.539739 1_2:-24283006 None:intergenic
TAGCTATTTATAGAGGGAAA+GGG 0.540603 1_2:-24274596 None:intergenic
GGAATGTCGTGGACTTTCAT+GGG 0.540972 1_2:+24277879 Msa0063670:CDS
AGCTTAGCAAGCTCACTACC+AGG 0.548207 1_2:-24279674 None:intergenic
GGAATTCTGTTGAGAGGCAA+AGG 0.548357 1_2:+24276335 Msa0063670:CDS
TTGAACTAGCTTCTTGAGCA+TGG 0.548888 1_2:-24275381 None:intergenic
TAGTGAGCTTGCTAAGCTTG+AGG 0.549149 1_2:+24279679 Msa0063670:CDS
AATGGAGTCCACTCTTGTCC+TGG 0.549474 1_2:+24279656 Msa0063670:CDS
TCCACCATTGAAGGAAAGGA+AGG 0.549770 1_2:-24274754 None:intergenic
AGCACTGCTCTAGCTGCCTC+AGG 0.552029 1_2:-24275260 None:intergenic
CCTTCCAATAAGAAGTTCCA+TGG 0.552684 1_2:-24275751 None:intergenic
GTTAGAGATGTGGAGCTACA+AGG 0.555677 1_2:+24279012 Msa0063670:CDS
GAGTGGACTCCATTTCCAAA+TGG 0.556423 1_2:-24279647 None:intergenic
CAAGTTGTGGGAAATGGAGA+TGG 0.556760 1_2:+24282771 Msa0063670:CDS
AAAGGGTGAGATGGTGAAGG+AGG 0.557982 1_2:-24279709 None:intergenic
TTGTATCATTGCTTGGAGAA+GGG 0.560306 1_2:+24275704 Msa0063670:CDS
TGTTTCCACCATTGAAGGAA+AGG 0.561586 1_2:-24274758 None:intergenic
CCACCTGAGAATCAGTTAGT+TGG 0.563660 1_2:-24276373 None:intergenic
CAAGCAAAGAGAAGATGATA+GGG 0.563827 1_2:+24275321 Msa0063670:CDS
GAATACTTCTAAAGAGTGGA+AGG 0.563830 1_2:-24279062 None:intergenic
TAGAGAAGCAGTTAGAGATG+TGG 0.564865 1_2:+24279002 Msa0063670:CDS
TAGTGAAAATTAAGGGGTGT+CGG 0.565892 1_2:-24274500 None:intergenic
ATGTTTCATAGGTGGCAAAA+GGG 0.566914 1_2:-24274422 None:intergenic
GCCATGCATAATGCAGCCAA+TGG 0.568445 1_2:-24283007 None:intergenic
TTCTTACCTCAAATCTTGAA+GGG 0.569330 1_2:-24279125 None:intergenic
TTAAGGGGTGTCGGTGTGTG+AGG 0.571812 1_2:-24274491 None:intergenic
TTGTGTTAGCTATTTATAGA+GGG 0.576967 1_2:-24274602 None:intergenic
CAAATTCTTTCTTCTCCACA+AGG 0.581067 1_2:+24274867 Msa0063670:CDS
TTGTTAGGAATTCTGTTGAG+AGG 0.581848 1_2:+24276329 Msa0063670:CDS
TTAGGAAAATGTTTCATAGG+TGG 0.590225 1_2:-24274430 None:intergenic
TGATGAATACTTCTAAAGAG+TGG 0.590871 1_2:-24279066 None:intergenic
CATAATGTTTATACATACAT+GGG 0.601772 1_2:-24283029 None:intergenic
GGCATATATGTGTTTGGTCG+AGG 0.601844 1_2:-24279626 None:intergenic
GAGACAAAACTAGTTCCCAT+TGG 0.602347 1_2:+24282991 Msa0063670:three_prime_UTR
ATTGTATAGTGAAAATTAAG+GGG 0.609348 1_2:-24274506 None:intergenic
AACAATAAGGTGAAAGATGG+CGG 0.619078 1_2:-24274625 None:intergenic
ACCTGTATGAAAGGGTGAGA+TGG 0.620275 1_2:-24279718 None:intergenic
GCTCACTACCAGGACAAGAG+TGG 0.624894 1_2:-24279664 None:intergenic
GCAGATGCCCTTCACAAGCA+GGG 0.625434 1_2:+24277912 Msa0063670:CDS
CACAGCTAGTGTTCTAACAT+GGG 0.626984 1_2:+24276436 Msa0063670:CDS
TTCAGAAAATGAGAGCAAAG+TGG 0.628201 1_2:+24282870 Msa0063670:three_prime_UTR
GAAGCTTTGTTCTTTCAACA+AGG 0.635774 1_2:+24275347 Msa0063670:CDS
AGAGCAGGAATTATGGTGGT+GGG 0.638206 1_2:+24276306 Msa0063670:CDS
TGTGGTTGAGGGAAGAAATG+AGG 0.641955 1_2:-24279093 None:intergenic
CCATGTTAGAACACTAGCTG+TGG 0.646833 1_2:-24276435 None:intergenic
ATGAAAGGGTGAGATGGTGA+AGG 0.646984 1_2:-24279712 None:intergenic
CTTGAAGGGTCAAACTTGTG+TGG 0.648197 1_2:-24279111 None:intergenic
AGGCCAGCCCATTGAACCAG+GGG 0.649208 1_2:-24274807 None:intergenic
ATATATGTGTTTGGTCGAGG+TGG 0.657816 1_2:-24279623 None:intergenic
AATGAGAGCAGGAATTATGG+TGG 0.662652 1_2:+24276302 Msa0063670:CDS
CAGAAAATGAGAGCAAAGTG+GGG 0.667160 1_2:+24282872 Msa0063670:three_prime_UTR
AAGGCCAGCCCATTGAACCA+GGG 0.668384 1_2:-24274808 None:intergenic
CCAACTAACTGATTCTCAGG+TGG 0.680586 1_2:+24276373 Msa0063670:CDS
GGACTTGATATCATCACACA+AGG 0.686125 1_2:-24275239 None:intergenic
AAACTTGCTAGGGAATGTCG+TGG 0.691578 1_2:+24277868 Msa0063670:CDS
ATGTCGTGGACTTTCATGGG+AGG 0.699114 1_2:+24277882 Msa0063670:CDS
AAGTGATGTGAAGAATTGCA+TGG 0.716557 1_2:-24274672 None:intergenic
GGCCAGCCCATTGAACCAGG+GGG 0.732104 1_2:-24274806 None:intergenic
TGTGATGATATCAAGTCCTG+AGG 0.742960 1_2:+24275244 Msa0063670:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTATAAATTATA+TGG - chr1_2:24278242-24278261 None:intergenic 0.0%
!! TACTACAATTTAAATATTTA+CGG - chr1_2:24275048-24275067 None:intergenic 10.0%
!! ATTTAAATTGTAGTAAAATA+TGG + chr1_2:24275053-24275072 Msa0063670:intron 10.0%
!!! ATATATCAATCTTTTAAAAT+TGG + chr1_2:24275871-24275890 Msa0063670:intron 10.0%
!!! TAATATTTTAAAAATCGAAT+CGG - chr1_2:24276154-24276173 None:intergenic 10.0%
!!! AATTAACAATTATTGATAAT+TGG - chr1_2:24277235-24277254 None:intergenic 10.0%
!! AAAAAAAATCTCAAATAAAA+TGG + chr1_2:24277663-24277682 Msa0063670:intron 10.0%
!!! TATATATTTTTCCTATTTAT+AGG - chr1_2:24278112-24278131 None:intergenic 10.0%
!!! TTTTAATTACTATTTTACAA+GGG - chr1_2:24278383-24278402 None:intergenic 10.0%
!!! TTTTTAATTACTATTTTACA+AGG - chr1_2:24278384-24278403 None:intergenic 10.0%
!!! ATTGTATTTTTTTTTTTTGA+GGG - chr1_2:24278520-24278539 None:intergenic 10.0%
!!! TCATATTAAAATTTTGAATT+TGG + chr1_2:24278754-24278773 Msa0063670:intron 10.0%
!! ATAAATGTTAAATAATAGTT+TGG - chr1_2:24278858-24278877 None:intergenic 10.0%
!! TATATATATACTAATTGTAT+TGG - chr1_2:24280320-24280339 None:intergenic 10.0%
!! TAAATGTACAAATATATTAA+TGG - chr1_2:24280579-24280598 None:intergenic 10.0%
!!! TTTTTTATAAAGTAAAGAAA+GGG - chr1_2:24281259-24281278 None:intergenic 10.0%
!!! TTTTTTTATAAAGTAAAGAA+AGG - chr1_2:24281260-24281279 None:intergenic 10.0%
!! AAATGTTTATAAAATTGTAA+AGG + chr1_2:24283092-24283111 Msa0063670:three_prime_UTR 10.0%
!! TATTGTATAGTGAAAATTAA+GGG - chr1_2:24274510-24274529 None:intergenic 15.0%
!! ATATTGTATAGTGAAAATTA+AGG - chr1_2:24274511-24274530 None:intergenic 15.0%
!! ACTACAATTTAAATATTTAC+GGG - chr1_2:24275047-24275066 None:intergenic 15.0%
!!! TTGATGATTTTGAATTTTTA+TGG + chr1_2:24275172-24275191 Msa0063670:intron 15.0%
!!! ATAAAGAAATTTTCTTGTTT+TGG + chr1_2:24275597-24275616 Msa0063670:intron 15.0%
!! AAATATATCGTTGTAAAATT+AGG + chr1_2:24276084-24276103 Msa0063670:intron 15.0%
!! ATCAAGAAAATAATAAAATC+AGG - chr1_2:24277796-24277815 None:intergenic 15.0%
!! AAATGTATAAGTTTATTACT+TGG + chr1_2:24277982-24278001 Msa0063670:intron 15.0%
!! TTCCTTAAAATATATTACAT+TGG + chr1_2:24278311-24278330 Msa0063670:intron 15.0%
!!! AACCAATGTAATATATTTTA+AGG - chr1_2:24278316-24278335 None:intergenic 15.0%
!!! AAAAAATTGTCCATTTTTAT+AGG + chr1_2:24278399-24278418 Msa0063670:intron 15.0%
!! AGTTATCATTGTATTATTAA+GGG - chr1_2:24278494-24278513 None:intergenic 15.0%
!! AAGTTATCATTGTATTATTA+AGG - chr1_2:24278495-24278514 None:intergenic 15.0%
!!! CATTGTATTTTTTTTTTTTG+AGG - chr1_2:24278521-24278540 None:intergenic 15.0%
!!! ATTTTAACTTTTTCTAATAG+TGG - chr1_2:24279777-24279796 None:intergenic 15.0%
!!! ATCTAACAAATGATTTATTT+TGG - chr1_2:24280042-24280061 None:intergenic 15.0%
!! TTTATTAGATGAAATTTAAG+AGG + chr1_2:24280153-24280172 Msa0063670:intron 15.0%
!! ATTTGTACATTTATTGATAA+TGG + chr1_2:24280586-24280605 Msa0063670:intron 15.0%
!! TTTCTTTAGCTAATATATAT+TGG - chr1_2:24280719-24280738 None:intergenic 15.0%
!! GAATGTAAATATCTTTATAA+AGG + chr1_2:24280977-24280996 Msa0063670:intron 15.0%
!!! TATATATGCTTATTTTTGTT+TGG - chr1_2:24281059-24281078 None:intergenic 15.0%
!!! TTTTATATGTATACGTATAT+TGG + chr1_2:24281384-24281403 Msa0063670:intron 15.0%
!! CAATATGAAACTTAAAATTT+AGG - chr1_2:24281567-24281586 None:intergenic 15.0%
!!! TTTTTGTTTTATAAACCTAT+TGG + chr1_2:24282104-24282123 Msa0063670:intron 15.0%
!! TTCAATGTATTTGATATTAA+GGG - chr1_2:24282166-24282185 None:intergenic 15.0%
!! TTTCAATGTATTTGATATTA+AGG - chr1_2:24282167-24282186 None:intergenic 15.0%
!! AAAATGAAAAGAATGATTAA+GGG - chr1_2:24282477-24282496 None:intergenic 15.0%
!! AAAAATGAAAAGAATGATTA+AGG - chr1_2:24282478-24282497 None:intergenic 15.0%
!!! TCATTTTTTATGAATAAGAA+TGG + chr1_2:24282490-24282509 Msa0063670:intron 15.0%
!! ATTGTATAGTGAAAATTAAG+GGG - chr1_2:24274509-24274528 None:intergenic 20.0%
!!! TTTTGTTGTGTTCAATTTTT+TGG - chr1_2:24274985-24275004 None:intergenic 20.0%
!!! ATTCAAAACCTTTTATATTG+TGG + chr1_2:24275112-24275131 Msa0063670:intron 20.0%
!!! TTTGAATTTTTATGGAACAT+AGG + chr1_2:24275180-24275199 Msa0063670:intron 20.0%
!!! TTTTCATTGGTTAAAAACAA+TGG + chr1_2:24276698-24276717 Msa0063670:intron 20.0%
!! ATACTATATAACGAAATACT+GGG - chr1_2:24276785-24276804 None:intergenic 20.0%
!! TATACTATATAACGAAATAC+TGG - chr1_2:24276786-24276805 None:intergenic 20.0%
!! ATAATATCAGTAAAATTTCG+TGG + chr1_2:24276815-24276834 Msa0063670:intron 20.0%
!!! TTCTTTTTTAGATACTGTAT+TGG + chr1_2:24276901-24276920 Msa0063670:intron 20.0%
!!! TTTGTGGACTATATAATATA+TGG - chr1_2:24277265-24277284 None:intergenic 20.0%
!!! TGTCAAAATTTTTTACAAAG+TGG + chr1_2:24277371-24277390 Msa0063670:intron 20.0%
!! AGAAAATAATAAAATCAGGA+TGG - chr1_2:24277792-24277811 None:intergenic 20.0%
!! TATTTATAGGAACAATGAAT+TGG - chr1_2:24278099-24278118 None:intergenic 20.0%
!! AATTCATTGTTCCTATAAAT+AGG + chr1_2:24278098-24278117 Msa0063670:intron 20.0%
!!! TTTTATAAATTATATGGCTC+AGG - chr1_2:24278236-24278255 None:intergenic 20.0%
!!! TACATTGGTTTTTTTTTTAC+AGG + chr1_2:24278326-24278345 Msa0063670:intron 20.0%
!! AAAAAATGGTCCTATAAAAA+TGG - chr1_2:24278412-24278431 None:intergenic 20.0%
!! GTATCTCGTAATTTAAAAAA+TGG - chr1_2:24278426-24278445 None:intergenic 20.0%
!! ACATAAACATGAGTTATAAT+AGG - chr1_2:24278824-24278843 None:intergenic 20.0%
!! TTATATTAGATGAGTCATAA+GGG - chr1_2:24279155-24279174 None:intergenic 20.0%
!! TATCCTTATATATTCATGTA+CGG + chr1_2:24279180-24279199 Msa0063670:intron 20.0%
!! TTAAAATTACCTGTATGAAA+GGG - chr1_2:24279729-24279748 None:intergenic 20.0%
!!! TTTAAAATTACCTGTATGAA+AGG - chr1_2:24279730-24279749 None:intergenic 20.0%
!!! TTTTTGTCACAATAAATCTT+TGG - chr1_2:24280068-24280087 None:intergenic 20.0%
!! GACAAAAAAGAAAAACTAAA+TGG + chr1_2:24280080-24280099 Msa0063670:intron 20.0%
!!! AAGACAAACAATTTTGTTAA+AGG - chr1_2:24280368-24280387 None:intergenic 20.0%
!! CCTATAATAAGTAACTAATT+AGG - chr1_2:24280616-24280635 None:intergenic 20.0%
!! CCTAATTAGTTACTTATTAT+AGG + chr1_2:24280613-24280632 Msa0063670:intron 20.0%
!!! TTTCTCTAAAAATAACAACA+GGG - chr1_2:24280954-24280973 None:intergenic 20.0%
!!! TTTTCTCTAAAAATAACAAC+AGG - chr1_2:24280955-24280974 None:intergenic 20.0%
!! GGTAGAAGAAAAAAAAATTA+GGG - chr1_2:24281038-24281057 None:intergenic 20.0%
!! TGGTAGAAGAAAAAAAAATT+AGG - chr1_2:24281039-24281058 None:intergenic 20.0%
!! TATTACTACTACACAAAATA+TGG + chr1_2:24281133-24281152 Msa0063670:intron 20.0%
!!! TAGGACTATTTATATTGATT+TGG + chr1_2:24281220-24281239 Msa0063670:intron 20.0%
!! TTGTATTCATAACAAATTGT+GGG - chr1_2:24281662-24281681 None:intergenic 20.0%
!!! TTCTAAGATTACAAATAGAA+TGG + chr1_2:24281775-24281794 Msa0063670:intron 20.0%
!! ATTGTTACATATATGGAAAT+AGG - chr1_2:24281847-24281866 None:intergenic 20.0%
!! AACCTTATCAAATTAATGAA+AGG + chr1_2:24281873-24281892 Msa0063670:intron 20.0%
!!! TTCCTTTCATTAATTTGATA+AGG - chr1_2:24281878-24281897 None:intergenic 20.0%
!! AATAATAGTCAAAGAATAGA+GGG - chr1_2:24282086-24282105 None:intergenic 20.0%
!! AAATAATAGTCAAAGAATAG+AGG - chr1_2:24282087-24282106 None:intergenic 20.0%
!! TGCAAAAATAAGTTATAACA+TGG - chr1_2:24282278-24282297 None:intergenic 20.0%
!!! TGAGAAATATTATACACTTT+TGG - chr1_2:24282529-24282548 None:intergenic 20.0%
!!! GACATATTTTTTCAAATCAT+TGG - chr1_2:24282680-24282699 None:intergenic 20.0%
!! CATAATGTTTATACATACAT+GGG - chr1_2:24283032-24283051 None:intergenic 20.0%
!! ACATAATGTTTATACATACA+TGG - chr1_2:24283033-24283052 None:intergenic 20.0%
! GAATAGATAGTGATGAATAT+AGG - chr1_2:24274565-24274584 None:intergenic 25.0%
! TTGTGTTAGCTATTTATAGA+GGG - chr1_2:24274605-24274624 None:intergenic 25.0%
! ATTTACATGATTCTAAGTTG+CGG + chr1_2:24275010-24275029 Msa0063670:intron 25.0%
! ATATTGCACCACAATATAAA+AGG - chr1_2:24275123-24275142 None:intergenic 25.0%
!! ATTTTTATGGAACATAGGTA+TGG + chr1_2:24275185-24275204 Msa0063670:intron 25.0%
!! GAACCAATTTTTGTACAATT+TGG - chr1_2:24275454-24275473 None:intergenic 25.0%
! AGTAAAATTTATGCACTCTT+TGG + chr1_2:24275561-24275580 Msa0063670:intron 25.0%
!!! TATATAGTATGCTTTTGAAG+TGG + chr1_2:24275625-24275644 Msa0063670:intron 25.0%
!! TTTTGGTGAAATAAAAGAGA+TGG + chr1_2:24275661-24275680 Msa0063670:CDS 25.0%
! TGAAATAAAAGAGATGGAAA+TGG + chr1_2:24275667-24275686 Msa0063670:CDS 25.0%
!!! TCTTTTTTCTCTCTTTTCAT+TGG + chr1_2:24276685-24276704 Msa0063670:intron 25.0%
! TACTATATAACGAAATACTG+GGG - chr1_2:24276784-24276803 None:intergenic 25.0%
! TCTAAAAAAGAAGAGAAATG+TGG - chr1_2:24276893-24276912 None:intergenic 25.0%
! AATGTGTAAAAAGAAGAGTA+TGG - chr1_2:24276943-24276962 None:intergenic 25.0%
! TTATATAGTCCACAAAAGTT+TGG + chr1_2:24277269-24277288 Msa0063670:intron 25.0%
! TGTAATATACAGACATATAG+TGG - chr1_2:24277486-24277505 None:intergenic 25.0%
!!! CCATTTTTATATATGCATCA+AGG - chr1_2:24278136-24278155 None:intergenic 25.0%
! CCTTGATGCATATATAAAAA+TGG + chr1_2:24278133-24278152 Msa0063670:intron 25.0%
! CGATAATATGCATTAGAATT+TGG + chr1_2:24278617-24278636 Msa0063670:intron 25.0%
! GTTATATTAGATGAGTCATA+AGG - chr1_2:24279156-24279175 None:intergenic 25.0%
! ATTCCGTACATGAATATATA+AGG - chr1_2:24279186-24279205 None:intergenic 25.0%
! CATATAAGGTTATAGATCAA+TGG + chr1_2:24279296-24279315 Msa0063670:intron 25.0%
! TCATATCATAGAAGATGAAA+GGG - chr1_2:24279346-24279365 None:intergenic 25.0%
! TTCATATCATAGAAGATGAA+AGG - chr1_2:24279347-24279366 None:intergenic 25.0%
! GAGAAATGAATATTTGTACT+AGG - chr1_2:24279448-24279467 None:intergenic 25.0%
! GTTGCTATAGCTATATATAT+TGG + chr1_2:24279540-24279559 Msa0063670:intron 25.0%
! CTAATAGTGGTATAGTAATT+TGG - chr1_2:24279764-24279783 None:intergenic 25.0%
! AAAATAATTGTACCAAACGT+TGG + chr1_2:24279792-24279811 Msa0063670:intron 25.0%
!!! AGTAATTGATTCGTTAAACT+TGG - chr1_2:24279872-24279891 None:intergenic 25.0%
!! TTTAACATCTCCAATTTTTG+TGG + chr1_2:24280117-24280136 Msa0063670:intron 25.0%
!! CAAACAATTTTGTTAAAGGT+AGG - chr1_2:24280364-24280383 None:intergenic 25.0%
! TTTAAGCTAAATCACTTGAT+TGG - chr1_2:24280395-24280414 None:intergenic 25.0%
!!! TTAACGAACGATTTGTTTTA+AGG - chr1_2:24280431-24280450 None:intergenic 25.0%
! CGTTCGTTAAAACTTTAATT+TGG + chr1_2:24280441-24280460 Msa0063670:intron 25.0%
! ATTCATTCAACTACAATACA+AGG - chr1_2:24280671-24280690 None:intergenic 25.0%
! GAATGAATATACATCTTTCT+TGG + chr1_2:24280683-24280702 Msa0063670:intron 25.0%
! TTGGTGTAATGTTAAAAAGA+CGG + chr1_2:24280899-24280918 Msa0063670:intron 25.0%
!! TATAAAGGTCTCTTTTACTT+TGG + chr1_2:24280992-24281011 Msa0063670:intron 25.0%
! GAAAAAAAAATTAGGGTGAA+AGG - chr1_2:24281031-24281050 None:intergenic 25.0%
! ATATTTAAGCAAAATATGCC+TGG + chr1_2:24281097-24281116 Msa0063670:intron 25.0%
!!! TTGCTTTAAGATTAGGTTTT+AGG + chr1_2:24281201-24281220 Msa0063670:intron 25.0%
! CATAGAAAATATAGATGAGA+GGG - chr1_2:24281486-24281505 None:intergenic 25.0%
! TCATAGAAAATATAGATGAG+AGG - chr1_2:24281487-24281506 None:intergenic 25.0%
!! TCTCATCTATATTTTCTATG+AGG + chr1_2:24281486-24281505 Msa0063670:intron 25.0%
!! TCTATATTTTCTATGAGGAT+TGG + chr1_2:24281491-24281510 Msa0063670:intron 25.0%
! CTTGTATTCATAACAAATTG+TGG - chr1_2:24281663-24281682 None:intergenic 25.0%
!!! ATCTACAAAAGAAAGTGTTA+GGG - chr1_2:24281691-24281710 None:intergenic 25.0%
!!! TATCTACAAAAGAAAGTGTT+AGG - chr1_2:24281692-24281711 None:intergenic 25.0%
! TGTCTCAATTGTTACATATA+TGG - chr1_2:24281854-24281873 None:intergenic 25.0%
! ATAATAGTCAAAGAATAGAG+GGG - chr1_2:24282085-24282104 None:intergenic 25.0%
! AAGTTATAACATGGAAAAGA+GGG - chr1_2:24282269-24282288 None:intergenic 25.0%
! TAAGTTATAACATGGAAAAG+AGG - chr1_2:24282270-24282289 None:intergenic 25.0%
!! TTTCTTTCTTAGATTTTCTC+CGG - chr1_2:24282408-24282427 None:intergenic 25.0%
! TGAATAAGAATGGAGTAAAA+AGG + chr1_2:24282500-24282519 Msa0063670:intron 25.0%
! AAGAAAACGATTAATACTAC+AGG - chr1_2:24282556-24282575 None:intergenic 25.0%
! TTATCCATTCAAAATACAAG+AGG + chr1_2:24282634-24282653 Msa0063670:intron 25.0%
!!! TTCTTTAGAGTTATCTTTAC+TGG - chr1_2:24282837-24282856 None:intergenic 25.0%
! ATGCAATTTGTAACATGTTT+AGG + chr1_2:24282897-24282916 Msa0063670:three_prime_UTR 25.0%
TTAGGAAAATGTTTCATAGG+TGG - chr1_2:24274433-24274452 None:intergenic 30.0%
TGCTTAGGAAAATGTTTCAT+AGG - chr1_2:24274436-24274455 None:intergenic 30.0%
CTGAGAAATATGTACTATAC+AGG - chr1_2:24274470-24274489 None:intergenic 30.0%
TAGCTATTTATAGAGGGAAA+GGG - chr1_2:24274599-24274618 None:intergenic 30.0%
TTAGCTATTTATAGAGGGAA+AGG - chr1_2:24274600-24274619 None:intergenic 30.0%
GTTGTGTTAGCTATTTATAG+AGG - chr1_2:24274606-24274625 None:intergenic 30.0%
CAAAACAATAAGGTGAAAGA+TGG - chr1_2:24274631-24274650 None:intergenic 30.0%
GTTGAGTGTACAAAACAATA+AGG - chr1_2:24274641-24274660 None:intergenic 30.0%
AGAGGAGCAATATAATGAAA+GGG - chr1_2:24274724-24274743 None:intergenic 30.0%
AAGAGGAGCAATATAATGAA+AGG - chr1_2:24274725-24274744 None:intergenic 30.0%
AAGGAAGGATAGTAAAAAAG+AGG - chr1_2:24274742-24274761 None:intergenic 30.0%
AACATTTGTCTTTGTCTCTA+TGG - chr1_2:24274784-24274803 None:intergenic 30.0%
!! GTTTTGAGTATAGAGTTTGA+GGG - chr1_2:24274846-24274865 None:intergenic 30.0%
TTGTGGAGAAGAAAGAATTT+GGG - chr1_2:24274868-24274887 None:intergenic 30.0%
ATATTCAAGACACACATACT+AGG + chr1_2:24275212-24275231 Msa0063670:CDS 30.0%
GGACCAAATTGTACAAAAAT+TGG + chr1_2:24275448-24275467 Msa0063670:CDS 30.0%
! TACAAAAATTGGTTCCAACT+TGG + chr1_2:24275459-24275478 Msa0063670:CDS 30.0%
! ACAAAAATTGGTTCCAACTT+GGG + chr1_2:24275460-24275479 Msa0063670:CDS 30.0%
AAGAGAATTGTATCATTGCT+TGG + chr1_2:24275697-24275716 Msa0063670:CDS 30.0%
TTACACAATGATGCATCTAA+TGG - chr1_2:24275822-24275841 None:intergenic 30.0%
CCAATTAAACCATGATTTAG+CGG - chr1_2:24275919-24275938 None:intergenic 30.0%
GGTGAAATGAATATTGATGA+AGG + chr1_2:24276232-24276251 Msa0063670:intron 30.0%
AATGAATATTGATGAAGGCA+AGG + chr1_2:24276237-24276256 Msa0063670:intron 30.0%
!!! AGGTTTTGAATGAGAGTATA+AGG + chr1_2:24276261-24276280 Msa0063670:CDS 30.0%
!! TTTTGAATGAGAGTATAAGG+AGG + chr1_2:24276264-24276283 Msa0063670:CDS 30.0%
TCATCAAAAGTTGTCTCAAA+TGG - chr1_2:24276660-24276679 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG + chr1_2:24276711-24276730 Msa0063670:intron 30.0%
ACTATATAACGAAATACTGG+GGG - chr1_2:24276783-24276802 None:intergenic 30.0%
! ACAATTATTGATAATTGGCC+TGG - chr1_2:24277230-24277249 None:intergenic 30.0%
AAAAAGATAGTGCACTTTCA+AGG + chr1_2:24277427-24277446 Msa0063670:intron 30.0%
! AAATAAGAAGCAAACTTGCT+AGG + chr1_2:24277857-24277876 Msa0063670:CDS 30.0%
!! AATAAGAAGCAAACTTGCTA+GGG + chr1_2:24277858-24277877 Msa0063670:CDS 30.0%
! TTTTAGATGTAATGTCCAAC+AGG + chr1_2:24278007-24278026 Msa0063670:intron 30.0%
!!! TTTTTTTTGAACAAGCCTGT+TGG - chr1_2:24278025-24278044 None:intergenic 30.0%
TTGACAAAGTCAATGTACAT+TGG + chr1_2:24278565-24278584 Msa0063670:intron 30.0%
TTGTTTCGTAAGATTGAGTT+AGG - chr1_2:24278780-24278799 None:intergenic 30.0%
CACTAACAACCAAGTAAAAT+GGG + chr1_2:24278926-24278945 Msa0063670:intron 30.0%
! TGATGAATACTTCTAAAGAG+TGG - chr1_2:24279069-24279088 None:intergenic 30.0%
TTCTTACCTCAAATCTTGAA+GGG - chr1_2:24279128-24279147 None:intergenic 30.0%
ATTCTTACCTCAAATCTTGA+AGG - chr1_2:24279129-24279148 None:intergenic 30.0%
TCCTTTGTCAGAAACATATA+AGG + chr1_2:24279282-24279301 Msa0063670:intron 30.0%
! ACCTTATATGTTTCTGACAA+AGG - chr1_2:24279286-24279305 None:intergenic 30.0%
AACATTGAATCACCTATCTA+GGG - chr1_2:24279375-24279394 None:intergenic 30.0%
AAACATTGAATCACCTATCT+AGG - chr1_2:24279376-24279395 None:intergenic 30.0%
ACCAATACCATTAAGACATT+AGG + chr1_2:24279566-24279585 Msa0063670:intron 30.0%
CCAATACCATTAAGACATTA+GGG + chr1_2:24279567-24279586 Msa0063670:intron 30.0%
! GACTTAATTGGTTTATGTGA+TGG + chr1_2:24279592-24279611 Msa0063670:intron 30.0%
! ACATATATGCCATTTGGAAA+TGG + chr1_2:24279638-24279657 Msa0063670:CDS 30.0%
AAGAATTAAACACCAACGTT+TGG - chr1_2:24279807-24279826 None:intergenic 30.0%
!!! GTCTCAAACTATTTTTGAGT+TGG + chr1_2:24279899-24279918 Msa0063670:intron 30.0%
! TCACTTGCTTATATCCATTT+TGG - chr1_2:24279953-24279972 None:intergenic 30.0%
ATGGATATAAGCAAGTGATT+TGG + chr1_2:24279955-24279974 Msa0063670:intron 30.0%
GTTGAGATATCCACAAAAAT+TGG - chr1_2:24280130-24280149 None:intergenic 30.0%
TTTCATCATCGTTTACTTTC+TGG - chr1_2:24280209-24280228 None:intergenic 30.0%
! CTTATCTCTCAAGCTTTTAT+TGG + chr1_2:24280243-24280262 Msa0063670:intron 30.0%
AGGGATTTATTAAACTGTTG+AGG - chr1_2:24280288-24280307 None:intergenic 30.0%
! TACTAATTGTATTGGTGTAG+TGG - chr1_2:24280312-24280331 None:intergenic 30.0%
!! AAAATTAGTTTGTCTCCTAG+TGG + chr1_2:24280538-24280557 Msa0063670:intron 30.0%
!! AAATTAGTTTGTCTCCTAGT+GGG + chr1_2:24280539-24280558 Msa0063670:intron 30.0%
ATTCAACTACAATACAAGGA+AGG - chr1_2:24280667-24280686 None:intergenic 30.0%
AAGAAAATAGTGTGTAGAGT+CGG + chr1_2:24280733-24280752 Msa0063670:intron 30.0%
GAAATACATGATCATTGATG+AGG - chr1_2:24280761-24280780 None:intergenic 30.0%
TTGCTACTGACCAAAAAAAT+AGG + chr1_2:24280857-24280876 Msa0063670:intron 30.0%
!!! GATCTATACGCCTATTTTTT+TGG - chr1_2:24280870-24280889 None:intergenic 30.0%
TTAACATTACACCAAGACTT+TGG - chr1_2:24280894-24280913 None:intergenic 30.0%
! TAATAAGAACAAGTTGAACC+AGG - chr1_2:24281118-24281137 None:intergenic 30.0%
AATCTTAAAGCAAAGAACAC+TGG - chr1_2:24281194-24281213 None:intergenic 30.0%
!! GTGTTCTTTGCTTTAAGATT+AGG + chr1_2:24281194-24281213 Msa0063670:intron 30.0%
TTAGTTAAGTGGCTACAAAA+AGG - chr1_2:24281335-24281354 None:intergenic 30.0%
! TTTGAGTTCACAAGCAAATT+TGG + chr1_2:24281427-24281446 Msa0063670:intron 30.0%
!! TCTACAAAAGAAAGTGTTAG+GGG - chr1_2:24281690-24281709 None:intergenic 30.0%
ATTAATGAAAGGAATGCTTG+TGG + chr1_2:24281884-24281903 Msa0063670:intron 30.0%
TGCAATTGCAAAATACCAAT+AGG - chr1_2:24282122-24282141 None:intergenic 30.0%
AACCATTCAAATGCTTGAAA+TGG - chr1_2:24282232-24282251 None:intergenic 30.0%
GGAAAAGAGGGATATAAATT+TGG - chr1_2:24282257-24282276 None:intergenic 30.0%
ATTAGTATAGTATGAGACAG+AGG + chr1_2:24282602-24282621 Msa0063670:intron 30.0%
AATGGAGATGGAATTCAATA+TGG + chr1_2:24282783-24282802 Msa0063670:CDS 30.0%
! TTTACTGGTAATCCATGTTT+TGG - chr1_2:24282822-24282841 None:intergenic 30.0%
! GAGATTCTTTTCCCATTTAT+AGG + chr1_2:24282962-24282981 Msa0063670:three_prime_UTR 30.0%
ATGTTTCATAGGTGGCAAAA+GGG - chr1_2:24274425-24274444 None:intergenic 35.0%
AATGTTTCATAGGTGGCAAA+AGG - chr1_2:24274426-24274445 None:intergenic 35.0%
! TAGTGAAAATTAAGGGGTGT+CGG - chr1_2:24274503-24274522 None:intergenic 35.0%
AACAATAAGGTGAAAGATGG+CGG - chr1_2:24274628-24274647 None:intergenic 35.0%
AAGTGATGTGAAGAATTGCA+TGG - chr1_2:24274675-24274694 None:intergenic 35.0%
!!! GGTTTTGAGTATAGAGTTTG+AGG - chr1_2:24274847-24274866 None:intergenic 35.0%
CTTGTGGAGAAGAAAGAATT+TGG - chr1_2:24274869-24274888 None:intergenic 35.0%
CAAATTCTTTCTTCTCCACA+AGG + chr1_2:24274867-24274886 Msa0063670:CDS 35.0%
! TTAATACCTTTTCTGCCTTG+TGG - chr1_2:24274885-24274904 None:intergenic 35.0%
CAAGCAAAGAGAAGATGATA+GGG + chr1_2:24275321-24275340 Msa0063670:CDS 35.0%
TGTTGAAAGAACAAAGCTTC+TGG - chr1_2:24275347-24275366 None:intergenic 35.0%
!! GAAGCTTTGTTCTTTCAACA+AGG + chr1_2:24275347-24275366 Msa0063670:CDS 35.0%
AAGTGTGGAAGGTAAAAAAG+AGG - chr1_2:24275408-24275427 None:intergenic 35.0%
!!! ACAGAGTTTTTAAGTGTGGA+AGG - chr1_2:24275419-24275438 None:intergenic 35.0%
!!! AGAGACAGAGTTTTTAAGTG+TGG - chr1_2:24275423-24275442 None:intergenic 35.0%
TAAAAACTCTGTCTCTCATG+TGG + chr1_2:24275427-24275446 Msa0063670:CDS 35.0%
!! AACCTTTTTCATCTCTTGCA+AGG - chr1_2:24275504-24275523 None:intergenic 35.0%
ATTGTATCATTGCTTGGAGA+AGG + chr1_2:24275703-24275722 Msa0063670:CDS 35.0%
TTGTATCATTGCTTGGAGAA+GGG + chr1_2:24275704-24275723 Msa0063670:CDS 35.0%
!! TTCTTATTGGAAGGCATTGA+AGG + chr1_2:24275760-24275779 Msa0063670:CDS 35.0%
CCGCTAAATCATGGTTTAAT+TGG + chr1_2:24275916-24275935 Msa0063670:intron 35.0%
GTCAATTCAACTAGTTGAAC+TGG + chr1_2:24276128-24276147 Msa0063670:intron 35.0%
AATATTGATGAAGGCAAGGA+AGG + chr1_2:24276241-24276260 Msa0063670:intron 35.0%
TAGAAAGAAGAAATGAGAGC+AGG + chr1_2:24276291-24276310 Msa0063670:CDS 35.0%
AGAAATGAGAGCAGGAATTA+TGG + chr1_2:24276299-24276318 Msa0063670:CDS 35.0%
TTGTTAGGAATTCTGTTGAG+AGG + chr1_2:24276329-24276348 Msa0063670:CDS 35.0%
AGAGAAAAAGGAAGAAACAG+TGG + chr1_2:24276723-24276742 Msa0063670:intron 35.0%
! TTTAGATACTGTATTGGTCG+CGG + chr1_2:24276907-24276926 Msa0063670:intron 35.0%
! ATTATTGATAATTGGCCTGG+TGG - chr1_2:24277227-24277246 None:intergenic 35.0%
GATCTTGAGGTAAATTGTTG+GGG - chr1_2:24277298-24277317 None:intergenic 35.0%
GGATCTTGAGGTAAATTGTT+GGG - chr1_2:24277299-24277318 None:intergenic 35.0%
GGTAAATAAGTGAGTGTATG+AGG + chr1_2:24277448-24277467 Msa0063670:intron 35.0%
ATACAGACATATAGTGGTCA+AGG - chr1_2:24277480-24277499 None:intergenic 35.0%
! TATTTTACCCTGCTTGTGAA+GGG - chr1_2:24277922-24277941 None:intergenic 35.0%
!! TTATTTTACCCTGCTTGTGA+AGG - chr1_2:24277923-24277942 None:intergenic 35.0%
TGAATTGGTCAGTGTCAATT+TGG - chr1_2:24278084-24278103 None:intergenic 35.0%
CAAAATTTACCAGTGATGAG+AGG + chr1_2:24278654-24278673 Msa0063670:intron 35.0%
CAAAATCCGTTAGATCATCA+TGG - chr1_2:24278720-24278739 None:intergenic 35.0%
GCACTAACAACCAAGTAAAA+TGG + chr1_2:24278925-24278944 Msa0063670:intron 35.0%
AACCAAGTAAAATGGGAATC+AGG + chr1_2:24278933-24278952 Msa0063670:intron 35.0%
! TACCTGATTCCCATTTTACT+TGG - chr1_2:24278938-24278957 None:intergenic 35.0%
TTGCACTTCTTAATGTCTCT+TGG - chr1_2:24278963-24278982 None:intergenic 35.0%
! GAATACTTCTAAAGAGTGGA+AGG - chr1_2:24279065-24279084 None:intergenic 35.0%
! ATTTTCATGTAGCTACCAAG+AGG + chr1_2:24279247-24279266 Msa0063670:intron 35.0%
! TTTTCATGTAGCTACCAAGA+GGG + chr1_2:24279248-24279267 Msa0063670:intron 35.0%
GGATAAAATATAACCCCTCT+TGG - chr1_2:24279265-24279284 None:intergenic 35.0%
ATATGAATCTTCCCCTAGAT+AGG + chr1_2:24279360-24279379 Msa0063670:intron 35.0%
ACATTGAATCACCTATCTAG+GGG - chr1_2:24279374-24279393 None:intergenic 35.0%
CCCTAATGTCTTAATGGTAT+TGG - chr1_2:24279570-24279589 None:intergenic 35.0%
AGTCAACCCTAATGTCTTAA+TGG - chr1_2:24279576-24279595 None:intergenic 35.0%
! GACATTAGGGTTGACTTAAT+TGG + chr1_2:24279580-24279599 Msa0063670:intron 35.0%
CCAAATGGCATATATGTGTT+TGG - chr1_2:24279635-24279654 None:intergenic 35.0%
CCAAACACATATATGCCATT+TGG + chr1_2:24279632-24279651 Msa0063670:CDS 35.0%
! GTGGTATAGTAATTTGGTGA+GGG - chr1_2:24279758-24279777 None:intergenic 35.0%
! AGTGGTATAGTAATTTGGTG+AGG - chr1_2:24279759-24279778 None:intergenic 35.0%
! AGTTGGTTCAGTTCATTATC+AGG + chr1_2:24279916-24279935 Msa0063670:intron 35.0%
!! AGCAAGTGATTTGGTTTAAG+TGG + chr1_2:24279964-24279983 Msa0063670:intron 35.0%
!! CAAGCTTTTATTGGTAGTCA+TGG + chr1_2:24280252-24280271 Msa0063670:intron 35.0%
! ATTGTATTGGTGTAGTGGAA+GGG - chr1_2:24280307-24280326 None:intergenic 35.0%
! AATTGTATTGGTGTAGTGGA+AGG - chr1_2:24280308-24280327 None:intergenic 35.0%
!! AATTAGTTTGTCTCCTAGTG+GGG + chr1_2:24280540-24280559 Msa0063670:intron 35.0%
AGAAAATAGTGTGTAGAGTC+GGG + chr1_2:24280734-24280753 Msa0063670:intron 35.0%
ATTTCATACATACGTGTACG+TGG + chr1_2:24280776-24280795 Msa0063670:intron 35.0%
TGATGTGTTAAGGAAACGTT+TGG - chr1_2:24280824-24280843 None:intergenic 35.0%
ACATGTGCAATGATGTGTTA+AGG - chr1_2:24280834-24280853 None:intergenic 35.0%
! GTCTCTTTTACTTTGGACTA+GGG + chr1_2:24280999-24281018 Msa0063670:intron 35.0%
CCACTTAACTAATGAACCAA+CGG + chr1_2:24281343-24281362 Msa0063670:intron 35.0%
CACTTAACTAATGAACCAAC+GGG + chr1_2:24281344-24281363 Msa0063670:intron 35.0%
!!! GTGAGGTTTTGAGTTATTCT+GGG - chr1_2:24281453-24281472 None:intergenic 35.0%
!!! TGTGAGGTTTTGAGTTATTC+TGG - chr1_2:24281454-24281473 None:intergenic 35.0%
! GTTGTTGGATCGATTTCAAA+TGG - chr1_2:24281631-24281650 None:intergenic 35.0%
TAACAAATTGTGGGTAACTG+TGG - chr1_2:24281653-24281672 None:intergenic 35.0%
TTGACTATACACTAGCATCA+TGG - chr1_2:24281924-24281943 None:intergenic 35.0%
TGTTACAAAGTTGTGTGGTA+AGG - chr1_2:24282023-24282042 None:intergenic 35.0%
CACCATTTCAAGCATTTGAA+TGG + chr1_2:24282227-24282246 Msa0063670:intron 35.0%
!! GTCACCTCTTGTATTTTGAA+TGG - chr1_2:24282641-24282660 None:intergenic 35.0%
!! TGAACTCATCCATGTTTTGA+TGG + chr1_2:24282733-24282752 Msa0063670:intron 35.0%
AAAGCAACACCATCAAAACA+TGG - chr1_2:24282745-24282764 None:intergenic 35.0%
!!! TGTTTTGATGGTGTTGCTTT+AGG + chr1_2:24282745-24282764 Msa0063670:intron 35.0%
TTCAGAAAATGAGAGCAAAG+TGG + chr1_2:24282870-24282889 Msa0063670:three_prime_UTR 35.0%
TCAGAAAATGAGAGCAAAGT+GGG + chr1_2:24282871-24282890 Msa0063670:three_prime_UTR 35.0%
!!! GGAACTAGTTTTGTCTCATT+GGG - chr1_2:24282988-24283007 None:intergenic 35.0%
CTATCCTTCCTTTCCTTCAA+TGG + chr1_2:24274750-24274769 Msa0063670:CDS 40.0%
TGTTTCCACCATTGAAGGAA+AGG - chr1_2:24274761-24274780 None:intergenic 40.0%
TATGGTGTTTCCACCATTGA+AGG - chr1_2:24274766-24274785 None:intergenic 40.0%
AAAGACAAATGTTTACCCCC+TGG + chr1_2:24274791-24274810 Msa0063670:CDS 40.0%
AGTACGTATCTCTCGTTTCA+TGG + chr1_2:24274958-24274977 Msa0063670:intron 40.0%
GTAGTAAAATATGGCCGATG+TGG + chr1_2:24275062-24275081 Msa0063670:intron 40.0%
TACTGCAATTTCGACCACAT+CGG - chr1_2:24275079-24275098 None:intergenic 40.0%
GGACTTGATATCATCACACA+AGG - chr1_2:24275242-24275261 None:intergenic 40.0%
TGTGATGATATCAAGTCCTG+AGG + chr1_2:24275244-24275263 Msa0063670:CDS 40.0%
TCATCTTCTCTTTGCTTGGA+GGG - chr1_2:24275319-24275338 None:intergenic 40.0%
ATCATCTTCTCTTTGCTTGG+AGG - chr1_2:24275320-24275339 None:intergenic 40.0%
CCTATCATCTTCTCTTTGCT+TGG - chr1_2:24275323-24275342 None:intergenic 40.0%
CCAAGCAAAGAGAAGATGAT+AGG + chr1_2:24275320-24275339 Msa0063670:CDS 40.0%
! TTGAACTAGCTTCTTGAGCA+TGG - chr1_2:24275384-24275403 None:intergenic 40.0%
! ATGGTTCTATTAGCCCAAGT+TGG - chr1_2:24275476-24275495 None:intergenic 40.0%
CACCTTGCAAGAGATGAAAA+AGG + chr1_2:24275499-24275518 Msa0063670:CDS 40.0%
!! TCTTATCCTTTGAAGCTCCA+TGG + chr1_2:24275734-24275753 Msa0063670:CDS 40.0%
AGCTCCATGGAACTTCTTAT+TGG + chr1_2:24275747-24275766 Msa0063670:CDS 40.0%
CCTTCCAATAAGAAGTTCCA+TGG - chr1_2:24275754-24275773 None:intergenic 40.0%
CCATGGAACTTCTTATTGGA+AGG + chr1_2:24275751-24275770 Msa0063670:CDS 40.0%
!!! CTTTTGAGACCGCTAAATCA+TGG + chr1_2:24275907-24275926 Msa0063670:intron 40.0%
! AAGATTGAACCGAGTTGAAC+TGG - chr1_2:24276060-24276079 None:intergenic 40.0%
AATGAGAGCAGGAATTATGG+TGG + chr1_2:24276302-24276321 Msa0063670:CDS 40.0%
!! AATTATGGTGGTGGGTTGTT+AGG + chr1_2:24276314-24276333 Msa0063670:CDS 40.0%
! GTACCAACTAACTGATTCTC+AGG + chr1_2:24276370-24276389 Msa0063670:CDS 40.0%
CAGGTGGCTGATAATATCAT+TGG + chr1_2:24276389-24276408 Msa0063670:CDS 40.0%
CACAGCTAGTGTTCTAACAT+GGG + chr1_2:24276436-24276455 Msa0063670:CDS 40.0%
GCATGACAATGTCAATCTCT+TGG + chr1_2:24276472-24276491 Msa0063670:CDS 40.0%
GAAAAAGGAAGAAACAGTGG+CGG + chr1_2:24276726-24276745 Msa0063670:intron 40.0%
GTAAAATTTCGTGGTTGCAG+TGG + chr1_2:24276824-24276843 Msa0063670:intron 40.0%
! TTAGATACTGTATTGGTCGC+GGG + chr1_2:24276908-24276927 Msa0063670:intron 40.0%
! AACGTGCTTTTGTGCTTTTG+AGG + chr1_2:24277121-24277140 Msa0063670:intron 40.0%
! ACGTGCTTTTGTGCTTTTGA+GGG + chr1_2:24277122-24277141 Msa0063670:intron 40.0%
CGGATCTTGAGGTAAATTGT+TGG - chr1_2:24277300-24277319 None:intergenic 40.0%
GTGTCAGTTGACAAATCTGT+TGG - chr1_2:24278058-24278077 None:intergenic 40.0%
! GTCAATGTACATTGGCTAAG+AGG + chr1_2:24278573-24278592 Msa0063670:intron 40.0%
! TGGTATCCGGTTTTCACTAT+CGG - chr1_2:24278700-24278719 None:intergenic 40.0%
CGTTAGATCATCATGGTATC+CGG - chr1_2:24278713-24278732 None:intergenic 40.0%
CGGATACCATGATGATCTAA+CGG + chr1_2:24278711-24278730 Msa0063670:intron 40.0%
TAGAGAAGCAGTTAGAGATG+TGG + chr1_2:24279002-24279021 Msa0063670:CDS 40.0%
CAAGGTTACTCCATTCCAAA+AGG + chr1_2:24279030-24279049 Msa0063670:CDS 40.0%
GTTACTCCATTCCAAAAGGT+TGG + chr1_2:24279034-24279053 Msa0063670:CDS 40.0%
!! GACTTTCCAACCTTTTGGAA+TGG - chr1_2:24279043-24279062 None:intergenic 40.0%
GTTTGACCCTTCAAGATTTG+AGG + chr1_2:24279119-24279138 Msa0063670:CDS 40.0%
TTTCATGTAGCTACCAAGAG+GGG + chr1_2:24279249-24279268 Msa0063670:intron 40.0%
ATATATGTGTTTGGTCGAGG+TGG - chr1_2:24279626-24279645 None:intergenic 40.0%
AACCAAACGAATCGAACTTG+AGG - chr1_2:24279843-24279862 None:intergenic 40.0%
AGGTCTACTAGACACCAAAA+TGG + chr1_2:24279936-24279955 Msa0063670:intron 40.0%
GGATAGTGTTCCTTAAGATG+TGG + chr1_2:24280634-24280653 Msa0063670:intron 40.0%
TGTTCCTTAAGATGTGGAAG+TGG + chr1_2:24280640-24280659 Msa0063670:intron 40.0%
CGTATAGATCTCCAAAGTCT+TGG + chr1_2:24280880-24280899 Msa0063670:intron 40.0%
AAGACGGTCTTAAATTCGAG+AGG + chr1_2:24280915-24280934 Msa0063670:intron 40.0%
! GGTCTCTTTTACTTTGGACT+AGG + chr1_2:24280998-24281017 Msa0063670:intron 40.0%
!! CCGTTGGTTCATTAGTTAAG+TGG - chr1_2:24281346-24281365 None:intergenic 40.0%
ACTCAAAACCTCACACTAGT+AGG + chr1_2:24281459-24281478 Msa0063670:intron 40.0%
!!! TTTTCTATGAGGATTGGCTG+CGG + chr1_2:24281497-24281516 Msa0063670:intron 40.0%
! TGGTGTCGAGTTAAACTTGT+TGG - chr1_2:24281955-24281974 None:intergenic 40.0%
AAAGTTGTGTGGTAAGGACA+TGG - chr1_2:24282017-24282036 None:intergenic 40.0%
CCTTGTGTTACAAAGTTGTG+TGG - chr1_2:24282028-24282047 None:intergenic 40.0%
CCACACAACTTTGTAACACA+AGG + chr1_2:24282025-24282044 Msa0063670:intron 40.0%
!! TTTGATGGTGTTGCTTTAGG+TGG + chr1_2:24282748-24282767 Msa0063670:intron 40.0%
CAGAAAATGAGAGCAAAGTG+GGG + chr1_2:24282872-24282891 Msa0063670:three_prime_UTR 40.0%
GTCTCATTGGGCCTATAAAT+GGG - chr1_2:24282976-24282995 None:intergenic 40.0%
TGTCTCATTGGGCCTATAAA+TGG - chr1_2:24282977-24282996 None:intergenic 40.0%
!!! GGGAACTAGTTTTGTCTCAT+TGG - chr1_2:24282989-24283008 None:intergenic 40.0%
GAGACAAAACTAGTTCCCAT+TGG + chr1_2:24282991-24283010 Msa0063670:three_prime_UTR 40.0%
ATAGGTGGCAAAAGGGAGTT+GGG - chr1_2:24274418-24274437 None:intergenic 45.0%
GAGGGAAAGGGAATGAGAAT+TGG - chr1_2:24274587-24274606 None:intergenic 45.0%
TCCTTCCTTTCCTTCAATGG+TGG + chr1_2:24274753-24274772 Msa0063670:CDS 45.0%
TCCACCATTGAAGGAAAGGA+AGG - chr1_2:24274757-24274776 None:intergenic 45.0%
ATGTTTACCCCCTGGTTCAA+TGG + chr1_2:24274799-24274818 Msa0063670:CDS 45.0%
TGTTTACCCCCTGGTTCAAT+GGG + chr1_2:24274800-24274819 Msa0063670:CDS 45.0%
TTGAGGGTCTCTCCAAAGTA+AGG - chr1_2:24274830-24274849 None:intergenic 45.0%
TCTTCTCCACAAGGCAGAAA+AGG + chr1_2:24274876-24274895 Msa0063670:CDS 45.0%
! TCTTTGCTTGGAGGGTATGT+TGG - chr1_2:24275311-24275330 None:intergenic 45.0%
!! CATCTCTTGCAAGGTGTTGA+TGG - chr1_2:24275495-24275514 None:intergenic 45.0%
! GTGGCTGCAAATTCAGCTTT+TGG + chr1_2:24275644-24275663 Msa0063670:CDS 45.0%
GAAGTTCCATGGAGCTTCAA+AGG - chr1_2:24275743-24275762 None:intergenic 45.0%
! TGAACTGGTCTAACTGCAGT+TGG - chr1_2:24276045-24276064 None:intergenic 45.0%
GCAGTTAGACCAGTTCAACT+CGG + chr1_2:24276048-24276067 Msa0063670:intron 45.0%
AGAGCAGGAATTATGGTGGT+GGG + chr1_2:24276306-24276325 Msa0063670:CDS 45.0%
GGAATTCTGTTGAGAGGCAA+AGG + chr1_2:24276335-24276354 Msa0063670:CDS 45.0%
CCACCTGAGAATCAGTTAGT+TGG - chr1_2:24276376-24276395 None:intergenic 45.0%
! CCAACTAACTGATTCTCAGG+TGG + chr1_2:24276373-24276392 Msa0063670:CDS 45.0%
CCATGTTAGAACACTAGCTG+TGG - chr1_2:24276438-24276457 None:intergenic 45.0%
CCACAGCTAGTGTTCTAACA+TGG + chr1_2:24276435-24276454 Msa0063670:CDS 45.0%
ATTTCGTGGTTGCAGTGGAA+CGG + chr1_2:24276829-24276848 Msa0063670:intron 45.0%
CCATAAGTTGCTGAAGGTTG+CGG + chr1_2:24276857-24276876 Msa0063670:intron 45.0%
CATAAGTTGCTGAAGGTTGC+GGG + chr1_2:24276858-24276877 Msa0063670:intron 45.0%
! AGCGTGCTTTTGTGCTTTTG+AGG + chr1_2:24276996-24277015 Msa0063670:intron 45.0%
! GCGTGCTTTTGTGCTTTTGA+GGG + chr1_2:24276997-24277016 Msa0063670:intron 45.0%
! CGTGCTTTTGTGCTTTTGAG+GGG + chr1_2:24276998-24277017 Msa0063670:intron 45.0%
! AGCGTGCTTTTGTGCTTTTG+AGG + chr1_2:24276996-24277015 Msa0063670:intron 45.0%
! GCGTGCTTTTGTGCTTTTGA+GGG + chr1_2:24276997-24277016 Msa0063670:intron 45.0%
! CGTGCTTTTGTGCTTTTGAG+GGG + chr1_2:24276998-24277017 Msa0063670:intron 45.0%
!! GTGCTTTTGTGCTTTTGAGG+GGG + chr1_2:24276999-24277018 Msa0063670:intron 45.0%
!! TGCTTTTGTGCTTTTGAGGG+GGG + chr1_2:24277000-24277019 Msa0063670:intron 45.0%
! CGTGCTTTTGTGCTTTTGAG+GGG + chr1_2:24276998-24277017 Msa0063670:intron 45.0%
! AGCGTGCTTTTGTGCTTTTG+AGG + chr1_2:24276996-24277015 Msa0063670:intron 45.0%
! GCGTGCTTTTGTGCTTTTGA+GGG + chr1_2:24276997-24277016 Msa0063670:intron 45.0%
! CGTGCTTTTGTGCTTTTGAG+GGG + chr1_2:24276998-24277017 Msa0063670:intron 45.0%
!! GTGCTTTTGTGCTTTTGAGG+GGG + chr1_2:24276999-24277018 Msa0063670:intron 45.0%
!! TGCTTTTGTGCTTTTGAGGG+GGG + chr1_2:24277000-24277019 Msa0063670:intron 45.0%
!! CATGTTCCATTGCTGTTTCC+AGG + chr1_2:24277192-24277211 Msa0063670:intron 45.0%
AGATTGCCTGGAAACAGCAA+TGG - chr1_2:24277201-24277220 None:intergenic 45.0%
! TTGGGGATGCCAAACTTTTG+TGG - chr1_2:24277281-24277300 None:intergenic 45.0%
CTTATTCTCTCTCTTCCCAG+TGG - chr1_2:24277323-24277342 None:intergenic 45.0%
CTGGGAAGAGAGAGAATAAG+AGG + chr1_2:24277323-24277342 Msa0063670:intron 45.0%
!! AAACTTGCTAGGGAATGTCG+TGG + chr1_2:24277868-24277887 Msa0063670:CDS 45.0%
GGAATGTCGTGGACTTTCAT+GGG + chr1_2:24277879-24277898 Msa0063670:CDS 45.0%
AGGAAAACTCCTCTCATCAC+TGG - chr1_2:24278666-24278685 None:intergenic 45.0%
! GAGGAGTTTTCCTACTAGTG+TGG + chr1_2:24278673-24278692 Msa0063670:intron 45.0%
TGTGGTCCGATAGTGAAAAC+CGG + chr1_2:24278691-24278710 Msa0063670:intron 45.0%
GTTAGAGATGTGGAGCTACA+AGG + chr1_2:24279012-24279031 Msa0063670:CDS 45.0%
! GGAAGGACTTTCCAACCTTT+TGG - chr1_2:24279048-24279067 None:intergenic 45.0%
TGTGGTTGAGGGAAGAAATG+AGG - chr1_2:24279096-24279115 None:intergenic 45.0%
GGTCAAACTTGTGTGGTTGA+GGG - chr1_2:24279107-24279126 None:intergenic 45.0%
CTTGAAGGGTCAAACTTGTG+TGG - chr1_2:24279114-24279133 None:intergenic 45.0%
GGCATATATGTGTTTGGTCG+AGG - chr1_2:24279629-24279648 None:intergenic 45.0%
! GAGTGGACTCCATTTCCAAA+TGG - chr1_2:24279650-24279669 None:intergenic 45.0%
!! TAGTGAGCTTGCTAAGCTTG+AGG + chr1_2:24279679-24279698 Msa0063670:CDS 45.0%
ATGAAAGGGTGAGATGGTGA+AGG - chr1_2:24279715-24279734 None:intergenic 45.0%
ACCATCTCACCCTTTCATAC+AGG + chr1_2:24279717-24279736 Msa0063670:CDS 45.0%
ACCTGTATGAAAGGGTGAGA+TGG - chr1_2:24279721-24279740 None:intergenic 45.0%
! CACCTCAAGTTCGATTCGTT+TGG + chr1_2:24279838-24279857 Msa0063670:intron 45.0%
GATCGAACTTCGCATCAGTA+GGG + chr1_2:24280484-24280503 Msa0063670:intron 45.0%
AGGACCACTTCCACATCTTA+AGG - chr1_2:24280647-24280666 None:intergenic 45.0%
TTGTGGGTAACTGTGGTTGT+TGG - chr1_2:24281646-24281665 None:intergenic 45.0%
AAGGAATGCTTGTGGAACCA+AGG + chr1_2:24281892-24281911 Msa0063670:intron 45.0%
TAGCATCATGGAGTTTGCCT+TGG - chr1_2:24281912-24281931 None:intergenic 45.0%
TGATTGTGCAGAGCTACATG+TGG - chr1_2:24281975-24281994 None:intergenic 45.0%
GGACATGGTGAAATGTAGTG+TGG - chr1_2:24282002-24282021 None:intergenic 45.0%
!! GTGACGGAGAGACTAAGTTT+TGG - chr1_2:24282376-24282395 None:intergenic 45.0%
! TTGCTTTAGGTGGCAAGTTG+TGG + chr1_2:24282758-24282777 Msa0063670:intron 45.0%
! TGCTTTAGGTGGCAAGTTGT+GGG + chr1_2:24282759-24282778 Msa0063670:intron 45.0%
CAAGTTGTGGGAAATGGAGA+TGG + chr1_2:24282771-24282790 Msa0063670:CDS 45.0%
!!! CCATGTTTTGGCACAGGAAA+CGG - chr1_2:24282810-24282829 None:intergenic 45.0%
!!! GGTAATCCATGTTTTGGCAC+AGG - chr1_2:24282816-24282835 None:intergenic 45.0%
CCATGCATAATGCAGCCAAT+GGG - chr1_2:24283009-24283028 None:intergenic 45.0%
!!! TTAATTGTTTATTTATTTTT+TGG + chr1_2:24276211-24276230 Msa0063670:intron 5.0%
!!! TATTATTTTATTTTTTTTGA+AGG - chr1_2:24281807-24281826 None:intergenic 5.0%
!! AAAAAAATAAAATAATAGAA+TGG + chr1_2:24281810-24281829 Msa0063670:intron 5.0%
!!! TTAAAATATTCTTTTAAATT+TGG - chr1_2:24282197-24282216 None:intergenic 5.0%
CATAGGTGGCAAAAGGGAGT+TGG - chr1_2:24274419-24274438 None:intergenic 50.0%
!! TCAATGGGCTGGCCTTACTT+TGG + chr1_2:24274815-24274834 Msa0063670:CDS 50.0%
GAGAGCAGGAATTATGGTGG+TGG + chr1_2:24276305-24276324 Msa0063670:CDS 50.0%
!! AGAAACAGTGGCGGATCTCT+TGG + chr1_2:24276735-24276754 Msa0063670:intron 50.0%
TTTCGTGGTTGCAGTGGAAC+GGG + chr1_2:24276830-24276849 Msa0063670:intron 50.0%
CCGCAACCTTCAGCAACTTA+TGG - chr1_2:24276860-24276879 None:intergenic 50.0%
!! GCTTTTGTGCTTTTGAGGGG+GGG + chr1_2:24277001-24277020 Msa0063670:intron 50.0%
TCCAGGCAATCTATACCACC+AGG + chr1_2:24277209-24277228 Msa0063670:intron 50.0%
TTTACCTCAAGATCCGCCAC+TGG + chr1_2:24277304-24277323 Msa0063670:intron 50.0%
TTACCTCAAGATCCGCCACT+GGG + chr1_2:24277305-24277324 Msa0063670:intron 50.0%
ATTCTCTCTCTTCCCAGTGG+CGG - chr1_2:24277320-24277339 None:intergenic 50.0%
TGTCAACTGAGCTATGCTCG+AGG + chr1_2:24277507-24277526 Msa0063670:intron 50.0%
GGGAATGTCGTGGACTTTCA+TGG + chr1_2:24277878-24277897 Msa0063670:CDS 50.0%
ATGTCGTGGACTTTCATGGG+AGG + chr1_2:24277882-24277901 Msa0063670:CDS 50.0%
GACTTTCATGGGAGGATACC+AGG + chr1_2:24277890-24277909 Msa0063670:CDS 50.0%
TATGGCTCAGGAGCTTAGCT+AGG - chr1_2:24278224-24278243 None:intergenic 50.0%
CACTATCGGACCACACTAGT+AGG - chr1_2:24278686-24278705 None:intergenic 50.0%
GGGTCAAACTTGTGTGGTTG+AGG - chr1_2:24279108-24279127 None:intergenic 50.0%
AATGGAGTCCACTCTTGTCC+TGG + chr1_2:24279656-24279675 Msa0063670:CDS 50.0%
AGCTTAGCAAGCTCACTACC+AGG - chr1_2:24279677-24279696 None:intergenic 50.0%
AAAGGGTGAGATGGTGAAGG+AGG - chr1_2:24279712-24279731 None:intergenic 50.0%
CGATCGAACTTCGCATCAGT+AGG + chr1_2:24280483-24280502 Msa0063670:intron 50.0%
ATATCAGTGCGAAGTCCCGT+TGG - chr1_2:24281362-24281381 None:intergenic 50.0%
!! TCTCCGTCACAAGAAGTGTC+CGG + chr1_2:24282386-24282405 Msa0063670:intron 50.0%
TCTCCGGACACTTCTTGTGA+CGG - chr1_2:24282392-24282411 None:intergenic 50.0%
AGGTGGCAAGTTGTGGGAAA+TGG + chr1_2:24282765-24282784 Msa0063670:intron 50.0%
CCGTTTCCTGTGCCAAAACA+TGG + chr1_2:24282807-24282826 Msa0063670:CDS 50.0%
! CCCATTGGCTGCATTATGCA+TGG + chr1_2:24283006-24283025 Msa0063670:three_prime_UTR 50.0%
GCCATGCATAATGCAGCCAA+TGG - chr1_2:24283010-24283029 None:intergenic 50.0%
!! CAGGTGTGCTAGTGCTGCTT+AGG - chr1_2:24274451-24274470 None:intergenic 55.0%
!! TTAAGGGGTGTCGGTGTGTG+AGG - chr1_2:24274494-24274513 None:intergenic 55.0%
AAGGCCAGCCCATTGAACCA+GGG - chr1_2:24274811-24274830 None:intergenic 55.0%
TAAGGCCAGCCCATTGAACC+AGG - chr1_2:24274812-24274831 None:intergenic 55.0%
!! AACAGTGGCGGATCTCTTGG+TGG + chr1_2:24276738-24276757 Msa0063670:intron 55.0%
TTCGTGGTTGCAGTGGAACG+GGG + chr1_2:24276831-24276850 Msa0063670:intron 55.0%
! GGGGTGCCATAAGTTGCTGA+AGG + chr1_2:24276851-24276870 Msa0063670:intron 55.0%
GCCTGGTGGTATAGATTGCC+TGG - chr1_2:24277213-24277232 None:intergenic 55.0%
GCAGATGCCCTTCACAAGCA+GGG + chr1_2:24277912-24277931 Msa0063670:CDS 55.0%
GCTCACTACCAGGACAAGAG+TGG - chr1_2:24279667-24279686 None:intergenic 55.0%
CCAAGTGACAGATCCCCACT+AGG - chr1_2:24280556-24280575 None:intergenic 55.0%
CCTAGTGGGGATCTGTCACT+TGG + chr1_2:24280553-24280572 Msa0063670:intron 55.0%
GAGAGGGTCCTACTAGTGTG+AGG - chr1_2:24281470-24281489 None:intergenic 55.0%
TACCCCCTGGTTCAATGGGC+TGG + chr1_2:24274804-24274823 Msa0063670:CDS 60.0%
AGGCCAGCCCATTGAACCAG+GGG - chr1_2:24274810-24274829 None:intergenic 60.0%
AGCACTGCTCTAGCTGCCTC+AGG - chr1_2:24275263-24275282 None:intergenic 60.0%
CGAAATACTGGGGGATGCCG+TGG - chr1_2:24276774-24276793 None:intergenic 60.0%
TCGTGGTTGCAGTGGAACGG+GGG + chr1_2:24276832-24276851 Msa0063670:intron 60.0%
!! CTTCCCAGTGGCGGATCTTG+AGG - chr1_2:24277311-24277330 None:intergenic 60.0%
!! GCTTGTGAAGGGCATCTGCC+TGG - chr1_2:24277911-24277930 None:intergenic 60.0%
GGCAGATGCCCTTCACAAGC+AGG + chr1_2:24277911-24277930 Msa0063670:CDS 60.0%
GGCCAGCCCATTGAACCAGG+GGG - chr1_2:24274809-24274828 None:intergenic 65.0%
!! GTGGCGGATCTCTTGGTGGC+CGG + chr1_2:24276742-24276761 Msa0063670:intron 65.0%
! GCGGATCTCTTGGTGGCCGG+CGG + chr1_2:24276745-24276764 Msa0063670:intron 70.0%
! CGGATCTCTTGGTGGCCGGC+GGG + chr1_2:24276746-24276765 Msa0063670:intron 70.0%
! GGATCTCTTGGTGGCCGGCG+GGG + chr1_2:24276747-24276766 Msa0063670:intron 70.0%
! GATCTCTTGGTGGCCGGCGG+GGG + chr1_2:24276748-24276767 Msa0063670:intron 70.0%
!! TTGGTGGCCGGCGGGGGCCA+CGG + chr1_2:24276754-24276773 Msa0063670:intron 80.0%
! GGGGATGCCGTGGCCCCCGC+CGG - chr1_2:24276764-24276783 None:intergenic 85.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 24274394 24283131 24274394 ID=Msa0063670;Name=Msa0063670
chr1_2 mRNA 24274394 24283131 24274394 ID=Msa0063670-mRNA-1;Parent=Msa0063670;Name=Msa0063670-mRNA-1;_AED=0.15;_eAED=0.15;_QI=280|1|1|1|1|1|8|268|478
chr1_2 exon 24274394 24274897 24274394 ID=Msa0063670-mRNA-1:exon:8723;Parent=Msa0063670-mRNA-1
chr1_2 exon 24275202 24275520 24275202 ID=Msa0063670-mRNA-1:exon:8724;Parent=Msa0063670-mRNA-1
chr1_2 exon 24275632 24275781 24275632 ID=Msa0063670-mRNA-1:exon:8725;Parent=Msa0063670-mRNA-1
chr1_2 exon 24276254 24276505 24276254 ID=Msa0063670-mRNA-1:exon:8726;Parent=Msa0063670-mRNA-1
chr1_2 exon 24277844 24277933 24277844 ID=Msa0063670-mRNA-1:exon:8727;Parent=Msa0063670-mRNA-1
chr1_2 exon 24278955 24279140 24278955 ID=Msa0063670-mRNA-1:exon:8728;Parent=Msa0063670-mRNA-1
chr1_2 exon 24279620 24279738 24279620 ID=Msa0063670-mRNA-1:exon:8729;Parent=Msa0063670-mRNA-1
chr1_2 exon 24282767 24283131 24282767 ID=Msa0063670-mRNA-1:exon:8730;Parent=Msa0063670-mRNA-1
chr1_2 five_prime_UTR 24274394 24274673 24274394 ID=Msa0063670-mRNA-1:five_prime_utr;Parent=Msa0063670-mRNA-1
chr1_2 CDS 24274674 24274897 24274674 ID=Msa0063670-mRNA-1:cds;Parent=Msa0063670-mRNA-1
chr1_2 CDS 24275202 24275520 24275202 ID=Msa0063670-mRNA-1:cds;Parent=Msa0063670-mRNA-1
chr1_2 CDS 24275632 24275781 24275632 ID=Msa0063670-mRNA-1:cds;Parent=Msa0063670-mRNA-1
chr1_2 CDS 24276254 24276505 24276254 ID=Msa0063670-mRNA-1:cds;Parent=Msa0063670-mRNA-1
chr1_2 CDS 24277844 24277933 24277844 ID=Msa0063670-mRNA-1:cds;Parent=Msa0063670-mRNA-1
chr1_2 CDS 24278955 24279140 24278955 ID=Msa0063670-mRNA-1:cds;Parent=Msa0063670-mRNA-1
chr1_2 CDS 24279620 24279738 24279620 ID=Msa0063670-mRNA-1:cds;Parent=Msa0063670-mRNA-1
chr1_2 CDS 24282767 24282863 24282767 ID=Msa0063670-mRNA-1:cds;Parent=Msa0063670-mRNA-1
chr1_2 three_prime_UTR 24282864 24283131 24282864 ID=Msa0063670-mRNA-1:three_prime_utr;Parent=Msa0063670-mRNA-1
Gene Sequence

>Msa0063670

ATGCAATTCTTCACATCACTTGCTAATTCTTGTTTAGATTTTTCTCTCCCTTTCATTATATTGCTCCTCTTTTTTACTATCCTTCCTTTCCTTCAATGGTGGAAACACCATAGAGACAAAGACAAATGTTTACCCCCTGGTTCAATGGGCTGGCCTTACTTTGGAGAGACCCTCAAACTCTATACTCAAAACCCAAATTCTTTCTTCTCCACAAGGCAGAAAAGGTATGGAGATATATTCAAGACACACATACTAGGTTGTCCTTGTGTGATGATATCAAGTCCTGAGGCAGCTAGAGCAGTGCTTGTGACTCAAGCACATCTTTTTAAACCAACATACCCTCCAAGCAAAGAGAAGATGATAGGGCCAGAAGCTTTGTTCTTTCAACAAGGTGCATATCACTCCATGCTCAAGAAGCTAGTTCAAGCCTCTTTTTTACCTTCCACACTTAAAAACTCTGTCTCTCATGTGGACCAAATTGTACAAAAATTGGTTCCAACTTGGGCTAATAGAACCATCAACACCTTGCAAGAGATGAAAAAGTATGCTTTTGAAGTGGCTGCAAATTCAGCTTTTGGTGAAATAAAAGAGATGGAAATGGAAGAAATAAGAGAATTGTATCATTGCTTGGAGAAGGGCTACAATTCTTATCCTTTGAAGCTCCATGGAACTTCTTATTGGAAGGCATTGAAGGCAAGGAAGGTTTTGAATGAGAGTATAAGGAGGATAATAGAAAGAAGAAATGAGAGCAGGAATTATGGTGGTGGGTTGTTAGGAATTCTGTTGAGAGGCAAAGGTGATGAGAAGATGTACCAACTAACTGATTCTCAGGTGGCTGATAATATCATTGGTGTCATCTTTGCTGCACATGATACCACAGCTAGTGTTCTAACATGGGTTCTAAAGTACTTGCATGACAATGTCAATCTCTTGGAAACTGTCACAAAAGAACAAGAAGAAATAAGAAGCAAACTTGCTAGGGAATGTCGTGGACTTTCATGGGAGGATACCAGGCAGATGCCCTTCACAAGCAGGGTAATCCAAGAGACATTAAGAAGTGCAAGCATATTATCATTCACATTTAGAGAAGCAGTTAGAGATGTGGAGCTACAAGGTTACTCCATTCCAAAAGGTTGGAAAGTCCTTCCACTCTTTAGAAGTATTCATCATTCACCTCATTTCTTCCCTCAACCACACAAGTTTGACCCTTCAAGATTTGAGAATCCACCTCGACCAAACACATATATGCCATTTGGAAATGGAGTCCACTCTTGTCCTGGTAGTGAGCTTGCTAAGCTTGAGGTTCTTGTCCTCCTTCACCATCTCACCCTTTCATACAGGTGGCAAGTTGTGGGAAATGGAGATGGAATTCAATATGGTCCGTTTCCTGTGCCAAAACATGGATTACCAGTAAAGATAACTCTAAAGAAGAGTTAG
Protein sequence

>Msa0063670

MQFFTSLANSCLDFSLPFIILLLFFTILPFLQWWKHHRDKDKCLPPGSMGWPYFGETLKLYTQNPNSFFSTRQKRYGDIFKTHILGCPCVMISSPEAARAVLVTQAHLFKPTYPPSKEKMIGPEALFFQQGAYHSMLKKLVQASFLPSTLKNSVSHVDQIVQKLVPTWANRTINTLQEMKKYAFEVAANSAFGEIKEMEMEEIRELYHCLEKGYNSYPLKLHGTSYWKALKARKVLNESIRRIIERRNESRNYGGGLLGILLRGKGDEKMYQLTDSQVADNIIGVIFAAHDTTASVLTWVLKYLHDNVNLLETVTKEQEEIRSKLARECRGLSWEDTRQMPFTSRVIQETLRSASILSFTFREAVRDVELQGYSIPKGWKVLPLFRSIHHSPHFFPQPHKFDPSRFENPPRPNTYMPFGNGVHSCPGSELAKLEVLVLLHHLTLSYRWQVVGNGDGIQYGPFPVPKHGLPVKITLKKS*