AlfalfaGEDB | Msa0157870

M. sativa cultivar zhongmu-4 / Msa0157870

KEGG: K20556
GO: GO:0003674 GO:0003824 GO:0004497 GO:0005575 GO:0008150 GO:0008152 GO:0009058 GO:0016020 GO:0016491 GO:0016705 GO:0016709 GO:0019748 GO:0044550 GO:0055114
PFAM: PF00067.25

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0157870	XP_013469342.2	98.131	321	6	0	1	321	1	321	0.0	655

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0157870	sp\|W8JMV1\|CYT24_CATRO	39.506	324	191	2	1	321	3	324	1.42e-76	245

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0157870	A0A396JUW2	98.131	321	6	0	1	321	1	321	0.0	655

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0035650	Msa0157870	0.807948	3.938728e-50	-8.615850e-47
Msa0035660	Msa0157870	0.840313	9.373052e-58	-8.615850e-47
Msa0035690	Msa0157870	0.804281	2.329188e-49	-8.615850e-47
Msa0035710	Msa0157870	0.807421	5.097502e-50	-8.615850e-47
Msa0083730	Msa0157870	0.800961	1.127178e-48	-8.615850e-47
Msa0083800	Msa0157870	0.819517	1.114180e-52	-8.615850e-47
Msa0157870	Msa0176170	0.844478	7.374639e-59	-8.615850e-47
Msa0157870	Msa1173230	0.801145	1.033717e-48	-8.615850e-47
Msa0157870	Msa1173240	0.827844	1.249684e-54	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0157870	MtrunA17_Chr1g0197851	98.131	321	6	0	1	321	1	321	0.0	655
Msa0157870	MtrunA17_Chr1g0197881	97.508	321	7	1	1	321	1	320	0.0	645
Msa0157870	MtrunA17_Chr1g0197891	94.704	321	17	0	1	321	1	321	0.0	635
Msa0157870	MtrunA17_Chr1g0197871	84.735	321	49	0	1	321	1	321	0.0	572
Msa0157870	MtrunA17_Chr2g0314731	54.062	320	145	1	3	320	2	321	1.14e-120	355
Msa0157870	MtrunA17_Chr2g0314721	53.438	320	147	1	3	320	13	332	1.19e-119	353
Msa0157870	MtrunA17_Chr1g0176831	51.562	320	153	1	3	320	32	351	4.62e-114	339
Msa0157870	MtrunA17_Chr1g0205361	46.130	323	171	2	1	321	1	322	2.46e-104	314
Msa0157870	MtrunA17_Chr1g0205371	45.679	324	172	3	1	321	1	323	2.62e-103	311
Msa0157870	MtrunA17_Chr8g0355961	47.432	331	164	3	1	321	1	331	2.35e-101	306
Msa0157870	MtrunA17_Chr1g0160851	45.201	323	174	2	1	321	1	322	8.40e-101	305
Msa0157870	MtrunA17_Chr5g0395321	47.205	322	161	3	1	320	7	321	1.49e-100	305
Msa0157870	MtrunA17_Chr5g0395331	45.141	319	169	2	8	320	10	328	1.26e-98	300
Msa0157870	MtrunA17_Chr8g0356001	47.432	331	164	4	1	321	1	331	1.41e-98	300
Msa0157870	MtrunA17_Chr4g0039901	41.925	322	184	2	1	319	1	322	3.77e-88	273
Msa0157870	MtrunA17_Chr5g0395381	42.857	322	150	4	1	320	7	296	6.69e-85	263
Msa0157870	MtrunA17_Chr1g0164211	44.898	294	159	2	29	320	26	318	3.12e-81	254
Msa0157870	MtrunA17_Chr1g0176851	56.158	203	87	1	120	320	1	203	2.21e-78	239
Msa0157870	MtrunA17_Chr7g0246221	38.245	319	184	4	15	320	9	327	6.37e-72	231
Msa0157870	MtrunA17_Chr7g0246131	37.618	319	189	4	11	321	13	329	1.77e-68	222
Msa0157870	MtrunA17_Chr7g0246181	36.749	283	173	2	45	321	45	327	1.40e-62	206
Msa0157870	MtrunA17_Chr7g0246151	37.324	284	170	4	45	321	45	327	5.27e-60	199
Msa0157870	MtrunA17_Chr1g0200961	34.385	317	193	5	11	320	13	321	4.24e-57	192
Msa0157870	MtrunA17_Chr7g0246121	37.011	281	171	3	45	320	45	324	7.39e-57	191
Msa0157870	MtrunA17_Chr2g0314771	53.750	160	72	1	69	226	1	160	2.03e-52	170
Msa0157870	MtrunA17_Chr4g0057001	28.859	298	204	4	29	320	45	340	5.48e-42	152
Msa0157870	MtrunA17_Chr5g0430101	31.024	332	209	5	1	320	1	324	3.17e-41	150
Msa0157870	MtrunA17_Chr5g0430111	30.844	308	197	4	23	320	26	327	5.77e-40	145
Msa0157870	MtrunA17_Chr8g0390881	29.730	333	213	6	3	320	2	328	2.79e-39	144
Msa0157870	MtrunA17_Chr1g0174481	27.052	329	227	4	1	320	1	325	5.79e-39	144
Msa0157870	MtrunA17_Chr5g0430031	29.091	330	218	5	4	320	1	327	9.78e-39	143
Msa0157870	MtrunA17_Chr5g0430131	30.120	332	214	5	1	320	1	326	7.26e-38	140
Msa0157870	MtrunA17_Chr5g0444971	78.049	82	18	0	80	161	1	82	7.62e-38	129
Msa0157870	MtrunA17_Chr1g0174461	27.928	333	221	6	1	320	4	330	5.25e-37	138
Msa0157870	MtrunA17_Chr4g0056951	28.782	271	184	4	58	321	68	336	1.16e-36	137
Msa0157870	MtrunA17_Chr1g0160861	44.231	156	84	2	168	321	9	163	2.72e-36	133
Msa0157870	MtrunA17_Chr7g0265611	26.045	311	220	4	16	317	28	337	2.91e-36	136
Msa0157870	MtrunA17_Chr5g0430091	29.874	318	213	3	9	319	12	326	4.88e-35	133
Msa0157870	MtrunA17_Chr7g0258221	28.829	333	219	6	1	320	2	329	5.24e-35	133
Msa0157870	MtrunA17_Chr6g0484841	28.479	309	201	5	24	320	27	327	3.97e-34	130
Msa0157870	MtrunA17_Chr8g0344181	26.444	329	226	7	4	321	8	331	7.76e-34	129
Msa0157870	MtrunA17_Chr8g0344151	28.704	324	210	11	12	321	13	329	4.64e-33	127
Msa0157870	MtrunA17_Chr3g0094171	29.492	295	200	5	33	321	39	331	6.83e-33	127
Msa0157870	MtrunA17_Chr5g0403351	27.463	335	214	8	5	320	3	327	7.66e-33	127
Msa0157870	MtrunA17_Chr1g0174471	26.126	333	225	6	2	320	21	346	7.78e-33	127
Msa0157870	MtrunA17_Chr2g0310391	27.103	321	218	9	11	320	2	317	8.29e-33	126
Msa0157870	MtrunA17_Chr3g0086691	29.179	329	216	6	4	319	1	325	4.17e-32	125
Msa0157870	MtrunA17_Chr8g0372251	26.948	308	191	4	35	321	36	330	5.17e-32	124
Msa0157870	MtrunA17_Chr3g0094231	28.620	297	205	4	28	320	30	323	1.15e-31	123
Msa0157870	MtrunA17_Chr3g0101751	28.086	324	201	10	15	320	23	332	1.24e-31	123
Msa0157870	MtrunA17_Chr8g0344191	27.586	319	213	8	14	321	51	362	1.40e-31	124
Msa0157870	MtrunA17_Chr7g0235551	26.140	329	231	6	1	320	2	327	1.64e-31	123
Msa0157870	MtrunA17_Chr1g0213671	29.412	306	198	8	29	320	29	330	2.29e-31	123
Msa0157870	MtrunA17_Chr6g0484811	25.938	320	225	4	8	320	14	328	2.41e-31	122
Msa0157870	MtrunA17_Chr2g0310381	26.791	321	219	9	11	320	2	317	2.54e-31	122
Msa0157870	MtrunA17_Chr7g0254641	25.321	312	220	4	20	320	25	334	4.91e-31	122
Msa0157870	MtrunA17_Chr3g0101581	25.301	332	220	9	4	321	10	327	1.01e-30	121
Msa0157870	MtrunA17_Chr4g0061381	29.181	281	179	6	54	321	51	324	2.61e-30	120
Msa0157870	MtrunA17_Chr3g0086661	29.861	288	190	4	43	320	41	326	2.81e-30	120
Msa0157870	MtrunA17_Chr8g0382901	29.195	298	191	9	33	320	491	778	3.59e-30	120
Msa0157870	MtrunA17_Chr8g0382901	26.733	303	189	9	27	320	21	299	2.14e-22	97.8
Msa0157870	MtrunA17_Chr3g0086651	29.861	288	190	4	43	320	41	326	3.78e-30	119
Msa0157870	MtrunA17_Chr1g0174451	25.740	338	222	10	1	320	5	331	5.12e-30	119
Msa0157870	MtrunA17_Chr3g0101821	27.129	317	213	7	15	320	16	325	5.49e-30	119
Msa0157870	MtrunA17_Chr3g0101801	27.193	342	217	10	1	320	1	332	5.50e-30	119
Msa0157870	MtrunA17_Chr3g0101611	25.890	309	204	7	26	320	30	327	1.19e-29	118
Msa0157870	MtrunA17_Chr3g0101711	26.756	299	200	6	34	320	37	328	1.64e-29	117
Msa0157870	MtrunA17_Chr5g0431641	28.477	302	196	8	30	321	34	325	2.71e-29	117
Msa0157870	MtrunA17_Chr6g0466331	27.052	329	220	8	8	320	1	325	4.84e-29	116
Msa0157870	MtrunA17_Chr3g0101761	26.814	317	214	7	15	320	16	325	6.48e-29	115
Msa0157870	MtrunA17_Chr5g0430081	29.245	318	203	6	17	320	16	325	6.77e-29	115
Msa0157870	MtrunA17_Chr6g0465511	27.052	329	220	8	8	320	1	325	9.24e-29	115
Msa0157870	MtrunA17_Chr8g0361471	26.748	329	221	8	8	320	1	325	1.51e-28	115
Msa0157870	MtrunA17_Chr5g0405001	25.532	329	220	7	7	321	21	338	1.54e-28	115
Msa0157870	MtrunA17_Chr3g0101631	26.299	308	207	8	23	321	25	321	3.25e-28	114
Msa0157870	MtrunA17_Chr1g0174441	26.154	325	226	5	9	320	29	352	3.45e-28	114
Msa0157870	MtrunA17_Chr5g0445461	28.000	325	216	10	6	320	8	324	4.76e-28	113
Msa0157870	MtrunA17_Chr3g0101691	27.586	319	217	8	9	318	14	327	5.79e-28	113
Msa0157870	MtrunA17_Chr5g0445451	26.769	325	222	8	6	321	8	325	5.80e-28	113
Msa0157870	MtrunA17_Chr3g0101721	27.329	322	215	8	10	320	14	327	6.77e-28	113
Msa0157870	MtrunA17_Chr3g0101701	26.791	321	221	8	9	320	14	329	7.46e-28	113
Msa0157870	MtrunA17_Chr5g0403321	26.797	306	202	8	31	320	31	330	1.64e-27	112
Msa0157870	MtrunA17_Chr5g0431671	27.483	302	200	8	30	321	34	326	1.83e-27	112
Msa0157870	MtrunA17_Chr4g0058281	23.292	322	233	5	7	320	22	337	2.05e-27	112
Msa0157870	MtrunA17_Chr3g0101651	27.586	319	217	9	9	318	14	327	5.78e-27	110
Msa0157870	MtrunA17_Chr8g0362701	25.904	332	225	6	2	320	6	329	1.05e-26	109
Msa0157870	MtrunA17_Chr3g0116741	25.237	317	218	9	16	320	30	339	1.19e-26	109
Msa0157870	MtrunA17_Chr4g0035921	25.816	337	220	8	6	321	11	338	1.65e-26	109
Msa0157870	MtrunA17_Chr3g0101671	26.852	324	219	8	9	318	8	327	2.23e-26	108
Msa0157870	MtrunA17_Chr3g0084921	25.223	337	222	10	2	319	6	331	2.34e-26	108
Msa0157870	MtrunA17_Chr3g0101621	26.582	316	212	8	9	320	15	314	2.36e-26	108
Msa0157870	MtrunA17_Chr7g0255531	25.373	335	217	9	4	320	1	320	2.63e-26	108
Msa0157870	MtrunA17_Chr3g0101601	26.959	319	210	9	9	320	18	320	3.28e-26	108
Msa0157870	MtrunA17_Chr3g0101571	26.578	301	202	8	31	321	33	324	3.62e-26	108
Msa0157870	MtrunA17_Chr5g0403331	24.290	317	225	7	15	320	16	328	4.66e-26	107
Msa0157870	MtrunA17_Chr4g0076161	24.922	321	225	7	6	319	11	322	4.67e-26	107
Msa0157870	MtrunA17_Chr8g0357431	26.994	326	215	10	9	320	10	326	5.10e-26	107
Msa0157870	MtrunA17_Chr3g0101831	26.462	325	227	8	3	320	7	326	5.51e-26	107
Msa0157870	MtrunA17_Chr5g0430171	32.569	218	145	1	11	228	14	229	6.02e-26	103
Msa0157870	MtrunA17_Chr1g0162801	28.000	325	214	11	4	318	11	325	7.05e-26	107
Msa0157870	MtrunA17_Chr5g0419451	28.076	317	197	9	19	321	45	344	1.40e-25	106
Msa0157870	MtrunA17_Chr5g0445441	26.300	327	221	8	6	321	49	366	1.43e-25	106
Msa0157870	MtrunA17_Chr4g0030741	24.691	324	223	6	7	320	37	349	1.99e-25	104
Msa0157870	MtrunA17_Chr3g0116681	26.000	300	211	6	27	320	33	327	4.29e-25	105
Msa0157870	MtrunA17_Chr3g0101661	26.364	330	227	7	1	318	1	326	4.70e-25	105
Msa0157870	MtrunA17_Chr8g0357421	26.807	332	207	11	9	320	10	325	6.68e-25	104
Msa0157870	MtrunA17_Chr1g0174421	25.939	293	211	4	9	295	22	314	2.04e-24	101
Msa0157870	MtrunA17_Chr1g0207841	25.357	280	193	5	56	320	60	338	4.75e-24	102
Msa0157870	MtrunA17_Chr4g0011901	23.256	301	218	6	29	320	24	320	5.18e-24	102
Msa0157870	MtrunA17_Chr6g0463791	25.000	328	227	9	4	320	1	320	6.43e-24	101
Msa0157870	MtrunA17_Chr7g0224561	25.503	298	204	5	34	320	31	321	6.43e-24	102
Msa0157870	MtrunA17_Chr7g0224551	25.077	323	220	6	9	320	10	321	7.64e-24	101
Msa0157870	MtrunA17_Chr1g0162811	25.610	328	225	9	3	320	7	325	1.14e-23	100
Msa0157870	MtrunA17_Chr5g0406651	24.510	306	220	7	23	320	19	321	1.47e-23	100
Msa0157870	MtrunA17_Chr4g0030701	25.246	305	214	6	29	320	30	333	2.27e-23	100
Msa0157870	MtrunA17_Chr1g0156101	24.922	321	206	8	26	320	24	335	2.51e-23	100
Msa0157870	MtrunA17_Chr3g0101731	25.610	328	225	9	3	320	7	325	5.29e-23	99.0
Msa0157870	MtrunA17_Chr5g0401691	25.767	326	220	7	3	321	28	338	5.51e-23	99.0
Msa0157870	MtrunA17_Chr1g0156081	24.786	351	218	11	10	320	15	359	5.56e-23	99.4
Msa0157870	MtrunA17_Chr5g0446161	24.768	323	221	7	9	320	14	325	6.45e-23	99.0
Msa0157870	MtrunA17_Chr5g0445531	25.850	294	203	7	34	320	38	323	7.35e-23	98.6
Msa0157870	MtrunA17_Chr1g0167321	26.625	323	216	8	12	318	5	322	8.75e-23	98.6
Msa0157870	MtrunA17_Chr4g0039391	26.449	276	189	6	56	321	57	328	9.18e-23	98.6
Msa0157870	MtrunA17_Chr4g0024771	26.936	297	197	7	35	321	39	325	1.09e-22	98.2
Msa0157870	MtrunA17_Chr4g0020041	26.347	334	216	12	7	320	3	326	2.17e-22	97.4
Msa0157870	MtrunA17_Chr5g0401681	24.923	325	222	6	7	321	11	323	2.64e-22	97.1
Msa0157870	MtrunA17_Chr6g0463801	26.421	299	194	6	34	320	37	321	3.67e-22	96.7
Msa0157870	MtrunA17_Chr1g0198191	22.727	330	231	9	6	321	21	340	4.49e-22	96.7
Msa0157870	MtrunA17_Chr2g0296651	24.847	326	219	7	8	321	12	323	8.45e-22	95.5
Msa0157870	MtrunA17_Chr5g0445381	25.705	319	218	9	10	319	46	354	1.43e-21	95.1
Msa0157870	MtrunA17_Chr4g0011961	24.324	333	222	12	4	320	1	319	2.26e-21	94.4
Msa0157870	MtrunA17_Chr4g0058231	25.460	326	229	6	8	320	1	325	3.34e-21	94.0
Msa0157870	MtrunA17_Chr3g0101811	24.679	312	210	7	30	320	33	340	4.12e-21	93.6
Msa0157870	MtrunA17_Chr8g0362481	25.287	261	185	4	69	320	1	260	5.51e-21	92.8
Msa0157870	MtrunA17_Chr4g0011981	25.168	298	204	8	35	320	30	320	6.30e-21	93.2
Msa0157870	MtrunA17_Chr4g0011921	24.390	328	229	9	4	320	1	320	1.56e-20	92.0
Msa0157870	MtrunA17_Chr4g0030711	23.636	275	195	5	60	320	63	336	2.46e-20	91.3
Msa0157870	MtrunA17_Chr4g0058201	24.399	291	214	3	34	320	28	316	2.61e-20	91.3
Msa0157870	MtrunA17_Chr4g0058191	24.138	319	231	6	8	320	1	314	3.01e-20	90.9
Msa0157870	MtrunA17_Chr4g0058261	22.667	300	223	5	29	320	57	355	3.80e-20	90.9
Msa0157870	MtrunA17_Chr1g0176861	47.191	89	47	0	3	91	6	94	3.97e-20	83.6
Msa0157870	MtrunA17_Chr3g0101741	29.183	257	168	7	69	318	1	250	1.28e-19	89.0
Msa0157870	MtrunA17_Chr4g0052881	26.183	317	218	5	15	321	14	324	1.52e-19	89.0
Msa0157870	MtrunA17_Chr5g0419691	25.081	307	211	8	26	320	21	320	3.98e-19	87.8
Msa0157870	MtrunA17_Chr4g0011871	24.752	303	218	6	26	320	21	321	4.34e-19	87.8
Msa0157870	MtrunA17_Chr4g0052861	23.333	330	234	6	1	321	4	323	5.80e-19	87.4
Msa0157870	MtrunA17_Chr6g0472311	23.631	347	218	10	7	321	10	341	6.31e-19	87.4
Msa0157870	MtrunA17_Chr4g0011881	22.917	336	187	9	23	320	19	320	7.38e-19	87.0
Msa0157870	MtrunA17_Chr4g0046351	25.166	302	198	9	35	320	35	324	1.41e-18	86.3
Msa0157870	MtrunA17_Chr4g0046331	24.834	302	199	9	35	320	35	324	1.80e-18	85.9
Msa0157870	MtrunA17_Chr4g0011861	32.117	137	92	1	26	161	21	157	1.81e-18	84.3
Msa0157870	MtrunA17_Chr4g0047641	24.308	325	222	9	9	319	25	339	1.84e-18	85.9
Msa0157870	MtrunA17_Chr2g0280261	24.752	303	210	5	26	320	26	318	3.82e-18	84.7
Msa0157870	MtrunA17_Chr5g0446151	22.333	300	206	7	34	320	41	326	4.22e-18	84.7
Msa0157870	MtrunA17_Chr4g0046321	24.549	277	185	6	57	320	59	324	5.90e-18	84.3
Msa0157870	MtrunA17_Chr8g0370641	21.829	339	245	9	1	321	7	343	7.95e-18	84.0
Msa0157870	MtrunA17_Chr5g0445751	31.013	158	107	2	3	159	14	170	9.27e-18	82.4
Msa0157870	MtrunA17_Chr4g0011931	27.848	158	109	3	4	159	1	155	1.67e-17	81.3
Msa0157870	MtrunA17_Chr5g0445421	24.615	325	208	8	6	321	82	378	2.26e-17	82.8
Msa0157870	MtrunA17_Chr4g0053621	23.102	303	212	7	34	321	31	327	2.60e-17	82.4
Msa0157870	MtrunA17_Chr1g0156061	24.221	289	163	8	35	320	56	291	2.61e-17	82.4
Msa0157870	MtrunA17_Chr4g0047631	20.988	324	213	8	18	319	33	335	2.78e-17	82.4
Msa0157870	MtrunA17_Chr8g0339311	23.392	342	227	10	11	321	9	346	8.67e-17	80.9
Msa0157870	MtrunA17_Chr8g0370651	21.637	342	244	10	2	321	8	347	1.26e-16	80.5
Msa0157870	MtrunA17_Chr6g0451741	23.460	341	225	11	8	320	37	369	1.47e-16	80.1
Msa0157870	MtrunA17_Chr5g0431501	23.607	305	204	9	34	320	33	326	1.70e-16	80.1
Msa0157870	MtrunA17_Chr5g0431461	23.607	305	204	9	34	320	33	326	1.70e-16	80.1
Msa0157870	MtrunA17_Chr1g0207851	25.101	247	166	7	65	295	69	312	1.88e-16	79.0
Msa0157870	MtrunA17_Chr4g0017411	23.779	307	221	5	19	321	14	311	2.39e-16	79.3
Msa0157870	MtrunA17_Chr2g0296661	23.656	279	198	4	55	321	53	328	2.73e-16	79.3
Msa0157870	MtrunA17_Chr7g0258211	23.220	323	229	8	10	321	15	329	2.86e-16	79.3
Msa0157870	MtrunA17_Chr4g0047661	21.118	322	244	5	8	319	19	340	3.06e-16	79.3
Msa0157870	MtrunA17_Chr5g0423601	39.024	82	50	0	117	198	1	82	3.87e-16	72.8
Msa0157870	MtrunA17_Chr6g0463611	22.727	286	202	9	3	282	22	294	4.02e-16	77.8
Msa0157870	MtrunA17_Chr7g0218601	20.530	302	224	6	30	320	30	326	7.18e-16	78.2
Msa0157870	MtrunA17_Chr4g0052851	22.222	306	225	6	19	320	17	313	1.84e-15	77.0
Msa0157870	MtrunA17_Chr6g0451781	24.013	304	203	9	41	320	81	380	4.78e-15	75.9
Msa0157870	MtrunA17_Chr5g0431511	22.772	303	209	9	34	320	33	326	7.83e-15	75.1
Msa0157870	MtrunA17_Chr4g0008101	21.471	340	231	9	8	320	17	347	9.25e-15	74.7
Msa0157870	MtrunA17_Chr8g0346261	26.255	259	175	8	68	321	121	368	1.65e-14	73.9
Msa0157870	MtrunA17_Chr3g0107611	23.779	307	216	7	33	321	49	355	2.38e-14	73.6
Msa0157870	MtrunA17_Chr8g0351801	23.616	271	192	5	65	321	65	334	3.59e-14	73.2
Msa0157870	MtrunA17_Chr5g0431631	32.394	142	89	2	2	141	23	159	3.64e-14	69.3
Msa0157870	MtrunA17_Chr4g0046691	23.881	268	192	6	26	288	30	290	6.00e-14	71.2
Msa0157870	MtrunA17_Chr2g0280071	23.009	339	211	12	7	321	45	357	6.30e-14	72.4
Msa0157870	MtrunA17_Chr2g0304871	27.429	175	115	5	7	173	10	180	9.94e-14	71.6
Msa0157870	MtrunA17_Chr7g0218611	21.382	304	223	7	28	320	27	325	1.24e-13	71.2
Msa0157870	MtrunA17_Chr5g0445411	28.571	154	107	2	10	161	22	174	1.62e-13	67.8
Msa0157870	MtrunA17_Chr5g0430071	34.375	128	70	3	203	320	57	180	2.58e-13	70.1
Msa0157870	MtrunA17_Chr6g0451691	21.676	346	230	11	7	320	15	351	2.61e-13	70.5
Msa0157870	MtrunA17_Chr6g0451681	27.528	178	119	5	1	170	29	204	2.89e-13	70.1
Msa0157870	MtrunA17_Chr8g0339331	23.051	295	195	11	35	306	39	324	3.08e-13	70.1
Msa0157870	MtrunA17_Chr2g0310371	26.389	144	103	1	11	151	2	145	3.22e-13	66.2
Msa0157870	MtrunA17_Chr3g0082701	22.414	348	236	8	2	320	6	348	4.75e-13	69.7
Msa0157870	MtrunA17_Chr3g0107561	24.739	287	202	5	5	277	14	300	5.53e-13	68.6
Msa0157870	MtrunA17_Chr7g0246141	34.545	110	66	2	201	307	5	111	5.71e-13	64.7
Msa0157870	MtrunA17_Chr6g0451641	23.494	332	214	13	18	320	20	340	5.91e-13	69.3
Msa0157870	MtrunA17_Chr4g0046631	22.635	296	209	8	26	306	38	328	9.36e-13	68.6
Msa0157870	MtrunA17_Chr5g0430051	40.426	94	54	1	8	101	14	105	9.43e-13	63.9
Msa0157870	MtrunA17_Chr6g0466941	25.138	362	219	15	1	319	1	353	1.36e-12	68.2
Msa0157870	MtrunA17_Chr5g0423611	35.526	76	49	0	210	285	1	76	1.71e-12	62.4
Msa0157870	MtrunA17_Chr5g0432751	20.195	307	229	6	25	319	24	326	2.13e-12	67.8
Msa0157870	MtrunA17_Chr3g0107541	20.070	284	215	4	50	321	67	350	3.29e-12	67.0
Msa0157870	MtrunA17_Chr6g0477081	27.215	158	99	4	167	320	9	154	4.31e-11	62.0
Msa0157870	MtrunA17_Chr2g0280041	23.653	334	229	11	4	321	33	356	4.56e-11	63.5
Msa0157870	MtrunA17_Chr6g0458561	22.154	325	229	9	1	306	18	337	5.25e-11	63.5
Msa0157870	MtrunA17_Chr5g0402971	21.923	260	181	8	35	277	41	295	7.89e-11	62.0
Msa0157870	MtrunA17_Chr6g0466901	25.071	351	220	14	1	320	1	339	8.37e-11	62.8

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0157870	AT3G61040.2	36.093	302	183	3	25	321	24	320	1.33e-63	206
Msa0157870	AT3G61040.1	36.093	302	183	3	25	321	24	320	1.64e-62	206
Msa0157870	AT2G45550.1	32.530	332	213	5	1	321	1	332	4.93e-58	195
Msa0157870	AT2G45560.1	31.532	333	215	5	1	321	1	332	1.11e-51	178
Msa0157870	AT2G45580.3	34.495	287	179	2	44	321	48	334	2.12e-51	175
Msa0157870	AT2G45580.1	34.495	287	179	2	44	321	48	334	1.55e-50	175
Msa0157870	AT2G45570.1	32.733	333	212	5	1	321	1	333	2.19e-48	169
Msa0157870	AT1G33720.1	28.916	332	225	5	1	321	1	332	3.29e-47	166
Msa0157870	AT2G45560.2	29.605	304	201	5	1	292	1	303	1.21e-41	147
Msa0157870	AT5G44620.1	29.963	267	181	2	61	321	73	339	2.01e-39	145
Msa0157870	AT4G12330.1	30.597	268	177	4	61	321	73	338	1.36e-38	143
Msa0157870	AT4G12300.1	28.213	319	221	3	10	321	18	335	4.33e-38	142
Msa0157870	AT4G12320.1	26.875	320	226	3	10	321	18	337	8.31e-38	141
Msa0157870	AT5G07990.1	29.179	329	216	9	4	321	1	323	6.30e-37	138
Msa0157870	AT4G12310.1	29.259	270	183	3	60	321	70	339	1.28e-36	138
Msa0157870	AT2G45560.3	30.833	240	157	3	1	231	1	240	2.59e-36	131
Msa0157870	AT3G52970.1	27.052	329	220	7	3	320	14	333	2.73e-36	137
Msa0157870	AT3G52970.2	25.948	343	220	7	3	320	14	347	2.40e-34	132
Msa0157870	AT4G22710.1	28.788	264	178	4	65	321	85	345	6.16e-34	130
Msa0157870	AT4G22690.1	28.788	264	178	4	65	321	116	376	1.49e-33	130
Msa0157870	AT3G26300.1	26.220	328	224	6	4	320	1	321	1.50e-31	123
Msa0157870	AT5G06900.1	27.879	330	223	6	1	321	2	325	1.58e-31	123
Msa0157870	AT5G57260.1	25.658	304	211	5	27	320	23	321	5.45e-31	122
Msa0157870	AT3G26310.1	26.235	324	216	7	8	320	9	320	1.09e-30	121
Msa0157870	AT4G37310.1	26.994	326	225	5	7	321	3	326	1.96e-28	115
Msa0157870	AT3G26330.1	25.743	303	207	5	29	320	26	321	9.31e-28	113
Msa0157870	AT4G13770.1	25.155	322	218	9	12	321	11	321	1.28e-27	112
Msa0157870	AT3G26320.1	25.460	326	206	7	14	320	14	321	3.29e-27	111
Msa0157870	AT2G02580.1	25.312	320	224	6	9	320	9	321	4.90e-27	110
Msa0157870	AT3G26290.1	25.163	306	211	5	26	320	23	321	8.72e-27	110
Msa0157870	AT1G33730.1	30.366	191	127	2	137	321	6	196	9.13e-27	108
Msa0157870	AT1G33730.2	30.366	191	127	2	137	321	6	196	9.13e-27	108
Msa0157870	AT3G26290.2	25.163	306	211	5	26	320	36	334	1.16e-26	110
Msa0157870	AT5G25120.1	23.313	326	229	7	3	320	5	317	2.63e-26	108
Msa0157870	AT4G31500.1	26.994	326	208	11	11	321	10	320	4.99e-26	108
Msa0157870	AT5G25140.1	23.750	320	231	6	9	320	3	317	1.73e-25	106
Msa0157870	AT3G48280.1	24.684	316	229	3	8	321	4	312	1.99e-25	106
Msa0157870	AT5G06905.1	25.150	334	225	8	1	321	1	322	2.31e-25	106
Msa0157870	AT4G36220.1	23.841	302	201	5	41	321	47	340	6.81e-25	105
Msa0157870	AT2G45580.2	33.146	178	110	2	153	321	3	180	8.42e-25	103
Msa0157870	AT5G67310.1	24.528	318	232	6	9	321	18	332	2.53e-24	103
Msa0157870	AT5G25180.1	24.281	313	220	8	18	320	12	317	6.52e-24	102
Msa0157870	AT5G04330.1	25.000	304	203	7	35	321	33	328	1.24e-23	101
Msa0157870	AT1G13080.1	25.153	326	233	5	4	320	1	324	1.39e-23	101
Msa0157870	AT1G13110.1	24.850	334	222	7	7	320	2	326	1.67e-23	100
Msa0157870	AT3G26180.1	25.758	330	224	7	7	321	2	325	2.27e-23	100
Msa0157870	AT1G01280.1	23.711	291	213	3	39	320	37	327	2.74e-23	100
Msa0157870	AT4G13310.2	21.967	305	230	4	22	321	20	321	3.55e-23	99.0
Msa0157870	AT3G26170.1	24.324	333	225	8	7	321	2	325	5.63e-23	99.4
Msa0157870	AT4G13310.1	21.967	305	230	4	22	321	20	321	6.18e-23	99.4
Msa0157870	AT2G40890.1	25.826	333	214	7	6	320	2	319	6.47e-23	99.4
Msa0157870	AT1G33720.4	29.703	202	130	4	129	321	2	200	6.51e-23	98.2
Msa0157870	AT1G33720.3	29.703	202	130	4	129	321	2	200	6.51e-23	98.2
Msa0157870	AT1G33720.5	29.703	202	130	4	129	321	2	200	6.51e-23	98.2
Msa0157870	AT1G11610.1	24.150	294	210	6	34	321	33	319	1.56e-22	98.2
Msa0157870	AT1G11610.2	24.150	294	210	6	34	321	33	319	1.82e-22	97.8
Msa0157870	AT3G48320.1	24.074	324	232	7	1	321	1	313	2.74e-22	97.4
Msa0157870	AT3G26280.1	25.641	312	221	5	18	320	16	325	3.82e-22	97.1
Msa0157870	AT2G30770.1	23.891	293	212	7	34	321	33	319	3.98e-22	97.1
Msa0157870	AT3G26280.2	25.641	312	221	5	18	320	33	342	4.54e-22	97.1
Msa0157870	AT4G13290.1	24.756	307	211	5	22	321	21	314	4.58e-22	96.7
Msa0157870	AT5G42590.1	22.561	328	229	7	8	321	4	320	8.04e-22	95.9
Msa0157870	AT4G37430.1	23.263	331	227	9	8	321	1	321	8.13e-22	95.9
Msa0157870	AT2G24180.1	25.497	302	210	6	29	320	31	327	1.37e-21	95.5
Msa0157870	AT1G74540.1	22.424	330	221	8	8	320	1	312	3.19e-21	94.4
Msa0157870	AT4G37410.1	23.684	304	215	8	27	321	23	318	3.45e-21	94.4
Msa0157870	AT5G25130.1	24.159	327	225	7	3	320	5	317	3.46e-21	94.4
Msa0157870	AT2G23220.1	24.756	307	208	6	28	321	40	336	4.24e-21	94.0
Msa0157870	AT3G44250.1	26.403	303	205	7	30	320	24	320	4.39e-21	94.0
Msa0157870	AT3G53280.1	25.084	299	213	5	30	320	24	319	7.57e-21	93.2
Msa0157870	AT2G23190.1	25.602	332	226	8	2	321	43	365	1.07e-20	92.8
Msa0157870	AT5G10600.1	24.924	329	217	11	8	321	23	336	2.46e-20	91.7
Msa0157870	AT5G24960.2	22.924	301	222	6	26	321	25	320	2.55e-20	90.9
Msa0157870	AT2G46660.1	26.623	308	211	9	18	321	55	351	3.04e-20	91.7
Msa0157870	AT3G10560.1	22.985	335	236	10	1	321	11	337	3.87e-20	91.3
Msa0157870	AT5G24960.1	22.667	300	224	4	26	321	25	320	4.29e-20	90.9
Msa0157870	AT1G74550.1	22.118	321	227	8	8	320	1	306	4.52e-20	90.9
Msa0157870	AT5G24950.1	23.024	291	218	3	34	321	32	319	6.42e-20	90.5
Msa0157870	AT1G01190.1	28.852	305	181	12	32	321	70	353	6.88e-20	90.5
Msa0157870	AT1G01190.2	28.852	305	181	12	32	321	75	358	7.29e-20	90.5
Msa0157870	AT1G74110.1	26.115	314	212	9	23	321	52	360	7.66e-20	90.5
Msa0157870	AT1G13710.1	27.576	330	216	12	3	319	18	337	1.64e-19	89.4
Msa0157870	AT3G26190.1	25.080	311	212	6	24	320	18	321	1.72e-19	89.4
Msa0157870	AT4G37360.1	24.024	333	226	9	4	321	1	321	1.72e-19	89.4
Msa0157870	AT3G26270.1	25.733	307	211	6	26	320	24	325	2.30e-19	89.0
Msa0157870	AT5G57220.1	25.076	331	223	10	1	321	1	316	2.80e-19	88.6
Msa0157870	AT3G26160.1	23.457	324	231	5	9	321	8	325	3.38e-19	88.6
Msa0157870	AT3G26200.1	26.230	305	204	7	30	320	24	321	3.73e-19	88.2
Msa0157870	AT1G50520.1	26.460	291	195	9	43	321	52	335	3.91e-19	88.2
Msa0157870	AT3G26150.1	21.807	321	240	4	9	321	8	325	5.35e-19	87.8
Msa0157870	AT1G13090.2	26.959	319	187	10	28	320	22	320	5.38e-19	87.8
Msa0157870	AT4G37340.1	24.540	326	217	11	10	321	11	321	5.43e-19	87.8
Msa0157870	AT5G36220.1	24.085	328	226	9	8	321	9	327	1.24e-18	86.7
Msa0157870	AT2G30750.1	24.915	293	207	6	34	320	33	318	1.39e-18	86.7
Msa0157870	AT4G37320.1	24.675	308	207	11	29	321	24	321	1.53e-18	86.3
Msa0157870	AT2G42250.1	23.385	325	229	6	7	321	17	331	1.77e-18	86.3
Msa0157870	AT3G48290.1	23.000	300	219	6	24	321	25	314	1.86e-18	86.3
Msa0157870	AT3G48310.1	22.408	299	218	7	26	321	26	313	2.22e-18	85.9
Msa0157870	AT3G48270.1	20.807	322	235	7	8	321	3	312	2.41e-18	85.9
Msa0157870	AT5G04660.1	24.286	280	197	7	52	321	61	335	5.11e-18	85.1
Msa0157870	AT4G31940.1	24.566	346	229	9	4	321	1	342	6.73e-18	84.7
Msa0157870	AT3G61035.1	25.188	266	176	7	43	299	51	302	1.79e-17	82.0
Msa0157870	AT4G37330.1	24.768	323	222	9	10	321	6	318	2.93e-17	82.8
Msa0157870	AT3G48300.1	21.160	293	209	5	36	320	31	309	4.12e-17	82.0
Msa0157870	AT3G48300.2	21.160	293	209	5	36	320	33	311	4.14e-17	82.0
Msa0157870	AT5G04630.1	23.692	325	224	12	11	321	18	332	4.24e-17	82.0
Msa0157870	AT5G42580.1	23.704	270	190	6	54	320	60	316	7.19e-17	81.6
Msa0157870	AT3G61880.1	27.063	303	201	10	28	321	60	351	1.00e-16	81.3
Msa0157870	AT3G20140.1	22.295	305	216	9	29	321	37	332	1.27e-16	80.9
Msa0157870	AT3G61880.2	28.846	260	168	8	68	321	103	351	1.31e-16	80.9
Msa0157870	AT3G26210.1	25.080	311	207	6	26	320	23	323	3.37e-16	79.3
Msa0157870	AT4G37400.1	23.221	267	191	6	61	321	58	316	5.92e-16	78.6
Msa0157870	AT3G20950.1	22.054	331	236	9	6	320	11	335	6.52e-16	78.6
Msa0157870	AT3G26220.1	23.026	304	221	5	28	320	23	324	7.96e-16	78.2
Msa0157870	AT4G37370.1	24.848	330	215	13	7	321	9	320	7.97e-16	78.2
Msa0157870	AT1G33720.2	24.670	227	134	5	129	321	2	225	2.21e-15	76.6
Msa0157870	AT4G20240.2	22.184	293	220	4	33	321	32	320	2.43e-15	76.6
Msa0157870	AT2G27000.1	21.479	284	208	7	44	319	52	328	2.63e-15	77.0
Msa0157870	AT4G20240.1	22.184	293	220	4	33	321	32	320	2.78e-15	76.6
Msa0157870	AT5G10610.1	23.030	330	223	12	3	321	11	320	3.89e-15	76.3
Msa0157870	AT3G20110.1	22.571	319	231	8	10	317	12	325	4.25e-15	76.3
Msa0157870	AT3G28740.1	26.367	311	200	10	26	321	33	329	4.83e-15	75.9
Msa0157870	AT3G32047.1	21.978	273	202	5	54	320	63	330	5.59e-15	75.9
Msa0157870	AT2G14100.1	22.256	328	223	9	9	320	21	332	5.68e-15	75.9
Msa0157870	AT3G26230.1	23.438	320	230	5	15	320	3	321	5.97e-15	75.9
Msa0157870	AT3G20940.1	22.571	319	226	9	14	321	25	333	6.75e-15	75.5
Msa0157870	AT3G10570.1	23.881	268	190	7	63	321	75	337	1.13e-14	75.1
Msa0157870	AT3G48290.2	21.166	326	219	7	24	321	25	340	9.47e-14	72.0
Msa0157870	AT1G50560.1	22.383	277	198	6	56	321	66	336	9.71e-14	72.0
Msa0157870	AT3G53300.1	23.026	304	209	8	33	320	27	321	1.53e-13	71.6
Msa0157870	AT1G13090.1	25.714	280	167	9	28	286	22	281	2.63e-13	69.7
Msa0157870	AT3G20090.2	21.071	280	194	6	56	320	66	333	2.78e-13	70.9
Msa0157870	AT4G15350.1	21.678	286	207	7	46	321	48	326	6.14e-13	69.7
Msa0157870	AT4G15330.1	23.171	328	225	12	10	321	12	328	9.57e-13	68.9
Msa0157870	AT1G66540.1	28.241	216	136	7	117	321	1	208	1.64e-12	68.2
Msa0157870	AT3G20130.1	21.245	273	195	6	56	317	65	328	2.01e-12	68.2
Msa0157870	AT1G79370.1	22.778	360	237	11	1	321	1	358	3.64e-12	67.4
Msa0157870	AT2G22330.1	23.824	340	232	11	3	321	26	359	4.55e-12	67.0
Msa0157870	AT2G22330.2	23.824	340	232	11	3	321	49	382	5.10e-12	67.0
Msa0157870	AT5G05260.2	21.865	311	221	7	31	320	37	346	7.52e-12	66.2
Msa0157870	AT4G39950.1	22.619	336	240	8	3	321	25	357	1.23e-11	65.9
Msa0157870	AT4G39950.2	22.619	336	240	8	3	321	65	397	1.51e-11	65.5
Msa0157870	AT3G20100.1	20.229	262	200	4	65	320	73	331	2.14e-11	65.1
Msa0157870	AT5G35917.1	21.767	317	224	7	27	320	35	350	2.67e-11	64.7
Msa0157870	AT3G26830.1	22.754	334	227	9	4	320	1	320	4.41e-11	63.9
Msa0157870	AT3G20080.2	22.517	302	212	7	32	320	40	332	4.64e-11	63.9
Msa0157870	AT3G20080.1	22.517	302	212	7	32	320	40	332	4.64e-11	63.9
Msa0157870	AT4G15380.1	21.154	260	195	5	65	320	74	327	4.73e-11	63.9

Find 42 sgRNAs with CRISPR-Local

Find 104 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
CATCTTCTGACTATCTTCTT+TGG	0.207659	1_4:+26130412	None:intergenic
CACCTCTTTGGCAACATCTT+AGG	0.253021	1_4:-26130877	Msa0157870:CDS
GCAGAATTTGCTAAGTTATA+TGG	0.274876	1_4:-26131070	Msa0157870:CDS
GATTACAGATATGGATTATA+TGG	0.280919	1_4:-26131254	None:intergenic
TTCTCTACCAAGACTCTTGA+TGG	0.280959	1_4:-26130833	Msa0157870:CDS
GGGAAATGATCAGCAATATT+TGG	0.290025	1_4:+26130599	None:intergenic
TTCAAAAGTGTTCTATGCTT+TGG	0.301447	1_4:-26130522	Msa0157870:CDS
TGTTGCCAAAGAGGTGAAAA+TGG	0.310336	1_4:+26130884	None:intergenic
TGCATTGTCACCTTCTTCAT+TGG	0.349001	1_4:-26131205	Msa0157870:CDS
CATAACTTAATACGCATAAT+AGG	0.354037	1_4:+26131046	None:intergenic
ATGTGACATGATGGTGAAAA+AGG	0.355163	1_4:+26131129	None:intergenic
TGTGTCTTCTAATGCCTTGT+GGG	0.382258	1_4:+26130558	None:intergenic
TTGTGAGTTGTAGTGTTATC+AGG	0.397170	1_4:+26130935	None:intergenic
TGTTGGAAGAGCTGCTTTCA+AGG	0.399048	1_4:-26130729	Msa0157870:CDS
ATGCATAAAAGTAGCTTAAC+CGG	0.406557	1_4:-26130764	Msa0157870:CDS
TGACATGCTAGACGCCTTGT+TGG	0.434717	1_4:-26130441	Msa0157870:CDS
ATGTGACGATGAGATGATTA+TGG	0.453468	1_4:+26131012	None:intergenic
AATCATCTCATCGTCACATA+TGG	0.463752	1_4:-26131008	Msa0157870:CDS
CAAAGAAGATAGTCAGAAGA+TGG	0.475051	1_4:-26130411	Msa0157870:CDS
TTCCTAAGATGTTGCCAAAG+AGG	0.478700	1_4:+26130875	None:intergenic
TCCAACATCAACAGCTTCAC+CGG	0.481843	1_4:+26130745	None:intergenic
GGAACGGAAACATCGGCATA+TGG	0.488588	1_4:-26130170	Msa0157870:CDS
TAATAGGATTTGCTTGTGGC+GGG	0.497881	1_4:-26130191	Msa0157870:intron
TTGACTTCCATCAAGAGTCT+TGG	0.512046	1_4:+26130826	None:intergenic
GGATTTGCTTGTGGCGGGAA+CGG	0.513991	1_4:-26130186	Msa0157870:CDS
GTGTGTCTTCTAATGCCTTG+TGG	0.521014	1_4:+26130557	None:intergenic
CATCGGCATATGGATTAGAA+AGG	0.524755	1_4:-26130160	Msa0157870:CDS
TCTACTCTATTAAGTGCTGT+TGG	0.530508	1_4:-26130626	Msa0157870:CDS
ATCGGCATATGGATTAGAAA+GGG	0.547367	1_4:-26130159	Msa0157870:CDS
GTTGCCAAAGAGGTGAAAAT+GGG	0.550649	1_4:+26130885	None:intergenic
ACCGGTGAAGCTGTTGATGT+TGG	0.556936	1_4:-26130746	Msa0157870:CDS
GGGCAATGAGTGAAGTAGTA+CGG	0.573843	1_4:-26130139	Msa0157870:CDS
TTCAACAACATGTGACATGA+TGG	0.588619	1_4:+26131120	None:intergenic
AGTTGTAGTGTTATCAGGAA+CGG	0.594813	1_4:+26130940	None:intergenic
TTAATAGGATTTGCTTGTGG+CGG	0.598258	1_4:-26130192	Msa0157870:intron
TGTGGCGGGAACGGAAACAT+CGG	0.614267	1_4:-26130177	Msa0157870:CDS
ATGCAATGAACCAATGAAGA+AGG	0.631099	1_4:+26131195	None:intergenic
TTCTTTGGAAATGTCCAACA+AGG	0.632996	1_4:+26130427	None:intergenic
GCCAAAGAGGTGAAAATGGG+AGG	0.644896	1_4:+26130888	None:intergenic
TCAAACTACAAACTTCCACC+AGG	0.675501	1_4:-26131157	Msa0157870:CDS
AATTCTGCAAGTGTTTGTTG+TGG	0.681899	1_4:+26131085	None:intergenic
TGAAGTAGTACGGCATCCAG+AGG	0.681999	1_4:-26130129	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!	ATTTGTAAAAAGAATCTCTT+TGG	+	chr1_4:26130392-26130411	None:intergenic	20.0%
!!!	GTGACTTTTGTAATTTTAAT+AGG	-	chr1_4:26131167-26131186	Msa0157870:CDS	20.0%
!!	ATTTGTAAAAAGAATCTCTT+TGG	+	chr1_4:26130392-26130411	None:intergenic	20.0%
!!!	GTGACTTTTGTAATTTTAAT+AGG	-	chr1_4:26131167-26131186	Msa0157870:CDS	20.0%
!	CATAACTTAATACGCATAAT+AGG	+	chr1_4:26130331-26130350	None:intergenic	25.0%
!	GTTAATTAAAAGAGAGAGAT+AGG	+	chr1_4:26131029-26131048	None:intergenic	25.0%
!!!	ATTTTAATAGGATTTGCTTG+TGG	-	chr1_4:26131179-26131198	Msa0157870:CDS	25.0%
!	CATAACTTAATACGCATAAT+AGG	+	chr1_4:26130331-26130350	None:intergenic	25.0%
!	GTTAATTAAAAGAGAGAGAT+AGG	+	chr1_4:26131029-26131048	None:intergenic	25.0%
!!!	ATTTTAATAGGATTTGCTTG+TGG	-	chr1_4:26131179-26131198	Msa0157870:CDS	25.0%
!!	GCAGAATTTGCTAAGTTATA+TGG	-	chr1_4:26130304-26130323	Msa0157870:intron	30.0%
	ATGCATAAAAGTAGCTTAAC+CGG	-	chr1_4:26130610-26130629	Msa0157870:CDS	30.0%
!!	TTCAAAAGTGTTCTATGCTT+TGG	-	chr1_4:26130852-26130871	Msa0157870:CDS	30.0%
!!	GCAGAATTTGCTAAGTTATA+TGG	-	chr1_4:26130304-26130323	Msa0157870:intron	30.0%
	ATGCATAAAAGTAGCTTAAC+CGG	-	chr1_4:26130610-26130629	Msa0157870:CDS	30.0%
!!	TTCAAAAGTGTTCTATGCTT+TGG	-	chr1_4:26130852-26130871	Msa0157870:CDS	30.0%
	ATGCAATGAACCAATGAAGA+AGG	+	chr1_4:26130182-26130201	None:intergenic	35.0%
!	ATGTGACATGATGGTGAAAA+AGG	+	chr1_4:26130248-26130267	None:intergenic	35.0%
	TTCAACAACATGTGACATGA+TGG	+	chr1_4:26130257-26130276	None:intergenic	35.0%
!	AATTCTGCAAGTGTTTGTTG+TGG	+	chr1_4:26130292-26130311	None:intergenic	35.0%
	ATGTGACGATGAGATGATTA+TGG	+	chr1_4:26130365-26130384	None:intergenic	35.0%
	AATCATCTCATCGTCACATA+TGG	-	chr1_4:26130366-26130385	Msa0157870:intron	35.0%
	AGTTGTAGTGTTATCAGGAA+CGG	+	chr1_4:26130437-26130456	None:intergenic	35.0%
	TTGTGAGTTGTAGTGTTATC+AGG	+	chr1_4:26130442-26130461	None:intergenic	35.0%
!	TCTACTCTATTAAGTGCTGT+TGG	-	chr1_4:26130748-26130767	Msa0157870:CDS	35.0%
	GGGAAATGATCAGCAATATT+TGG	+	chr1_4:26130778-26130797	None:intergenic	35.0%
	GGTCAAAAATCTTCAACACT+GGG	+	chr1_4:26130798-26130817	None:intergenic	35.0%
!	TTGAAGATTTTTGACCCACA+AGG	-	chr1_4:26130802-26130821	Msa0157870:CDS	35.0%
!	TTCTTTGGAAATGTCCAACA+AGG	+	chr1_4:26130950-26130969	None:intergenic	35.0%
	CATCTTCTGACTATCTTCTT+TGG	+	chr1_4:26130965-26130984	None:intergenic	35.0%
	CAAAGAAGATAGTCAGAAGA+TGG	-	chr1_4:26130963-26130982	Msa0157870:CDS	35.0%
!	TTAATAGGATTTGCTTGTGG+CGG	-	chr1_4:26131182-26131201	Msa0157870:CDS	35.0%
!!	ATCGGCATATGGATTAGAAA+GGG	-	chr1_4:26131215-26131234	Msa0157870:CDS	35.0%
	ATGCAATGAACCAATGAAGA+AGG	+	chr1_4:26130182-26130201	None:intergenic	35.0%
!	ATGTGACATGATGGTGAAAA+AGG	+	chr1_4:26130248-26130267	None:intergenic	35.0%
	TTCAACAACATGTGACATGA+TGG	+	chr1_4:26130257-26130276	None:intergenic	35.0%
!	AATTCTGCAAGTGTTTGTTG+TGG	+	chr1_4:26130292-26130311	None:intergenic	35.0%
	ATGTGACGATGAGATGATTA+TGG	+	chr1_4:26130365-26130384	None:intergenic	35.0%
	AATCATCTCATCGTCACATA+TGG	-	chr1_4:26130366-26130385	Msa0157870:intron	35.0%
	AGTTGTAGTGTTATCAGGAA+CGG	+	chr1_4:26130437-26130456	None:intergenic	35.0%
	TTGTGAGTTGTAGTGTTATC+AGG	+	chr1_4:26130442-26130461	None:intergenic	35.0%
!	TCTACTCTATTAAGTGCTGT+TGG	-	chr1_4:26130748-26130767	Msa0157870:CDS	35.0%
	GGGAAATGATCAGCAATATT+TGG	+	chr1_4:26130778-26130797	None:intergenic	35.0%
	GGTCAAAAATCTTCAACACT+GGG	+	chr1_4:26130798-26130817	None:intergenic	35.0%
!	TTGAAGATTTTTGACCCACA+AGG	-	chr1_4:26130802-26130821	Msa0157870:CDS	35.0%
!	TTCTTTGGAAATGTCCAACA+AGG	+	chr1_4:26130950-26130969	None:intergenic	35.0%
	CATCTTCTGACTATCTTCTT+TGG	+	chr1_4:26130965-26130984	None:intergenic	35.0%
	CAAAGAAGATAGTCAGAAGA+TGG	-	chr1_4:26130963-26130982	Msa0157870:CDS	35.0%
!	TTAATAGGATTTGCTTGTGG+CGG	-	chr1_4:26131182-26131201	Msa0157870:CDS	35.0%
!!	ATCGGCATATGGATTAGAAA+GGG	-	chr1_4:26131215-26131234	Msa0157870:CDS	35.0%
	TGCATTGTCACCTTCTTCAT+TGG	-	chr1_4:26130169-26130188	Msa0157870:CDS	40.0%
	TCAAACTACAAACTTCCACC+AGG	-	chr1_4:26130217-26130236	Msa0157870:intron	40.0%
!	GACATGATGGTGAAAAAGGA+TGG	+	chr1_4:26130244-26130263	None:intergenic	40.0%
	GTTGCCAAAGAGGTGAAAAT+GGG	+	chr1_4:26130492-26130511	None:intergenic	40.0%
	TGTTGCCAAAGAGGTGAAAA+TGG	+	chr1_4:26130493-26130512	None:intergenic	40.0%
	TTCCTAAGATGTTGCCAAAG+AGG	+	chr1_4:26130502-26130521	None:intergenic	40.0%
	TTCTCTACCAAGACTCTTGA+TGG	-	chr1_4:26130541-26130560	Msa0157870:CDS	40.0%
	TTGACTTCCATCAAGAGTCT+TGG	+	chr1_4:26130551-26130570	None:intergenic	40.0%
	GGGTCAAAAATCTTCAACAC+TGG	+	chr1_4:26130799-26130818	None:intergenic	40.0%
	TGTGTCTTCTAATGCCTTGT+GGG	+	chr1_4:26130819-26130838	None:intergenic	40.0%
!	TAATAGGATTTGCTTGTGGC+GGG	-	chr1_4:26131183-26131202	Msa0157870:CDS	40.0%
!!	CATCGGCATATGGATTAGAA+AGG	-	chr1_4:26131214-26131233	Msa0157870:CDS	40.0%
	TGCATTGTCACCTTCTTCAT+TGG	-	chr1_4:26130169-26130188	Msa0157870:CDS	40.0%
	TCAAACTACAAACTTCCACC+AGG	-	chr1_4:26130217-26130236	Msa0157870:intron	40.0%
!	GACATGATGGTGAAAAAGGA+TGG	+	chr1_4:26130244-26130263	None:intergenic	40.0%
	GTTGCCAAAGAGGTGAAAAT+GGG	+	chr1_4:26130492-26130511	None:intergenic	40.0%
	TGTTGCCAAAGAGGTGAAAA+TGG	+	chr1_4:26130493-26130512	None:intergenic	40.0%
	TTCCTAAGATGTTGCCAAAG+AGG	+	chr1_4:26130502-26130521	None:intergenic	40.0%
	TTCTCTACCAAGACTCTTGA+TGG	-	chr1_4:26130541-26130560	Msa0157870:CDS	40.0%
	TTGACTTCCATCAAGAGTCT+TGG	+	chr1_4:26130551-26130570	None:intergenic	40.0%
	GGGTCAAAAATCTTCAACAC+TGG	+	chr1_4:26130799-26130818	None:intergenic	40.0%
	TGTGTCTTCTAATGCCTTGT+GGG	+	chr1_4:26130819-26130838	None:intergenic	40.0%
!	TAATAGGATTTGCTTGTGGC+GGG	-	chr1_4:26131183-26131202	Msa0157870:CDS	40.0%
!!	CATCGGCATATGGATTAGAA+AGG	-	chr1_4:26131214-26131233	Msa0157870:CDS	40.0%
!	GGCTAGTGCTATGCTCTTTT+TGG	-	chr1_4:26130141-26130160	Msa0157870:CDS	45.0%
	ATGGTGAAAAAGGATGGTCC+TGG	+	chr1_4:26130238-26130257	None:intergenic	45.0%
!	TCCTCCCATTTTCACCTCTT+TGG	-	chr1_4:26130485-26130504	Msa0157870:CDS	45.0%
	CACCTCTTTGGCAACATCTT+AGG	-	chr1_4:26130497-26130516	Msa0157870:CDS	45.0%
	TCCAACATCAACAGCTTCAC+CGG	+	chr1_4:26130632-26130651	None:intergenic	45.0%
!	TGTTGGAAGAGCTGCTTTCA+AGG	-	chr1_4:26130645-26130664	Msa0157870:CDS	45.0%
	GTGTGTCTTCTAATGCCTTG+TGG	+	chr1_4:26130820-26130839	None:intergenic	45.0%
	GGGCAATGAGTGAAGTAGTA+CGG	-	chr1_4:26131235-26131254	Msa0157870:CDS	45.0%
!	GGCTAGTGCTATGCTCTTTT+TGG	-	chr1_4:26130141-26130160	Msa0157870:CDS	45.0%
	ATGGTGAAAAAGGATGGTCC+TGG	+	chr1_4:26130238-26130257	None:intergenic	45.0%
!	TCCTCCCATTTTCACCTCTT+TGG	-	chr1_4:26130485-26130504	Msa0157870:CDS	45.0%
	CACCTCTTTGGCAACATCTT+AGG	-	chr1_4:26130497-26130516	Msa0157870:CDS	45.0%
	TCCAACATCAACAGCTTCAC+CGG	+	chr1_4:26130632-26130651	None:intergenic	45.0%
!	TGTTGGAAGAGCTGCTTTCA+AGG	-	chr1_4:26130645-26130664	Msa0157870:CDS	45.0%
	GTGTGTCTTCTAATGCCTTG+TGG	+	chr1_4:26130820-26130839	None:intergenic	45.0%
	GGGCAATGAGTGAAGTAGTA+CGG	-	chr1_4:26131235-26131254	Msa0157870:CDS	45.0%
	GTGAAAAAGGATGGTCCTGG+TGG	+	chr1_4:26130235-26130254	None:intergenic	50.0%
	GCCAAAGAGGTGAAAATGGG+AGG	+	chr1_4:26130489-26130508	None:intergenic	50.0%
	ACCGGTGAAGCTGTTGATGT+TGG	-	chr1_4:26130628-26130647	Msa0157870:CDS	50.0%
	TGACATGCTAGACGCCTTGT+TGG	-	chr1_4:26130933-26130952	Msa0157870:CDS	50.0%
	GGAACGGAAACATCGGCATA+TGG	-	chr1_4:26131204-26131223	Msa0157870:CDS	50.0%
	GTGAAAAAGGATGGTCCTGG+TGG	+	chr1_4:26130235-26130254	None:intergenic	50.0%
	GCCAAAGAGGTGAAAATGGG+AGG	+	chr1_4:26130489-26130508	None:intergenic	50.0%
	ACCGGTGAAGCTGTTGATGT+TGG	-	chr1_4:26130628-26130647	Msa0157870:CDS	50.0%
	TGACATGCTAGACGCCTTGT+TGG	-	chr1_4:26130933-26130952	Msa0157870:CDS	50.0%
	GGAACGGAAACATCGGCATA+TGG	-	chr1_4:26131204-26131223	Msa0157870:CDS	50.0%
!	GGATTTGCTTGTGGCGGGAA+CGG	-	chr1_4:26131188-26131207	Msa0157870:CDS	55.0%
!	TGTGGCGGGAACGGAAACAT+CGG	-	chr1_4:26131197-26131216	Msa0157870:CDS	55.0%
!	GGATTTGCTTGTGGCGGGAA+CGG	-	chr1_4:26131188-26131207	Msa0157870:CDS	55.0%
!	TGTGGCGGGAACGGAAACAT+CGG	-	chr1_4:26131197-26131216	Msa0157870:CDS	55.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	26130130	26131266	26130130	ID=Msa0157870;Name=Msa0157870
chr1_4	mRNA	26130130	26131266	26130130	ID=Msa0157870-mRNA-1;Parent=Msa0157870;Name=Msa0157870-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0\|1\|0\|1\|1\|1\|2\|0\|321
chr1_4	exon	26130382	26131266	26130382	ID=Msa0157870-mRNA-1:exon:8740;Parent=Msa0157870-mRNA-1
chr1_4	exon	26130130	26130207	26130130	ID=Msa0157870-mRNA-1:exon:8739;Parent=Msa0157870-mRNA-1
chr1_4	CDS	26130382	26131266	26130382	ID=Msa0157870-mRNA-1:cds;Parent=Msa0157870-mRNA-1
chr1_4	CDS	26130130	26130207	26130130	ID=Msa0157870-mRNA-1:cds;Parent=Msa0157870-mRNA-1

Gene Sequence

>Msa0157870

ATGGATTATATGGCTAGTGCTATGCTCTTTTTGGTGACATGCATTGTCACCTTCTTCATTGGTTCATTGCATGCAAGAAGCAGAAAATCAAACTACAAACTTCCACCAGGACCATCCTTTTTCACCATCATGTCACATGTTGTTGAATTGTACAACAAGCCACAACAAACACTTGCAGAATTTGCTAAGTTATATGGTCCTATTATGCGTATTAAGTTATGCACAGAAACTACCATAATCATCTCATCGTCACATATGGCCAAAGAGATTCTTTTTACAAATGATTCATTGTTCACTGATAGATCCGTTCCTGATAACACTACAACTCACAATCACAACAATTTTAGCTTAGTTTTCCTCCCATTTTCACCTCTTTGGCAACATCTTAGGAAAATATGTCATAATAATTTATTCTCTACCAAGACTCTTGATGGAAGTCAAGAACTTAGACGTATGAAATTGAAAGATCTTCTCAATGATATGCATAAAAGTAGCTTAACCGGTGAAGCTGTTGATGTTGGAAGAGCTGCTTTCAAGGCTTGCATTAATTTTTTGTCATATACTTTTGTGTCTCAAGATTTTGTTGAGAATTTAGATGATGAATATAAAAATATAGTGTCTACTCTATTAAGTGCTGTTGGAACACCAAATATTGCTGATCATTTCCCAGTGTTGAAGATTTTTGACCCACAAGGCATTAGAAGACACACAACTCTTTATGTTTCAAAAGTGTTCTATGCTTTGGATATCATAATTGACAAACGAATGAAAATGAGACAAAGTGAACAGTATATCTCAAAAAATGACATGCTAGACGCCTTGTTGGACATTTCCAAAGAAGATAGTCAGAAGATGGATAAAAGACAGATTAAGCATCTACTGCTTGATTTGCTTGTGGCGGGAACGGAAACATCGGCATATGGATTAGAAAGGGCAATGAGTGAAGTAGTACGGCATCCAGAG

Protein sequence

>Msa0157870

MDYMASAMLFLVTCIVTFFIGSLHARSRKSNYKLPPGPSFFTIMSHVVELYNKPQQTLAEFAKLYGPIMRIKLCTETTIIISSSHMAKEILFTNDSLFTDRSVPDNTTTHNHNNFSLVFLPFSPLWQHLRKICHNNLFSTKTLDGSQELRRMKLKDLLNDMHKSSLTGEAVDVGRAAFKACINFLSYTFVSQDFVENLDDEYKNIVSTLLSAVGTPNIADHFPVLKIFDPQGIRRHTTLYVSKVFYALDIIIDKRMKMRQSEQYISKNDMLDALLDISKEDSQKMDKRQIKHLLLDLLVAGTETSAYGLERAMSEVVRHPE