AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0035650

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035650 MtrunA17_Chr1g0197851 97.751 489 11 0 1 489 1 489 0.0 992
Msa0035650 MtrunA17_Chr1g0197881 97.336 488 12 1 1 488 1 487 0.0 981
Msa0035650 MtrunA17_Chr1g0197891 95.706 489 21 0 1 489 1 489 0.0 973
Msa0035650 MtrunA17_Chr1g0197871 89.278 485 52 0 1 485 1 485 0.0 902
Msa0035650 MtrunA17_Chr2g0314731 58.656 491 195 4 1 488 1 486 0.0 597
Msa0035650 MtrunA17_Chr2g0314721 58.607 488 195 3 3 487 13 496 0.0 593
Msa0035650 MtrunA17_Chr1g0176831 56.442 489 206 3 3 488 32 516 0.0 574
Msa0035650 MtrunA17_Chr5g0395321 55.230 478 204 4 1 475 7 477 0.0 551
Msa0035650 MtrunA17_Chr5g0395331 53.474 475 214 3 8 475 10 484 0.0 540
Msa0035650 MtrunA17_Chr1g0205361 53.333 480 220 3 1 477 1 479 0.0 539
Msa0035650 MtrunA17_Chr1g0160851 53.125 480 221 3 1 477 1 479 0.0 533
Msa0035650 MtrunA17_Chr8g0356001 51.969 508 223 8 1 487 1 508 0.0 517
Msa0035650 MtrunA17_Chr5g0395381 51.464 478 197 5 1 475 7 452 2.33e-175 501
Msa0035650 MtrunA17_Chr1g0205371 51.896 501 226 6 1 487 1 500 5.25e-175 501
Msa0035650 MtrunA17_Chr8g0355961 52.165 508 222 7 1 487 1 508 1.03e-174 501
Msa0035650 MtrunA17_Chr4g0039901 49.400 500 242 5 1 489 1 500 8.38e-174 498
Msa0035650 MtrunA17_Chr1g0164211 52.455 448 209 3 33 477 30 476 6.82e-166 478
Msa0035650 MtrunA17_Chr7g0246221 43.908 476 257 5 10 477 12 485 8.71e-146 427
Msa0035650 MtrunA17_Chr7g0246151 40.657 487 276 7 1 477 1 484 2.11e-126 377
Msa0035650 MtrunA17_Chr7g0246131 42.008 488 270 6 1 477 1 486 4.45e-126 377
Msa0035650 MtrunA17_Chr7g0246181 42.955 440 244 3 45 477 45 484 3.61e-122 367
Msa0035650 MtrunA17_Chr7g0246121 41.913 439 248 4 45 477 45 482 6.26e-122 366
Msa0035650 MtrunA17_Chr1g0160861 56.230 313 133 3 168 477 9 320 2.55e-121 358
Msa0035650 MtrunA17_Chr1g0200961 40.842 475 265 6 11 477 13 479 3.30e-113 343
Msa0035650 MtrunA17_Chr7g0265611 35.244 471 291 7 16 474 28 496 4.20e-101 313
Msa0035650 MtrunA17_Chr8g0344151 34.553 492 299 11 12 485 13 499 8.22e-98 304
Msa0035650 MtrunA17_Chr8g0344181 33.063 493 308 9 10 485 14 501 6.74e-97 302
Msa0035650 MtrunA17_Chr5g0444981 79.688 192 37 1 306 495 20 211 2.12e-95 288
Msa0035650 MtrunA17_Chr3g0086691 35.458 502 299 10 4 483 1 499 3.40e-93 292
Msa0035650 MtrunA17_Chr1g0176851 58.120 234 96 1 120 351 1 234 1.02e-92 281
Msa0035650 MtrunA17_Chr1g0213671 37.662 462 268 10 29 474 29 486 1.21e-92 291
Msa0035650 MtrunA17_Chr4g0057001 34.812 451 285 5 23 466 39 487 1.32e-92 291
Msa0035650 MtrunA17_Chr6g0484841 34.755 469 284 7 23 477 26 486 1.31e-91 288
Msa0035650 MtrunA17_Chr2g0310391 33.881 487 300 11 11 480 2 483 4.38e-91 286
Msa0035650 MtrunA17_Chr8g0344191 33.061 490 303 11 14 485 51 533 9.25e-91 287
Msa0035650 MtrunA17_Chr3g0086661 36.876 461 269 8 43 483 41 499 2.29e-90 285
Msa0035650 MtrunA17_Chr3g0086651 36.422 464 273 8 43 486 41 502 4.68e-90 284
Msa0035650 MtrunA17_Chr2g0310381 33.676 487 301 11 11 480 2 483 5.11e-89 281
Msa0035650 MtrunA17_Chr5g0430101 33.267 499 306 9 1 480 1 491 1.88e-88 280
Msa0035650 MtrunA17_Chr5g0430031 32.165 485 314 7 4 477 6 486 2.14e-88 280
Msa0035650 MtrunA17_Chr4g0061381 35.541 453 262 10 54 483 51 496 6.98e-88 278
Msa0035650 MtrunA17_Chr5g0403351 33.745 486 292 9 9 474 7 482 2.22e-87 277
Msa0035650 MtrunA17_Chr7g0258221 32.317 492 313 9 1 478 2 487 1.63e-86 275
Msa0035650 MtrunA17_Chr8g0390881 32.596 497 305 9 3 480 9 494 1.87e-86 275
Msa0035650 MtrunA17_Chr3g0094171 33.403 479 302 9 11 476 14 488 2.40e-86 275
Msa0035650 MtrunA17_Chr5g0430131 32.866 499 310 8 1 480 1 493 2.74e-86 274
Msa0035650 MtrunA17_Chr7g0235551 33.474 475 296 9 8 466 9 479 4.47e-86 274
Msa0035650 MtrunA17_Chr4g0056951 34.772 417 262 5 58 466 68 482 8.65e-85 271
Msa0035650 MtrunA17_Chr5g0430091 32.587 491 313 7 5 480 7 494 1.14e-84 270
Msa0035650 MtrunA17_Chr6g0484811 30.417 503 323 9 8 492 14 507 3.65e-84 269
Msa0035650 MtrunA17_Chr8g0382901 35.345 464 274 11 33 480 491 944 4.12e-84 279
Msa0035650 MtrunA17_Chr8g0382901 34.328 469 269 10 27 480 21 465 6.89e-77 259
Msa0035650 MtrunA17_Chr7g0255531 31.504 492 300 10 9 478 3 479 4.84e-84 268
Msa0035650 MtrunA17_Chr3g0094231 33.546 471 292 9 28 484 30 493 9.93e-84 268
Msa0035650 MtrunA17_Chr5g0431641 33.991 456 280 9 30 474 34 479 1.75e-83 267
Msa0035650 MtrunA17_Chr2g0314781 66.667 177 54 2 313 488 1 173 1.85e-83 255
Msa0035650 MtrunA17_Chr8g0372251 34.848 462 264 8 35 473 36 483 5.39e-83 266
Msa0035650 MtrunA17_Chr5g0403321 33.839 461 282 9 31 474 31 485 1.42e-81 262
Msa0035650 MtrunA17_Chr3g0101581 30.738 488 309 10 4 476 10 483 2.88e-81 261
Msa0035650 MtrunA17_Chr5g0431671 33.333 456 284 9 30 474 34 480 3.71e-81 261
Msa0035650 MtrunA17_Chr5g0405001 32.025 484 301 10 7 474 21 492 7.63e-81 260
Msa0035650 MtrunA17_Chr3g0101711 33.040 454 284 7 34 474 37 483 1.28e-80 259
Msa0035650 MtrunA17_Chr1g0174471 30.952 504 315 11 2 483 21 513 1.38e-80 260
Msa0035650 MtrunA17_Chr1g0174481 29.388 490 326 8 1 478 1 482 1.60e-80 259
Msa0035650 MtrunA17_Chr5g0445461 33.542 480 300 11 6 474 8 479 2.09e-80 259
Msa0035650 MtrunA17_Chr3g0101721 32.917 480 302 9 10 477 14 485 3.16e-80 258
Msa0035650 MtrunA17_Chr3g0101631 31.762 488 310 10 1 476 1 477 8.33e-80 257
Msa0035650 MtrunA17_Chr4g0035921 31.349 504 308 12 6 481 11 504 1.67e-79 257
Msa0035650 MtrunA17_Chr3g0101701 33.193 476 303 9 9 474 14 484 1.77e-79 256
Msa0035650 MtrunA17_Chr3g0101731 31.893 486 311 10 3 477 7 483 2.12e-79 256
Msa0035650 MtrunA17_Chr6g0466331 33.403 479 296 10 8 468 1 474 2.85e-79 256
Msa0035650 MtrunA17_Chr1g0174451 30.815 503 319 14 1 483 5 498 3.02e-79 256
Msa0035650 MtrunA17_Chr8g0361471 33.403 479 296 10 8 468 1 474 3.42e-79 256
Msa0035650 MtrunA17_Chr1g0174461 31.014 503 318 12 1 483 4 497 4.60e-79 255
Msa0035650 MtrunA17_Chr6g0465511 33.403 479 296 10 8 468 1 474 5.57e-79 255
Msa0035650 MtrunA17_Chr3g0116681 31.789 475 308 8 7 474 17 482 6.25e-79 255
Msa0035650 MtrunA17_Chr5g0445441 32.432 481 304 9 6 474 49 520 7.04e-79 256
Msa0035650 MtrunA17_Chr5g0445451 32.150 479 308 9 6 474 8 479 9.97e-79 254
Msa0035650 MtrunA17_Chr5g0430081 31.174 494 321 7 3 480 2 492 1.72e-78 254
Msa0035650 MtrunA17_Chr3g0101671 33.264 481 302 9 9 474 8 484 2.25e-78 254
Msa0035650 MtrunA17_Chr1g0174441 30.247 486 318 9 9 478 29 509 6.17e-78 253
Msa0035650 MtrunA17_Chr3g0101611 30.538 465 295 8 26 474 30 482 1.30e-77 251
Msa0035650 MtrunA17_Chr3g0101691 32.994 491 314 10 9 489 14 499 1.50e-77 251
Msa0035650 MtrunA17_Chr5g0403331 31.303 476 303 9 15 474 16 483 5.48e-77 250
Msa0035650 MtrunA17_Chr4g0011981 32.823 457 287 9 35 478 30 479 1.51e-76 248
Msa0035650 MtrunA17_Chr3g0101571 31.510 457 293 9 31 476 33 480 2.17e-76 248
Msa0035650 MtrunA17_Chr4g0011901 30.720 472 311 9 29 489 24 490 3.91e-76 247
Msa0035650 MtrunA17_Chr4g0020041 32.317 492 302 13 7 477 3 484 4.38e-76 248
Msa0035650 MtrunA17_Chr3g0116741 29.532 491 324 10 15 488 29 514 6.41e-76 248
Msa0035650 MtrunA17_Chr3g0101601 32.427 478 298 11 8 476 17 478 9.30e-76 246
Msa0035650 MtrunA17_Chr5g0446161 31.590 478 303 9 9 474 14 479 9.51e-76 246
Msa0035650 MtrunA17_Chr4g0030701 32.347 473 295 9 29 478 30 500 1.18e-75 247
Msa0035650 MtrunA17_Chr4g0011961 30.738 488 315 10 4 478 1 478 2.41e-75 245
Msa0035650 MtrunA17_Chr4g0024771 33.259 451 280 8 35 474 39 479 2.49e-75 245
Msa0035650 MtrunA17_Chr4g0058281 28.970 466 316 6 7 463 22 481 4.50e-75 245
Msa0035650 MtrunA17_Chr4g0030711 32.464 422 264 8 61 463 64 483 9.77e-75 244
Msa0035650 MtrunA17_Chr3g0101621 32.083 480 302 11 3 474 7 470 9.94e-75 244
Msa0035650 MtrunA17_Chr1g0162811 31.134 485 315 10 3 477 7 482 2.14e-74 243
Msa0035650 MtrunA17_Chr3g0101651 32.353 476 307 9 9 474 14 484 4.22e-74 243
Msa0035650 MtrunA17_Chr3g0101661 31.828 487 315 8 1 474 1 483 6.23e-74 242
Msa0035650 MtrunA17_Chr1g0156101 31.733 479 290 10 26 477 24 492 6.91e-74 242
Msa0035650 MtrunA17_Chr6g0463801 32.000 450 287 6 34 474 37 476 2.22e-73 240
Msa0035650 MtrunA17_Chr1g0207841 31.839 446 280 9 55 478 59 502 2.48e-73 241
Msa0035650 MtrunA17_Chr4g0076161 31.463 499 319 11 4 489 9 497 2.86e-73 240
Msa0035650 MtrunA17_Chr3g0101761 33.475 472 295 8 15 474 16 480 3.19e-73 240
Msa0035650 MtrunA17_Chr3g0101811 30.591 474 303 8 26 477 29 498 4.27e-73 240
Msa0035650 MtrunA17_Chr3g0084921 29.303 488 312 11 2 466 6 483 5.42e-73 239
Msa0035650 MtrunA17_Chr4g0047691 30.539 501 300 12 1 476 19 496 5.96e-73 240
Msa0035650 MtrunA17_Chr3g0101751 33.402 482 292 10 10 474 18 487 1.00e-72 239
Msa0035650 MtrunA17_Chr5g0419691 32.762 467 292 10 26 478 21 479 1.27e-72 238
Msa0035650 MtrunA17_Chr3g0101821 33.053 475 299 8 15 477 16 483 2.09e-72 238
Msa0035650 MtrunA17_Chr7g0224561 30.233 473 300 9 9 463 10 470 3.57e-72 238
Msa0035650 MtrunA17_Chr6g0472311 31.621 506 293 13 5 475 8 495 4.87e-72 237
Msa0035650 MtrunA17_Chr7g0254641 29.362 470 314 7 20 473 25 492 5.82e-72 237
Msa0035650 MtrunA17_Chr4g0058231 32.083 480 310 8 8 473 1 478 8.32e-72 236
Msa0035650 MtrunA17_Chr5g0445381 31.789 475 304 10 10 474 46 510 8.49e-72 237
Msa0035650 MtrunA17_Chr3g0101801 31.791 497 312 9 1 477 1 490 2.28e-71 235
Msa0035650 MtrunA17_Chr5g0445531 32.071 449 289 8 34 474 38 478 2.37e-71 235
Msa0035650 MtrunA17_Chr7g0224551 30.021 473 301 9 9 463 10 470 2.56e-71 235
Msa0035650 MtrunA17_Chr8g0362701 30.228 483 310 10 2 466 6 479 2.97e-71 235
Msa0035650 MtrunA17_Chr4g0047641 31.365 491 312 10 1 476 17 497 3.34e-71 235
Msa0035650 MtrunA17_Chr4g0058191 30.444 473 317 7 8 473 1 468 1.21e-70 233
Msa0035650 MtrunA17_Chr5g0430111 32.861 423 270 6 4 415 5 424 1.77e-70 231
Msa0035650 MtrunA17_Chr4g0011871 31.818 462 304 7 26 478 21 480 2.20e-70 232
Msa0035650 MtrunA17_Chr4g0011921 30.390 487 319 10 4 478 1 479 1.30e-69 230
Msa0035650 MtrunA17_Chr5g0419451 31.155 459 283 11 19 461 45 486 1.88e-69 231
Msa0035650 MtrunA17_Chr5g0401691 32.669 502 309 12 3 493 28 511 2.36e-69 230
Msa0035650 MtrunA17_Chr1g0162801 33.403 479 301 10 10 477 14 485 3.09e-69 229
Msa0035650 MtrunA17_Chr5g0431501 29.322 457 305 7 34 477 33 484 4.25e-69 229
Msa0035650 MtrunA17_Chr5g0431461 29.322 457 305 7 34 477 33 484 4.25e-69 229
Msa0035650 MtrunA17_Chr5g0445421 31.315 479 291 9 6 474 82 532 7.80e-69 230
Msa0035650 MtrunA17_Chr3g0101831 32.298 483 314 8 3 477 7 484 8.39e-69 228
Msa0035650 MtrunA17_Chr4g0047661 29.167 480 329 6 8 476 19 498 1.36e-68 228
Msa0035650 MtrunA17_Chr3g0101741 33.173 416 260 7 69 477 1 405 1.39e-68 226
Msa0035650 MtrunA17_Chr5g0446151 29.501 461 296 9 28 474 35 480 4.05e-68 226
Msa0035650 MtrunA17_Chr8g0357431 33.058 484 300 11 9 477 10 484 6.31e-68 226
Msa0035650 MtrunA17_Chr5g0431511 29.978 457 304 8 34 478 33 485 6.91e-68 226
Msa0035650 MtrunA17_Chr4g0039391 32.230 453 286 11 55 492 56 502 7.41e-68 226
Msa0035650 MtrunA17_Chr6g0463791 31.006 487 311 13 4 474 1 478 7.56e-68 226
Msa0035650 MtrunA17_Chr4g0047631 29.046 482 298 9 18 476 33 493 1.86e-67 225
Msa0035650 MtrunA17_Chr4g0046351 31.347 453 274 12 35 463 35 474 2.71e-67 225
Msa0035650 MtrunA17_Chr4g0058201 31.004 458 305 6 24 473 19 473 3.12e-67 224
Msa0035650 MtrunA17_Chr5g0401681 31.027 477 300 9 7 472 11 469 4.36e-67 224
Msa0035650 MtrunA17_Chr8g0362481 29.954 434 279 10 69 483 1 428 1.78e-66 221
Msa0035650 MtrunA17_Chr4g0046321 31.395 430 262 9 55 463 57 474 2.58e-66 222
Msa0035650 MtrunA17_Chr2g0296651 29.681 502 318 11 8 493 12 494 4.10e-66 221
Msa0035650 MtrunA17_Chr8g0357421 32.172 488 298 11 9 477 10 483 7.88e-66 221
Msa0035650 MtrunA17_Chr5g0406651 31.398 465 307 8 23 478 19 480 1.47e-65 219
Msa0035650 MtrunA17_Chr4g0046331 31.416 452 271 12 35 460 35 473 2.04e-65 220
Msa0035650 MtrunA17_Chr1g0167321 33.540 483 299 10 12 477 5 482 1.49e-64 217
Msa0035650 MtrunA17_Chr7g0218611 29.590 463 308 9 28 478 27 483 2.48e-64 216
Msa0035650 MtrunA17_Chr6g0451781 31.390 446 274 11 54 473 96 535 3.91e-64 218
Msa0035650 MtrunA17_Chr4g0058261 28.604 444 307 6 29 463 57 499 5.60e-64 216
Msa0035650 MtrunA17_Chr5g0430071 37.966 295 162 6 203 480 57 347 1.20e-63 211
Msa0035650 MtrunA17_Chr6g0451741 30.408 490 297 14 5 460 33 512 1.75e-63 216
Msa0035650 MtrunA17_Chr4g0052881 31.237 493 312 9 15 492 14 494 1.94e-63 214
Msa0035650 MtrunA17_Chr4g0017411 31.868 455 291 7 19 468 14 454 6.51e-63 213
Msa0035650 MtrunA17_Chr4g0053621 29.814 483 301 10 34 489 31 502 7.43e-63 213
Msa0035650 MtrunA17_Chr8g0377341 31.102 463 299 12 10 461 42 495 1.62e-62 213
Msa0035650 MtrunA17_Chr7g0218601 27.766 461 313 9 30 478 30 482 2.29e-62 211
Msa0035650 MtrunA17_Chr6g0451691 29.735 491 301 13 5 460 13 494 3.93e-62 211
Msa0035650 MtrunA17_Chr4g0052861 29.449 472 308 8 1 462 4 460 4.23e-62 211
Msa0035650 MtrunA17_Chr1g0156081 30.845 509 304 12 10 477 15 516 1.65e-61 210
Msa0035650 MtrunA17_Chr6g0451641 31.288 489 288 18 18 472 20 494 1.70e-61 209
Msa0035650 MtrunA17_Chr4g0052851 30.670 463 301 8 19 476 17 464 2.79e-61 208
Msa0035650 MtrunA17_Chr3g0082701 29.901 505 314 12 2 473 6 503 5.94e-61 208
Msa0035650 MtrunA17_Chr6g0451751 28.747 487 308 11 5 460 12 490 1.66e-60 207
Msa0035650 MtrunA17_Chr8g0339311 28.803 493 319 10 11 472 9 500 3.44e-60 206
Msa0035650 MtrunA17_Chr1g0198191 28.421 475 309 14 6 461 21 483 6.61e-60 205
Msa0035650 MtrunA17_Chr4g0008101 28.512 484 305 11 8 460 17 490 4.19e-59 203
Msa0035650 MtrunA17_Chr6g0451681 29.211 469 269 10 1 460 29 443 2.91e-58 200
Msa0035650 MtrunA17_Chr4g0011881 29.677 465 314 8 23 478 19 479 3.30e-58 200
Msa0035650 MtrunA17_Chr2g0280261 31.441 458 295 6 26 474 26 473 1.57e-57 198
Msa0035650 MtrunA17_Chr7g0258211 28.661 478 311 11 10 466 15 483 5.44e-57 197
Msa0035650 MtrunA17_Chr5g0431591 34.409 279 175 4 202 474 21 297 1.84e-55 188
Msa0035650 MtrunA17_Chr6g0466941 31.028 506 304 19 1 472 1 495 3.12e-55 193
Msa0035650 MtrunA17_Chr1g0156061 31.096 447 250 8 35 477 56 448 5.53e-55 191
Msa0035650 MtrunA17_Chr8g0346261 32.673 404 251 12 68 461 121 513 1.13e-54 192
Msa0035650 MtrunA17_Chr4g0046631 29.032 465 306 11 26 472 38 496 1.29e-53 188
Msa0035650 MtrunA17_Chr6g0466901 31.028 506 303 19 1 472 1 494 1.36e-53 188
Msa0035650 MtrunA17_Chr8g0351801 28.412 447 291 9 56 477 56 498 1.70e-53 188
Msa0035650 MtrunA17_Chr2g0310351 45.251 179 97 1 297 474 1 179 4.05e-52 175
Msa0035650 MtrunA17_Chr6g0458561 27.708 480 324 9 1 460 18 494 4.30e-52 184
Msa0035650 MtrunA17_Chr1g0200951 27.511 458 309 13 21 461 46 497 1.02e-51 183
Msa0035650 MtrunA17_Chr8g0339331 27.556 450 295 11 35 460 39 481 3.39e-51 182
Msa0035650 MtrunA17_Chr2g0304871 28.008 482 309 14 7 460 10 481 3.65e-51 182
Msa0035650 MtrunA17_Chr8g0390871 40.376 213 119 4 275 480 5 216 1.14e-50 172
Msa0035650 MtrunA17_Chr1g0174431 45.506 178 88 3 297 466 1 177 1.14e-50 172
Msa0035650 MtrunA17_Chr2g0314771 53.750 160 72 1 69 226 1 160 1.98e-50 169
Msa0035650 MtrunA17_Chr4g0058211 43.085 188 103 2 290 473 9 196 2.54e-50 171
Msa0035650 MtrunA17_Chr4g0011851 42.632 190 108 1 290 478 9 198 4.32e-50 170
Msa0035650 MtrunA17_Chr5g0423621 48.466 163 81 2 313 474 1 161 6.39e-50 169
Msa0035650 MtrunA17_Chr2g0296661 30.870 460 288 10 55 495 53 501 7.20e-50 178
Msa0035650 MtrunA17_Chr8g0370641 26.186 485 334 11 1 463 7 489 7.45e-50 178
Msa0035650 MtrunA17_Chr3g0107611 28.160 451 302 9 33 461 49 499 9.63e-50 178
Msa0035650 MtrunA17_Chr8g0370651 26.000 500 338 13 2 475 8 501 6.83e-49 176
Msa0035650 MtrunA17_Chr5g0432751 24.944 449 322 6 25 460 24 470 5.63e-48 173
Msa0035650 MtrunA17_Chr1g0210091 26.744 430 290 11 55 466 87 509 1.75e-47 172
Msa0035650 MtrunA17_Chr4g0011941 42.211 199 114 1 297 494 1 199 9.85e-47 161
Msa0035650 MtrunA17_Chr5g0446101 38.756 209 123 3 270 474 85 292 5.19e-46 162
Msa0035650 MtrunA17_Chr2g0280071 27.071 495 303 16 4 466 42 510 7.56e-45 167
Msa0035650 MtrunA17_Chr3g0101591 40.000 180 107 1 296 474 38 217 1.76e-44 156
Msa0035650 MtrunA17_Chr3g0107541 25.581 430 304 6 50 463 67 496 3.56e-44 163
Msa0035650 MtrunA17_Chr2g0280081 28.406 433 274 16 58 466 558 978 1.38e-43 165
Msa0035650 MtrunA17_Chr2g0280081 28.767 438 280 14 51 466 50 477 4.82e-40 154
Msa0035650 MtrunA17_Chr6g0451771 42.162 185 101 4 292 472 17 199 2.63e-43 153
Msa0035650 MtrunA17_Chr8g0364651 25.793 473 321 12 8 462 7 467 2.27e-42 157
Msa0035650 MtrunA17_Chr6g0451811 40.217 184 104 4 293 472 1 182 5.25e-42 149
Msa0035650 MtrunA17_Chr4g0046681 40.212 189 105 4 287 472 25 208 8.71e-42 149
Msa0035650 MtrunA17_Chr8g0387101 28.538 424 285 10 65 473 66 486 1.96e-41 155
Msa0035650 MtrunA17_Chr2g0280121 28.571 427 269 15 65 466 68 483 2.36e-41 155
Msa0035650 MtrunA17_Chr5g0413911 26.452 465 310 11 34 468 42 504 1.04e-40 153
Msa0035650 MtrunA17_Chr5g0409051 24.839 467 314 12 31 468 26 484 4.87e-40 151
Msa0035650 MtrunA17_Chr4g0074581 22.440 459 327 12 25 461 60 511 1.26e-39 150
Msa0035650 MtrunA17_Chr5g0445371 35.593 236 115 5 243 474 7 209 1.87e-39 143
Msa0035650 MtrunA17_Chr3g0086681 49.655 145 68 3 337 476 5 149 3.11e-39 140
Msa0035650 MtrunA17_Chr6g0477081 33.745 243 144 4 167 404 9 239 6.27e-39 141
Msa0035650 MtrunA17_Chr2g0280041 26.735 490 319 16 4 466 33 509 8.34e-39 148
Msa0035650 MtrunA17_Chr6g0463621 39.785 186 106 4 297 477 1 185 1.06e-38 140
Msa0035650 MtrunA17_Chr5g0402981 41.520 171 91 4 309 475 4 169 6.12e-38 137
Msa0035650 MtrunA17_Chr5g0445761 47.674 172 89 1 297 467 1 172 1.42e-37 137
Msa0035650 MtrunA17_Chr4g0046661 40.000 180 105 2 290 466 18 197 3.43e-37 136
Msa0035650 MtrunA17_Chr5g0445351 42.105 152 87 1 324 474 51 202 4.15e-37 135
Msa0035650 MtrunA17_Chr5g0444971 78.049 82 18 0 80 161 1 82 1.09e-36 130
Msa0035650 MtrunA17_Chr5g0430041 35.404 161 102 2 323 481 1 161 2.87e-36 132
Msa0035650 MtrunA17_Chr8g0364631 28.850 461 279 16 34 462 32 475 2.57e-35 138
Msa0035650 MtrunA17_Chr8g0381571 26.439 469 287 18 3 444 7 444 1.66e-34 135
Msa0035650 MtrunA17_Chr8g0381541 26.439 469 287 18 3 444 7 444 2.02e-34 135
Msa0035650 MtrunA17_Chr2g0334021 24.726 457 312 12 32 468 31 475 2.34e-34 135
Msa0035650 MtrunA17_Chr3g0101541 44.361 133 73 1 345 476 1 133 2.42e-34 125
Msa0035650 MtrunA17_Chr2g0280061 38.587 184 103 5 292 466 3 185 3.28e-33 125
Msa0035650 MtrunA17_Chr2g0280011 38.043 184 104 5 292 466 3 185 3.67e-33 125
Msa0035650 MtrunA17_Chr5g0430151 33.333 165 103 3 323 480 1 165 6.19e-32 120
Msa0035650 MtrunA17_Chr4g0076171 37.158 183 89 4 313 489 1 163 2.71e-29 113
Msa0035650 MtrunA17_Chr5g0445361 46.789 109 57 1 367 474 8 116 7.57e-29 110
Msa0035650 MtrunA17_Chr3g0117301 40.171 117 69 1 348 463 1 117 1.58e-28 109
Msa0035650 MtrunA17_Chr4g0046701 39.231 130 76 2 340 466 2 131 3.17e-28 110
Msa0035650 MtrunA17_Chr4g0030761 39.007 141 60 5 348 478 1 125 4.78e-28 108
Msa0035650 MtrunA17_Chr3g0107551 32.941 170 110 2 296 461 4 173 3.64e-27 108
Msa0035650 MtrunA17_Chr3g0105761 34.118 170 106 3 298 463 1 168 5.41e-26 105
Msa0035650 MtrunA17_Chr4g0028321 42.276 123 63 4 366 481 27 148 5.65e-26 103
Msa0035650 MtrunA17_Chr8g0351401 30.568 229 146 4 250 465 256 484 3.15e-25 108
Msa0035650 MtrunA17_Chr5g0430171 32.889 225 148 2 5 228 7 229 3.87e-25 103
Msa0035650 MtrunA17_Chr2g0293411 27.149 442 269 22 25 444 32 442 8.19e-25 107
Msa0035650 MtrunA17_Chr4g0030741 24.383 324 224 6 7 320 37 349 4.73e-24 103
Msa0035650 MtrunA17_Chr8g0339861 25.431 464 280 16 26 464 37 459 1.94e-23 103
Msa0035650 MtrunA17_Chr0c19g0493771 29.961 257 165 8 222 469 376 626 3.72e-23 103
Msa0035650 MtrunA17_Chr1g0174421 25.168 298 217 4 9 300 22 319 4.44e-23 100
Msa0035650 MtrunA17_Chr1g0204271 28.696 230 144 6 251 465 256 480 1.27e-22 100
Msa0035650 MtrunA17_Chr8g0351311 25.479 365 236 13 126 465 133 486 3.00e-22 99.8
Msa0035650 MtrunA17_Chr3g0135841 25.462 487 291 18 36 468 44 512 4.57e-22 99.4
Msa0035650 MtrunA17_Chr3g0116731 42.202 109 56 3 350 456 3 106 5.54e-22 92.0
Msa0035650 MtrunA17_Chr2g0293421 25.164 457 293 20 31 470 42 466 8.46e-22 98.2
Msa0035650 MtrunA17_Chr5g0400411 33.500 200 119 5 252 444 252 444 1.23e-21 97.8
Msa0035650 MtrunA17_Chr5g0400421 35.227 176 100 5 276 444 277 445 3.38e-21 96.3
Msa0035650 MtrunA17_Chr8g0351391 25.138 362 240 13 126 465 133 485 5.04e-21 95.9
Msa0035650 MtrunA17_Chr5g0396521 30.417 240 132 7 260 468 312 547 7.10e-21 95.9
Msa0035650 MtrunA17_Chr3g0113321 27.857 280 176 9 188 461 182 441 1.08e-20 94.7
Msa0035650 MtrunA17_Chr5g0443401 21.138 492 310 16 3 463 7 451 6.50e-20 92.4
Msa0035650 MtrunA17_Chr4g0004481 28.505 214 141 6 252 457 251 460 1.36e-19 91.7
Msa0035650 MtrunA17_Chr8g0351421 27.442 215 143 3 267 468 273 487 1.53e-19 91.7
Msa0035650 MtrunA17_Chr8g0351441 26.977 215 144 3 267 468 272 486 8.87e-19 89.4
Msa0035650 MtrunA17_Chr5g0403931 26.694 487 290 23 3 463 9 454 1.87e-18 88.2
Msa0035650 MtrunA17_Chr1g0176861 46.067 89 48 0 3 91 6 94 2.57e-18 80.1
Msa0035650 MtrunA17_Chr2g0313821 26.222 225 152 6 249 463 269 489 2.93e-18 87.4
Msa0035650 MtrunA17_Chr3g0089361 28.507 221 149 6 248 465 239 453 3.28e-18 87.4
Msa0035650 MtrunA17_Chr4g0011861 30.201 149 103 1 26 173 21 169 3.66e-18 85.1
Msa0035650 MtrunA17_Chr8g0351461 28.837 215 140 5 267 468 272 486 4.62e-18 87.0
Msa0035650 MtrunA17_Chr5g0445751 30.220 182 121 4 3 183 14 190 6.17e-18 84.7
Msa0035650 MtrunA17_Chr5g0429651 30.729 192 118 5 268 444 271 462 1.29e-17 85.5
Msa0035650 MtrunA17_Chr3g0141801 22.899 476 312 15 10 463 15 457 1.35e-17 85.5
Msa0035650 MtrunA17_Chr3g0089351 27.679 224 147 6 248 465 157 371 1.51e-17 84.7
Msa0035650 MtrunA17_Chr8g0372591 30.827 133 87 2 295 422 1 133 2.03e-17 79.0
Msa0035650 MtrunA17_Chr4g0056981 50.704 71 35 0 323 393 1 71 2.37e-17 76.6
Msa0035650 MtrunA17_Chr2g0321171 27.230 213 146 4 251 460 261 467 2.45e-17 84.7
Msa0035650 MtrunA17_Chr1g0179811 23.168 423 297 13 58 463 101 512 4.51e-17 84.0
Msa0035650 MtrunA17_Chr1g0203141 28.054 221 143 9 251 463 276 488 5.70e-17 83.6
Msa0035650 MtrunA17_Chr3g0107511 22.574 505 326 16 4 482 1 466 1.24e-16 82.4
Msa0035650 MtrunA17_Chr5g0443731 27.354 223 148 5 248 463 231 446 1.26e-16 82.4
Msa0035650 MtrunA17_Chr2g0313771 26.829 246 167 6 228 463 254 496 1.44e-16 82.4
Msa0035650 MtrunA17_Chr1g0151221 30.568 229 144 9 248 468 283 504 1.95e-16 82.0
Msa0035650 MtrunA17_Chr8g0387001 31.892 185 114 5 272 444 275 459 2.03e-16 82.0
Msa0035650 MtrunA17_Chr7g0248991 30.500 200 126 7 222 414 158 351 2.49e-16 80.5
Msa0035650 MtrunA17_Chr2g0313831 26.840 231 154 8 244 463 263 489 2.68e-16 81.6
Msa0035650 MtrunA17_Chr2g0313751 24.900 249 174 6 225 463 271 516 2.89e-16 81.6
Msa0035650 MtrunA17_Chr2g0313761 24.024 333 213 9 144 465 183 486 2.99e-16 81.3
Msa0035650 MtrunA17_Chr8g0381551 23.631 347 217 14 3 327 7 327 3.72e-16 79.7
Msa0035650 MtrunA17_Chr1g0207851 25.100 251 169 7 61 295 65 312 5.42e-16 79.3
Msa0035650 MtrunA17_Chr1g0204241 28.713 202 134 6 268 463 72 269 5.55e-16 78.6
Msa0035650 MtrunA17_Chr4g0026941 30.899 178 120 3 286 460 331 508 6.88e-16 80.5
Msa0035650 MtrunA17_Chr7g0235261 28.440 218 142 6 252 459 266 479 6.90e-16 80.1
Msa0035650 MtrunA17_Chr3g0107501 29.808 208 132 5 266 465 252 453 7.14e-16 80.1
Msa0035650 MtrunA17_Chr4g0011931 27.389 157 109 3 4 158 1 154 7.83e-16 78.2
Msa0035650 MtrunA17_Chr1g0203151 28.000 225 144 10 251 466 272 487 9.99e-16 79.7
Msa0035650 MtrunA17_Chr2g0313781 28.070 228 144 8 249 463 281 501 1.35e-15 79.3
Msa0035650 MtrunA17_Chr5g0423601 39.024 82 50 0 117 198 1 82 1.56e-15 72.0
Msa0035650 MtrunA17_Chr2g0307291 24.118 340 218 10 135 463 181 491 1.58e-15 79.0
Msa0035650 MtrunA17_Chr5g0397971 20.940 468 322 15 11 462 9 444 1.69e-15 79.0
Msa0035650 MtrunA17_Chr8g0334941 28.241 216 146 5 266 473 97 311 2.26e-15 77.4
Msa0035650 MtrunA17_Chr1g0163281 27.155 232 154 7 248 466 266 495 2.53e-15 78.6
Msa0035650 MtrunA17_Chr3g0078411 26.818 220 151 6 251 466 229 442 2.59e-15 78.2
Msa0035650 MtrunA17_Chr4g0063221 28.218 202 140 4 296 493 324 524 2.80e-15 78.2
Msa0035650 MtrunA17_Chr2g0313791 25.249 301 197 10 173 463 202 484 2.81e-15 78.2
Msa0035650 MtrunA17_Chr4g0046691 25.000 268 189 6 26 288 30 290 3.54e-15 76.3
Msa0035650 MtrunA17_Chr6g0449381 25.877 228 160 6 251 469 257 484 3.81e-15 77.8
Msa0035650 MtrunA17_Chr2g0313801 27.014 211 136 6 266 463 284 489 4.31e-15 77.8
Msa0035650 MtrunA17_Chr1g0176841 61.538 52 16 1 437 488 1 48 5.35e-15 69.3
Msa0035650 MtrunA17_Chr6g0472221 28.378 222 143 7 251 463 285 499 6.38e-15 77.4
Msa0035650 MtrunA17_Chr7g0227281 24.771 218 156 5 248 457 245 462 9.12e-15 76.6
Msa0035650 MtrunA17_Chr6g0463611 22.378 286 203 9 3 282 22 294 9.62e-15 75.5
Msa0035650 MtrunA17_Chr3g0104351 27.835 194 123 5 268 444 277 470 9.71e-15 76.6
Msa0035650 MtrunA17_Chr2g0307301 25.617 324 194 11 154 463 201 491 1.29e-14 76.3
Msa0035650 MtrunA17_Chr6g0449361 25.472 212 148 5 268 469 271 482 1.36e-14 76.3
Msa0035650 MtrunA17_Chr6g0449341 27.000 200 137 5 269 459 333 532 1.36e-14 76.3
Msa0035650 MtrunA17_Chr4g0038271 23.651 241 168 6 246 470 302 542 2.12e-14 75.9
Msa0035650 MtrunA17_Chr4g0004601 27.982 218 143 6 252 459 287 500 2.37e-14 75.5
Msa0035650 MtrunA17_Chr2g0313811 26.316 228 148 8 249 463 281 501 3.71e-14 74.7
Msa0035650 MtrunA17_Chr7g0260821 24.434 221 151 6 246 459 259 470 4.21e-14 74.7
Msa0035650 MtrunA17_Chr7g0227291 25.455 220 152 6 248 457 245 462 4.23e-14 74.7
Msa0035650 MtrunA17_Chr1g0163371 27.835 194 129 5 282 466 7 198 4.82e-14 71.6
Msa0035650 MtrunA17_Chr6g0449351 25.225 222 155 6 259 469 221 442 5.41e-14 74.3
Msa0035650 MtrunA17_Chr8g0348751 31.551 187 114 6 272 444 278 464 5.94e-14 74.3
Msa0035650 MtrunA17_Chr6g0479681 25.210 238 150 10 251 466 274 505 7.58e-14 73.9
Msa0035650 MtrunA17_Chr1g0184421 23.779 307 211 8 173 470 192 484 7.77e-14 73.9
Msa0035650 MtrunA17_Chr2g0310371 27.778 144 101 1 11 151 2 145 9.69e-14 68.6
Msa0035650 MtrunA17_Chr5g0446131 24.390 246 173 6 228 463 245 487 1.38e-13 73.2
Msa0035650 MtrunA17_Chr4g0044841 27.619 210 141 5 259 463 242 445 1.45e-13 72.8
Msa0035650 MtrunA17_Chr5g0431631 32.394 142 89 2 2 141 23 159 1.45e-13 68.6
Msa0035650 MtrunA17_Chr3g0107561 24.407 295 209 5 5 285 14 308 1.83e-13 71.6
Msa0035650 MtrunA17_Chr1g0163511 26.728 217 144 7 255 459 275 488 1.94e-13 72.4
Msa0035650 MtrunA17_Chr5g0445411 29.221 154 106 2 10 161 22 174 2.12e-13 68.6
Msa0035650 MtrunA17_Chr2g0288661 23.984 246 174 6 228 463 249 491 2.42e-13 72.4
Msa0035650 MtrunA17_Chr7g0262111 22.883 437 288 13 43 463 75 478 3.35e-13 71.6
Msa0035650 MtrunA17_Chr1g0184461 25.773 194 132 5 286 470 294 484 4.67e-13 71.2
Msa0035650 MtrunA17_Chr7g0260831 24.215 223 149 7 246 459 258 469 4.78e-13 71.2
Msa0035650 MtrunA17_Chr8g0380501 28.500 200 127 6 251 436 240 437 5.76e-13 70.9
Msa0035650 MtrunA17_Chr1g0163451 24.623 199 141 5 277 466 302 500 9.44e-13 70.5
Msa0035650 MtrunA17_Chr5g0430051 41.489 94 53 1 8 101 14 105 1.13e-12 64.7
Msa0035650 MtrunA17_Chr7g0246141 34.545 110 66 2 201 307 5 111 1.54e-12 64.3
Msa0035650 MtrunA17_Chr1g0163391 27.477 222 143 7 259 466 261 478 1.73e-12 69.7
Msa0035650 MtrunA17_Chr1g0163421 23.684 190 138 4 284 466 327 516 3.70e-12 68.6
Msa0035650 MtrunA17_Chr3g0081401 32.075 159 87 6 341 478 20 178 4.88e-12 65.1
Msa0035650 MtrunA17_Chr5g0423611 34.211 76 50 0 210 285 1 76 8.24e-12 61.2
Msa0035650 MtrunA17_Chr5g0404861 34.146 123 77 3 343 464 17 136 1.54e-11 62.8
Msa0035650 MtrunA17_Chr8g0354541 28.378 148 102 4 318 463 6 151 1.75e-11 63.2
Msa0035650 MtrunA17_Chr8g0371761 26.712 146 92 3 316 446 1 146 7.30e-11 60.5
Msa0035650 MtrunA17_Chr3g0117321 27.119 118 86 0 33 150 6 123 8.93e-11 59.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035650 AT3G61040.1 42.266 459 253 5 25 476 24 477 1.88e-131 390
Msa0035650 AT2G45550.1 39.959 488 281 6 1 476 1 488 4.78e-131 390
Msa0035650 AT2G45560.1 38.855 489 285 6 1 476 1 488 5.18e-122 367
Msa0035650 AT2G45570.1 40.286 489 279 6 1 476 1 489 1.56e-121 365
Msa0035650 AT1G33720.1 37.295 488 294 6 1 476 1 488 1.25e-116 353
Msa0035650 AT2G45580.1 40.406 443 253 4 44 476 48 489 1.30e-116 353
Msa0035650 AT5G07990.1 34.921 504 301 13 4 486 1 498 5.97e-95 297
Msa0035650 AT1G33730.1 40.580 345 198 3 137 474 6 350 4.67e-94 290
Msa0035650 AT1G33730.2 40.580 345 198 3 137 474 6 350 4.67e-94 290
Msa0035650 AT1G33720.4 40.503 358 200 5 129 476 2 356 6.67e-92 285
Msa0035650 AT1G33720.3 40.503 358 200 5 129 476 2 356 6.67e-92 285
Msa0035650 AT1G33720.5 40.503 358 200 5 129 476 2 356 6.67e-92 285
Msa0035650 AT2G45580.2 41.916 334 183 4 153 476 3 335 9.42e-92 284
Msa0035650 AT5G44620.1 32.981 473 306 4 1 466 17 485 2.49e-90 285
Msa0035650 AT3G52970.1 33.809 491 300 11 3 477 14 495 2.53e-89 283
Msa0035650 AT3G61040.2 39.142 373 216 4 25 391 24 391 5.03e-89 278
Msa0035650 AT3G26310.1 33.540 483 297 8 8 478 9 479 6.58e-89 281
Msa0035650 AT4G12300.1 33.691 466 299 5 10 466 18 482 1.38e-88 281
Msa0035650 AT4G12320.1 33.475 469 298 5 10 466 18 484 1.52e-88 281
Msa0035650 AT3G26300.1 32.535 501 316 8 4 492 1 491 2.27e-88 280
Msa0035650 AT4G12330.1 35.024 414 259 5 61 466 73 484 1.91e-87 278
Msa0035650 AT3G52970.2 32.871 505 300 11 3 477 14 509 4.72e-87 277
Msa0035650 AT4G12310.1 35.392 421 258 5 58 466 68 486 1.30e-85 273
Msa0035650 AT4G22710.1 35.280 411 253 6 65 466 85 491 1.86e-84 270
Msa0035650 AT5G25120.1 31.388 497 314 9 3 485 5 488 2.17e-84 269
Msa0035650 AT5G25140.1 31.976 491 315 8 9 485 3 488 5.49e-84 268
Msa0035650 AT4G22690.1 35.280 411 253 6 65 466 116 522 1.05e-83 269
Msa0035650 AT3G26330.1 33.333 462 289 6 29 478 26 480 1.13e-83 268
Msa0035650 AT1G33720.2 36.815 383 204 6 129 476 2 381 2.17e-83 264
Msa0035650 AT5G25180.1 32.645 484 303 10 18 485 12 488 9.74e-83 265
Msa0035650 AT3G26320.1 31.237 477 306 6 14 478 14 480 2.88e-82 264
Msa0035650 AT5G57260.1 32.328 464 295 7 27 476 23 481 2.04e-81 262
Msa0035650 AT5G25130.1 32.530 498 307 9 3 485 5 488 4.47e-80 258
Msa0035650 AT3G26180.1 31.837 490 305 10 7 476 2 482 2.13e-78 254
Msa0035650 AT1G13080.1 31.405 484 319 7 4 476 1 482 2.29e-78 254
Msa0035650 AT5G06900.1 31.643 493 318 9 1 483 2 485 2.66e-78 254
Msa0035650 AT2G40890.1 30.691 492 307 8 6 478 2 478 2.94e-78 254
Msa0035650 AT4G13770.1 31.250 480 303 12 12 475 11 479 9.29e-77 249
Msa0035650 AT2G45580.3 37.360 356 213 3 44 390 48 402 9.61e-77 246
Msa0035650 AT4G31500.1 32.645 484 292 14 11 475 10 478 4.69e-76 248
Msa0035650 AT3G26170.1 30.612 490 311 10 7 476 2 482 2.03e-75 246
Msa0035650 AT3G26280.1 32.272 471 303 8 18 476 16 482 2.48e-74 243
Msa0035650 AT3G26280.2 32.272 471 303 8 18 476 33 499 3.50e-74 243
Msa0035650 AT4G36220.1 30.568 458 286 8 41 475 47 495 5.05e-74 243
Msa0035650 AT3G26290.1 32.903 465 293 5 26 478 23 480 6.34e-74 242
Msa0035650 AT3G26290.2 32.903 465 293 5 26 478 36 493 1.33e-73 241
Msa0035650 AT4G37410.1 32.328 464 288 10 27 478 23 472 1.70e-73 241
Msa0035650 AT2G02580.1 32.359 479 308 7 9 478 9 480 2.59e-73 240
Msa0035650 AT5G67310.1 31.612 484 313 10 9 483 18 492 7.24e-73 239
Msa0035650 AT1G74550.1 28.903 474 315 7 8 473 1 460 3.61e-72 237
Msa0035650 AT1G74540.1 29.638 469 300 8 8 461 1 454 5.48e-72 237
Msa0035650 AT3G26160.1 30.977 481 313 7 9 476 8 482 7.90e-72 237
Msa0035650 AT3G26150.1 29.328 491 330 8 9 488 8 492 1.50e-71 236
Msa0035650 AT3G26270.1 32.759 464 293 9 26 476 24 481 1.53e-71 236
Msa0035650 AT3G48280.1 31.236 461 304 7 8 463 4 456 5.24e-71 234
Msa0035650 AT1G13110.1 30.724 511 322 10 7 495 2 502 7.22e-71 234
Msa0035650 AT4G13290.1 30.719 459 302 7 22 475 21 468 9.16e-71 233
Msa0035650 AT5G04330.1 30.737 475 295 12 35 484 33 498 1.19e-70 234
Msa0035650 AT2G30770.1 32.432 444 280 11 34 466 33 467 3.51e-70 232
Msa0035650 AT4G13310.1 29.067 461 315 7 22 475 20 475 5.13e-70 232
Msa0035650 AT4G37360.1 31.687 486 298 12 4 473 1 468 1.17e-69 231
Msa0035650 AT4G37340.1 31.518 514 310 17 1 493 1 493 2.06e-69 230
Msa0035650 AT4G37430.1 30.417 480 303 12 8 468 1 468 6.84e-69 229
Msa0035650 AT3G26210.1 31.072 457 287 8 43 481 40 486 9.50e-69 228
Msa0035650 AT5G57220.1 31.006 487 306 13 1 478 1 466 1.06e-67 226
Msa0035650 AT4G31940.1 30.874 515 316 13 4 483 1 510 2.07e-67 226
Msa0035650 AT4G37310.1 30.818 477 308 9 7 466 3 474 3.38e-67 225
Msa0035650 AT2G24180.1 31.236 445 290 7 29 462 31 470 3.56e-67 224
Msa0035650 AT4G37370.1 32.661 496 290 17 7 483 9 479 2.99e-66 222
Msa0035650 AT5G36220.1 30.567 494 312 12 7 483 8 487 1.11e-65 220
Msa0035650 AT4G37330.1 30.200 500 317 14 10 493 6 489 1.82e-65 219
Msa0035650 AT3G26230.1 30.689 479 312 8 15 476 3 478 2.16e-65 219
Msa0035650 AT3G48310.1 28.894 443 299 9 26 463 26 457 6.37e-65 218
Msa0035650 AT1G13090.2 31.915 470 278 10 28 472 22 474 7.15e-65 218
Msa0035650 AT1G01280.1 28.728 456 310 5 43 483 41 496 1.43e-64 218
Msa0035650 AT3G48270.1 28.112 466 313 9 8 463 3 456 3.78e-64 216
Msa0035650 AT3G28740.1 33.333 453 267 12 26 462 33 466 4.41e-64 216
Msa0035650 AT4G37400.1 31.765 425 265 11 60 472 57 468 6.40e-64 216
Msa0035650 AT2G42250.1 29.228 479 309 9 7 466 17 484 1.19e-63 215
Msa0035650 AT3G26190.1 32.623 469 293 8 24 476 18 479 1.73e-63 214
Msa0035650 AT4G31970.1 29.070 516 327 12 4 485 1 511 2.57e-63 215
Msa0035650 AT1G11610.1 31.947 457 289 11 34 475 33 482 3.47e-63 214
Msa0035650 AT2G23220.1 29.590 463 296 9 28 476 40 486 5.29e-63 214
Msa0035650 AT1G11610.2 31.947 457 289 11 34 475 33 482 5.38e-63 213
Msa0035650 AT3G44250.1 33.261 460 289 8 30 476 24 478 1.93e-62 212
Msa0035650 AT3G26200.1 31.749 463 293 8 30 476 24 479 3.59e-62 211
Msa0035650 AT3G48290.1 29.279 444 300 8 24 463 25 458 3.95e-62 211
Msa0035650 AT4G37320.1 29.307 505 317 17 7 493 10 492 4.30e-62 211
Msa0035650 AT1G74110.1 29.718 461 297 13 23 461 52 507 4.65e-62 212
Msa0035650 AT5G06905.1 29.072 485 320 8 1 465 1 481 6.31e-62 211
Msa0035650 AT5G10600.1 28.968 504 321 15 8 496 23 504 8.87e-62 211
Msa0035650 AT5G24950.1 29.083 447 308 6 34 474 32 475 1.03e-61 210
Msa0035650 AT3G53280.1 31.947 457 298 7 30 476 24 477 2.30e-61 209
Msa0035650 AT3G48300.1 29.099 433 291 10 36 462 31 453 3.98e-61 208
Msa0035650 AT3G48300.2 29.099 433 291 10 36 462 33 455 4.17e-61 208
Msa0035650 AT1G13710.1 31.735 438 277 13 36 461 55 482 8.16e-61 208
Msa0035650 AT2G46660.1 30.719 459 297 12 18 466 55 502 1.14e-60 208
Msa0035650 AT2G23190.1 29.263 475 309 10 1 462 42 502 1.82e-60 207
Msa0035650 AT3G20140.1 28.603 451 298 12 29 465 37 477 2.56e-60 206
Msa0035650 AT1G01190.1 30.998 471 295 14 18 473 56 511 2.76e-60 207
Msa0035650 AT1G01190.2 30.998 471 295 14 18 473 61 516 3.13e-60 207
Msa0035650 AT1G66540.1 35.340 382 218 11 117 483 1 368 3.53e-60 202
Msa0035650 AT3G48320.1 30.128 468 311 9 1 463 1 457 7.49e-60 205
Msa0035650 AT3G53300.1 32.035 462 287 10 33 476 27 479 1.50e-59 204
Msa0035650 AT5G35715.1 31.591 421 271 10 69 476 1 417 1.93e-59 202
Msa0035650 AT1G13080.2 33.628 339 212 7 149 476 28 364 3.36e-59 200
Msa0035650 AT3G26830.1 28.660 485 319 9 4 472 1 474 9.91e-59 202
Msa0035650 AT2G25160.1 31.288 489 295 13 4 460 1 480 1.33e-58 202
Msa0035650 AT2G30750.1 32.127 442 284 9 34 466 33 467 1.42e-58 201
Msa0035650 AT3G20130.1 28.770 431 272 9 56 465 65 481 2.72e-58 201
Msa0035650 AT4G15360.1 28.992 476 307 10 9 464 13 477 5.55e-58 201
Msa0035650 AT3G26220.1 31.702 470 303 9 28 483 23 488 6.42e-58 200
Msa0035650 AT5G10610.1 27.898 509 317 16 3 494 11 486 3.05e-57 198
Msa0035650 AT3G61880.1 31.403 449 282 13 28 461 60 497 4.19e-57 198
Msa0035650 AT3G61880.2 31.403 449 282 13 28 461 60 497 5.01e-57 199
Msa0035650 AT4G15350.1 28.670 436 287 10 46 465 48 475 5.28e-57 197
Msa0035650 AT5G42590.1 29.263 475 309 9 8 466 4 467 6.04e-57 197
Msa0035650 AT2G14100.1 27.833 503 319 13 9 484 21 506 7.49e-57 197
Msa0035650 AT5G42580.1 28.436 422 277 9 54 465 60 466 1.57e-56 196
Msa0035650 AT3G48290.2 27.660 470 300 9 24 463 25 484 1.87e-56 196
Msa0035650 AT4G15330.1 28.898 481 309 16 6 466 8 475 2.27e-56 196
Msa0035650 AT1G50520.1 29.655 435 284 11 43 461 52 480 2.58e-56 196
Msa0035650 AT3G20940.1 27.664 488 323 13 14 484 25 499 6.15e-56 195
Msa0035650 AT5G24960.1 30.201 447 299 8 26 464 25 466 1.17e-55 194
Msa0035650 AT3G20950.1 26.962 497 327 14 1 473 7 491 1.21e-55 194
Msa0035650 AT3G32047.1 27.626 438 297 9 54 481 63 490 2.00e-55 193
Msa0035650 AT1G66540.2 37.460 315 175 9 177 483 9 309 1.80e-54 186
Msa0035650 AT5G36220.2 37.627 295 165 6 196 483 59 341 2.24e-54 186
Msa0035650 AT3G20090.2 28.935 432 272 10 55 465 65 482 2.32e-54 191
Msa0035650 AT3G25180.1 29.496 417 277 7 56 460 63 474 7.81e-54 189
Msa0035650 AT4G31950.1 29.328 491 299 12 4 462 1 475 8.69e-54 189
Msa0035650 AT3G26180.2 38.956 249 139 5 238 476 103 348 9.03e-54 185
Msa0035650 AT1G13100.1 30.072 419 264 8 65 463 56 465 3.74e-53 187
Msa0035650 AT3G20960.2 28.375 437 276 10 60 476 68 487 9.14e-53 186
Msa0035650 AT1G79370.1 28.205 507 321 15 1 466 1 505 9.78e-53 187
Msa0035650 AT1G50560.1 28.319 452 294 12 56 484 66 510 2.15e-52 186
Msa0035650 AT3G10560.1 27.140 479 322 14 1 461 11 480 2.45e-52 185
Msa0035650 AT2G27000.1 27.294 436 295 10 44 465 52 479 2.74e-52 185
Msa0035650 AT5G47990.1 28.842 423 276 11 55 461 64 477 4.70e-52 184
Msa0035650 AT5G09970.1 27.992 493 325 19 1 473 33 515 4.75e-52 185
Msa0035650 AT5G04660.1 28.986 414 276 10 61 461 71 479 5.15e-52 184
Msa0035650 AT3G20080.2 27.938 451 300 10 31 464 39 481 1.22e-51 183
Msa0035650 AT3G20080.1 27.938 451 300 10 31 464 39 481 1.22e-51 183
Msa0035650 AT4G15380.1 27.119 413 284 8 60 462 69 474 2.26e-51 182
Msa0035650 AT3G20100.1 25.567 485 337 12 6 472 8 486 5.01e-51 182
Msa0035650 AT3G20110.1 27.079 469 320 12 10 465 12 471 2.87e-50 179
Msa0035650 AT5G04630.1 27.719 469 311 15 11 461 18 476 1.62e-49 177
Msa0035650 AT3G20120.4 27.040 429 284 12 55 465 63 480 2.02e-49 177
Msa0035650 AT4G39950.1 27.235 481 327 9 3 463 25 502 3.58e-49 177
Msa0035650 AT2G22330.1 28.041 485 319 13 3 463 26 504 6.87e-49 176
Msa0035650 AT2G22330.2 27.386 482 326 11 3 463 49 527 8.79e-49 176
Msa0035650 AT4G39950.2 27.235 481 327 9 3 463 65 542 9.59e-49 177
Msa0035650 AT5G05260.2 27.033 455 307 9 31 461 37 490 1.53e-48 175
Msa0035650 AT3G10570.1 28.641 412 275 11 63 461 75 480 2.07e-48 174
Msa0035650 AT1G28430.1 27.329 483 323 11 1 465 7 479 3.51e-48 174
Msa0035650 AT3G20960.1 30.189 371 224 10 116 465 21 377 5.81e-47 168
Msa0035650 AT1G58260.1 25.510 490 333 12 5 466 8 493 8.99e-47 170
Msa0035650 AT1G64940.1 26.680 491 327 12 4 468 1 484 9.34e-47 170
Msa0035650 AT4G15330.2 30.854 363 221 14 121 466 98 447 2.17e-46 168
Msa0035650 AT1G11600.1 26.471 476 322 12 8 461 9 478 6.36e-46 167
Msa0035650 AT3G20130.2 26.840 462 274 11 26 465 34 453 1.18e-44 164
Msa0035650 AT2G30490.1 24.940 417 300 5 55 460 55 469 2.03e-44 163
Msa0035650 AT4G13310.2 26.738 374 266 4 22 390 20 390 2.06e-44 161
Msa0035650 AT3G20090.1 30.447 358 214 10 129 465 1 344 1.11e-43 159
Msa0035650 AT2G27010.1 25.328 458 294 13 44 485 48 473 4.85e-43 159
Msa0035650 AT1G16410.1 24.078 515 351 11 8 482 16 530 5.79e-43 160
Msa0035650 AT5G05260.1 25.714 455 281 10 31 461 37 458 3.03e-42 157
Msa0035650 AT3G20120.2 28.045 353 229 10 129 465 1 344 7.60e-42 154
Msa0035650 AT3G20120.3 28.045 353 229 10 129 465 1 344 7.60e-42 154
Msa0035650 AT3G20120.1 28.045 353 229 10 129 465 1 344 7.60e-42 154
Msa0035650 AT1G64930.1 27.389 471 296 16 30 468 28 484 8.02e-41 154
Msa0035650 AT1G16400.1 24.800 500 335 12 10 475 17 509 5.20e-40 152
Msa0035650 AT3G20080.4 28.531 354 225 9 129 464 1 344 8.14e-40 148
Msa0035650 AT3G20080.5 28.531 354 225 9 129 464 1 344 8.14e-40 148
Msa0035650 AT3G20080.6 28.531 354 225 9 129 464 1 344 8.14e-40 148
Msa0035650 AT3G20080.3 28.531 354 225 9 129 464 1 344 8.14e-40 148
Msa0035650 AT5G25900.1 25.322 466 312 11 27 468 31 484 8.58e-40 150
Msa0035650 AT2G45560.2 29.605 304 201 5 1 292 1 303 1.05e-39 146
Msa0035650 AT2G12190.1 26.850 473 305 15 26 468 24 485 1.18e-39 150
Msa0035650 AT1G64950.1 25.751 466 309 13 30 468 28 483 4.18e-39 149
Msa0035650 AT3G20935.1 34.468 235 125 5 259 465 74 307 7.88e-39 145
Msa0035650 AT4G20240.1 26.650 394 278 7 33 420 32 420 1.92e-38 146
Msa0035650 AT2G05180.1 24.711 433 286 11 6 415 11 426 5.73e-38 144
Msa0035650 AT3G03470.1 26.707 498 313 16 6 468 4 484 7.24e-38 145
Msa0035650 AT5G61320.1 28.706 425 254 14 66 468 66 463 1.38e-35 139
Msa0035650 AT2G45560.3 30.833 240 157 3 1 231 1 240 2.85e-34 129
Msa0035650 AT1G64900.1 26.667 420 285 9 66 468 66 479 6.19e-34 134
Msa0035650 AT2G25160.2 29.017 417 258 11 4 391 1 408 6.21e-34 133
Msa0035650 AT3G53290.1 31.773 406 237 10 84 476 8 386 5.64e-33 130
Msa0035650 AT5G35917.1 25.783 415 268 9 27 417 35 433 1.19e-31 127
Msa0035650 AT4G20240.2 25.138 362 262 5 33 390 32 388 7.04e-30 121
Msa0035650 AT5G24960.2 26.344 372 263 6 26 391 25 391 1.62e-28 117
Msa0035650 AT3G53305.1 45.695 151 71 3 343 492 183 323 4.28e-28 115
Msa0035650 AT1G16410.2 23.559 399 284 8 8 385 16 414 9.43e-28 115
Msa0035650 AT2G45510.1 23.684 494 320 16 6 465 12 482 2.37e-27 115
Msa0035650 AT3G25180.2 26.625 323 221 6 56 367 63 380 1.87e-26 111
Msa0035650 AT3G44970.1 25.581 473 313 16 29 488 30 476 4.51e-25 108
Msa0035650 AT2G44890.1 23.720 371 238 10 126 465 126 482 1.58e-24 107
Msa0035650 AT3G26125.1 24.533 375 243 10 126 465 138 507 3.90e-23 103
Msa0035650 AT5G48000.2 22.363 474 325 13 29 487 30 475 5.72e-22 99.0
Msa0035650 AT5G48000.4 22.363 474 325 13 29 487 30 475 5.72e-22 99.0
Msa0035650 AT5G48000.7 22.363 474 325 13 29 487 30 475 5.72e-22 99.0
Msa0035650 AT5G48000.6 22.363 474 325 13 29 487 30 475 5.72e-22 99.0
Msa0035650 AT5G48000.5 22.363 474 325 13 29 487 30 475 5.72e-22 99.0
Msa0035650 AT5G48000.3 22.363 474 325 13 29 487 30 475 5.72e-22 99.0
Msa0035650 AT5G48000.1 21.849 476 325 13 29 487 71 516 6.80e-22 99.4
Msa0035650 AT1G05160.2 27.517 298 185 9 179 465 189 466 1.58e-21 97.8
Msa0035650 AT1G05160.1 27.517 298 185 9 179 465 189 466 1.58e-21 97.8
Msa0035650 AT1G31800.1 32.632 190 121 5 288 473 365 551 1.62e-20 95.1
Msa0035650 AT2G44890.2 23.720 371 220 12 126 465 126 464 3.18e-20 94.0
Msa0035650 AT2G32440.2 28.378 296 180 10 159 444 169 442 4.36e-20 93.6
Msa0035650 AT2G32440.1 28.378 296 180 10 159 444 169 442 4.36e-20 93.6
Msa0035650 AT3G19270.2 23.577 492 306 16 9 482 16 455 8.24e-20 92.4
Msa0035650 AT1G13140.1 23.306 369 243 10 126 463 138 497 1.02e-19 92.4
Msa0035650 AT4G39500.2 23.989 371 254 11 123 470 131 496 1.63e-19 92.0
Msa0035650 AT4G39500.1 24.397 373 250 12 123 470 81 446 2.29e-19 91.3
Msa0035650 AT4G15110.1 29.167 240 135 7 260 468 320 555 3.58e-19 91.3
Msa0035650 AT1G13150.1 23.967 363 234 11 126 456 131 483 4.11e-19 90.9
Msa0035650 AT5G05690.3 31.980 197 124 5 269 461 132 322 6.91e-19 88.6
Msa0035650 AT5G52320.1 27.391 230 155 6 250 470 256 482 1.13e-18 89.4
Msa0035650 AT1G57750.1 28.311 219 145 6 275 487 283 495 1.29e-18 89.0
Msa0035650 AT5G52320.2 27.391 230 155 6 250 470 256 482 1.32e-18 89.0
Msa0035650 AT5G05690.1 31.980 197 124 5 269 461 251 441 1.61e-18 88.6
Msa0035650 AT5G38450.1 26.877 413 278 14 62 463 90 489 3.01e-18 87.8
Msa0035650 AT2G27690.1 28.910 211 140 5 256 460 255 461 3.56e-18 87.8
Msa0035650 AT3G50660.1 24.603 504 317 19 26 488 31 512 4.63e-18 87.4
Msa0035650 AT5G52400.1 30.660 212 140 6 251 460 283 489 5.25e-18 87.4
Msa0035650 AT1G24540.1 26.255 259 166 6 246 479 262 520 6.81e-18 87.0
Msa0035650 AT1G65340.1 27.143 210 141 5 266 466 273 479 7.72e-18 86.7
Msa0035650 AT3G19270.1 23.567 471 294 15 9 461 16 438 2.42e-17 84.7
Msa0035650 AT3G53130.1 22.525 404 287 11 58 445 101 494 2.61e-17 85.1
Msa0035650 AT1G55940.2 30.180 222 138 8 254 463 251 467 3.21e-17 84.7
Msa0035650 AT3G61035.1 25.564 266 175 7 43 299 51 302 5.36e-17 82.4
Msa0035650 AT5G35920.1 36.937 111 67 2 354 461 6 116 5.54e-17 78.6
Msa0035650 AT1G13140.2 27.700 213 139 5 266 463 259 471 5.67e-17 84.0
Msa0035650 AT1G11680.1 29.437 231 149 6 251 473 244 468 6.86e-17 83.6
Msa0035650 AT5G45340.2 23.909 481 283 18 4 459 10 432 8.08e-17 83.2
Msa0035650 AT4G32170.1 23.161 367 256 11 123 468 120 481 9.12e-17 83.2
Msa0035650 AT5G08250.2 24.590 244 165 5 246 470 279 522 9.66e-17 83.6
Msa0035650 AT3G14630.2 27.823 248 171 7 220 463 293 536 1.29e-16 83.2
Msa0035650 AT3G14630.1 27.823 248 171 7 220 463 238 481 1.53e-16 82.8
Msa0035650 AT5G08250.1 24.590 244 165 5 246 470 217 460 1.58e-16 82.4
Msa0035650 AT2G42850.1 28.070 171 113 4 297 463 293 457 1.93e-16 82.4
Msa0035650 AT4G39490.1 25.126 199 133 4 286 468 296 494 2.59e-16 82.0
Msa0035650 AT1G55940.1 30.275 218 135 8 254 459 251 463 2.63e-16 81.6
Msa0035650 AT5G02900.1 25.943 212 146 6 286 487 268 478 3.16e-16 81.6
Msa0035650 AT1G78490.1 24.211 475 311 17 7 463 8 451 3.94e-16 81.3
Msa0035650 AT4G00360.1 29.577 213 132 7 248 444 255 465 4.03e-16 81.6
Msa0035650 AT4G39510.1 26.702 191 134 5 286 470 297 487 4.99e-16 80.9
Msa0035650 AT3G14620.1 28.899 218 148 6 249 463 275 488 8.76e-16 80.5
Msa0035650 AT3G13730.1 22.934 484 274 20 24 464 41 468 9.08e-16 80.1
Msa0035650 AT5G23190.1 26.016 246 159 7 247 470 278 522 1.85e-15 79.3
Msa0035650 AT1G63710.1 28.700 223 144 6 246 456 254 473 2.46e-15 79.0
Msa0035650 AT2G21910.1 29.412 204 134 7 275 469 285 487 2.58e-15 79.0
Msa0035650 AT1G47620.1 26.160 237 157 8 250 470 263 497 4.12e-15 78.2
Msa0035650 AT1G12740.4 22.152 474 313 17 26 478 23 461 4.65e-15 77.8
Msa0035650 AT3G14610.1 25.806 217 155 5 251 463 271 485 5.32e-15 77.8
Msa0035650 AT2G26710.1 31.176 170 114 3 296 463 320 488 5.72e-15 77.8
Msa0035650 AT4G36380.1 29.808 208 128 7 268 464 289 489 7.40e-15 77.4
Msa0035650 AT1G69500.1 25.221 226 140 3 267 463 271 496 9.00e-15 77.0
Msa0035650 AT1G67110.1 34.014 147 91 5 319 463 341 483 1.35e-14 76.6
Msa0035650 AT4G39480.1 23.950 238 163 6 251 470 256 493 5.09e-14 74.7
Msa0035650 AT1G57750.2 31.250 160 98 5 275 428 283 436 7.04e-14 73.9
Msa0035650 AT1G01600.1 30.841 214 130 8 248 444 255 467 7.24e-14 74.3
Msa0035650 AT3G56630.1 28.936 235 147 11 235 459 242 466 8.76e-14 73.9
Msa0035650 AT2G26170.1 28.261 230 148 8 248 468 276 497 1.15e-13 73.6
Msa0035650 AT2G23180.1 23.590 195 136 6 286 469 301 493 1.17e-13 73.6
Msa0035650 AT5G58860.1 29.688 192 120 5 268 444 271 462 2.78e-13 72.4
Msa0035650 AT1G34540.1 29.778 225 133 10 249 459 253 466 3.57e-13 72.0
Msa0035650 AT1G13090.1 25.091 275 171 7 30 286 24 281 6.44e-13 69.7
Msa0035650 AT3G14680.1 24.885 217 156 6 251 463 272 485 6.66e-13 71.2
Msa0035650 AT2G45970.1 27.354 223 141 8 241 444 244 464 1.27e-12 70.5
Msa0035650 AT4G15300.2 21.881 489 302 20 11 466 7 448 1.30e-12 70.1
Msa0035650 AT5G24900.2 25.926 243 165 9 232 463 145 383 1.35e-12 70.1
Msa0035650 AT2G29090.3 29.474 190 116 5 289 468 188 369 1.96e-12 69.3
Msa0035650 AT4G15300.3 21.875 480 300 19 15 466 6 438 2.29e-12 69.3
Msa0035650 AT2G29090.2 28.877 187 121 4 289 468 283 464 2.42e-12 69.3
Msa0035650 AT2G29090.1 28.877 187 121 4 289 468 283 464 2.42e-12 69.3
Msa0035650 AT5G24900.1 25.926 243 165 9 232 463 262 500 2.73e-12 69.3
Msa0035650 AT3G14650.1 23.502 217 159 6 251 463 272 485 3.03e-12 69.3
Msa0035650 AT5G63450.1 20.648 494 334 16 1 459 1 471 8.84e-12 67.8
Msa0035650 AT5G63450.2 20.648 494 334 16 1 459 59 529 1.36e-11 67.4
Msa0035650 AT4G15300.1 23.902 205 145 6 268 466 261 460 1.43e-11 67.0
Msa0035650 AT5G14400.1 27.751 209 119 6 265 469 163 343 1.94e-11 66.2
Msa0035650 AT5G14400.2 27.751 209 119 6 265 469 217 397 2.10e-11 66.2
Msa0035650 AT3G14690.2 22.581 217 161 6 251 463 307 520 4.27e-11 65.9
Msa0035650 AT3G14690.1 22.581 217 161 6 251 463 272 485 4.68e-11 65.5
Msa0035650 AT4G20235.1 39.744 78 45 2 390 465 255 332 5.96e-11 64.3
Msa0035650 AT5G36110.1 22.945 292 187 11 180 462 186 448 5.98e-11 65.1
Msa0035650 AT3G50660.2 25.238 420 263 17 26 414 31 430 6.58e-11 64.7
Msa0035650 AT3G30290.1 22.951 244 175 5 254 487 159 399 9.07e-11 64.3

Find 93 sgRNAs with CRISPR-Local

Find 256 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTTCATATACTTTGTTT+AGG 0.241029 1_1:-63927622 None:intergenic
AACTTCATATACTTTGTTTA+GGG 0.249124 1_1:-63927621 None:intergenic
TTTGATTGGAAACTTGAAAA+TGG 0.250759 1_1:+63927545 Msa0035650:CDS
CACCTCTTTGGCAACATCTT+AGG 0.253021 1_1:+63926240 Msa0035650:CDS
TCCTCAATTGATTACAGATA+TGG 0.258476 1_1:+63925854 None:intergenic
ATCAGAACTTGTGCACCTTT+TGG 0.270042 1_1:-63927323 None:intergenic
TTCTCTACCAAGACTCTTGA+TGG 0.280959 1_1:+63926284 Msa0035650:CDS
CATTGATCAACTCCTTTGAT+TGG 0.288696 1_1:+63927531 Msa0035650:CDS
TTTATCACTGCATTCAAGTA+TGG 0.289738 1_1:-63927215 None:intergenic
GCAAAACTTGCTAAGTTATA+TGG 0.291749 1_1:+63926047 Msa0035650:CDS
TTCAAAAGTGTTCTATGCTT+TGG 0.301447 1_1:+63926595 Msa0035650:CDS
TGTTGCCAAAGAGGTGAAAA+TGG 0.310336 1_1:-63926233 None:intergenic
TATACTTTGTTTAGGGCAAC+TGG 0.345426 1_1:-63927614 None:intergenic
CATAACTTAATACGCATAAT+AGG 0.354037 1_1:-63926071 None:intergenic
ATGTGACATGATGGTGAAAA+AGG 0.355163 1_1:-63925988 None:intergenic
CTGGCTCACCACTTGCTGTT+AGG 0.356556 1_1:+63927486 Msa0035650:CDS
CAGCTCCAATGTTGCTTCCT+AGG 0.358629 1_1:+63927261 Msa0035650:CDS
TTGTCCAAGTTCATGTCCTT+TGG 0.377792 1_1:-63927575 None:intergenic
TGCATTGTCACATTCTTCAT+TGG 0.379643 1_1:+63925912 Msa0035650:CDS
TGTAACACCTTCTACCTTAA+GGG 0.391306 1_1:+63927666 Msa0035650:three_prime_UTR
GTGTAACACCTTCTACCTTA+AGG 0.398026 1_1:+63927665 Msa0035650:three_prime_UTR
TTGAGGAATCAGATATTGAT+AGG 0.399841 1_1:+63927189 Msa0035650:CDS
AGGATGTTGCATTTGATGTT+GGG 0.400110 1_1:+63927506 Msa0035650:CDS
AAAGATAAATGCACCCCTTA+AGG 0.402957 1_1:-63927680 None:intergenic
TGTTGGAAGAGCTGCTTTCA+AGG 0.404869 1_1:+63926388 Msa0035650:CDS
CTGATCAATGAATGGGCTAT+TGG 0.419393 1_1:+63927341 Msa0035650:CDS
ATGCATAAAAGCAGCTTAAC+CGG 0.422718 1_1:+63926353 Msa0035650:CDS
CTGTATGGGGATGTAAAATA+TGG 0.424986 1_1:+63927779 Msa0035650:three_prime_UTR
TGTGTCTTCTAATGCCTTGT+GGG 0.426560 1_1:-63926559 None:intergenic
TTGTGAGTAGTTGTGTTATC+AGG 0.430485 1_1:-63926182 None:intergenic
CTAGAGGAAACCATTGGATT+AGG 0.441923 1_1:+63927158 Msa0035650:CDS
ACATCTACCCTTGCTTTCCT+AGG 0.450885 1_1:-63927278 None:intergenic
TAGGATGTTGCATTTGATGT+TGG 0.451329 1_1:+63927505 Msa0035650:CDS
AATGCACCCCTTAAGGTAGA+AGG 0.452221 1_1:-63927673 None:intergenic
CACAAGTTCTGATCAATGAA+TGG 0.452681 1_1:+63927333 Msa0035650:CDS
ATGTGATGATGAGATGATTA+TGG 0.455610 1_1:-63926105 None:intergenic
ATTTAGTTTGTTGTTTGAGT+CGG 0.455901 1_1:+63927727 Msa0035650:three_prime_UTR
AGGGCAACTGGAATAGCTCT+TGG 0.457393 1_1:-63927602 None:intergenic
AATCATCTCATCATCACATA+TGG 0.458125 1_1:+63926109 Msa0035650:CDS
TGGATTAGGCAAAGCAATTG+AGG 0.468612 1_1:+63927172 Msa0035650:CDS
CTAGGAAGCAACATTGGAGC+TGG 0.474492 1_1:-63927260 None:intergenic
TGACATGCTAGACACCTTGT+TGG 0.476499 1_1:+63926676 Msa0035650:CDS
TTCCTAAGATGTTGCCAAAG+AGG 0.478700 1_1:-63926242 None:intergenic
CTATTGGTAGAACAGACATA+TGG 0.484112 1_1:+63927357 Msa0035650:CDS
GGAACGGAGACATCGGCATA+TGG 0.485919 1_1:+63927071 Msa0035650:CDS
CAAGGAAGATAACCAAAAGA+TGG 0.490354 1_1:+63926706 Msa0035650:CDS
TCCAACATCGACAGCTTCAC+CGG 0.497329 1_1:-63926372 None:intergenic
AAGCTTACACCGTTCGGTAG+TGG 0.505174 1_1:+63927449 Msa0035650:CDS
AATTGCTTTGCCTAATCCAA+TGG 0.507078 1_1:-63927168 None:intergenic
TAATAGGATCTTCTTGTGGC+GGG 0.510423 1_1:+63927050 Msa0035650:intron
TTGACTTCCATCAAGAGTCT+TGG 0.512046 1_1:-63926291 None:intergenic
GGGAAATGATCAGCAATGTT+TGG 0.514705 1_1:-63926518 None:intergenic
ACCGGTGAAGCTGTCGATGT+TGG 0.515085 1_1:+63926371 Msa0035650:CDS
TTGGAAACTTGAAAATGGTA+TGG 0.515253 1_1:+63927550 Msa0035650:CDS
GGTTCTGAAATTGATGTCAA+AGG 0.515973 1_1:+63927416 Msa0035650:CDS
CTAACAGCAAGTGGTGAGCC+AGG 0.519026 1_1:-63927485 None:intergenic
ATACAGAGGCTTGAAAACTC+TGG 0.519429 1_1:-63927762 None:intergenic
GGATCTTCTTGTGGCGGGAA+CGG 0.521625 1_1:+63927055 Msa0035650:intron
GGAACCAAAGGACATGAACT+TGG 0.523493 1_1:+63927571 Msa0035650:CDS
CATCGGCATATGGATTAGAA+AGG 0.524755 1_1:+63927081 Msa0035650:CDS
TCAACTCTATTAAGTGCTGT+TGG 0.527182 1_1:+63926491 Msa0035650:CDS
TACAGAGGCTTGAAAACTCT+GGG 0.530099 1_1:-63927761 None:intergenic
GCTTTCCTAGGAAGCAACAT+TGG 0.531700 1_1:-63927266 None:intergenic
GTGTGTCTTCTAATGCCTTG+TGG 0.537078 1_1:-63926560 None:intergenic
ACAAGTTCTGATCAATGAAT+GGG 0.537372 1_1:+63927334 Msa0035650:CDS
CACCTTGTTGGACATTTCCA+AGG 0.540528 1_1:+63926688 Msa0035650:CDS
GCAGGTTACACAATTCCAAA+AGG 0.542022 1_1:+63927308 Msa0035650:CDS
TATTGGTAGAACAGACATAT+GGG 0.545658 1_1:+63927358 Msa0035650:CDS
GTTGCCAAAGAGGTGAAAAT+GGG 0.550649 1_1:-63926232 None:intergenic
ATCGGCATATGGATTAGAAA+GGG 0.554187 1_1:+63927082 Msa0035650:CDS
AGGGTAGATGTGGAAATAGC+AGG 0.559602 1_1:+63927290 Msa0035650:CDS
AGTGGAAGACGTATATGTCC+TGG 0.560991 1_1:+63927467 Msa0035650:CDS
AAAGAACTAGAGGAAACCAT+TGG 0.567096 1_1:+63927152 Msa0035650:CDS
TGTTGCTTCCTAGGAAAGCA+AGG 0.573347 1_1:+63927270 Msa0035650:CDS
TAGGAAAGCAAGGGTAGATG+TGG 0.580642 1_1:+63927280 Msa0035650:CDS
TGCAACATCCTAACAGCAAG+TGG 0.583831 1_1:-63927494 None:intergenic
TTCAACAACATGTGACATGA+TGG 0.588619 1_1:-63925997 None:intergenic
GGAAGCAACATTGGAGCTGG+AGG 0.596596 1_1:-63927257 None:intergenic
TGAAAATGGTATGGAACCAA+AGG 0.598027 1_1:+63927559 Msa0035650:CDS
AAAAGCAAAGAAAGAACTAG+AGG 0.598344 1_1:+63927142 Msa0035650:CDS
GTAACACCTTCTACCTTAAG+GGG 0.605371 1_1:+63927667 Msa0035650:three_prime_UTR
TTAATAGGATCTTCTTGTGG+CGG 0.607124 1_1:+63927049 Msa0035650:intron
TCAAACTACAAGCTTCCACC+AGG 0.616341 1_1:+63925960 Msa0035650:CDS
TGTGGCGGGAACGGAGACAT+CGG 0.617350 1_1:+63927064 Msa0035650:CDS
GAAGCAACATTGGAGCTGGA+GGG 0.632234 1_1:-63927256 None:intergenic
GCCAAAGAGGTGAAAATGGG+AGG 0.644896 1_1:-63926229 None:intergenic
TTCCTTGGAAATGTCCAACA+AGG 0.646999 1_1:-63926690 None:intergenic
ATGGGGATGTAAAATATGGT+TGG 0.649623 1_1:+63927783 Msa0035650:three_prime_UTR
GTTGCTTCCTAGGAAAGCAA+GGG 0.673834 1_1:+63927271 Msa0035650:CDS
TGAAGTAGTACGCCATCCAG+AGG 0.681999 1_1:+63927112 Msa0035650:CDS
ATACGTCTTCCACTACCGAA+CGG 0.707532 1_1:-63927458 None:intergenic
AGAGGCTTGAAAACTCTGGG+AGG 0.734212 1_1:-63927758 None:intergenic
GTTACACAGATTATTCAACG+AGG 0.805813 1_1:-63927649 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAGATGAATAATTTTATA+TGG + chr1_1:63926880-63926899 Msa0035650:intron 15.0%
!!! ACAAGATGAATAATTTTATA+TGG + chr1_1:63926880-63926899 Msa0035650:intron 15.0%
!! ATTAGTAAAAAGAATCTCTT+TGG - chr1_1:63926135-63926154 None:intergenic 20.0%
!! TTTATATGGACACATATATT+TGG + chr1_1:63926894-63926913 Msa0035650:intron 20.0%
!!! GTCATTGTTGTATTTTTAAT+AGG + chr1_1:63927034-63927053 Msa0035650:intron 20.0%
!!! AACTTCATATACTTTGTTTA+GGG - chr1_1:63927624-63927643 None:intergenic 20.0%
!!! TAACTTCATATACTTTGTTT+AGG - chr1_1:63927625-63927644 None:intergenic 20.0%
!! ATTAGTAAAAAGAATCTCTT+TGG - chr1_1:63926135-63926154 None:intergenic 20.0%
!! TTTATATGGACACATATATT+TGG + chr1_1:63926894-63926913 Msa0035650:intron 20.0%
!!! GTCATTGTTGTATTTTTAAT+AGG + chr1_1:63927034-63927053 Msa0035650:intron 20.0%
!!! AACTTCATATACTTTGTTTA+GGG - chr1_1:63927624-63927643 None:intergenic 20.0%
!!! TAACTTCATATACTTTGTTT+AGG - chr1_1:63927625-63927644 None:intergenic 20.0%
! CATAACTTAATACGCATAAT+AGG - chr1_1:63926074-63926093 None:intergenic 25.0%
! AATTGTGATATGTTTCGTTA+GGG - chr1_1:63926812-63926831 None:intergenic 25.0%
! AAATTGTGATATGTTTCGTT+AGG - chr1_1:63926813-63926832 None:intergenic 25.0%
! TGTATCATTGCACAAATATA+AGG - chr1_1:63926861-63926880 None:intergenic 25.0%
!! TTTTTAATAGGATCTTCTTG+TGG + chr1_1:63927046-63927065 Msa0035650:intron 25.0%
!! TTTTCACCAGAAAGATTTTT+GGG + chr1_1:63927395-63927414 Msa0035650:CDS 25.0%
!!! ATTTTCAAGTTTCCAATCAA+AGG - chr1_1:63927546-63927565 None:intergenic 25.0%
! TTTGATTGGAAACTTGAAAA+TGG + chr1_1:63927545-63927564 Msa0035650:CDS 25.0%
!!! ATTTAGTTTGTTGTTTGAGT+CGG + chr1_1:63927727-63927746 Msa0035650:three_prime_UTR 25.0%
! CATAACTTAATACGCATAAT+AGG - chr1_1:63926074-63926093 None:intergenic 25.0%
! AATTGTGATATGTTTCGTTA+GGG - chr1_1:63926812-63926831 None:intergenic 25.0%
! AAATTGTGATATGTTTCGTT+AGG - chr1_1:63926813-63926832 None:intergenic 25.0%
! TGTATCATTGCACAAATATA+AGG - chr1_1:63926861-63926880 None:intergenic 25.0%
!! TTTTTAATAGGATCTTCTTG+TGG + chr1_1:63927046-63927065 Msa0035650:intron 25.0%
!! TTTTCACCAGAAAGATTTTT+GGG + chr1_1:63927395-63927414 Msa0035650:CDS 25.0%
!!! ATTTTCAAGTTTCCAATCAA+AGG - chr1_1:63927546-63927565 None:intergenic 25.0%
! TTTGATTGGAAACTTGAAAA+TGG + chr1_1:63927545-63927564 Msa0035650:CDS 25.0%
!!! ATTTAGTTTGTTGTTTGAGT+CGG + chr1_1:63927727-63927746 Msa0035650:three_prime_UTR 25.0%
!! GCAAAACTTGCTAAGTTATA+TGG + chr1_1:63926047-63926066 Msa0035650:CDS 30.0%
! ATGTGATGATGAGATGATTA+TGG - chr1_1:63926108-63926127 None:intergenic 30.0%
AATCATCTCATCATCACATA+TGG + chr1_1:63926109-63926128 Msa0035650:CDS 30.0%
!! TTCAAAAGTGTTCTATGCTT+TGG + chr1_1:63926595-63926614 Msa0035650:CDS 30.0%
! TTTGTCTCATTTTCATTCGT+TGG - chr1_1:63926634-63926653 None:intergenic 30.0%
! TCTGTCTTTTATCCATCTTT+TGG - chr1_1:63926721-63926740 None:intergenic 30.0%
! ATATATTTGGACACGTCTTT+TGG + chr1_1:63926907-63926926 Msa0035650:intron 30.0%
GTGTGGACACATTATATATT+TGG - chr1_1:63926981-63927000 None:intergenic 30.0%
AAAAGCAAAGAAAGAACTAG+AGG + chr1_1:63927142-63927161 Msa0035650:CDS 30.0%
TTGAGGAATCAGATATTGAT+AGG + chr1_1:63927189-63927208 Msa0035650:CDS 30.0%
TTTATCACTGCATTCAAGTA+TGG - chr1_1:63927218-63927237 None:intergenic 30.0%
! ACAAGTTCTGATCAATGAAT+GGG + chr1_1:63927334-63927353 Msa0035650:CDS 30.0%
TATTGGTAGAACAGACATAT+GGG + chr1_1:63927358-63927377 Msa0035650:CDS 30.0%
! GTTTTCACCAGAAAGATTTT+TGG + chr1_1:63927394-63927413 Msa0035650:CDS 30.0%
TTGGAAACTTGAAAATGGTA+TGG + chr1_1:63927550-63927569 Msa0035650:CDS 30.0%
!! GCAAAACTTGCTAAGTTATA+TGG + chr1_1:63926047-63926066 Msa0035650:CDS 30.0%
! ATGTGATGATGAGATGATTA+TGG - chr1_1:63926108-63926127 None:intergenic 30.0%
AATCATCTCATCATCACATA+TGG + chr1_1:63926109-63926128 Msa0035650:CDS 30.0%
!! TTCAAAAGTGTTCTATGCTT+TGG + chr1_1:63926595-63926614 Msa0035650:CDS 30.0%
! TTTGTCTCATTTTCATTCGT+TGG - chr1_1:63926634-63926653 None:intergenic 30.0%
! TCTGTCTTTTATCCATCTTT+TGG - chr1_1:63926721-63926740 None:intergenic 30.0%
! ATATATTTGGACACGTCTTT+TGG + chr1_1:63926907-63926926 Msa0035650:intron 30.0%
GTGTGGACACATTATATATT+TGG - chr1_1:63926981-63927000 None:intergenic 30.0%
AAAAGCAAAGAAAGAACTAG+AGG + chr1_1:63927142-63927161 Msa0035650:CDS 30.0%
TTGAGGAATCAGATATTGAT+AGG + chr1_1:63927189-63927208 Msa0035650:CDS 30.0%
TTTATCACTGCATTCAAGTA+TGG - chr1_1:63927218-63927237 None:intergenic 30.0%
! ACAAGTTCTGATCAATGAAT+GGG + chr1_1:63927334-63927353 Msa0035650:CDS 30.0%
TATTGGTAGAACAGACATAT+GGG + chr1_1:63927358-63927377 Msa0035650:CDS 30.0%
! GTTTTCACCAGAAAGATTTT+TGG + chr1_1:63927394-63927413 Msa0035650:CDS 30.0%
TTGGAAACTTGAAAATGGTA+TGG + chr1_1:63927550-63927569 Msa0035650:CDS 30.0%
TGCATTGTCACATTCTTCAT+TGG + chr1_1:63925912-63925931 Msa0035650:CDS 35.0%
! ATGTGACATGATGGTGAAAA+AGG - chr1_1:63925991-63926010 None:intergenic 35.0%
TTCAACAACATGTGACATGA+TGG - chr1_1:63926000-63926019 None:intergenic 35.0%
!! AGTTTTGCAAGTGTTTGTTG+TGG - chr1_1:63926035-63926054 None:intergenic 35.0%
TTGTGAGTAGTTGTGTTATC+AGG - chr1_1:63926185-63926204 None:intergenic 35.0%
ATGCATAAAAGCAGCTTAAC+CGG + chr1_1:63926353-63926372 Msa0035650:CDS 35.0%
! TCAACTCTATTAAGTGCTGT+TGG + chr1_1:63926491-63926510 Msa0035650:CDS 35.0%
GGTCAAAAATCTTCAACACT+GGG - chr1_1:63926541-63926560 None:intergenic 35.0%
! TTGAAGATTTTTGACCCACA+AGG + chr1_1:63926545-63926564 Msa0035650:CDS 35.0%
!! CATCTTTTGGTTATCTTCCT+TGG - chr1_1:63926708-63926727 None:intergenic 35.0%
CAAGGAAGATAACCAAAAGA+TGG + chr1_1:63926706-63926725 Msa0035650:CDS 35.0%
TTAATAGGATCTTCTTGTGG+CGG + chr1_1:63927049-63927068 Msa0035650:intron 35.0%
!! ATCGGCATATGGATTAGAAA+GGG + chr1_1:63927082-63927101 Msa0035650:CDS 35.0%
!! TTTGCTTTTGACATAACCTC+TGG - chr1_1:63927131-63927150 None:intergenic 35.0%
AAAGAACTAGAGGAAACCAT+TGG + chr1_1:63927152-63927171 Msa0035650:CDS 35.0%
AATTGCTTTGCCTAATCCAA+TGG - chr1_1:63927171-63927190 None:intergenic 35.0%
! CACAAGTTCTGATCAATGAA+TGG + chr1_1:63927333-63927352 Msa0035650:CDS 35.0%
CTATTGGTAGAACAGACATA+TGG + chr1_1:63927357-63927376 Msa0035650:CDS 35.0%
TCAGAACCCAAAAATCTTTC+TGG - chr1_1:63927404-63927423 None:intergenic 35.0%
!! GGTTCTGAAATTGATGTCAA+AGG + chr1_1:63927416-63927435 Msa0035650:CDS 35.0%
! CATTTTAAGCTTACACCGTT+CGG + chr1_1:63927443-63927462 Msa0035650:CDS 35.0%
TAGGATGTTGCATTTGATGT+TGG + chr1_1:63927505-63927524 Msa0035650:CDS 35.0%
AGGATGTTGCATTTGATGTT+GGG + chr1_1:63927506-63927525 Msa0035650:CDS 35.0%
CATTGATCAACTCCTTTGAT+TGG + chr1_1:63927531-63927550 Msa0035650:CDS 35.0%
TGAAAATGGTATGGAACCAA+AGG + chr1_1:63927559-63927578 Msa0035650:CDS 35.0%
! TATACTTTGTTTAGGGCAAC+TGG - chr1_1:63927617-63927636 None:intergenic 35.0%
GTTACACAGATTATTCAACG+AGG - chr1_1:63927652-63927671 None:intergenic 35.0%
TGTAACACCTTCTACCTTAA+GGG + chr1_1:63927666-63927685 Msa0035650:three_prime_UTR 35.0%
AAAGATAAATGCACCCCTTA+AGG - chr1_1:63927683-63927702 None:intergenic 35.0%
! TATTTTACATCCCCATACAG+AGG - chr1_1:63927779-63927798 None:intergenic 35.0%
CTGTATGGGGATGTAAAATA+TGG + chr1_1:63927779-63927798 Msa0035650:three_prime_UTR 35.0%
ATGGGGATGTAAAATATGGT+TGG + chr1_1:63927783-63927802 Msa0035650:three_prime_UTR 35.0%
TGCATTGTCACATTCTTCAT+TGG + chr1_1:63925912-63925931 Msa0035650:CDS 35.0%
! ATGTGACATGATGGTGAAAA+AGG - chr1_1:63925991-63926010 None:intergenic 35.0%
TTCAACAACATGTGACATGA+TGG - chr1_1:63926000-63926019 None:intergenic 35.0%
!! AGTTTTGCAAGTGTTTGTTG+TGG - chr1_1:63926035-63926054 None:intergenic 35.0%
TTGTGAGTAGTTGTGTTATC+AGG - chr1_1:63926185-63926204 None:intergenic 35.0%
ATGCATAAAAGCAGCTTAAC+CGG + chr1_1:63926353-63926372 Msa0035650:CDS 35.0%
! TCAACTCTATTAAGTGCTGT+TGG + chr1_1:63926491-63926510 Msa0035650:CDS 35.0%
GGTCAAAAATCTTCAACACT+GGG - chr1_1:63926541-63926560 None:intergenic 35.0%
! TTGAAGATTTTTGACCCACA+AGG + chr1_1:63926545-63926564 Msa0035650:CDS 35.0%
!! CATCTTTTGGTTATCTTCCT+TGG - chr1_1:63926708-63926727 None:intergenic 35.0%
CAAGGAAGATAACCAAAAGA+TGG + chr1_1:63926706-63926725 Msa0035650:CDS 35.0%
TTAATAGGATCTTCTTGTGG+CGG + chr1_1:63927049-63927068 Msa0035650:intron 35.0%
!! ATCGGCATATGGATTAGAAA+GGG + chr1_1:63927082-63927101 Msa0035650:CDS 35.0%
!! TTTGCTTTTGACATAACCTC+TGG - chr1_1:63927131-63927150 None:intergenic 35.0%
AAAGAACTAGAGGAAACCAT+TGG + chr1_1:63927152-63927171 Msa0035650:CDS 35.0%
AATTGCTTTGCCTAATCCAA+TGG - chr1_1:63927171-63927190 None:intergenic 35.0%
! CACAAGTTCTGATCAATGAA+TGG + chr1_1:63927333-63927352 Msa0035650:CDS 35.0%
CTATTGGTAGAACAGACATA+TGG + chr1_1:63927357-63927376 Msa0035650:CDS 35.0%
TCAGAACCCAAAAATCTTTC+TGG - chr1_1:63927404-63927423 None:intergenic 35.0%
!! GGTTCTGAAATTGATGTCAA+AGG + chr1_1:63927416-63927435 Msa0035650:CDS 35.0%
! CATTTTAAGCTTACACCGTT+CGG + chr1_1:63927443-63927462 Msa0035650:CDS 35.0%
TAGGATGTTGCATTTGATGT+TGG + chr1_1:63927505-63927524 Msa0035650:CDS 35.0%
AGGATGTTGCATTTGATGTT+GGG + chr1_1:63927506-63927525 Msa0035650:CDS 35.0%
CATTGATCAACTCCTTTGAT+TGG + chr1_1:63927531-63927550 Msa0035650:CDS 35.0%
TGAAAATGGTATGGAACCAA+AGG + chr1_1:63927559-63927578 Msa0035650:CDS 35.0%
! TATACTTTGTTTAGGGCAAC+TGG - chr1_1:63927617-63927636 None:intergenic 35.0%
GTTACACAGATTATTCAACG+AGG - chr1_1:63927652-63927671 None:intergenic 35.0%
TGTAACACCTTCTACCTTAA+GGG + chr1_1:63927666-63927685 Msa0035650:three_prime_UTR 35.0%
AAAGATAAATGCACCCCTTA+AGG - chr1_1:63927683-63927702 None:intergenic 35.0%
! TATTTTACATCCCCATACAG+AGG - chr1_1:63927779-63927798 None:intergenic 35.0%
CTGTATGGGGATGTAAAATA+TGG + chr1_1:63927779-63927798 Msa0035650:three_prime_UTR 35.0%
ATGGGGATGTAAAATATGGT+TGG + chr1_1:63927783-63927802 Msa0035650:three_prime_UTR 35.0%
! GACTAGTGCTATGCTCTTTT+TGG + chr1_1:63925884-63925903 Msa0035650:CDS 40.0%
! GACATGATGGTGAAAAAGGA+TGG - chr1_1:63925987-63926006 None:intergenic 40.0%
GTTGCCAAAGAGGTGAAAAT+GGG - chr1_1:63926235-63926254 None:intergenic 40.0%
TGTTGCCAAAGAGGTGAAAA+TGG - chr1_1:63926236-63926255 None:intergenic 40.0%
TTCCTAAGATGTTGCCAAAG+AGG - chr1_1:63926245-63926264 None:intergenic 40.0%
TTCTCTACCAAGACTCTTGA+TGG + chr1_1:63926284-63926303 Msa0035650:CDS 40.0%
TTGACTTCCATCAAGAGTCT+TGG - chr1_1:63926294-63926313 None:intergenic 40.0%
GGGAAATGATCAGCAATGTT+TGG - chr1_1:63926521-63926540 None:intergenic 40.0%
GGGTCAAAAATCTTCAACAC+TGG - chr1_1:63926542-63926561 None:intergenic 40.0%
TGTGTCTTCTAATGCCTTGT+GGG - chr1_1:63926562-63926581 None:intergenic 40.0%
!!! GGTGTCTAGCATGTCATTTT+TGG - chr1_1:63926672-63926691 None:intergenic 40.0%
TTCCTTGGAAATGTCCAACA+AGG - chr1_1:63926693-63926712 None:intergenic 40.0%
TCATGCGAGCAATTATTGTG+TGG - chr1_1:63926998-63927017 None:intergenic 40.0%
TAATAGGATCTTCTTGTGGC+GGG + chr1_1:63927050-63927069 Msa0035650:intron 40.0%
!! CATCGGCATATGGATTAGAA+AGG + chr1_1:63927081-63927100 Msa0035650:CDS 40.0%
! CTTTTGACATAACCTCTGGA+TGG - chr1_1:63927127-63927146 None:intergenic 40.0%
CTAGAGGAAACCATTGGATT+AGG + chr1_1:63927158-63927177 Msa0035650:CDS 40.0%
! TGGATTAGGCAAAGCAATTG+AGG + chr1_1:63927172-63927191 Msa0035650:CDS 40.0%
GCAGGTTACACAATTCCAAA+AGG + chr1_1:63927308-63927327 Msa0035650:CDS 40.0%
! ATCAGAACTTGTGCACCTTT+TGG - chr1_1:63927326-63927345 None:intergenic 40.0%
!! CTGATCAATGAATGGGCTAT+TGG + chr1_1:63927341-63927360 Msa0035650:CDS 40.0%
TTGTCCAAGTTCATGTCCTT+TGG - chr1_1:63927578-63927597 None:intergenic 40.0%
GTGTAACACCTTCTACCTTA+AGG + chr1_1:63927665-63927684 Msa0035650:three_prime_UTR 40.0%
GTAACACCTTCTACCTTAAG+GGG + chr1_1:63927667-63927686 Msa0035650:three_prime_UTR 40.0%
TACAGAGGCTTGAAAACTCT+GGG - chr1_1:63927764-63927783 None:intergenic 40.0%
ATACAGAGGCTTGAAAACTC+TGG - chr1_1:63927765-63927784 None:intergenic 40.0%
!! AGAGTTTTCAAGCCTCTGTA+TGG + chr1_1:63927764-63927783 Msa0035650:three_prime_UTR 40.0%
!! GAGTTTTCAAGCCTCTGTAT+GGG + chr1_1:63927765-63927784 Msa0035650:three_prime_UTR 40.0%
!! AGTTTTCAAGCCTCTGTATG+GGG + chr1_1:63927766-63927785 Msa0035650:three_prime_UTR 40.0%
! GACTAGTGCTATGCTCTTTT+TGG + chr1_1:63925884-63925903 Msa0035650:CDS 40.0%
! GACATGATGGTGAAAAAGGA+TGG - chr1_1:63925987-63926006 None:intergenic 40.0%
GTTGCCAAAGAGGTGAAAAT+GGG - chr1_1:63926235-63926254 None:intergenic 40.0%
TGTTGCCAAAGAGGTGAAAA+TGG - chr1_1:63926236-63926255 None:intergenic 40.0%
TTCCTAAGATGTTGCCAAAG+AGG - chr1_1:63926245-63926264 None:intergenic 40.0%
TTCTCTACCAAGACTCTTGA+TGG + chr1_1:63926284-63926303 Msa0035650:CDS 40.0%
TTGACTTCCATCAAGAGTCT+TGG - chr1_1:63926294-63926313 None:intergenic 40.0%
GGGAAATGATCAGCAATGTT+TGG - chr1_1:63926521-63926540 None:intergenic 40.0%
GGGTCAAAAATCTTCAACAC+TGG - chr1_1:63926542-63926561 None:intergenic 40.0%
TGTGTCTTCTAATGCCTTGT+GGG - chr1_1:63926562-63926581 None:intergenic 40.0%
!!! GGTGTCTAGCATGTCATTTT+TGG - chr1_1:63926672-63926691 None:intergenic 40.0%
TTCCTTGGAAATGTCCAACA+AGG - chr1_1:63926693-63926712 None:intergenic 40.0%
TCATGCGAGCAATTATTGTG+TGG - chr1_1:63926998-63927017 None:intergenic 40.0%
TAATAGGATCTTCTTGTGGC+GGG + chr1_1:63927050-63927069 Msa0035650:intron 40.0%
!! CATCGGCATATGGATTAGAA+AGG + chr1_1:63927081-63927100 Msa0035650:CDS 40.0%
! CTTTTGACATAACCTCTGGA+TGG - chr1_1:63927127-63927146 None:intergenic 40.0%
CTAGAGGAAACCATTGGATT+AGG + chr1_1:63927158-63927177 Msa0035650:CDS 40.0%
! TGGATTAGGCAAAGCAATTG+AGG + chr1_1:63927172-63927191 Msa0035650:CDS 40.0%
GCAGGTTACACAATTCCAAA+AGG + chr1_1:63927308-63927327 Msa0035650:CDS 40.0%
! ATCAGAACTTGTGCACCTTT+TGG - chr1_1:63927326-63927345 None:intergenic 40.0%
!! CTGATCAATGAATGGGCTAT+TGG + chr1_1:63927341-63927360 Msa0035650:CDS 40.0%
TTGTCCAAGTTCATGTCCTT+TGG - chr1_1:63927578-63927597 None:intergenic 40.0%
GTGTAACACCTTCTACCTTA+AGG + chr1_1:63927665-63927684 Msa0035650:three_prime_UTR 40.0%
GTAACACCTTCTACCTTAAG+GGG + chr1_1:63927667-63927686 Msa0035650:three_prime_UTR 40.0%
TACAGAGGCTTGAAAACTCT+GGG - chr1_1:63927764-63927783 None:intergenic 40.0%
ATACAGAGGCTTGAAAACTC+TGG - chr1_1:63927765-63927784 None:intergenic 40.0%
!! AGAGTTTTCAAGCCTCTGTA+TGG + chr1_1:63927764-63927783 Msa0035650:three_prime_UTR 40.0%
!! GAGTTTTCAAGCCTCTGTAT+GGG + chr1_1:63927765-63927784 Msa0035650:three_prime_UTR 40.0%
!! AGTTTTCAAGCCTCTGTATG+GGG + chr1_1:63927766-63927785 Msa0035650:three_prime_UTR 40.0%
TCAAACTACAAGCTTCCACC+AGG + chr1_1:63925960-63925979 Msa0035650:CDS 45.0%
ATGGTGAAAAAGGATGGTCC+TGG - chr1_1:63925981-63926000 None:intergenic 45.0%
! TCCTCCCATTTTCACCTCTT+TGG + chr1_1:63926228-63926247 Msa0035650:CDS 45.0%
CACCTCTTTGGCAACATCTT+AGG + chr1_1:63926240-63926259 Msa0035650:CDS 45.0%
! TGTTGGAAGAGCTGCTTTCA+AGG + chr1_1:63926388-63926407 Msa0035650:CDS 45.0%
GTGTGTCTTCTAATGCCTTG+TGG - chr1_1:63926563-63926582 None:intergenic 45.0%
TGACATGCTAGACACCTTGT+TGG + chr1_1:63926676-63926695 Msa0035650:CDS 45.0%
CACCTTGTTGGACATTTCCA+AGG + chr1_1:63926688-63926707 Msa0035650:CDS 45.0%
GCTTTCCTAGGAAGCAACAT+TGG - chr1_1:63927269-63927288 None:intergenic 45.0%
! TGTTGCTTCCTAGGAAAGCA+AGG + chr1_1:63927270-63927289 Msa0035650:CDS 45.0%
GTTGCTTCCTAGGAAAGCAA+GGG + chr1_1:63927271-63927290 Msa0035650:CDS 45.0%
ACATCTACCCTTGCTTTCCT+AGG - chr1_1:63927281-63927300 None:intergenic 45.0%
TAGGAAAGCAAGGGTAGATG+TGG + chr1_1:63927280-63927299 Msa0035650:CDS 45.0%
AGGGTAGATGTGGAAATAGC+AGG + chr1_1:63927290-63927309 Msa0035650:CDS 45.0%
ATACGTCTTCCACTACCGAA+CGG - chr1_1:63927461-63927480 None:intergenic 45.0%
AGTGGAAGACGTATATGTCC+TGG + chr1_1:63927467-63927486 Msa0035650:CDS 45.0%
TGCAACATCCTAACAGCAAG+TGG - chr1_1:63927497-63927516 None:intergenic 45.0%
GGAACCAAAGGACATGAACT+TGG + chr1_1:63927571-63927590 Msa0035650:CDS 45.0%
AATGCACCCCTTAAGGTAGA+AGG - chr1_1:63927676-63927695 None:intergenic 45.0%
TCAAACTACAAGCTTCCACC+AGG + chr1_1:63925960-63925979 Msa0035650:CDS 45.0%
ATGGTGAAAAAGGATGGTCC+TGG - chr1_1:63925981-63926000 None:intergenic 45.0%
! TCCTCCCATTTTCACCTCTT+TGG + chr1_1:63926228-63926247 Msa0035650:CDS 45.0%
CACCTCTTTGGCAACATCTT+AGG + chr1_1:63926240-63926259 Msa0035650:CDS 45.0%
! TGTTGGAAGAGCTGCTTTCA+AGG + chr1_1:63926388-63926407 Msa0035650:CDS 45.0%
GTGTGTCTTCTAATGCCTTG+TGG - chr1_1:63926563-63926582 None:intergenic 45.0%
TGACATGCTAGACACCTTGT+TGG + chr1_1:63926676-63926695 Msa0035650:CDS 45.0%
CACCTTGTTGGACATTTCCA+AGG + chr1_1:63926688-63926707 Msa0035650:CDS 45.0%
GCTTTCCTAGGAAGCAACAT+TGG - chr1_1:63927269-63927288 None:intergenic 45.0%
! TGTTGCTTCCTAGGAAAGCA+AGG + chr1_1:63927270-63927289 Msa0035650:CDS 45.0%
GTTGCTTCCTAGGAAAGCAA+GGG + chr1_1:63927271-63927290 Msa0035650:CDS 45.0%
ACATCTACCCTTGCTTTCCT+AGG - chr1_1:63927281-63927300 None:intergenic 45.0%
TAGGAAAGCAAGGGTAGATG+TGG + chr1_1:63927280-63927299 Msa0035650:CDS 45.0%
AGGGTAGATGTGGAAATAGC+AGG + chr1_1:63927290-63927309 Msa0035650:CDS 45.0%
ATACGTCTTCCACTACCGAA+CGG - chr1_1:63927461-63927480 None:intergenic 45.0%
AGTGGAAGACGTATATGTCC+TGG + chr1_1:63927467-63927486 Msa0035650:CDS 45.0%
TGCAACATCCTAACAGCAAG+TGG - chr1_1:63927497-63927516 None:intergenic 45.0%
GGAACCAAAGGACATGAACT+TGG + chr1_1:63927571-63927590 Msa0035650:CDS 45.0%
AATGCACCCCTTAAGGTAGA+AGG - chr1_1:63927676-63927695 None:intergenic 45.0%
!! TTCTTAAATTATTATATATT+TGG - chr1_1:63926934-63926953 None:intergenic 5.0%
!! TTCTTAAATTATTATATATT+TGG - chr1_1:63926934-63926953 None:intergenic 5.0%
GTGAAAAAGGATGGTCCTGG+TGG - chr1_1:63925978-63925997 None:intergenic 50.0%
GCCAAAGAGGTGAAAATGGG+AGG - chr1_1:63926232-63926251 None:intergenic 50.0%
TCCAACATCGACAGCTTCAC+CGG - chr1_1:63926375-63926394 None:intergenic 50.0%
TGAAGTAGTACGCCATCCAG+AGG + chr1_1:63927112-63927131 Msa0035650:CDS 50.0%
GAAGCAACATTGGAGCTGGA+GGG - chr1_1:63927259-63927278 None:intergenic 50.0%
CTAGGAAGCAACATTGGAGC+TGG - chr1_1:63927263-63927282 None:intergenic 50.0%
! CAGCTCCAATGTTGCTTCCT+AGG + chr1_1:63927261-63927280 Msa0035650:CDS 50.0%
AAGCTTACACCGTTCGGTAG+TGG + chr1_1:63927449-63927468 Msa0035650:CDS 50.0%
AGGGCAACTGGAATAGCTCT+TGG - chr1_1:63927605-63927624 None:intergenic 50.0%
AGAGGCTTGAAAACTCTGGG+AGG - chr1_1:63927761-63927780 None:intergenic 50.0%
GTGAAAAAGGATGGTCCTGG+TGG - chr1_1:63925978-63925997 None:intergenic 50.0%
GCCAAAGAGGTGAAAATGGG+AGG - chr1_1:63926232-63926251 None:intergenic 50.0%
TCCAACATCGACAGCTTCAC+CGG - chr1_1:63926375-63926394 None:intergenic 50.0%
TGAAGTAGTACGCCATCCAG+AGG + chr1_1:63927112-63927131 Msa0035650:CDS 50.0%
GAAGCAACATTGGAGCTGGA+GGG - chr1_1:63927259-63927278 None:intergenic 50.0%
CTAGGAAGCAACATTGGAGC+TGG - chr1_1:63927263-63927282 None:intergenic 50.0%
! CAGCTCCAATGTTGCTTCCT+AGG + chr1_1:63927261-63927280 Msa0035650:CDS 50.0%
AAGCTTACACCGTTCGGTAG+TGG + chr1_1:63927449-63927468 Msa0035650:CDS 50.0%
AGGGCAACTGGAATAGCTCT+TGG - chr1_1:63927605-63927624 None:intergenic 50.0%
AGAGGCTTGAAAACTCTGGG+AGG - chr1_1:63927761-63927780 None:intergenic 50.0%
ACCGGTGAAGCTGTCGATGT+TGG + chr1_1:63926371-63926390 Msa0035650:CDS 55.0%
! GGATCTTCTTGTGGCGGGAA+CGG + chr1_1:63927055-63927074 Msa0035650:intron 55.0%
GGAACGGAGACATCGGCATA+TGG + chr1_1:63927071-63927090 Msa0035650:CDS 55.0%
GGAAGCAACATTGGAGCTGG+AGG - chr1_1:63927260-63927279 None:intergenic 55.0%
CTAACAGCAAGTGGTGAGCC+AGG - chr1_1:63927488-63927507 None:intergenic 55.0%
!! CTGGCTCACCACTTGCTGTT+AGG + chr1_1:63927486-63927505 Msa0035650:CDS 55.0%
ACCGGTGAAGCTGTCGATGT+TGG + chr1_1:63926371-63926390 Msa0035650:CDS 55.0%
! GGATCTTCTTGTGGCGGGAA+CGG + chr1_1:63927055-63927074 Msa0035650:intron 55.0%
GGAACGGAGACATCGGCATA+TGG + chr1_1:63927071-63927090 Msa0035650:CDS 55.0%
GGAAGCAACATTGGAGCTGG+AGG - chr1_1:63927260-63927279 None:intergenic 55.0%
CTAACAGCAAGTGGTGAGCC+AGG - chr1_1:63927488-63927507 None:intergenic 55.0%
!! CTGGCTCACCACTTGCTGTT+AGG + chr1_1:63927486-63927505 Msa0035650:CDS 55.0%
! TGTGGCGGGAACGGAGACAT+CGG + chr1_1:63927064-63927083 Msa0035650:CDS 60.0%
! TGTGGCGGGAACGGAGACAT+CGG + chr1_1:63927064-63927083 Msa0035650:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 63925861 63927858 63925861 ID=Msa0035650;Name=Msa0035650
chr1_1 mRNA 63925861 63927858 63925861 ID=Msa0035650-mRNA-1;Parent=Msa0035650;Name=Msa0035650-mRNA-1;_AED=0.00;_eAED=0.00;_QI=12|1|1|1|1|1|2|197|496
chr1_1 exon 63925861 63926757 63925861 ID=Msa0035650-mRNA-1:exon:20420;Parent=Msa0035650-mRNA-1
chr1_1 exon 63927056 63927858 63927056 ID=Msa0035650-mRNA-1:exon:20421;Parent=Msa0035650-mRNA-1
chr1_1 five_prime_UTR 63925861 63925872 63925861 ID=Msa0035650-mRNA-1:five_prime_utr;Parent=Msa0035650-mRNA-1
chr1_1 CDS 63925873 63926757 63925873 ID=Msa0035650-mRNA-1:cds;Parent=Msa0035650-mRNA-1
chr1_1 CDS 63927056 63927661 63927056 ID=Msa0035650-mRNA-1:cds;Parent=Msa0035650-mRNA-1
chr1_1 three_prime_UTR 63927662 63927858 63927662 ID=Msa0035650-mRNA-1:three_prime_utr;Parent=Msa0035650-mRNA-1
Gene Sequence

>Msa0035650

ATGGATTATATGACTAGTGCTATGCTCTTTTTGGTGACATGCATTGTCACATTCTTCATTGGTTCATTGCATGCAAGAAGCAGAAAATCAAACTACAAGCTTCCACCAGGACCATCCTTTTTCACCATCATGTCACATGTTGTTGAATTGTACAACAAGCCACAACAAACACTTGCAAAACTTGCTAAGTTATATGGTCCTATTATGCGTATTAAGTTATGCACAGAAACTACCATAATCATCTCATCATCACATATGGCCAAAGAGATTCTTTTTACTAATGATTCATTGTTCACTGATAGATCTGTTCCTGATAACACAACTACTCACAATCACAACAATTTTAGCTTAGTTTTCCTCCCATTTTCACCTCTTTGGCAACATCTTAGGAAAATATGTCATAATAATTTATTCTCTACCAAGACTCTTGATGGAAGTCAAGAACTTAGACGTATGAAATTAAAAGATCTTCTCAATGATATGCATAAAAGCAGCTTAACCGGTGAAGCTGTCGATGTTGGAAGAGCTGCTTTCAAGGCTTGCATTAATTTTCTGTCATATACTTTTGTGTCTCAAGATTTTGTTGAGAATTTAGATGATGAATATAAAAATATAGTGTCAACTCTATTAAGTGCTGTTGGAACACCAAACATTGCTGATCATTTCCCAGTGTTGAAGATTTTTGACCCACAAGGCATTAGAAGACACACTACTCTTTATGTTTCAAAAGTGTTCTATGCTTTGGATATCATAATTGACCAACGAATGAAAATGAGACAAAGTGAACAGTATATCTCCAAAAATGACATGCTAGACACCTTGTTGGACATTTCCAAGGAAGATAACCAAAAGATGGATAAAAGACAGATTAAGCATCTACTACTTGATCTTCTTGTGGCGGGAACGGAGACATCGGCATATGGATTAGAAAGGGCAATGAGTGAAGTAGTACGCCATCCAGAGGTTATGTCAAAAGCAAAGAAAGAACTAGAGGAAACCATTGGATTAGGCAAAGCAATTGAGGAATCAGATATTGATAGGCTTCCATACTTGAATGCAGTGATAAAAGAGAGTTTACGTTTACACCCTCCAGCTCCAATGTTGCTTCCTAGGAAAGCAAGGGTAGATGTGGAAATAGCAGGTTACACAATTCCAAAAGGTGCACAAGTTCTGATCAATGAATGGGCTATTGGTAGAACAGACATATGGGATGATGCTCATTTGTTTTCACCAGAAAGATTTTTGGGTTCTGAAATTGATGTCAAAGGTCGACATTTTAAGCTTACACCGTTCGGTAGTGGAAGACGTATATGTCCTGGCTCACCACTTGCTGTTAGGATGTTGCATTTGATGTTGGGATCATTGATCAACTCCTTTGATTGGAAACTTGAAAATGGTATGGAACCAAAGGACATGAACTTGGACAAACAACCAAGAGCTATTCCAGTTGCCCTAAACAAAGTATATGAAGTTATTAACCTCGTTGAATAA
Protein sequence

>Msa0035650

MDYMTSAMLFLVTCIVTFFIGSLHARSRKSNYKLPPGPSFFTIMSHVVELYNKPQQTLAKLAKLYGPIMRIKLCTETTIIISSSHMAKEILFTNDSLFTDRSVPDNTTTHNHNNFSLVFLPFSPLWQHLRKICHNNLFSTKTLDGSQELRRMKLKDLLNDMHKSSLTGEAVDVGRAAFKACINFLSYTFVSQDFVENLDDEYKNIVSTLLSAVGTPNIADHFPVLKIFDPQGIRRHTTLYVSKVFYALDIIIDQRMKMRQSEQYISKNDMLDTLLDISKEDNQKMDKRQIKHLLLDLLVAGTETSAYGLERAMSEVVRHPEVMSKAKKELEETIGLGKAIEESDIDRLPYLNAVIKESLRLHPPAPMLLPRKARVDVEIAGYTIPKGAQVLINEWAIGRTDIWDDAHLFSPERFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENGMEPKDMNLDKQPRAIPVALNKVYEVINLVE*