AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0035660

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035660 MtrunA17_Chr1g0197851 95.706 489 21 0 16 504 1 489 0.0 975
Msa0035660 MtrunA17_Chr1g0197891 95.297 489 23 0 16 504 1 489 0.0 965
Msa0035660 MtrunA17_Chr1g0197881 95.287 488 22 1 16 503 1 487 0.0 964
Msa0035660 MtrunA17_Chr1g0197871 88.454 485 56 0 16 500 1 485 0.0 891
Msa0035660 MtrunA17_Chr2g0314731 59.674 491 190 4 16 503 1 486 0.0 605
Msa0035660 MtrunA17_Chr2g0314721 58.218 505 199 4 1 502 1 496 0.0 597
Msa0035660 MtrunA17_Chr1g0176831 56.970 495 205 4 12 503 27 516 0.0 578
Msa0035660 MtrunA17_Chr5g0395321 53.799 487 215 4 13 496 4 483 0.0 546
Msa0035660 MtrunA17_Chr5g0395331 54.031 459 205 2 44 496 32 490 0.0 537
Msa0035660 MtrunA17_Chr1g0160851 52.305 499 224 4 16 501 1 498 0.0 536
Msa0035660 MtrunA17_Chr1g0205361 53.015 481 222 3 16 493 1 480 0.0 533
Msa0035660 MtrunA17_Chr8g0356001 51.181 508 227 5 16 502 1 508 2.83e-180 515
Msa0035660 MtrunA17_Chr1g0205371 51.497 501 228 5 16 502 1 500 1.47e-174 500
Msa0035660 MtrunA17_Chr8g0355961 51.772 508 224 5 16 502 1 508 1.23e-173 498
Msa0035660 MtrunA17_Chr5g0395381 50.103 487 208 5 13 496 4 458 2.54e-173 496
Msa0035660 MtrunA17_Chr4g0039901 49.000 500 244 5 16 504 1 500 1.54e-171 493
Msa0035660 MtrunA17_Chr1g0164211 52.116 449 211 3 48 493 30 477 9.32e-165 475
Msa0035660 MtrunA17_Chr7g0246221 44.374 471 253 5 31 493 17 486 2.49e-146 429
Msa0035660 MtrunA17_Chr7g0246151 42.404 441 245 5 61 493 46 485 3.73e-126 377
Msa0035660 MtrunA17_Chr7g0246131 41.273 487 277 4 16 493 1 487 4.43e-126 377
Msa0035660 MtrunA17_Chr7g0246121 42.045 440 248 4 60 493 45 483 4.40e-122 367
Msa0035660 MtrunA17_Chr7g0246181 42.857 441 245 3 60 493 45 485 5.23e-122 367
Msa0035660 MtrunA17_Chr1g0160861 53.916 332 139 4 183 501 9 339 1.14e-120 357
Msa0035660 MtrunA17_Chr1g0200961 40.323 496 274 6 23 500 6 497 1.04e-115 350
Msa0035660 MtrunA17_Chr7g0265611 35.158 475 294 7 31 493 28 500 4.86e-102 316
Msa0035660 MtrunA17_Chr8g0344151 35.230 457 279 9 47 491 34 485 2.37e-96 301
Msa0035660 MtrunA17_Chr5g0444981 82.967 182 31 0 321 502 20 201 4.81e-95 287
Msa0035660 MtrunA17_Chr8g0344181 34.136 457 284 8 47 491 36 487 6.72e-95 297
Msa0035660 MtrunA17_Chr1g0176851 58.974 234 94 1 135 366 1 234 2.53e-93 283
Msa0035660 MtrunA17_Chr4g0057001 34.498 458 290 6 31 481 33 487 2.67e-93 293
Msa0035660 MtrunA17_Chr2g0310391 34.382 477 296 9 25 489 1 472 9.42e-93 291
Msa0035660 MtrunA17_Chr3g0086691 35.931 462 272 9 58 498 41 499 2.69e-92 290
Msa0035660 MtrunA17_Chr1g0213671 36.765 476 276 11 44 498 29 500 3.80e-92 290
Msa0035660 MtrunA17_Chr6g0484841 34.820 471 285 7 37 493 25 487 4.98e-92 290
Msa0035660 MtrunA17_Chr3g0086661 36.876 461 269 8 58 498 41 499 3.12e-90 285
Msa0035660 MtrunA17_Chr2g0310381 33.680 481 302 9 25 493 1 476 4.61e-90 284
Msa0035660 MtrunA17_Chr8g0344191 32.525 495 315 10 10 491 31 519 7.99e-90 285
Msa0035660 MtrunA17_Chr3g0086651 36.422 464 273 8 58 501 41 502 8.08e-90 284
Msa0035660 MtrunA17_Chr5g0430101 33.333 492 306 8 16 493 1 484 1.23e-89 283
Msa0035660 MtrunA17_Chr5g0430031 32.165 485 316 6 19 493 6 487 3.72e-88 280
Msa0035660 MtrunA17_Chr4g0061381 35.541 453 262 10 69 498 51 496 1.07e-87 278
Msa0035660 MtrunA17_Chr5g0403351 34.016 488 289 9 29 493 9 486 1.39e-87 278
Msa0035660 MtrunA17_Chr5g0430131 33.680 481 302 6 24 493 12 486 2.82e-87 277
Msa0035660 MtrunA17_Chr3g0094171 33.401 494 307 10 21 499 15 501 3.51e-87 277
Msa0035660 MtrunA17_Chr8g0390881 33.333 492 302 9 23 499 14 494 5.83e-87 276
Msa0035660 MtrunA17_Chr5g0430091 32.922 486 313 6 24 499 12 494 1.03e-85 273
Msa0035660 MtrunA17_Chr7g0258221 33.610 482 298 9 16 481 2 477 1.42e-85 273
Msa0035660 MtrunA17_Chr7g0235551 33.195 482 302 9 16 481 2 479 2.61e-85 272
Msa0035660 MtrunA17_Chr8g0382901 35.256 468 282 10 37 493 480 937 9.89e-85 281
Msa0035660 MtrunA17_Chr8g0382901 33.053 475 290 8 22 489 1 454 1.46e-76 259
Msa0035660 MtrunA17_Chr4g0056951 34.772 417 262 5 73 481 68 482 1.32e-84 270
Msa0035660 MtrunA17_Chr2g0314781 67.232 177 53 2 328 503 1 173 1.82e-84 258
Msa0035660 MtrunA17_Chr5g0431641 33.753 477 297 10 29 493 14 483 4.45e-84 268
Msa0035660 MtrunA17_Chr3g0094231 33.827 473 290 10 41 499 30 493 1.36e-83 267
Msa0035660 MtrunA17_Chr7g0255531 31.417 487 302 9 23 489 1 475 3.10e-83 266
Msa0035660 MtrunA17_Chr6g0484811 31.887 461 303 5 42 493 30 488 4.98e-83 266
Msa0035660 MtrunA17_Chr8g0372251 34.755 469 267 9 43 488 31 483 1.47e-82 265
Msa0035660 MtrunA17_Chr3g0101581 30.632 506 312 11 19 499 10 501 5.51e-82 263
Msa0035660 MtrunA17_Chr5g0403321 33.476 466 287 8 41 489 26 485 6.29e-82 263
Msa0035660 MtrunA17_Chr3g0101711 32.193 497 308 8 30 504 9 498 8.60e-82 263
Msa0035660 MtrunA17_Chr5g0405001 31.325 498 316 9 8 489 5 492 9.34e-82 263
Msa0035660 MtrunA17_Chr1g0174471 30.645 496 319 9 2 480 6 493 1.26e-81 263
Msa0035660 MtrunA17_Chr5g0445461 34.583 480 296 11 23 493 13 483 3.78e-81 261
Msa0035660 MtrunA17_Chr1g0174481 30.335 478 313 8 13 478 1 470 4.38e-81 261
Msa0035660 MtrunA17_Chr5g0431671 33.043 460 288 9 45 493 34 484 6.96e-81 260
Msa0035660 MtrunA17_Chr6g0466331 33.891 478 296 10 21 483 2 474 2.65e-80 259
Msa0035660 MtrunA17_Chr8g0361471 33.891 478 296 10 21 483 2 474 3.17e-80 259
Msa0035660 MtrunA17_Chr6g0465511 33.891 478 296 10 21 483 2 474 6.19e-80 258
Msa0035660 MtrunA17_Chr3g0101721 33.406 461 288 8 45 493 33 486 7.48e-80 258
Msa0035660 MtrunA17_Chr5g0445451 32.985 479 305 9 23 493 13 483 2.30e-79 256
Msa0035660 MtrunA17_Chr1g0174451 30.992 484 309 10 12 478 1 476 2.45e-79 256
Msa0035660 MtrunA17_Chr3g0101631 31.799 478 303 10 26 491 11 477 2.68e-79 256
Msa0035660 MtrunA17_Chr3g0101701 33.042 457 292 7 49 495 38 490 3.20e-79 256
Msa0035660 MtrunA17_Chr1g0174461 30.290 482 313 9 13 478 1 475 3.21e-79 256
Msa0035660 MtrunA17_Chr3g0101731 31.828 487 312 10 18 493 7 484 3.31e-79 256
Msa0035660 MtrunA17_Chr5g0445441 33.333 477 298 9 23 489 54 520 8.52e-79 256
Msa0035660 MtrunA17_Chr5g0430081 32.587 491 308 8 24 499 10 492 1.54e-78 254
Msa0035660 MtrunA17_Chr3g0116681 32.203 472 300 9 31 489 18 482 3.10e-78 253
Msa0035660 MtrunA17_Chr3g0101611 31.116 466 295 8 43 493 32 486 4.49e-78 253
Msa0035660 MtrunA17_Chr3g0101671 33.060 487 307 9 24 495 8 490 5.08e-78 253
Msa0035660 MtrunA17_Chr3g0101691 33.691 466 295 9 49 504 38 499 1.08e-77 252
Msa0035660 MtrunA17_Chr4g0035921 31.590 497 299 13 21 490 11 493 1.96e-77 252
Msa0035660 MtrunA17_Chr1g0174441 30.020 493 326 9 3 478 7 497 4.75e-77 251
Msa0035660 MtrunA17_Chr5g0403331 31.356 472 308 8 30 489 16 483 6.40e-77 250
Msa0035660 MtrunA17_Chr5g0446161 31.405 484 308 9 24 495 14 485 8.38e-77 249
Msa0035660 MtrunA17_Chr4g0011981 32.538 461 291 9 41 488 21 474 9.92e-77 249
Msa0035660 MtrunA17_Chr3g0101571 31.373 459 295 9 46 493 33 482 2.21e-76 248
Msa0035660 MtrunA17_Chr4g0020041 32.784 485 295 13 30 493 11 485 2.98e-76 248
Msa0035660 MtrunA17_Chr4g0011961 31.470 483 308 10 21 490 3 475 3.34e-76 248
Msa0035660 MtrunA17_Chr4g0030701 33.188 458 284 9 41 478 25 480 1.13e-75 247
Msa0035660 MtrunA17_Chr1g0162811 32.653 490 303 11 24 495 5 485 1.17e-75 246
Msa0035660 MtrunA17_Chr4g0011901 31.004 458 300 9 44 490 24 476 1.56e-75 246
Msa0035660 MtrunA17_Chr3g0116741 29.352 494 327 10 27 503 26 514 1.64e-75 247
Msa0035660 MtrunA17_Chr4g0024771 31.902 489 307 10 12 489 6 479 3.91e-75 245
Msa0035660 MtrunA17_Chr3g0101601 32.238 487 306 13 22 493 3 480 5.60e-75 244
Msa0035660 MtrunA17_Chr3g0101651 32.618 466 300 8 49 504 38 499 6.81e-75 245
Msa0035660 MtrunA17_Chr3g0101621 31.866 477 307 10 22 489 3 470 1.59e-74 243
Msa0035660 MtrunA17_Chr4g0030711 32.227 422 265 8 76 478 64 483 1.97e-74 244
Msa0035660 MtrunA17_Chr6g0463801 31.435 474 296 7 49 503 37 500 2.93e-74 243
Msa0035660 MtrunA17_Chr3g0101661 31.673 502 326 8 16 504 1 498 4.47e-74 243
Msa0035660 MtrunA17_Chr1g0156101 31.992 472 284 10 50 494 33 494 5.80e-74 243
Msa0035660 MtrunA17_Chr3g0101811 30.737 475 303 8 41 493 29 499 7.27e-74 243
Msa0035660 MtrunA17_Chr3g0101761 33.740 492 300 10 18 495 7 486 1.66e-73 241
Msa0035660 MtrunA17_Chr4g0058281 28.817 465 316 6 23 478 23 481 1.79e-73 241
Msa0035660 MtrunA17_Chr4g0076161 31.590 497 317 11 21 504 11 497 6.20e-73 239
Msa0035660 MtrunA17_Chr7g0224561 30.462 476 299 9 21 478 9 470 6.28e-73 240
Msa0035660 MtrunA17_Chr6g0472311 31.953 507 291 13 20 490 7 495 6.94e-73 240
Msa0035660 MtrunA17_Chr3g0101751 33.803 497 295 12 21 495 9 493 8.38e-73 239
Msa0035660 MtrunA17_Chr3g0084921 28.717 491 321 10 12 481 1 483 1.54e-72 239
Msa0035660 MtrunA17_Chr1g0207841 32.394 426 269 8 70 478 59 482 1.64e-72 239
Msa0035660 MtrunA17_Chr4g0058231 31.950 482 308 7 19 488 5 478 1.78e-72 238
Msa0035660 MtrunA17_Chr3g0101821 33.061 490 303 9 22 493 2 484 2.01e-72 238
Msa0035660 MtrunA17_Chr4g0047691 30.677 502 296 12 21 491 16 496 2.94e-72 238
Msa0035660 MtrunA17_Chr7g0224551 30.462 476 299 10 21 478 9 470 3.12e-72 238
Msa0035660 MtrunA17_Chr3g0101801 33.932 501 298 12 16 493 1 491 5.56e-72 237
Msa0035660 MtrunA17_Chr8g0362701 30.533 488 312 10 12 481 1 479 8.21e-72 237
Msa0035660 MtrunA17_Chr5g0430111 34.368 419 257 6 24 430 12 424 1.02e-71 234
Msa0035660 MtrunA17_Chr5g0445381 31.524 479 308 10 25 493 46 514 1.28e-71 237
Msa0035660 MtrunA17_Chr7g0254641 29.362 470 314 7 35 488 25 492 1.30e-71 236
Msa0035660 MtrunA17_Chr5g0445531 32.328 464 296 10 38 493 29 482 3.32e-71 235
Msa0035660 MtrunA17_Chr5g0419691 32.258 465 293 10 41 491 21 477 7.79e-71 234
Msa0035660 MtrunA17_Chr4g0047641 31.504 492 312 9 21 493 14 499 9.56e-71 234
Msa0035660 MtrunA17_Chr4g0058191 30.720 472 317 7 23 488 1 468 1.63e-70 233
Msa0035660 MtrunA17_Chr1g0162801 33.603 494 308 11 16 495 1 488 2.34e-70 233
Msa0035660 MtrunA17_Chr4g0011921 30.290 482 316 10 21 490 3 476 1.21e-69 231
Msa0035660 MtrunA17_Chr4g0047661 29.362 470 324 5 30 491 29 498 2.29e-69 231
Msa0035660 MtrunA17_Chr5g0446151 29.362 470 303 9 40 495 32 486 2.79e-69 230
Msa0035660 MtrunA17_Chr5g0445421 32.150 479 288 9 23 493 87 536 3.44e-69 231
Msa0035660 MtrunA17_Chr5g0431501 29.322 457 305 7 49 492 33 484 4.81e-69 229
Msa0035660 MtrunA17_Chr5g0431461 29.322 457 305 7 49 492 33 484 4.81e-69 229
Msa0035660 MtrunA17_Chr5g0401691 32.213 506 305 12 18 504 28 514 7.57e-69 229
Msa0035660 MtrunA17_Chr5g0419451 31.155 459 283 11 34 476 45 486 1.24e-68 229
Msa0035660 MtrunA17_Chr3g0101831 32.653 490 317 9 12 493 1 485 1.25e-68 228
Msa0035660 MtrunA17_Chr3g0101741 33.094 417 261 7 84 493 1 406 1.53e-68 226
Msa0035660 MtrunA17_Chr4g0011871 31.304 460 305 7 41 491 21 478 2.19e-68 227
Msa0035660 MtrunA17_Chr4g0047631 29.400 483 297 9 32 491 32 493 2.59e-68 228
Msa0035660 MtrunA17_Chr4g0046351 31.860 430 260 9 70 478 57 474 1.08e-67 226
Msa0035660 MtrunA17_Chr6g0463791 30.390 487 318 12 30 504 16 493 1.11e-67 226
Msa0035660 MtrunA17_Chr8g0357431 33.983 462 283 10 45 493 33 485 1.38e-67 226
Msa0035660 MtrunA17_Chr4g0039391 32.326 430 274 9 70 488 56 479 1.76e-67 225
Msa0035660 MtrunA17_Chr4g0058201 30.396 454 308 5 42 488 21 473 2.65e-67 224
Msa0035660 MtrunA17_Chr5g0431511 29.956 454 302 8 49 490 33 482 5.00e-67 224
Msa0035660 MtrunA17_Chr4g0046321 31.776 428 259 9 72 478 59 474 1.27e-66 223
Msa0035660 MtrunA17_Chr5g0401681 30.898 479 299 9 21 487 11 469 2.84e-66 222
Msa0035660 MtrunA17_Chr4g0046331 31.637 452 270 12 50 475 35 473 4.11e-66 222
Msa0035660 MtrunA17_Chr8g0362481 30.340 412 271 8 84 481 1 410 9.39e-66 219
Msa0035660 MtrunA17_Chr1g0167321 33.607 488 306 10 21 495 3 485 2.22e-65 219
Msa0035660 MtrunA17_Chr8g0357421 33.047 466 281 10 45 493 33 484 2.40e-65 219
Msa0035660 MtrunA17_Chr5g0406651 31.210 471 308 9 30 491 15 478 6.71e-65 218
Msa0035660 MtrunA17_Chr6g0451741 30.452 509 302 15 9 475 14 512 1.60e-64 219
Msa0035660 MtrunA17_Chr2g0296651 29.980 497 313 12 23 503 12 489 6.27e-64 216
Msa0035660 MtrunA17_Chr6g0451781 31.390 446 274 11 69 488 96 535 9.37e-64 217
Msa0035660 MtrunA17_Chr4g0058261 28.604 444 307 6 44 478 57 499 9.83e-64 216
Msa0035660 MtrunA17_Chr7g0218611 29.565 460 306 9 43 490 27 480 1.48e-63 214
Msa0035660 MtrunA17_Chr5g0430071 38.194 288 162 5 218 493 57 340 1.52e-63 211
Msa0035660 MtrunA17_Chr4g0053621 29.020 510 320 12 22 504 8 502 2.28e-63 214
Msa0035660 MtrunA17_Chr4g0017411 32.237 456 289 7 32 483 15 454 2.33e-63 214
Msa0035660 MtrunA17_Chr8g0377341 31.092 476 307 13 11 476 31 495 1.15e-62 213
Msa0035660 MtrunA17_Chr6g0451641 31.365 491 289 18 31 487 18 494 2.86e-62 212
Msa0035660 MtrunA17_Chr6g0451691 30.625 480 291 14 29 475 24 494 5.19e-62 211
Msa0035660 MtrunA17_Chr1g0156081 32.409 469 286 11 50 494 57 518 6.81e-62 211
Msa0035660 MtrunA17_Chr7g0218601 27.484 473 321 10 32 490 15 479 7.66e-62 210
Msa0035660 MtrunA17_Chr4g0052881 31.106 479 307 8 16 483 1 467 1.51e-61 209
Msa0035660 MtrunA17_Chr4g0052861 29.759 457 299 7 31 477 16 460 1.72e-61 209
Msa0035660 MtrunA17_Chr4g0052851 31.155 459 295 8 37 491 23 464 5.46e-61 207
Msa0035660 MtrunA17_Chr3g0082701 29.842 506 315 12 16 488 5 503 5.91e-61 209
Msa0035660 MtrunA17_Chr1g0198191 28.270 474 311 13 21 476 21 483 8.74e-61 208
Msa0035660 MtrunA17_Chr6g0451751 29.098 488 300 13 22 475 15 490 1.07e-60 208
Msa0035660 MtrunA17_Chr4g0008101 28.601 486 306 11 21 475 15 490 1.06e-59 205
Msa0035660 MtrunA17_Chr8g0339311 29.167 480 292 12 29 487 48 500 1.55e-59 205
Msa0035660 MtrunA17_Chr6g0451681 29.424 469 268 10 16 475 29 443 2.36e-58 200
Msa0035660 MtrunA17_Chr4g0011881 29.600 500 275 10 30 490 15 476 1.41e-57 199
Msa0035660 MtrunA17_Chr2g0280261 31.250 464 300 6 41 495 26 479 3.97e-57 197
Msa0035660 MtrunA17_Chr6g0466941 31.028 506 304 19 16 487 1 495 4.38e-56 195
Msa0035660 MtrunA17_Chr1g0156061 30.786 458 259 8 41 494 47 450 6.09e-56 194
Msa0035660 MtrunA17_Chr7g0258211 28.049 492 319 12 16 481 1 483 6.28e-56 194
Msa0035660 MtrunA17_Chr5g0431591 34.409 279 175 4 217 489 21 297 3.51e-55 187
Msa0035660 MtrunA17_Chr6g0466901 30.815 503 308 16 16 487 1 494 1.37e-54 191
Msa0035660 MtrunA17_Chr8g0346261 32.673 404 251 12 83 476 121 513 2.09e-54 191
Msa0035660 MtrunA17_Chr8g0351801 28.635 447 290 9 71 492 56 498 4.95e-54 190
Msa0035660 MtrunA17_Chr4g0046631 29.120 443 292 10 61 487 60 496 1.24e-52 186
Msa0035660 MtrunA17_Chr1g0200951 27.729 458 308 13 36 476 46 497 2.44e-52 185
Msa0035660 MtrunA17_Chr2g0310351 45.251 179 97 1 312 489 1 179 5.46e-52 175
Msa0035660 MtrunA17_Chr6g0458561 27.119 472 323 8 21 475 27 494 9.92e-52 184
Msa0035660 MtrunA17_Chr8g0339331 27.655 452 292 12 50 475 39 481 2.33e-51 182
Msa0035660 MtrunA17_Chr2g0304871 28.000 475 304 14 29 475 17 481 7.36e-51 181
Msa0035660 MtrunA17_Chr1g0174431 45.506 178 88 3 312 481 1 177 1.25e-50 172
Msa0035660 MtrunA17_Chr8g0390871 40.291 206 120 3 290 493 5 209 1.95e-50 172
Msa0035660 MtrunA17_Chr2g0314771 53.750 160 72 1 84 241 1 160 2.33e-50 169
Msa0035660 MtrunA17_Chr4g0058211 43.085 188 103 2 305 488 9 196 3.48e-50 171
Msa0035660 MtrunA17_Chr3g0107611 28.160 451 302 9 48 476 49 499 6.05e-50 179
Msa0035660 MtrunA17_Chr5g0423621 45.055 182 87 3 328 498 1 180 6.78e-50 169
Msa0035660 MtrunA17_Chr2g0296661 30.396 454 284 9 70 499 53 498 1.49e-49 177
Msa0035660 MtrunA17_Chr4g0011851 42.553 188 107 1 305 491 9 196 3.74e-49 168
Msa0035660 MtrunA17_Chr8g0370641 26.186 485 334 11 16 478 7 489 9.78e-49 176
Msa0035660 MtrunA17_Chr1g0210091 27.103 428 291 10 70 481 87 509 7.94e-48 173
Msa0035660 MtrunA17_Chr8g0370651 26.200 500 337 14 17 490 8 501 1.04e-47 173
Msa0035660 MtrunA17_Chr5g0432751 24.670 454 327 6 35 475 19 470 2.66e-47 171
Msa0035660 MtrunA17_Chr5g0446101 37.500 216 130 3 285 496 85 299 2.79e-46 164
Msa0035660 MtrunA17_Chr4g0011941 43.889 180 100 1 312 490 1 180 1.16e-45 158
Msa0035660 MtrunA17_Chr3g0101591 40.000 180 107 1 311 489 38 217 2.22e-44 156
Msa0035660 MtrunA17_Chr3g0107541 25.581 430 304 6 65 478 67 496 5.75e-44 162
Msa0035660 MtrunA17_Chr2g0280081 28.406 433 274 16 73 481 558 978 1.84e-43 165
Msa0035660 MtrunA17_Chr2g0280081 28.995 438 279 14 66 481 50 477 5.08e-40 154
Msa0035660 MtrunA17_Chr6g0451771 41.935 186 102 4 307 488 17 200 3.27e-43 152
Msa0035660 MtrunA17_Chr2g0280071 26.680 491 309 16 23 481 39 510 1.16e-42 161
Msa0035660 MtrunA17_Chr6g0451811 40.000 185 105 4 308 488 1 183 6.49e-42 149
Msa0035660 MtrunA17_Chr8g0364651 25.581 473 322 12 23 477 7 467 9.22e-42 156
Msa0035660 MtrunA17_Chr4g0046681 40.212 189 105 4 302 487 25 208 1.02e-41 149
Msa0035660 MtrunA17_Chr2g0280121 28.774 424 272 14 80 481 68 483 1.50e-41 155
Msa0035660 MtrunA17_Chr8g0387101 28.538 424 285 10 80 488 66 486 4.85e-41 154
Msa0035660 MtrunA17_Chr5g0409051 25.102 490 329 13 24 483 3 484 7.55e-41 153
Msa0035660 MtrunA17_Chr5g0413911 26.452 465 310 11 49 483 42 504 9.68e-41 154
Msa0035660 MtrunA17_Chr4g0074581 22.541 488 346 13 12 476 33 511 2.96e-40 152
Msa0035660 MtrunA17_Chr5g0445371 35.593 236 115 5 258 489 7 209 1.92e-39 143
Msa0035660 MtrunA17_Chr3g0086681 49.655 145 68 3 352 491 5 149 3.56e-39 140
Msa0035660 MtrunA17_Chr6g0463621 38.384 198 116 4 312 504 1 197 5.17e-39 140
Msa0035660 MtrunA17_Chr6g0477081 33.745 243 144 4 182 419 9 239 1.03e-38 141
Msa0035660 MtrunA17_Chr2g0280041 27.054 499 329 16 6 481 23 509 2.94e-38 147
Msa0035660 MtrunA17_Chr5g0402981 41.520 171 91 4 324 490 4 169 7.28e-38 137
Msa0035660 MtrunA17_Chr5g0445761 47.674 172 89 1 312 482 1 172 1.39e-37 137
Msa0035660 MtrunA17_Chr4g0046661 40.000 180 105 2 305 481 18 197 3.87e-37 136
Msa0035660 MtrunA17_Chr5g0445351 41.026 156 91 1 339 493 51 206 4.63e-37 135
Msa0035660 MtrunA17_Chr5g0430041 35.404 161 102 2 338 496 1 161 8.67e-37 134
Msa0035660 MtrunA17_Chr5g0444971 78.049 82 18 0 95 176 1 82 1.48e-36 130
Msa0035660 MtrunA17_Chr8g0364631 28.633 461 280 16 49 477 32 475 6.52e-35 137
Msa0035660 MtrunA17_Chr2g0334021 24.891 458 312 12 46 483 30 475 2.22e-34 135
Msa0035660 MtrunA17_Chr3g0101541 43.704 135 75 1 360 493 1 135 2.25e-34 126
Msa0035660 MtrunA17_Chr2g0280061 38.587 184 103 5 307 481 3 185 3.63e-33 125
Msa0035660 MtrunA17_Chr2g0280011 38.043 184 104 5 307 481 3 185 3.78e-33 125
Msa0035660 MtrunA17_Chr8g0381571 26.160 474 290 18 15 459 2 444 1.08e-32 130
Msa0035660 MtrunA17_Chr8g0381541 26.160 474 290 18 15 459 2 444 1.91e-32 129
Msa0035660 MtrunA17_Chr5g0430151 32.911 158 104 2 338 493 1 158 9.89e-32 120
Msa0035660 MtrunA17_Chr4g0076171 37.158 183 89 4 328 504 1 163 4.76e-30 115
Msa0035660 MtrunA17_Chr5g0445361 45.133 113 61 1 382 493 8 120 6.10e-29 111
Msa0035660 MtrunA17_Chr3g0117301 40.171 117 69 1 363 478 1 117 1.64e-28 109
Msa0035660 MtrunA17_Chr4g0046701 39.231 130 76 2 355 481 2 131 3.48e-28 110
Msa0035660 MtrunA17_Chr3g0107551 32.941 170 110 2 311 476 4 173 3.87e-27 108
Msa0035660 MtrunA17_Chr4g0030761 41.667 120 50 3 363 478 1 104 7.94e-27 105
Msa0035660 MtrunA17_Chr5g0430171 33.636 220 144 1 24 243 12 229 2.60e-26 107
Msa0035660 MtrunA17_Chr3g0105761 34.118 170 106 3 313 478 1 168 5.73e-26 105
Msa0035660 MtrunA17_Chr4g0028321 43.750 112 60 3 381 490 27 137 8.87e-26 103
Msa0035660 MtrunA17_Chr2g0293411 26.739 460 286 21 21 459 13 442 1.08e-25 110
Msa0035660 MtrunA17_Chr8g0351401 30.568 229 146 4 265 480 256 484 2.13e-25 109
Msa0035660 MtrunA17_Chr0c19g0493771 30.350 257 164 8 237 484 376 626 1.93e-23 104
Msa0035660 MtrunA17_Chr4g0030741 24.299 321 222 6 25 335 40 349 3.20e-23 100
Msa0035660 MtrunA17_Chr8g0339861 25.862 464 276 17 41 479 39 459 4.20e-23 102
Msa0035660 MtrunA17_Chr1g0204271 28.696 230 144 6 266 480 256 480 1.20e-22 100
Msa0035660 MtrunA17_Chr3g0135841 25.257 487 292 17 51 483 44 512 1.22e-22 101
Msa0035660 MtrunA17_Chr2g0293421 24.587 484 316 20 19 485 15 466 2.94e-22 99.8
Msa0035660 MtrunA17_Chr3g0116731 42.202 109 56 3 365 471 3 106 5.68e-22 92.0
Msa0035660 MtrunA17_Chr8g0351311 25.205 365 237 13 141 480 133 486 7.41e-22 98.6
Msa0035660 MtrunA17_Chr1g0174421 25.000 304 219 5 18 315 19 319 1.24e-21 95.9
Msa0035660 MtrunA17_Chr5g0400411 33.500 200 119 5 267 459 252 444 1.58e-21 97.4
Msa0035660 MtrunA17_Chr5g0400421 35.227 176 100 5 291 459 277 445 3.80e-21 96.3
Msa0035660 MtrunA17_Chr5g0396521 30.417 240 132 7 275 483 312 547 6.11e-21 96.3
Msa0035660 MtrunA17_Chr5g0443401 21.687 498 312 16 12 478 1 451 6.87e-21 95.5
Msa0035660 MtrunA17_Chr8g0351391 24.309 362 243 13 141 480 133 485 6.92e-21 95.9
Msa0035660 MtrunA17_Chr3g0113321 27.143 280 178 9 203 476 182 441 4.84e-20 92.8
Msa0035660 MtrunA17_Chr8g0351421 26.293 232 158 3 265 483 256 487 1.29e-19 91.7
Msa0035660 MtrunA17_Chr4g0004481 28.505 214 141 6 267 472 251 460 1.36e-19 91.7
Msa0035660 MtrunA17_Chr1g0176861 46.316 95 50 1 12 106 1 94 3.25e-19 82.8
Msa0035660 MtrunA17_Chr5g0403931 26.220 492 299 22 13 478 1 454 3.95e-19 90.1
Msa0035660 MtrunA17_Chr8g0351441 26.378 254 166 5 265 497 255 508 4.11e-19 90.1
Msa0035660 MtrunA17_Chr8g0351461 27.586 232 155 5 265 483 255 486 1.71e-18 88.2
Msa0035660 MtrunA17_Chr2g0313821 26.222 225 152 6 264 478 269 489 1.86e-18 88.2
Msa0035660 MtrunA17_Chr3g0089361 28.959 221 148 6 263 480 239 453 3.28e-18 87.4
Msa0035660 MtrunA17_Chr5g0445751 30.114 176 118 3 24 198 19 190 3.61e-18 85.5
Msa0035660 MtrunA17_Chr2g0321171 27.700 213 145 4 266 475 261 467 8.29e-18 86.3
Msa0035660 MtrunA17_Chr3g0141801 22.718 493 323 16 8 478 1 457 9.06e-18 85.9
Msa0035660 MtrunA17_Chr5g0429651 30.729 192 118 5 283 459 271 462 1.06e-17 85.9
Msa0035660 MtrunA17_Chr3g0089351 28.125 224 146 6 263 480 157 371 1.70e-17 84.3
Msa0035660 MtrunA17_Chr8g0372591 29.167 144 97 2 310 448 1 144 2.06e-17 79.0
Msa0035660 MtrunA17_Chr4g0056981 50.704 71 35 0 338 408 1 71 2.86e-17 76.3
Msa0035660 MtrunA17_Chr4g0011861 28.667 150 106 1 41 189 21 170 3.13e-17 82.4
Msa0035660 MtrunA17_Chr2g0313771 27.642 246 165 6 243 478 254 496 4.69e-17 84.0
Msa0035660 MtrunA17_Chr1g0203141 28.054 221 143 9 266 478 276 488 6.33e-17 83.6
Msa0035660 MtrunA17_Chr1g0151221 31.004 229 143 9 263 483 283 504 6.63e-17 83.6
Msa0035660 MtrunA17_Chr2g0313831 27.273 231 153 8 259 478 263 489 7.61e-17 83.2
Msa0035660 MtrunA17_Chr5g0443731 28.293 205 133 5 281 478 249 446 9.36e-17 82.8
Msa0035660 MtrunA17_Chr2g0313751 25.301 249 173 6 240 478 271 516 9.69e-17 83.2
Msa0035660 MtrunA17_Chr7g0248991 31.000 200 125 7 237 429 158 351 1.01e-16 82.0
Msa0035660 MtrunA17_Chr1g0179811 22.803 421 301 12 73 478 101 512 1.15e-16 82.8
Msa0035660 MtrunA17_Chr2g0313761 24.324 333 212 9 159 480 183 486 1.42e-16 82.4
Msa0035660 MtrunA17_Chr8g0387001 30.348 201 128 5 271 459 259 459 1.49e-16 82.4
Msa0035660 MtrunA17_Chr7g0215181 25.633 316 220 10 170 480 179 484 1.83e-16 82.0
Msa0035660 MtrunA17_Chr3g0107501 28.216 241 151 6 266 498 237 463 1.93e-16 82.0
Msa0035660 MtrunA17_Chr4g0011931 27.273 154 107 3 22 173 4 154 2.05e-16 80.1
Msa0035660 MtrunA17_Chr7g0235261 28.899 218 141 6 267 474 266 479 2.85e-16 81.3
Msa0035660 MtrunA17_Chr2g0307291 24.412 340 217 10 150 478 181 491 3.35e-16 81.3
Msa0035660 MtrunA17_Chr1g0204241 28.713 202 134 6 283 478 72 269 4.65e-16 79.0
Msa0035660 MtrunA17_Chr2g0313781 28.261 230 146 8 262 478 278 501 4.82e-16 80.9
Msa0035660 MtrunA17_Chr2g0310371 29.655 145 99 1 25 166 1 145 5.65e-16 75.1
Msa0035660 MtrunA17_Chr4g0026941 30.899 178 120 3 301 475 331 508 6.86e-16 80.5
Msa0035660 MtrunA17_Chr2g0313791 25.581 301 196 10 188 478 202 484 7.64e-16 80.1
Msa0035660 MtrunA17_Chr5g0397971 20.421 475 331 14 18 477 2 444 7.75e-16 80.1
Msa0035660 MtrunA17_Chr1g0207851 24.701 251 170 7 76 310 65 312 7.92e-16 79.0
Msa0035660 MtrunA17_Chr1g0176841 63.462 52 15 1 452 503 1 48 8.86e-16 71.2
Msa0035660 MtrunA17_Chr1g0203151 28.000 225 144 10 266 481 272 487 9.35e-16 79.7
Msa0035660 MtrunA17_Chr5g0423601 39.024 82 50 0 132 213 1 82 1.12e-15 72.8
Msa0035660 MtrunA17_Chr6g0449381 25.877 228 160 6 266 484 257 484 1.82e-15 79.0
Msa0035660 MtrunA17_Chr8g0334941 28.241 216 146 5 281 488 97 311 2.14e-15 77.4
Msa0035660 MtrunA17_Chr2g0307301 25.926 324 193 11 169 478 201 491 2.79e-15 78.6
Msa0035660 MtrunA17_Chr1g0163281 27.155 232 154 7 263 481 266 495 3.20e-15 78.2
Msa0035660 MtrunA17_Chr4g0063221 30.000 170 116 3 311 478 324 492 3.21e-15 78.2
Msa0035660 MtrunA17_Chr2g0313801 26.887 212 137 6 280 478 283 489 4.60e-15 77.8
Msa0035660 MtrunA17_Chr7g0227281 24.771 218 156 5 263 472 245 462 6.76e-15 77.0
Msa0035660 MtrunA17_Chr6g0472221 28.378 222 143 7 266 478 285 499 7.18e-15 77.0
Msa0035660 MtrunA17_Chr3g0104351 27.835 194 123 5 283 459 277 470 8.53e-15 77.0
Msa0035660 MtrunA17_Chr4g0004601 28.440 218 142 6 267 474 287 500 9.14e-15 76.6
Msa0035660 MtrunA17_Chr4g0038271 23.651 241 168 6 261 485 302 542 1.15e-14 76.6
Msa0035660 MtrunA17_Chr6g0449341 27.000 200 137 5 284 474 333 532 1.27e-14 76.6
Msa0035660 MtrunA17_Chr6g0449361 25.472 212 148 5 283 484 271 482 1.36e-14 76.3
Msa0035660 MtrunA17_Chr8g0348751 30.806 211 131 7 263 459 255 464 1.79e-14 75.9
Msa0035660 MtrunA17_Chr7g0260821 24.887 221 150 6 261 474 259 470 2.13e-14 75.5
Msa0035660 MtrunA17_Chr2g0313811 26.316 228 148 8 264 478 281 501 2.39e-14 75.5
Msa0035660 MtrunA17_Chr8g0380471 28.333 240 160 8 247 480 219 452 2.48e-14 75.1
Msa0035660 MtrunA17_Chr8g0381551 23.295 352 220 14 15 342 2 327 2.79e-14 73.9
Msa0035660 MtrunA17_Chr7g0227291 25.455 220 152 6 263 472 245 462 3.25e-14 75.1
Msa0035660 MtrunA17_Chr6g0463611 22.628 274 197 8 30 297 30 294 3.42e-14 73.6
Msa0035660 MtrunA17_Chr5g0445411 28.916 166 111 3 13 176 14 174 3.71e-14 70.9
Msa0035660 MtrunA17_Chr5g0446131 24.797 246 172 6 243 478 245 487 4.49e-14 74.7
Msa0035660 MtrunA17_Chr1g0163371 27.835 194 129 5 297 481 7 198 4.66e-14 71.6
Msa0035660 MtrunA17_Chr6g0449351 25.225 222 155 6 274 484 221 442 4.77e-14 74.3
Msa0035660 MtrunA17_Chr2g0288661 24.390 246 173 6 243 478 249 491 5.13e-14 74.3
Msa0035660 MtrunA17_Chr6g0479681 25.217 230 147 9 274 481 279 505 6.65e-14 73.9
Msa0035660 MtrunA17_Chr4g0046691 24.082 245 177 4 61 303 53 290 6.99e-14 72.4
Msa0035660 MtrunA17_Chr1g0184421 23.779 307 211 8 188 485 192 484 9.69e-14 73.6
Msa0035660 MtrunA17_Chr3g0107561 24.026 308 211 6 16 300 1 308 1.17e-13 72.0
Msa0035660 MtrunA17_Chr1g0163511 27.461 193 127 6 292 474 299 488 2.24e-13 72.4
Msa0035660 MtrunA17_Chr7g0262111 23.112 437 287 13 58 478 75 478 2.42e-13 72.4
Msa0035660 MtrunA17_Chr4g0044841 27.619 210 141 5 274 478 242 445 2.42e-13 72.0
Msa0035660 MtrunA17_Chr7g0260831 24.664 223 148 7 261 474 258 469 2.55e-13 72.0
Msa0035660 MtrunA17_Chr5g0431631 35.593 118 74 1 41 156 42 159 4.48e-13 67.0
Msa0035660 MtrunA17_Chr1g0184461 25.773 194 132 5 301 485 294 484 5.42e-13 71.2
Msa0035660 MtrunA17_Chr5g0430051 41.053 95 56 0 22 116 11 105 6.60e-13 65.5
Msa0035660 MtrunA17_Chr1g0163451 24.623 199 141 5 292 481 302 500 9.61e-13 70.5
Msa0035660 MtrunA17_Chr1g0163391 27.477 222 143 7 274 481 261 478 1.31e-12 70.1
Msa0035660 MtrunA17_Chr7g0246141 34.545 110 66 2 216 322 5 111 1.75e-12 64.3
Msa0035660 MtrunA17_Chr8g0380501 27.136 199 133 5 263 451 241 437 1.88e-12 69.3
Msa0035660 MtrunA17_Chr1g0163421 23.684 190 138 4 299 481 327 516 3.24e-12 68.9
Msa0035660 MtrunA17_Chr5g0423611 34.211 76 50 0 225 300 1 76 8.80e-12 60.8
Msa0035660 MtrunA17_Chr5g0404861 34.146 123 77 3 358 479 17 136 1.51e-11 62.8
Msa0035660 MtrunA17_Chr8g0354541 28.378 148 102 4 333 478 6 151 1.53e-11 63.2
Msa0035660 MtrunA17_Chr3g0081401 32.886 149 79 6 356 483 20 168 2.81e-11 62.8
Msa0035660 MtrunA17_Chr6g0451801 23.000 300 206 9 16 292 5 302 7.42e-11 63.5
Msa0035660 MtrunA17_Chr8g0371761 26.712 146 92 3 331 461 1 146 8.77e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0035660 AT3G61040.1 42.637 455 249 5 48 495 32 481 2.58e-131 390
Msa0035660 AT2G45550.1 39.208 505 285 7 16 498 1 505 4.92e-128 382
Msa0035660 AT2G45560.1 38.933 506 285 7 16 498 1 505 5.15e-123 370
Msa0035660 AT2G45570.1 39.526 506 283 7 16 498 1 506 2.87e-121 365
Msa0035660 AT2G45580.1 40.000 460 255 5 59 498 48 506 5.45e-117 354
Msa0035660 AT1G33720.1 36.680 488 297 6 16 491 1 488 1.21e-114 348
Msa0035660 AT5G07990.1 35.119 504 300 13 19 501 1 498 2.29e-96 301
Msa0035660 AT1G33730.1 40.286 350 202 3 147 489 1 350 2.98e-94 291
Msa0035660 AT1G33730.2 40.286 350 202 3 147 489 1 350 2.98e-94 291
Msa0035660 AT1G33720.4 40.000 355 206 3 144 491 2 356 3.77e-92 286
Msa0035660 AT1G33720.3 40.000 355 206 3 144 491 2 356 3.77e-92 286
Msa0035660 AT1G33720.5 40.000 355 206 3 144 491 2 356 3.77e-92 286
Msa0035660 AT2G45580.2 41.311 351 185 5 168 498 3 352 3.77e-92 285
Msa0035660 AT5G44620.1 33.192 473 305 4 16 481 17 485 2.39e-90 286
Msa0035660 AT3G52970.1 32.869 502 307 11 18 498 14 506 5.24e-89 282
Msa0035660 AT3G61040.2 39.726 365 209 4 48 406 32 391 5.83e-89 278
Msa0035660 AT4G12320.1 33.974 468 294 6 26 481 20 484 3.85e-88 280
Msa0035660 AT3G26300.1 33.333 483 303 7 21 491 3 478 5.62e-88 279
Msa0035660 AT4G12300.1 33.619 467 297 6 24 481 20 482 2.01e-87 278
Msa0035660 AT3G26310.1 32.992 488 304 8 16 491 1 477 3.88e-87 277
Msa0035660 AT3G52970.2 31.977 516 307 11 18 498 14 520 6.35e-87 277
Msa0035660 AT4G12330.1 34.783 414 260 5 76 481 73 484 1.29e-86 276
Msa0035660 AT4G12310.1 35.154 421 259 5 73 481 68 486 4.55e-85 272
Msa0035660 AT4G22710.1 35.172 435 262 8 80 498 85 515 3.62e-84 270
Msa0035660 AT4G22690.1 35.172 435 262 8 80 498 116 546 9.86e-84 270
Msa0035660 AT1G33720.2 36.316 380 210 4 144 491 2 381 1.51e-83 265
Msa0035660 AT5G25140.1 32.218 478 310 7 24 492 3 475 7.66e-83 265
Msa0035660 AT3G26330.1 33.043 460 289 6 44 491 26 478 4.98e-82 263
Msa0035660 AT5G25120.1 31.381 478 312 8 24 491 3 474 5.78e-82 263
Msa0035660 AT5G25180.1 32.484 471 300 9 32 491 11 474 2.01e-81 262
Msa0035660 AT5G57260.1 32.328 464 295 7 42 491 23 481 4.74e-81 261
Msa0035660 AT3G26320.1 31.158 475 305 7 29 491 14 478 4.47e-80 258
Msa0035660 AT1G13080.1 32.056 496 311 11 23 500 9 496 2.13e-78 254
Msa0035660 AT4G13770.1 30.966 507 313 13 22 502 6 501 2.13e-78 254
Msa0035660 AT5G25130.1 32.150 479 307 8 24 491 3 474 4.48e-77 250
Msa0035660 AT2G45580.3 37.360 356 213 3 59 405 48 402 5.60e-77 248
Msa0035660 AT3G26180.1 31.417 487 305 10 25 491 5 482 6.46e-77 250
Msa0035660 AT2G40890.1 30.556 468 294 7 43 491 21 476 7.21e-77 250
Msa0035660 AT5G06900.1 31.174 494 319 9 15 498 3 485 3.82e-76 248
Msa0035660 AT3G26280.1 32.415 472 303 8 32 491 15 482 2.94e-75 246
Msa0035660 AT4G31500.1 32.851 484 291 15 26 490 10 478 2.95e-75 246
Msa0035660 AT3G26280.2 32.415 472 303 8 32 491 32 499 5.72e-75 246
Msa0035660 AT3G26170.1 30.081 492 313 10 19 491 3 482 9.36e-75 244
Msa0035660 AT5G67310.1 30.382 497 322 8 19 498 12 501 7.26e-74 242
Msa0035660 AT4G36220.1 31.306 444 273 8 70 490 61 495 7.42e-74 243
Msa0035660 AT4G37410.1 32.359 479 296 10 17 483 3 465 3.25e-73 241
Msa0035660 AT3G48280.1 31.602 462 303 7 22 478 3 456 4.91e-73 239
Msa0035660 AT3G26290.1 32.829 463 292 5 41 491 23 478 2.94e-72 238
Msa0035660 AT3G26290.2 32.829 463 292 5 41 491 36 491 3.42e-72 238
Msa0035660 AT1G74550.1 29.684 475 310 9 23 488 1 460 6.60e-72 237
Msa0035660 AT1G74540.1 30.989 455 282 9 37 476 17 454 8.20e-72 237
Msa0035660 AT3G26160.1 30.785 484 319 6 21 491 2 482 8.70e-72 237
Msa0035660 AT3G26270.1 32.563 476 297 10 43 500 26 495 9.43e-72 237
Msa0035660 AT2G02580.1 32.285 477 307 7 24 491 9 478 1.02e-71 236
Msa0035660 AT1G13110.1 31.504 492 307 9 21 491 2 484 2.49e-71 236
Msa0035660 AT3G26150.1 28.482 481 334 5 21 491 2 482 9.83e-71 234
Msa0035660 AT2G30770.1 32.200 441 285 10 49 481 33 467 1.67e-70 233
Msa0035660 AT4G13290.1 30.769 455 299 7 41 490 25 468 1.98e-70 233
Msa0035660 AT4G37360.1 31.667 480 302 11 21 488 3 468 5.54e-70 232
Msa0035660 AT4G13310.1 29.103 457 312 7 41 490 24 475 7.96e-70 231
Msa0035660 AT5G04330.1 30.937 459 288 11 50 488 33 482 1.04e-69 231
Msa0035660 AT4G37430.1 29.583 480 308 10 22 483 1 468 2.08e-68 228
Msa0035660 AT5G57220.1 31.590 497 306 13 16 496 1 479 2.52e-68 227
Msa0035660 AT3G26210.1 30.905 453 285 8 58 492 40 482 5.84e-68 227
Msa0035660 AT4G31940.1 30.980 510 315 12 21 499 4 507 1.91e-67 226
Msa0035660 AT4G37310.1 31.237 477 306 9 22 481 3 474 3.06e-67 225
Msa0035660 AT3G26230.1 30.629 493 317 9 30 500 3 492 6.84e-67 224
Msa0035660 AT2G24180.1 31.236 445 290 7 44 477 31 470 7.53e-67 224
Msa0035660 AT4G37340.1 31.250 480 294 14 24 488 10 468 1.84e-66 223
Msa0035660 AT4G37330.1 30.470 489 310 12 24 498 6 478 5.27e-66 221
Msa0035660 AT3G48310.1 29.345 443 297 9 41 478 26 457 8.07e-66 221
Msa0035660 AT5G36220.1 31.027 477 300 11 22 483 8 470 2.34e-65 220
Msa0035660 AT1G13090.2 32.128 470 277 10 43 487 22 474 5.62e-65 218
Msa0035660 AT3G48270.1 29.148 446 294 9 41 478 25 456 2.36e-64 217
Msa0035660 AT4G37370.1 32.112 464 280 13 30 477 13 457 3.05e-64 217
Msa0035660 AT4G31970.1 29.518 498 316 10 21 488 4 496 5.83e-64 217
Msa0035660 AT4G37400.1 31.294 425 267 10 75 487 57 468 9.72e-64 216
Msa0035660 AT1G01280.1 29.493 434 291 5 58 476 41 474 1.13e-63 216
Msa0035660 AT2G42250.1 29.032 465 309 7 33 481 25 484 1.94e-63 215
Msa0035660 AT3G26190.1 32.829 463 288 8 45 491 24 479 2.38e-63 214
Msa0035660 AT3G28740.1 33.333 453 267 12 41 477 33 466 2.69e-63 214
Msa0035660 AT2G23220.1 29.590 463 296 9 45 493 42 488 3.20e-63 214
Msa0035660 AT1G11610.1 32.468 462 290 11 43 490 29 482 6.89e-63 213
Msa0035660 AT1G11610.2 32.468 462 290 11 43 490 29 482 7.58e-63 213
Msa0035660 AT3G48290.1 29.505 444 299 8 39 478 25 458 2.64e-62 211
Msa0035660 AT3G44250.1 33.261 460 289 8 45 491 24 478 3.42e-62 211
Msa0035660 AT1G74110.1 29.935 461 296 13 38 476 52 507 3.54e-62 212
Msa0035660 AT3G26200.1 31.749 463 293 8 45 491 24 479 3.80e-62 211
Msa0035660 AT5G24950.1 29.306 447 307 6 49 489 32 475 4.28e-62 211
Msa0035660 AT1G13710.1 31.478 467 294 15 26 476 26 482 6.88e-62 211
Msa0035660 AT4G37320.1 30.108 465 293 14 37 487 21 467 1.25e-61 210
Msa0035660 AT3G53280.1 31.947 457 298 7 45 491 24 477 4.01e-61 208
Msa0035660 AT1G01190.1 31.343 469 290 14 34 488 61 511 4.95e-61 209
Msa0035660 AT3G48300.1 29.186 442 294 11 42 477 25 453 5.19e-61 208
Msa0035660 AT3G48300.2 29.186 442 294 11 42 477 27 455 5.43e-61 208
Msa0035660 AT1G01190.2 31.343 469 290 14 34 488 66 516 7.27e-61 209
Msa0035660 AT5G06905.1 28.660 485 322 8 16 480 1 481 8.05e-61 208
Msa0035660 AT2G23190.1 29.701 468 301 11 24 477 49 502 1.22e-60 208
Msa0035660 AT2G46660.1 30.837 454 291 12 51 494 72 512 1.64e-60 207
Msa0035660 AT3G20140.1 28.274 481 314 14 44 503 37 507 1.76e-60 207
Msa0035660 AT3G48320.1 29.979 477 315 10 21 489 3 468 3.00e-60 206
Msa0035660 AT1G66540.1 35.340 382 218 11 132 498 1 368 9.87e-60 202
Msa0035660 AT3G26830.1 29.019 479 314 8 24 487 7 474 1.13e-59 204
Msa0035660 AT3G53300.1 32.035 462 287 10 48 491 27 479 1.99e-59 204
Msa0035660 AT5G35715.1 32.117 411 262 10 94 491 11 417 2.05e-59 202
Msa0035660 AT1G13080.2 33.521 355 214 10 164 500 28 378 2.47e-59 201
Msa0035660 AT2G25160.1 31.687 486 291 13 22 475 4 480 2.72e-59 204
Msa0035660 AT5G10600.1 28.571 497 316 15 23 503 23 496 2.93e-59 204
Msa0035660 AT3G20130.1 28.806 427 277 9 71 480 65 481 1.49e-58 202
Msa0035660 AT2G30750.1 32.127 442 284 9 49 481 33 467 2.97e-58 201
Msa0035660 AT3G26220.1 31.965 463 297 9 43 491 23 481 3.07e-58 201
Msa0035660 AT5G42590.1 29.622 476 308 9 22 481 3 467 5.65e-58 200
Msa0035660 AT3G61880.1 31.356 472 295 14 37 494 57 513 2.55e-57 199
Msa0035660 AT4G15330.1 28.601 479 311 15 21 481 10 475 5.05e-57 198
Msa0035660 AT2G14100.1 28.355 462 289 11 65 499 60 506 6.67e-57 197
Msa0035660 AT4G15350.1 28.670 436 287 10 61 480 48 475 6.82e-57 197
Msa0035660 AT3G61880.2 31.356 472 295 14 37 494 57 513 7.63e-57 198
Msa0035660 AT1G50520.1 29.526 464 299 13 58 499 52 509 8.63e-57 198
Msa0035660 AT3G48290.2 27.872 470 299 9 39 478 25 484 9.39e-57 197
Msa0035660 AT3G20940.1 27.108 498 328 13 29 502 25 511 2.27e-56 196
Msa0035660 AT5G10610.1 28.337 487 306 14 16 481 1 465 2.88e-56 196
Msa0035660 AT5G42580.1 28.436 422 277 9 69 480 60 466 3.00e-56 196
Msa0035660 AT4G15360.1 28.776 490 314 14 12 479 1 477 4.81e-56 196
Msa0035660 AT5G24960.1 30.493 446 299 7 41 479 25 466 6.06e-56 195
Msa0035660 AT3G32047.1 27.854 438 296 9 69 496 63 490 1.28e-55 194
Msa0035660 AT3G20950.1 26.761 497 328 14 16 488 7 491 6.33e-55 192
Msa0035660 AT4G31950.1 29.303 488 298 11 21 477 4 475 1.19e-54 191
Msa0035660 AT3G20090.2 28.935 432 272 10 70 480 65 482 3.88e-54 191
Msa0035660 AT1G66540.2 37.460 315 175 9 192 498 9 309 5.15e-54 185
Msa0035660 AT3G25180.1 27.975 479 321 9 16 475 1 474 7.35e-54 189
Msa0035660 AT1G50560.1 28.540 452 293 11 71 499 66 510 9.86e-54 189
Msa0035660 AT3G26180.2 38.956 249 139 5 253 491 103 348 1.53e-53 185
Msa0035660 AT1G13100.1 29.730 444 278 9 80 503 56 485 1.56e-53 188
Msa0035660 AT5G36220.2 38.129 278 155 5 211 483 59 324 2.05e-53 184
Msa0035660 AT3G20960.2 27.803 446 285 10 75 500 68 496 6.64e-53 187
Msa0035660 AT3G10560.1 27.696 473 316 13 21 476 17 480 8.95e-53 186
Msa0035660 AT5G04660.1 28.986 414 276 10 76 476 71 479 2.89e-52 185
Msa0035660 AT2G27000.1 27.294 436 295 10 59 480 52 479 6.55e-52 184
Msa0035660 AT5G47990.1 28.842 423 276 11 70 476 64 477 1.01e-51 184
Msa0035660 AT4G15380.1 26.471 442 301 9 75 499 69 503 1.27e-51 184
Msa0035660 AT5G09970.1 28.233 464 311 17 39 488 60 515 1.68e-51 184
Msa0035660 AT3G20080.2 27.938 451 300 10 46 479 39 481 2.00e-51 183
Msa0035660 AT3G20080.1 27.938 451 300 10 46 479 39 481 2.00e-51 183
Msa0035660 AT5G04630.1 27.848 474 314 15 21 476 13 476 2.95e-51 182
Msa0035660 AT3G20100.1 25.499 451 309 10 70 499 63 507 4.06e-51 182
Msa0035660 AT1G79370.1 27.475 495 322 13 22 481 13 505 1.12e-50 181
Msa0035660 AT3G20120.4 26.214 515 338 16 19 502 5 508 7.46e-50 179
Msa0035660 AT4G39950.1 27.572 486 328 10 13 478 21 502 9.87e-50 179
Msa0035660 AT3G20110.1 26.987 478 326 12 15 480 5 471 1.24e-49 178
Msa0035660 AT2G22330.1 27.216 485 330 10 14 478 23 504 1.34e-49 179
Msa0035660 AT2G22330.2 27.216 485 330 10 14 478 46 527 2.10e-49 178
Msa0035660 AT4G39950.2 27.572 486 328 10 13 478 61 542 2.81e-49 178
Msa0035660 AT3G10570.1 28.641 412 275 11 78 476 75 480 1.45e-48 175
Msa0035660 AT5G05260.2 26.899 487 317 11 28 476 5 490 1.45e-48 176
Msa0035660 AT1G28430.1 27.945 433 285 10 65 480 57 479 6.25e-48 174
Msa0035660 AT3G20960.1 29.156 391 238 11 131 500 21 393 3.98e-47 169
Msa0035660 AT1G64940.1 26.994 489 321 12 19 483 8 484 4.34e-47 171
Msa0035660 AT1G11600.1 26.415 477 323 12 22 476 8 478 1.40e-46 170
Msa0035660 AT1G58260.1 25.562 489 332 12 21 481 9 493 1.61e-46 170
Msa0035660 AT4G15330.2 30.854 363 221 14 136 481 98 447 2.41e-46 168
Msa0035660 AT3G20130.2 26.856 458 279 11 41 480 34 453 2.97e-45 166
Msa0035660 AT2G30490.1 25.180 417 299 5 70 475 55 469 2.22e-44 164
Msa0035660 AT4G13310.2 26.757 370 263 4 41 405 24 390 3.47e-44 160
Msa0035660 AT3G20090.1 30.447 358 214 10 144 480 1 344 2.76e-43 158
Msa0035660 AT5G05260.1 25.873 487 290 12 28 476 5 458 1.14e-42 159
Msa0035660 AT1G16410.1 24.194 496 349 10 22 490 15 510 1.31e-42 159
Msa0035660 AT3G20120.2 27.822 381 244 12 144 502 1 372 4.31e-42 154
Msa0035660 AT3G20120.3 27.822 381 244 12 144 502 1 372 4.31e-42 154
Msa0035660 AT3G20120.1 27.822 381 244 12 144 502 1 372 4.31e-42 154
Msa0035660 AT2G27010.1 25.571 438 282 12 59 480 48 457 1.53e-41 155
Msa0035660 AT2G45560.2 30.592 304 198 5 16 307 1 303 6.82e-41 150
Msa0035660 AT1G64930.1 27.389 471 296 16 45 483 28 484 7.39e-41 154
Msa0035660 AT2G12190.1 26.850 473 305 15 41 483 24 485 9.17e-40 151
Msa0035660 AT3G20080.4 28.531 354 225 9 144 479 1 344 1.20e-39 148
Msa0035660 AT3G20080.5 28.531 354 225 9 144 479 1 344 1.20e-39 148
Msa0035660 AT3G20080.6 28.531 354 225 9 144 479 1 344 1.20e-39 148
Msa0035660 AT3G20080.3 28.531 354 225 9 144 479 1 344 1.20e-39 148
Msa0035660 AT5G25900.1 25.442 452 303 11 51 483 48 484 1.35e-39 150
Msa0035660 AT1G16400.1 24.896 482 324 11 40 490 35 509 1.46e-39 150
Msa0035660 AT1G64950.1 26.124 467 306 14 45 483 28 483 5.80e-39 149
Msa0035660 AT3G20935.1 34.468 235 125 5 274 480 74 307 8.83e-39 145
Msa0035660 AT4G20240.1 26.650 394 278 7 48 435 32 420 2.08e-38 146
Msa0035660 AT3G03470.1 26.793 474 296 15 45 483 27 484 1.03e-37 145
Msa0035660 AT2G05180.1 25.401 374 256 8 70 430 63 426 1.28e-37 144
Msa0035660 AT5G61320.1 28.471 425 255 14 81 483 66 463 2.13e-35 138
Msa0035660 AT2G45560.3 31.667 240 155 3 16 246 1 240 2.69e-35 132
Msa0035660 AT2G25160.2 29.469 414 254 11 22 406 4 408 9.23e-35 135
Msa0035660 AT1G64900.1 26.667 420 285 9 81 483 66 479 8.55e-34 134
Msa0035660 AT3G53290.1 31.643 414 242 11 99 499 8 393 3.66e-33 130
Msa0035660 AT5G35917.1 25.791 411 265 9 46 432 39 433 2.98e-31 126
Msa0035660 AT4G20240.2 25.138 362 262 5 48 405 32 388 8.30e-30 120
Msa0035660 AT5G24960.2 26.685 371 263 5 41 406 25 391 1.26e-28 117
Msa0035660 AT2G45510.1 23.434 495 323 15 19 480 11 482 1.55e-27 116
Msa0035660 AT1G16410.2 23.500 400 285 8 22 400 15 414 1.85e-27 114
Msa0035660 AT3G53305.1 45.946 148 68 3 358 498 183 325 8.48e-27 111
Msa0035660 AT3G25180.2 25.195 385 265 8 16 382 1 380 2.45e-26 111
Msa0035660 AT2G44890.1 23.989 371 237 10 141 480 126 482 4.72e-25 108
Msa0035660 AT3G44970.1 26.154 455 297 16 42 483 28 456 7.48e-25 107
Msa0035660 AT3G26125.1 24.533 375 243 10 141 480 138 507 8.94e-23 102
Msa0035660 AT1G05160.2 23.760 484 311 18 24 480 14 466 1.57e-21 97.8
Msa0035660 AT1G05160.1 23.760 484 311 18 24 480 14 466 1.57e-21 97.8
Msa0035660 AT5G48000.2 22.245 481 331 13 37 502 23 475 2.41e-21 97.4
Msa0035660 AT5G48000.4 22.245 481 331 13 37 502 23 475 2.41e-21 97.4
Msa0035660 AT5G48000.7 22.245 481 331 13 37 502 23 475 2.41e-21 97.4
Msa0035660 AT5G48000.6 22.245 481 331 13 37 502 23 475 2.41e-21 97.4
Msa0035660 AT5G48000.5 22.245 481 331 13 37 502 23 475 2.41e-21 97.4
Msa0035660 AT5G48000.3 22.245 481 331 13 37 502 23 475 2.41e-21 97.4
Msa0035660 AT3G19270.2 23.431 478 306 15 22 481 8 443 3.23e-21 96.7
Msa0035660 AT5G48000.1 22.245 481 331 13 37 502 64 516 4.34e-21 96.7
Msa0035660 AT2G44890.2 23.450 371 221 12 141 480 126 464 1.43e-20 95.1
Msa0035660 AT1G31800.1 32.124 193 124 5 300 488 362 551 1.87e-20 95.1
Msa0035660 AT2G32440.2 28.378 296 180 10 174 459 169 442 4.11e-20 93.6
Msa0035660 AT2G32440.1 28.378 296 180 10 174 459 169 442 4.11e-20 93.6
Msa0035660 AT1G13140.1 23.306 369 243 10 141 478 138 497 6.37e-20 93.2
Msa0035660 AT4G39500.1 23.989 371 254 11 138 485 81 446 9.61e-20 92.4
Msa0035660 AT4G39500.2 23.989 371 254 11 138 485 131 496 1.10e-19 92.4
Msa0035660 AT4G15110.1 29.167 240 135 7 275 483 320 555 3.02e-19 91.3
Msa0035660 AT1G13150.1 23.967 363 234 11 141 471 131 483 3.21e-19 91.3
Msa0035660 AT5G52320.1 27.826 230 154 6 265 485 256 482 3.70e-19 90.9
Msa0035660 AT5G52320.2 27.826 230 154 6 265 485 256 482 4.27e-19 90.5
Msa0035660 AT5G05690.3 31.980 197 124 5 284 476 132 322 6.19e-19 88.6
Msa0035660 AT3G19270.1 23.256 473 303 15 22 476 8 438 9.34e-19 89.4
Msa0035660 AT5G05690.1 31.980 197 124 5 284 476 251 441 1.26e-18 89.0
Msa0035660 AT1G57750.1 25.683 366 240 14 140 484 123 477 1.53e-18 89.0
Msa0035660 AT5G52400.1 31.132 212 139 6 266 475 283 489 1.66e-18 89.0
Msa0035660 AT5G38450.1 26.877 413 278 14 77 478 90 489 3.04e-18 88.2
Msa0035660 AT1G65340.1 26.872 227 153 6 265 481 256 479 3.51e-18 87.8
Msa0035660 AT2G27690.1 28.241 216 145 5 271 480 255 466 4.00e-18 87.4
Msa0035660 AT1G55940.2 30.631 222 137 8 269 478 251 467 9.18e-18 86.7
Msa0035660 AT1G24540.1 25.738 237 162 4 261 483 262 498 1.08e-17 86.3
Msa0035660 AT1G78490.1 24.051 474 313 16 22 478 8 451 1.27e-17 85.9
Msa0035660 AT3G53130.1 22.772 404 286 11 73 460 101 494 1.44e-17 85.9
Msa0035660 AT5G35920.1 33.333 138 82 3 369 496 6 143 2.24e-17 79.7
Msa0035660 AT4G32170.1 23.433 367 255 11 138 483 120 481 2.45e-17 85.1
Msa0035660 AT3G61035.1 25.564 266 175 7 58 314 51 302 3.68e-17 83.2
Msa0035660 AT1G55940.1 24.341 493 300 19 16 474 10 463 4.99e-17 84.0
Msa0035660 AT1G13140.2 27.700 213 139 5 281 478 259 471 5.22e-17 84.3
Msa0035660 AT5G08250.2 24.590 244 165 5 261 485 279 522 5.23e-17 84.3
Msa0035660 AT3G50660.1 25.361 485 299 19 41 484 31 493 5.50e-17 84.0
Msa0035660 AT1G11680.1 29.630 216 143 5 281 488 254 468 5.78e-17 84.0
Msa0035660 AT5G08250.1 24.590 244 165 5 261 485 217 460 7.83e-17 83.6
Msa0035660 AT5G45340.2 23.566 488 288 18 16 474 1 432 9.89e-17 82.8
Msa0035660 AT1G12740.4 22.453 481 316 18 23 477 1 450 1.58e-16 82.4
Msa0035660 AT3G14630.1 27.823 248 171 7 235 478 238 481 1.84e-16 82.4
Msa0035660 AT2G42850.1 28.070 171 113 4 312 478 293 457 2.01e-16 82.4
Msa0035660 AT4G39490.1 22.835 254 170 6 256 483 241 494 2.21e-16 82.4
Msa0035660 AT3G14630.2 27.823 248 171 7 235 478 293 536 2.29e-16 82.4
Msa0035660 AT4G00360.1 30.047 213 131 7 263 459 255 465 2.54e-16 82.0
Msa0035660 AT5G02900.1 25.943 212 146 6 301 502 268 478 4.26e-16 81.3
Msa0035660 AT4G39510.1 26.180 233 159 7 266 485 255 487 5.20e-16 80.9
Msa0035660 AT3G14620.1 28.899 218 148 6 264 478 275 488 5.64e-16 80.9
Msa0035660 AT5G23190.1 25.620 242 162 6 261 485 282 522 1.21e-15 80.1
Msa0035660 AT1G63710.1 28.700 223 144 6 261 471 254 473 1.25e-15 80.1
Msa0035660 AT1G47620.1 25.957 235 160 7 265 485 263 497 1.57e-15 79.7
Msa0035660 AT3G14610.1 26.267 217 154 5 266 478 271 485 1.70e-15 79.3
Msa0035660 AT3G13730.1 22.521 484 276 20 39 479 41 468 2.10e-15 79.0
Msa0035660 AT2G21910.1 29.412 204 134 7 290 484 285 487 2.93e-15 78.6
Msa0035660 AT2G26710.1 31.176 170 114 3 311 478 320 488 5.49e-15 77.8
Msa0035660 AT4G36380.1 29.808 208 128 7 283 479 289 489 8.71e-15 77.4
Msa0035660 AT1G69500.1 25.221 226 140 3 282 478 271 496 1.03e-14 77.0
Msa0035660 AT1G67110.1 34.014 147 91 5 334 478 341 483 1.34e-14 76.6
Msa0035660 AT4G39480.1 24.370 238 162 6 266 485 256 493 1.44e-14 76.6
Msa0035660 AT4G15300.2 21.294 479 318 17 25 481 7 448 2.24e-14 75.9
Msa0035660 AT2G26170.1 29.130 230 146 8 263 483 276 497 3.86e-14 75.1
Msa0035660 AT3G14660.2 24.082 245 178 7 238 478 99 339 4.49e-14 74.3
Msa0035660 AT1G01600.1 30.841 214 130 8 263 459 255 467 5.58e-14 74.7
Msa0035660 AT1G57750.2 31.250 160 98 5 290 443 283 436 8.04e-14 73.9
Msa0035660 AT2G23180.1 23.590 195 136 6 301 484 301 493 1.03e-13 73.9
Msa0035660 AT3G56630.1 28.936 235 147 11 250 474 242 466 1.07e-13 73.9
Msa0035660 AT4G15300.3 21.277 470 315 16 30 481 6 438 1.19e-13 73.6
Msa0035660 AT3G14660.1 24.082 245 178 7 238 478 245 485 1.23e-13 73.6
Msa0035660 AT3G14680.1 25.346 217 155 6 266 478 272 485 1.76e-13 73.2
Msa0035660 AT5G58860.1 29.688 192 120 5 283 459 271 462 2.21e-13 72.8
Msa0035660 AT1G34540.1 29.778 225 133 10 264 474 253 466 4.73e-13 71.6
Msa0035660 AT1G13090.1 25.271 277 172 7 43 301 22 281 6.86e-13 69.7
Msa0035660 AT3G14650.1 23.963 217 158 6 266 478 272 485 8.15e-13 71.2
Msa0035660 AT2G45970.1 30.000 190 114 7 287 459 277 464 1.33e-12 70.5
Msa0035660 AT5G63450.2 20.766 496 335 16 14 474 57 529 1.40e-12 70.5
Msa0035660 AT3G14640.1 24.091 220 161 5 263 478 270 487 1.76e-12 70.1
Msa0035660 AT2G29090.3 28.877 187 121 4 304 483 188 369 1.81e-12 69.3
Msa0035660 AT5G24900.2 25.926 243 165 9 247 478 145 383 1.88e-12 69.3
Msa0035660 AT2G29090.2 27.805 205 133 5 304 498 283 482 2.13e-12 69.7
Msa0035660 AT2G29090.1 27.805 205 133 5 304 498 283 482 2.13e-12 69.7
Msa0035660 AT3G14640.2 24.091 220 161 5 263 478 292 509 2.19e-12 69.7
Msa0035660 AT5G63450.1 20.648 494 334 16 16 474 1 471 2.27e-12 69.7
Msa0035660 AT5G24900.1 25.926 243 165 9 247 478 262 500 3.11e-12 69.3
Msa0035660 AT4G15300.1 20.747 482 329 17 30 481 2 460 4.45e-12 68.6
Msa0035660 AT3G14690.2 23.041 217 160 6 266 478 307 520 1.37e-11 67.4
Msa0035660 AT3G14690.1 23.041 217 160 6 266 478 272 485 1.55e-11 67.0
Msa0035660 AT5G14400.1 27.273 209 120 6 280 484 163 343 2.61e-11 65.9
Msa0035660 AT5G14400.2 27.273 209 120 6 280 484 217 397 3.75e-11 65.5
Msa0035660 AT3G50660.2 25.476 420 262 17 41 429 31 430 3.88e-11 65.5
Msa0035660 AT4G20235.1 39.744 78 45 2 405 480 255 332 5.80e-11 64.3
Msa0035660 AT3G48520.1 21.818 220 156 5 264 475 258 469 6.32e-11 65.1
Msa0035660 AT3G30290.1 23.982 221 155 5 269 479 159 376 7.42e-11 64.7

Find 94 sgRNAs with CRISPR-Local

Find 254 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TAACTTAATATACTTTGTTT+AGG 0.241029 1_1:-63940174 None:intergenic
TTTGATTGGAAACTTGAAAA+TGG 0.250759 1_1:+63940097 Msa0035660:CDS
CACCTCTTTGGCAACATCTT+AGG 0.253021 1_1:+63938792 Msa0035660:CDS
AACTTAATATACTTTGTTTA+GGG 0.259231 1_1:-63940173 None:intergenic
ATCAGAACTTGTGCACCTTT+TGG 0.270042 1_1:-63939875 None:intergenic
TCCTCCGATGATTTCAGATA+TGG 0.280084 1_1:+63938406 Msa0035660:CDS
TTCTCTACCAAGACTCTTGA+TGG 0.280959 1_1:+63938836 Msa0035660:CDS
CATTGATCAACTCCTTTGAT+TGG 0.288696 1_1:+63940083 Msa0035660:CDS
TTTATCACTGCATTCAAGTA+TGG 0.289738 1_1:-63939767 None:intergenic
GCAAAACTTGCTAAGTTATA+TGG 0.291749 1_1:+63938599 Msa0035660:CDS
TTCAAAAGTGTTCTATGCTT+TGG 0.301447 1_1:+63939147 Msa0035660:CDS
TGTTGCCAAAGAGGTGAAAA+TGG 0.310336 1_1:-63938785 None:intergenic
TATACTTTGTTTAGGGCAAC+TGG 0.343488 1_1:-63940166 None:intergenic
CATAACTTAATACGCATAAT+AGG 0.354037 1_1:-63938623 None:intergenic
CTGGCTCACCACTTGCTGTT+AGG 0.356556 1_1:+63940038 Msa0035660:CDS
CAGCTCCAATGTTGCTTCCT+AGG 0.358629 1_1:+63939813 Msa0035660:CDS
TGCATTGTCATGTTCTTCAT+TGG 0.364623 1_1:+63938464 Msa0035660:CDS
TTGTCCAAGTTCATGTCCTT+TGG 0.377792 1_1:-63940127 None:intergenic
TTGTATGGGGATGTAAAATA+TGG 0.389137 1_1:+63940333 Msa0035660:three_prime_UTR
GTGTAACACCTTCTACCTTA+AGG 0.390591 1_1:+63940219 Msa0035660:three_prime_UTR
TGTAACACCTTCTACCTTAA+GGG 0.391306 1_1:+63940220 Msa0035660:three_prime_UTR
TGTTGGAAGAGCTGCTTTCA+AGG 0.399048 1_1:+63938940 Msa0035660:CDS
TTGAGGAATCAGATATTGAT+AGG 0.399841 1_1:+63939741 Msa0035660:CDS
AGGATGTTGCATTTGATGTT+GGG 0.400110 1_1:+63940058 Msa0035660:CDS
AAAGATAAATGCACCCCTTA+AGG 0.402957 1_1:-63940234 None:intergenic
CTGATCAATGAATGGGCTAT+TGG 0.419393 1_1:+63939893 Msa0035660:CDS
ATGCATAAAAGCAGCTTAAC+CGG 0.422718 1_1:+63938905 Msa0035660:CDS
TGTGTCTTCTAATGCCTTGT+GGG 0.426560 1_1:-63939111 None:intergenic
TTGTGAGTAGTTGTGTTATC+AGG 0.430485 1_1:-63938734 None:intergenic
CTAGAGGAAACCATTGGATT+AGG 0.441923 1_1:+63939710 Msa0035660:CDS
ACATCTACCCTTGCTTTCCT+AGG 0.450885 1_1:-63939830 None:intergenic
TAGGATGTTGCATTTGATGT+TGG 0.451329 1_1:+63940057 Msa0035660:CDS
AATGCACCCCTTAAGGTAGA+AGG 0.452221 1_1:-63940227 None:intergenic
CACAAGTTCTGATCAATGAA+TGG 0.452681 1_1:+63939885 Msa0035660:CDS
ATGTGATGATGAGATGATTA+TGG 0.455610 1_1:-63938657 None:intergenic
ATTTAGTTTGTTGTTTGAGT+CGG 0.455901 1_1:+63940281 Msa0035660:three_prime_UTR
AATCATCTCATCATCACATA+TGG 0.458125 1_1:+63938661 Msa0035660:CDS
TGGATTAGGCAAAGCAATTG+AGG 0.468612 1_1:+63939724 Msa0035660:CDS
CTAGGAAGCAACATTGGAGC+TGG 0.474492 1_1:-63939812 None:intergenic
TGACATGCTAGACACCTTGT+TGG 0.476499 1_1:+63939228 Msa0035660:CDS
TTCCTAAGATGTTGCCAAAG+AGG 0.478700 1_1:-63938794 None:intergenic
TCCAACATCAACAGCTTCAC+CGG 0.481843 1_1:-63938924 None:intergenic
CTATTGGTAGAACAGACATA+TGG 0.484112 1_1:+63939909 Msa0035660:CDS
GGAACGGAGACATCGGCATA+TGG 0.485919 1_1:+63939623 Msa0035660:CDS
CAAGGAAGATAACCAAAAGA+TGG 0.490354 1_1:+63939258 Msa0035660:CDS
AAGCTTACACCGTTCGGTAG+TGG 0.505174 1_1:+63940001 Msa0035660:CDS
AATTGCTTTGCCTAATCCAA+TGG 0.507078 1_1:-63939720 None:intergenic
TAATAGGATCTTCTTGTGGC+GGG 0.510423 1_1:+63939602 Msa0035660:intron
TGACAATGCATGTCAACAAA+AGG 0.511959 1_1:-63938451 None:intergenic
TTGACTTCCATCAAGAGTCT+TGG 0.512046 1_1:-63938843 None:intergenic
ATACAAAGGCTTGAAAACTC+TGG 0.512609 1_1:-63940316 None:intergenic
ATTTCAGATATGGATTATGT+TGG 0.514460 1_1:+63938416 Msa0035660:CDS
GGGAAATGATCAGCAATGTT+TGG 0.514705 1_1:-63939070 None:intergenic
TTGGAAACTTGAAAATGGTA+TGG 0.515253 1_1:+63940102 Msa0035660:CDS
GGTTCTGAAATTGATGTCAA+AGG 0.515973 1_1:+63939968 Msa0035660:CDS
CTAACAGCAAGTGGTGAGCC+AGG 0.519026 1_1:-63940037 None:intergenic
TACAAAGGCTTGAAAACTCT+GGG 0.520983 1_1:-63940315 None:intergenic
GGATCTTCTTGTGGCGGGAA+CGG 0.521625 1_1:+63939607 Msa0035660:intron
GGAACCAAAGGACATGAACT+TGG 0.523493 1_1:+63940123 Msa0035660:CDS
CATCGGCATATGGATTAGAA+AGG 0.524755 1_1:+63939633 Msa0035660:CDS
TCTACTCTATTAAGTGCTGT+TGG 0.530508 1_1:+63939043 Msa0035660:CDS
GCTTTCCTAGGAAGCAACAT+TGG 0.531700 1_1:-63939818 None:intergenic
GTGTGTCTTCTAATGCCTTG+TGG 0.537078 1_1:-63939112 None:intergenic
ACAAGTTCTGATCAATGAAT+GGG 0.537372 1_1:+63939886 Msa0035660:CDS
CACCTTGTTGGACATTTCCA+AGG 0.540528 1_1:+63939240 Msa0035660:CDS
GCAGGTTACACAATTCCAAA+AGG 0.542022 1_1:+63939860 Msa0035660:CDS
TATTGGTAGAACAGACATAT+GGG 0.545658 1_1:+63939910 Msa0035660:CDS
GTTGCCAAAGAGGTGAAAAT+GGG 0.550649 1_1:-63938784 None:intergenic
ATCGGCATATGGATTAGAAA+GGG 0.554187 1_1:+63939634 Msa0035660:CDS
ACCGGTGAAGCTGTTGATGT+TGG 0.556936 1_1:+63938923 Msa0035660:CDS
AGGGTAGATGTGGAAATAGC+AGG 0.559602 1_1:+63939842 Msa0035660:CDS
AGTGGAAGACGTATATGTCC+TGG 0.560991 1_1:+63940019 Msa0035660:CDS
AAAGAACTAGAGGAAACCAT+TGG 0.567096 1_1:+63939704 Msa0035660:CDS
TAATCCATATCTGAAATCAT+CGG 0.572460 1_1:-63938410 None:intergenic
TGTTGCTTCCTAGGAAAGCA+AGG 0.573347 1_1:+63939822 Msa0035660:CDS
TAGGAAAGCAAGGGTAGATG+TGG 0.580642 1_1:+63939832 Msa0035660:CDS
TGCAACATCCTAACAGCAAG+TGG 0.583831 1_1:-63940046 None:intergenic
GGAAGCAACATTGGAGCTGG+AGG 0.596596 1_1:-63939809 None:intergenic
TGAAAATGGTATGGAACCAA+AGG 0.598027 1_1:+63940111 Msa0035660:CDS
AAAAGCAAAGAAAGAACTAG+AGG 0.598344 1_1:+63939694 Msa0035660:CDS
GTAACACCTTCTACCTTAAG+GGG 0.605371 1_1:+63940221 Msa0035660:three_prime_UTR
TTAATAGGATCTTCTTGTGG+CGG 0.607124 1_1:+63939601 Msa0035660:intron
ATGGGGATGTAAAATATGGT+TGG 0.611276 1_1:+63940337 Msa0035660:three_prime_UTR
TCAAACTACAAGCTTCCACC+AGG 0.616341 1_1:+63938512 Msa0035660:CDS
TGTGGCGGGAACGGAGACAT+CGG 0.617350 1_1:+63939616 Msa0035660:CDS
GAAGCAACATTGGAGCTGGA+GGG 0.632234 1_1:-63939808 None:intergenic
GCCAAAGAGGTGAAAATGGG+AGG 0.644896 1_1:-63938781 None:intergenic
TTCCTTGGAAATGTCCAACA+AGG 0.646999 1_1:-63939242 None:intergenic
GTTGCTTCCTAGGAAAGCAA+GGG 0.673834 1_1:+63939823 Msa0035660:CDS
TCCATATCTGAAATCATCGG+AGG 0.676078 1_1:-63938407 None:intergenic
TGAAGTAGTACGCCATCCAG+AGG 0.681999 1_1:+63939664 Msa0035660:CDS
ATACGTCTTCCACTACCGAA+CGG 0.707532 1_1:-63940010 None:intergenic
AAAGGCTTGAAAACTCTGGG+AGG 0.727391 1_1:-63940312 None:intergenic
TACACAGAGATTATTCAACG+AGG 0.754993 1_1:-63940201 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ACAAGATGAATAATTTTATA+TGG + chr1_1:63939432-63939451 Msa0035660:intron 15.0%
!!! AACTTAATATACTTTGTTTA+GGG - chr1_1:63940176-63940195 None:intergenic 15.0%
!!! TAACTTAATATACTTTGTTT+AGG - chr1_1:63940177-63940196 None:intergenic 15.0%
!!! ACAAGATGAATAATTTTATA+TGG + chr1_1:63939432-63939451 Msa0035660:intron 15.0%
!!! AACTTAATATACTTTGTTTA+GGG - chr1_1:63940176-63940195 None:intergenic 15.0%
!!! TAACTTAATATACTTTGTTT+AGG - chr1_1:63940177-63940196 None:intergenic 15.0%
!! ATTTGTAAAAAGAATCTCTT+TGG - chr1_1:63938687-63938706 None:intergenic 20.0%
!! TTTATATGGACACATATATT+TGG + chr1_1:63939446-63939465 Msa0035660:intron 20.0%
!!! GTCATTGTTGTATTTTTAAT+AGG + chr1_1:63939586-63939605 Msa0035660:intron 20.0%
!! ATTTGTAAAAAGAATCTCTT+TGG - chr1_1:63938687-63938706 None:intergenic 20.0%
!! TTTATATGGACACATATATT+TGG + chr1_1:63939446-63939465 Msa0035660:intron 20.0%
!!! GTCATTGTTGTATTTTTAAT+AGG + chr1_1:63939586-63939605 Msa0035660:intron 20.0%
!! TAATCCATATCTGAAATCAT+CGG - chr1_1:63938413-63938432 None:intergenic 25.0%
!! ATTTCAGATATGGATTATGT+TGG + chr1_1:63938416-63938435 Msa0035660:CDS 25.0%
! CATAACTTAATACGCATAAT+AGG - chr1_1:63938626-63938645 None:intergenic 25.0%
! AATTGTGATATGTTTCGTTA+GGG - chr1_1:63939364-63939383 None:intergenic 25.0%
! AAATTGTGATATGTTTCGTT+AGG - chr1_1:63939365-63939384 None:intergenic 25.0%
! TGTATCATTGCACAAATATA+AGG - chr1_1:63939413-63939432 None:intergenic 25.0%
!! TTTTTAATAGGATCTTCTTG+TGG + chr1_1:63939598-63939617 Msa0035660:intron 25.0%
!! TTTTCACCAGAAAGATTTTT+GGG + chr1_1:63939947-63939966 Msa0035660:CDS 25.0%
!!! ATTTTCAAGTTTCCAATCAA+AGG - chr1_1:63940098-63940117 None:intergenic 25.0%
! TTTGATTGGAAACTTGAAAA+TGG + chr1_1:63940097-63940116 Msa0035660:CDS 25.0%
!!! ATTTAGTTTGTTGTTTGAGT+CGG + chr1_1:63940281-63940300 Msa0035660:three_prime_UTR 25.0%
!! TAATCCATATCTGAAATCAT+CGG - chr1_1:63938413-63938432 None:intergenic 25.0%
!! ATTTCAGATATGGATTATGT+TGG + chr1_1:63938416-63938435 Msa0035660:CDS 25.0%
! CATAACTTAATACGCATAAT+AGG - chr1_1:63938626-63938645 None:intergenic 25.0%
! AATTGTGATATGTTTCGTTA+GGG - chr1_1:63939364-63939383 None:intergenic 25.0%
! AAATTGTGATATGTTTCGTT+AGG - chr1_1:63939365-63939384 None:intergenic 25.0%
! TGTATCATTGCACAAATATA+AGG - chr1_1:63939413-63939432 None:intergenic 25.0%
!! TTTTTAATAGGATCTTCTTG+TGG + chr1_1:63939598-63939617 Msa0035660:intron 25.0%
!! TTTTCACCAGAAAGATTTTT+GGG + chr1_1:63939947-63939966 Msa0035660:CDS 25.0%
!!! ATTTTCAAGTTTCCAATCAA+AGG - chr1_1:63940098-63940117 None:intergenic 25.0%
! TTTGATTGGAAACTTGAAAA+TGG + chr1_1:63940097-63940116 Msa0035660:CDS 25.0%
!!! ATTTAGTTTGTTGTTTGAGT+CGG + chr1_1:63940281-63940300 Msa0035660:three_prime_UTR 25.0%
! GACATGATAGTGAAAAAAGA+AGG - chr1_1:63938539-63938558 None:intergenic 30.0%
!! GCAAAACTTGCTAAGTTATA+TGG + chr1_1:63938599-63938618 Msa0035660:CDS 30.0%
! ATGTGATGATGAGATGATTA+TGG - chr1_1:63938660-63938679 None:intergenic 30.0%
AATCATCTCATCATCACATA+TGG + chr1_1:63938661-63938680 Msa0035660:CDS 30.0%
!! TTCAAAAGTGTTCTATGCTT+TGG + chr1_1:63939147-63939166 Msa0035660:CDS 30.0%
! TCTGTCTTTTATCCATCTTT+TGG - chr1_1:63939273-63939292 None:intergenic 30.0%
! ATATATTTGGACACGTCTTT+TGG + chr1_1:63939459-63939478 Msa0035660:intron 30.0%
GTGTGGACACATTATATATT+TGG - chr1_1:63939533-63939552 None:intergenic 30.0%
AAAAGCAAAGAAAGAACTAG+AGG + chr1_1:63939694-63939713 Msa0035660:CDS 30.0%
TTGAGGAATCAGATATTGAT+AGG + chr1_1:63939741-63939760 Msa0035660:CDS 30.0%
TTTATCACTGCATTCAAGTA+TGG - chr1_1:63939770-63939789 None:intergenic 30.0%
! ACAAGTTCTGATCAATGAAT+GGG + chr1_1:63939886-63939905 Msa0035660:CDS 30.0%
TATTGGTAGAACAGACATAT+GGG + chr1_1:63939910-63939929 Msa0035660:CDS 30.0%
! GTTTTCACCAGAAAGATTTT+TGG + chr1_1:63939946-63939965 Msa0035660:CDS 30.0%
TTGGAAACTTGAAAATGGTA+TGG + chr1_1:63940102-63940121 Msa0035660:CDS 30.0%
! TATTTTACATCCCCATACAA+AGG - chr1_1:63940333-63940352 None:intergenic 30.0%
TTGTATGGGGATGTAAAATA+TGG + chr1_1:63940333-63940352 Msa0035660:three_prime_UTR 30.0%
! GACATGATAGTGAAAAAAGA+AGG - chr1_1:63938539-63938558 None:intergenic 30.0%
!! GCAAAACTTGCTAAGTTATA+TGG + chr1_1:63938599-63938618 Msa0035660:CDS 30.0%
! ATGTGATGATGAGATGATTA+TGG - chr1_1:63938660-63938679 None:intergenic 30.0%
AATCATCTCATCATCACATA+TGG + chr1_1:63938661-63938680 Msa0035660:CDS 30.0%
!! TTCAAAAGTGTTCTATGCTT+TGG + chr1_1:63939147-63939166 Msa0035660:CDS 30.0%
! TCTGTCTTTTATCCATCTTT+TGG - chr1_1:63939273-63939292 None:intergenic 30.0%
! ATATATTTGGACACGTCTTT+TGG + chr1_1:63939459-63939478 Msa0035660:intron 30.0%
GTGTGGACACATTATATATT+TGG - chr1_1:63939533-63939552 None:intergenic 30.0%
AAAAGCAAAGAAAGAACTAG+AGG + chr1_1:63939694-63939713 Msa0035660:CDS 30.0%
TTGAGGAATCAGATATTGAT+AGG + chr1_1:63939741-63939760 Msa0035660:CDS 30.0%
TTTATCACTGCATTCAAGTA+TGG - chr1_1:63939770-63939789 None:intergenic 30.0%
! ACAAGTTCTGATCAATGAAT+GGG + chr1_1:63939886-63939905 Msa0035660:CDS 30.0%
TATTGGTAGAACAGACATAT+GGG + chr1_1:63939910-63939929 Msa0035660:CDS 30.0%
! GTTTTCACCAGAAAGATTTT+TGG + chr1_1:63939946-63939965 Msa0035660:CDS 30.0%
TTGGAAACTTGAAAATGGTA+TGG + chr1_1:63940102-63940121 Msa0035660:CDS 30.0%
! TATTTTACATCCCCATACAA+AGG - chr1_1:63940333-63940352 None:intergenic 30.0%
TTGTATGGGGATGTAAAATA+TGG + chr1_1:63940333-63940352 Msa0035660:three_prime_UTR 30.0%
TGACAATGCATGTCAACAAA+AGG - chr1_1:63938454-63938473 None:intergenic 35.0%
TGCATTGTCATGTTCTTCAT+TGG + chr1_1:63938464-63938483 Msa0035660:CDS 35.0%
ATAGTGAAAAAAGAAGGTCC+TGG - chr1_1:63938533-63938552 None:intergenic 35.0%
!! AGTTTTGCAAGTGTTTGTTG+TGG - chr1_1:63938587-63938606 None:intergenic 35.0%
TTGTGAGTAGTTGTGTTATC+AGG - chr1_1:63938737-63938756 None:intergenic 35.0%
ATGCATAAAAGCAGCTTAAC+CGG + chr1_1:63938905-63938924 Msa0035660:CDS 35.0%
! TCTACTCTATTAAGTGCTGT+TGG + chr1_1:63939043-63939062 Msa0035660:CDS 35.0%
GGTCAAAAATCTTCAACACT+GGG - chr1_1:63939093-63939112 None:intergenic 35.0%
! TTGAAGATTTTTGACCCACA+AGG + chr1_1:63939097-63939116 Msa0035660:CDS 35.0%
!! CATCTTTTGGTTATCTTCCT+TGG - chr1_1:63939260-63939279 None:intergenic 35.0%
CAAGGAAGATAACCAAAAGA+TGG + chr1_1:63939258-63939277 Msa0035660:CDS 35.0%
TTAATAGGATCTTCTTGTGG+CGG + chr1_1:63939601-63939620 Msa0035660:intron 35.0%
!! ATCGGCATATGGATTAGAAA+GGG + chr1_1:63939634-63939653 Msa0035660:CDS 35.0%
!! TTTGCTTTTGACATAACCTC+TGG - chr1_1:63939683-63939702 None:intergenic 35.0%
AAAGAACTAGAGGAAACCAT+TGG + chr1_1:63939704-63939723 Msa0035660:CDS 35.0%
AATTGCTTTGCCTAATCCAA+TGG - chr1_1:63939723-63939742 None:intergenic 35.0%
! CACAAGTTCTGATCAATGAA+TGG + chr1_1:63939885-63939904 Msa0035660:CDS 35.0%
CTATTGGTAGAACAGACATA+TGG + chr1_1:63939909-63939928 Msa0035660:CDS 35.0%
TCAGAACCCAAAAATCTTTC+TGG - chr1_1:63939956-63939975 None:intergenic 35.0%
!! GGTTCTGAAATTGATGTCAA+AGG + chr1_1:63939968-63939987 Msa0035660:CDS 35.0%
! CATTTTAAGCTTACACCGTT+CGG + chr1_1:63939995-63940014 Msa0035660:CDS 35.0%
TAGGATGTTGCATTTGATGT+TGG + chr1_1:63940057-63940076 Msa0035660:CDS 35.0%
AGGATGTTGCATTTGATGTT+GGG + chr1_1:63940058-63940077 Msa0035660:CDS 35.0%
CATTGATCAACTCCTTTGAT+TGG + chr1_1:63940083-63940102 Msa0035660:CDS 35.0%
TGAAAATGGTATGGAACCAA+AGG + chr1_1:63940111-63940130 Msa0035660:CDS 35.0%
! TATACTTTGTTTAGGGCAAC+TGG - chr1_1:63940169-63940188 None:intergenic 35.0%
TACACAGAGATTATTCAACG+AGG - chr1_1:63940204-63940223 None:intergenic 35.0%
TGTAACACCTTCTACCTTAA+GGG + chr1_1:63940220-63940239 Msa0035660:three_prime_UTR 35.0%
AAAGATAAATGCACCCCTTA+AGG - chr1_1:63940237-63940256 None:intergenic 35.0%
TACAAAGGCTTGAAAACTCT+GGG - chr1_1:63940318-63940337 None:intergenic 35.0%
ATACAAAGGCTTGAAAACTC+TGG - chr1_1:63940319-63940338 None:intergenic 35.0%
!! AGAGTTTTCAAGCCTTTGTA+TGG + chr1_1:63940318-63940337 Msa0035660:three_prime_UTR 35.0%
!! GAGTTTTCAAGCCTTTGTAT+GGG + chr1_1:63940319-63940338 Msa0035660:three_prime_UTR 35.0%
!! AGTTTTCAAGCCTTTGTATG+GGG + chr1_1:63940320-63940339 Msa0035660:three_prime_UTR 35.0%
ATGGGGATGTAAAATATGGT+TGG + chr1_1:63940337-63940356 Msa0035660:three_prime_UTR 35.0%
TGACAATGCATGTCAACAAA+AGG - chr1_1:63938454-63938473 None:intergenic 35.0%
TGCATTGTCATGTTCTTCAT+TGG + chr1_1:63938464-63938483 Msa0035660:CDS 35.0%
ATAGTGAAAAAAGAAGGTCC+TGG - chr1_1:63938533-63938552 None:intergenic 35.0%
!! AGTTTTGCAAGTGTTTGTTG+TGG - chr1_1:63938587-63938606 None:intergenic 35.0%
TTGTGAGTAGTTGTGTTATC+AGG - chr1_1:63938737-63938756 None:intergenic 35.0%
ATGCATAAAAGCAGCTTAAC+CGG + chr1_1:63938905-63938924 Msa0035660:CDS 35.0%
! TCTACTCTATTAAGTGCTGT+TGG + chr1_1:63939043-63939062 Msa0035660:CDS 35.0%
GGTCAAAAATCTTCAACACT+GGG - chr1_1:63939093-63939112 None:intergenic 35.0%
! TTGAAGATTTTTGACCCACA+AGG + chr1_1:63939097-63939116 Msa0035660:CDS 35.0%
!! CATCTTTTGGTTATCTTCCT+TGG - chr1_1:63939260-63939279 None:intergenic 35.0%
CAAGGAAGATAACCAAAAGA+TGG + chr1_1:63939258-63939277 Msa0035660:CDS 35.0%
TTAATAGGATCTTCTTGTGG+CGG + chr1_1:63939601-63939620 Msa0035660:intron 35.0%
!! ATCGGCATATGGATTAGAAA+GGG + chr1_1:63939634-63939653 Msa0035660:CDS 35.0%
!! TTTGCTTTTGACATAACCTC+TGG - chr1_1:63939683-63939702 None:intergenic 35.0%
AAAGAACTAGAGGAAACCAT+TGG + chr1_1:63939704-63939723 Msa0035660:CDS 35.0%
AATTGCTTTGCCTAATCCAA+TGG - chr1_1:63939723-63939742 None:intergenic 35.0%
! CACAAGTTCTGATCAATGAA+TGG + chr1_1:63939885-63939904 Msa0035660:CDS 35.0%
CTATTGGTAGAACAGACATA+TGG + chr1_1:63939909-63939928 Msa0035660:CDS 35.0%
TCAGAACCCAAAAATCTTTC+TGG - chr1_1:63939956-63939975 None:intergenic 35.0%
!! GGTTCTGAAATTGATGTCAA+AGG + chr1_1:63939968-63939987 Msa0035660:CDS 35.0%
! CATTTTAAGCTTACACCGTT+CGG + chr1_1:63939995-63940014 Msa0035660:CDS 35.0%
TAGGATGTTGCATTTGATGT+TGG + chr1_1:63940057-63940076 Msa0035660:CDS 35.0%
AGGATGTTGCATTTGATGTT+GGG + chr1_1:63940058-63940077 Msa0035660:CDS 35.0%
CATTGATCAACTCCTTTGAT+TGG + chr1_1:63940083-63940102 Msa0035660:CDS 35.0%
TGAAAATGGTATGGAACCAA+AGG + chr1_1:63940111-63940130 Msa0035660:CDS 35.0%
! TATACTTTGTTTAGGGCAAC+TGG - chr1_1:63940169-63940188 None:intergenic 35.0%
TACACAGAGATTATTCAACG+AGG - chr1_1:63940204-63940223 None:intergenic 35.0%
TGTAACACCTTCTACCTTAA+GGG + chr1_1:63940220-63940239 Msa0035660:three_prime_UTR 35.0%
AAAGATAAATGCACCCCTTA+AGG - chr1_1:63940237-63940256 None:intergenic 35.0%
TACAAAGGCTTGAAAACTCT+GGG - chr1_1:63940318-63940337 None:intergenic 35.0%
ATACAAAGGCTTGAAAACTC+TGG - chr1_1:63940319-63940338 None:intergenic 35.0%
!! AGAGTTTTCAAGCCTTTGTA+TGG + chr1_1:63940318-63940337 Msa0035660:three_prime_UTR 35.0%
!! GAGTTTTCAAGCCTTTGTAT+GGG + chr1_1:63940319-63940338 Msa0035660:three_prime_UTR 35.0%
!! AGTTTTCAAGCCTTTGTATG+GGG + chr1_1:63940320-63940339 Msa0035660:three_prime_UTR 35.0%
ATGGGGATGTAAAATATGGT+TGG + chr1_1:63940337-63940356 Msa0035660:three_prime_UTR 35.0%
TCCTCCGATGATTTCAGATA+TGG + chr1_1:63938406-63938425 Msa0035660:CDS 40.0%
! TCCATATCTGAAATCATCGG+AGG - chr1_1:63938410-63938429 None:intergenic 40.0%
GTTGCCAAAGAGGTGAAAAT+GGG - chr1_1:63938787-63938806 None:intergenic 40.0%
TGTTGCCAAAGAGGTGAAAA+TGG - chr1_1:63938788-63938807 None:intergenic 40.0%
TTCCTAAGATGTTGCCAAAG+AGG - chr1_1:63938797-63938816 None:intergenic 40.0%
TTCTCTACCAAGACTCTTGA+TGG + chr1_1:63938836-63938855 Msa0035660:CDS 40.0%
TTGACTTCCATCAAGAGTCT+TGG - chr1_1:63938846-63938865 None:intergenic 40.0%
GGGAAATGATCAGCAATGTT+TGG - chr1_1:63939073-63939092 None:intergenic 40.0%
GGGTCAAAAATCTTCAACAC+TGG - chr1_1:63939094-63939113 None:intergenic 40.0%
TGTGTCTTCTAATGCCTTGT+GGG - chr1_1:63939114-63939133 None:intergenic 40.0%
TTCCTTGGAAATGTCCAACA+AGG - chr1_1:63939245-63939264 None:intergenic 40.0%
TCATGCGAGCAATTATTGTG+TGG - chr1_1:63939550-63939569 None:intergenic 40.0%
TAATAGGATCTTCTTGTGGC+GGG + chr1_1:63939602-63939621 Msa0035660:intron 40.0%
!! CATCGGCATATGGATTAGAA+AGG + chr1_1:63939633-63939652 Msa0035660:CDS 40.0%
! CTTTTGACATAACCTCTGGA+TGG - chr1_1:63939679-63939698 None:intergenic 40.0%
CTAGAGGAAACCATTGGATT+AGG + chr1_1:63939710-63939729 Msa0035660:CDS 40.0%
! TGGATTAGGCAAAGCAATTG+AGG + chr1_1:63939724-63939743 Msa0035660:CDS 40.0%
GCAGGTTACACAATTCCAAA+AGG + chr1_1:63939860-63939879 Msa0035660:CDS 40.0%
! ATCAGAACTTGTGCACCTTT+TGG - chr1_1:63939878-63939897 None:intergenic 40.0%
!! CTGATCAATGAATGGGCTAT+TGG + chr1_1:63939893-63939912 Msa0035660:CDS 40.0%
TTGTCCAAGTTCATGTCCTT+TGG - chr1_1:63940130-63940149 None:intergenic 40.0%
GTGTAACACCTTCTACCTTA+AGG + chr1_1:63940219-63940238 Msa0035660:three_prime_UTR 40.0%
GTAACACCTTCTACCTTAAG+GGG + chr1_1:63940221-63940240 Msa0035660:three_prime_UTR 40.0%
TCCTCCGATGATTTCAGATA+TGG + chr1_1:63938406-63938425 Msa0035660:CDS 40.0%
! TCCATATCTGAAATCATCGG+AGG - chr1_1:63938410-63938429 None:intergenic 40.0%
GTTGCCAAAGAGGTGAAAAT+GGG - chr1_1:63938787-63938806 None:intergenic 40.0%
TGTTGCCAAAGAGGTGAAAA+TGG - chr1_1:63938788-63938807 None:intergenic 40.0%
TTCCTAAGATGTTGCCAAAG+AGG - chr1_1:63938797-63938816 None:intergenic 40.0%
TTCTCTACCAAGACTCTTGA+TGG + chr1_1:63938836-63938855 Msa0035660:CDS 40.0%
TTGACTTCCATCAAGAGTCT+TGG - chr1_1:63938846-63938865 None:intergenic 40.0%
GGGAAATGATCAGCAATGTT+TGG - chr1_1:63939073-63939092 None:intergenic 40.0%
GGGTCAAAAATCTTCAACAC+TGG - chr1_1:63939094-63939113 None:intergenic 40.0%
TGTGTCTTCTAATGCCTTGT+GGG - chr1_1:63939114-63939133 None:intergenic 40.0%
TTCCTTGGAAATGTCCAACA+AGG - chr1_1:63939245-63939264 None:intergenic 40.0%
TCATGCGAGCAATTATTGTG+TGG - chr1_1:63939550-63939569 None:intergenic 40.0%
TAATAGGATCTTCTTGTGGC+GGG + chr1_1:63939602-63939621 Msa0035660:intron 40.0%
!! CATCGGCATATGGATTAGAA+AGG + chr1_1:63939633-63939652 Msa0035660:CDS 40.0%
! CTTTTGACATAACCTCTGGA+TGG - chr1_1:63939679-63939698 None:intergenic 40.0%
CTAGAGGAAACCATTGGATT+AGG + chr1_1:63939710-63939729 Msa0035660:CDS 40.0%
! TGGATTAGGCAAAGCAATTG+AGG + chr1_1:63939724-63939743 Msa0035660:CDS 40.0%
GCAGGTTACACAATTCCAAA+AGG + chr1_1:63939860-63939879 Msa0035660:CDS 40.0%
! ATCAGAACTTGTGCACCTTT+TGG - chr1_1:63939878-63939897 None:intergenic 40.0%
!! CTGATCAATGAATGGGCTAT+TGG + chr1_1:63939893-63939912 Msa0035660:CDS 40.0%
TTGTCCAAGTTCATGTCCTT+TGG - chr1_1:63940130-63940149 None:intergenic 40.0%
GTGTAACACCTTCTACCTTA+AGG + chr1_1:63940219-63940238 Msa0035660:three_prime_UTR 40.0%
GTAACACCTTCTACCTTAAG+GGG + chr1_1:63940221-63940240 Msa0035660:three_prime_UTR 40.0%
TCAAACTACAAGCTTCCACC+AGG + chr1_1:63938512-63938531 Msa0035660:CDS 45.0%
GTGAAAAAAGAAGGTCCTGG+TGG - chr1_1:63938530-63938549 None:intergenic 45.0%
! TCCTCCCATTTTCACCTCTT+TGG + chr1_1:63938780-63938799 Msa0035660:CDS 45.0%
CACCTCTTTGGCAACATCTT+AGG + chr1_1:63938792-63938811 Msa0035660:CDS 45.0%
TCCAACATCAACAGCTTCAC+CGG - chr1_1:63938927-63938946 None:intergenic 45.0%
! TGTTGGAAGAGCTGCTTTCA+AGG + chr1_1:63938940-63938959 Msa0035660:CDS 45.0%
GTGTGTCTTCTAATGCCTTG+TGG - chr1_1:63939115-63939134 None:intergenic 45.0%
TGACATGCTAGACACCTTGT+TGG + chr1_1:63939228-63939247 Msa0035660:CDS 45.0%
CACCTTGTTGGACATTTCCA+AGG + chr1_1:63939240-63939259 Msa0035660:CDS 45.0%
GCTTTCCTAGGAAGCAACAT+TGG - chr1_1:63939821-63939840 None:intergenic 45.0%
! TGTTGCTTCCTAGGAAAGCA+AGG + chr1_1:63939822-63939841 Msa0035660:CDS 45.0%
GTTGCTTCCTAGGAAAGCAA+GGG + chr1_1:63939823-63939842 Msa0035660:CDS 45.0%
ACATCTACCCTTGCTTTCCT+AGG - chr1_1:63939833-63939852 None:intergenic 45.0%
TAGGAAAGCAAGGGTAGATG+TGG + chr1_1:63939832-63939851 Msa0035660:CDS 45.0%
AGGGTAGATGTGGAAATAGC+AGG + chr1_1:63939842-63939861 Msa0035660:CDS 45.0%
ATACGTCTTCCACTACCGAA+CGG - chr1_1:63940013-63940032 None:intergenic 45.0%
AGTGGAAGACGTATATGTCC+TGG + chr1_1:63940019-63940038 Msa0035660:CDS 45.0%
TGCAACATCCTAACAGCAAG+TGG - chr1_1:63940049-63940068 None:intergenic 45.0%
GGAACCAAAGGACATGAACT+TGG + chr1_1:63940123-63940142 Msa0035660:CDS 45.0%
AATGCACCCCTTAAGGTAGA+AGG - chr1_1:63940230-63940249 None:intergenic 45.0%
AAAGGCTTGAAAACTCTGGG+AGG - chr1_1:63940315-63940334 None:intergenic 45.0%
TCAAACTACAAGCTTCCACC+AGG + chr1_1:63938512-63938531 Msa0035660:CDS 45.0%
GTGAAAAAAGAAGGTCCTGG+TGG - chr1_1:63938530-63938549 None:intergenic 45.0%
! TCCTCCCATTTTCACCTCTT+TGG + chr1_1:63938780-63938799 Msa0035660:CDS 45.0%
CACCTCTTTGGCAACATCTT+AGG + chr1_1:63938792-63938811 Msa0035660:CDS 45.0%
TCCAACATCAACAGCTTCAC+CGG - chr1_1:63938927-63938946 None:intergenic 45.0%
! TGTTGGAAGAGCTGCTTTCA+AGG + chr1_1:63938940-63938959 Msa0035660:CDS 45.0%
GTGTGTCTTCTAATGCCTTG+TGG - chr1_1:63939115-63939134 None:intergenic 45.0%
TGACATGCTAGACACCTTGT+TGG + chr1_1:63939228-63939247 Msa0035660:CDS 45.0%
CACCTTGTTGGACATTTCCA+AGG + chr1_1:63939240-63939259 Msa0035660:CDS 45.0%
GCTTTCCTAGGAAGCAACAT+TGG - chr1_1:63939821-63939840 None:intergenic 45.0%
! TGTTGCTTCCTAGGAAAGCA+AGG + chr1_1:63939822-63939841 Msa0035660:CDS 45.0%
GTTGCTTCCTAGGAAAGCAA+GGG + chr1_1:63939823-63939842 Msa0035660:CDS 45.0%
ACATCTACCCTTGCTTTCCT+AGG - chr1_1:63939833-63939852 None:intergenic 45.0%
TAGGAAAGCAAGGGTAGATG+TGG + chr1_1:63939832-63939851 Msa0035660:CDS 45.0%
AGGGTAGATGTGGAAATAGC+AGG + chr1_1:63939842-63939861 Msa0035660:CDS 45.0%
ATACGTCTTCCACTACCGAA+CGG - chr1_1:63940013-63940032 None:intergenic 45.0%
AGTGGAAGACGTATATGTCC+TGG + chr1_1:63940019-63940038 Msa0035660:CDS 45.0%
TGCAACATCCTAACAGCAAG+TGG - chr1_1:63940049-63940068 None:intergenic 45.0%
GGAACCAAAGGACATGAACT+TGG + chr1_1:63940123-63940142 Msa0035660:CDS 45.0%
AATGCACCCCTTAAGGTAGA+AGG - chr1_1:63940230-63940249 None:intergenic 45.0%
AAAGGCTTGAAAACTCTGGG+AGG - chr1_1:63940315-63940334 None:intergenic 45.0%
!! TTCTTAAATTATTATATATT+TGG - chr1_1:63939486-63939505 None:intergenic 5.0%
!! TTCTTAAATTATTATATATT+TGG - chr1_1:63939486-63939505 None:intergenic 5.0%
GCCAAAGAGGTGAAAATGGG+AGG - chr1_1:63938784-63938803 None:intergenic 50.0%
ACCGGTGAAGCTGTTGATGT+TGG + chr1_1:63938923-63938942 Msa0035660:CDS 50.0%
TGAAGTAGTACGCCATCCAG+AGG + chr1_1:63939664-63939683 Msa0035660:CDS 50.0%
GAAGCAACATTGGAGCTGGA+GGG - chr1_1:63939811-63939830 None:intergenic 50.0%
CTAGGAAGCAACATTGGAGC+TGG - chr1_1:63939815-63939834 None:intergenic 50.0%
! CAGCTCCAATGTTGCTTCCT+AGG + chr1_1:63939813-63939832 Msa0035660:CDS 50.0%
AAGCTTACACCGTTCGGTAG+TGG + chr1_1:63940001-63940020 Msa0035660:CDS 50.0%
GCCAAAGAGGTGAAAATGGG+AGG - chr1_1:63938784-63938803 None:intergenic 50.0%
ACCGGTGAAGCTGTTGATGT+TGG + chr1_1:63938923-63938942 Msa0035660:CDS 50.0%
TGAAGTAGTACGCCATCCAG+AGG + chr1_1:63939664-63939683 Msa0035660:CDS 50.0%
GAAGCAACATTGGAGCTGGA+GGG - chr1_1:63939811-63939830 None:intergenic 50.0%
CTAGGAAGCAACATTGGAGC+TGG - chr1_1:63939815-63939834 None:intergenic 50.0%
! CAGCTCCAATGTTGCTTCCT+AGG + chr1_1:63939813-63939832 Msa0035660:CDS 50.0%
AAGCTTACACCGTTCGGTAG+TGG + chr1_1:63940001-63940020 Msa0035660:CDS 50.0%
! GGATCTTCTTGTGGCGGGAA+CGG + chr1_1:63939607-63939626 Msa0035660:intron 55.0%
GGAACGGAGACATCGGCATA+TGG + chr1_1:63939623-63939642 Msa0035660:CDS 55.0%
GGAAGCAACATTGGAGCTGG+AGG - chr1_1:63939812-63939831 None:intergenic 55.0%
CTAACAGCAAGTGGTGAGCC+AGG - chr1_1:63940040-63940059 None:intergenic 55.0%
!! CTGGCTCACCACTTGCTGTT+AGG + chr1_1:63940038-63940057 Msa0035660:CDS 55.0%
! GGATCTTCTTGTGGCGGGAA+CGG + chr1_1:63939607-63939626 Msa0035660:intron 55.0%
GGAACGGAGACATCGGCATA+TGG + chr1_1:63939623-63939642 Msa0035660:CDS 55.0%
GGAAGCAACATTGGAGCTGG+AGG - chr1_1:63939812-63939831 None:intergenic 55.0%
CTAACAGCAAGTGGTGAGCC+AGG - chr1_1:63940040-63940059 None:intergenic 55.0%
!! CTGGCTCACCACTTGCTGTT+AGG + chr1_1:63940038-63940057 Msa0035660:CDS 55.0%
! TGTGGCGGGAACGGAGACAT+CGG + chr1_1:63939616-63939635 Msa0035660:CDS 60.0%
! TGTGGCGGGAACGGAGACAT+CGG + chr1_1:63939616-63939635 Msa0035660:CDS 60.0%
Chromosome Type Strat End Strand Name
chr1_1 gene 63938380 63940412 63938380 ID=Msa0035660;Name=Msa0035660
chr1_1 mRNA 63938380 63940412 63938380 ID=Msa0035660-mRNA-1;Parent=Msa0035660;Name=Msa0035660-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|1|0.5|1|1|1|2|220|504
chr1_1 exon 63938380 63939309 63938380 ID=Msa0035660-mRNA-1:exon:20418;Parent=Msa0035660-mRNA-1
chr1_1 exon 63939608 63940412 63939608 ID=Msa0035660-mRNA-1:exon:20419;Parent=Msa0035660-mRNA-1
chr1_1 CDS 63938380 63939309 63938380 ID=Msa0035660-mRNA-1:cds;Parent=Msa0035660-mRNA-1
chr1_1 CDS 63939608 63940192 63939608 ID=Msa0035660-mRNA-1:cds;Parent=Msa0035660-mRNA-1
chr1_1 three_prime_UTR 63940193 63940412 63940193 ID=Msa0035660-mRNA-1:three_prime_utr;Parent=Msa0035660-mRNA-1
Gene Sequence

>Msa0035660

ATGCATCAAATTAATAAAGAACTTGTTCCTCCGATGATTTCAGATATGGATTATGTTGGTAGTGTTATGCTCCTTTTGTTGACATGCATTGTCATGTTCTTCATTGGTTTACTACATGCAAGAAACAAAAAATCAAACTACAAGCTTCCACCAGGACCTTCTTTTTTCACTATCATGTCACATGTTGTTGAATTGTACAACAAGCCACAACAAACACTTGCAAAACTTGCTAAGTTATATGGTCCTATTATGCGTATTAAGTTATGCACAGAAACTACCATAATCATCTCATCATCACATATGGCCAAAGAGATTCTTTTTACAAATGATTCATTGTTCACTGATAGATCTGTTCCTGATAACACAACTACTCACAATCACAACAATTTTAGCTTAGTTTTCCTCCCATTTTCACCTCTTTGGCAACATCTTAGGAAAATATGTCATAATAATTTATTCTCTACCAAGACTCTTGATGGAAGTCAAGAACTTAGACGTATGAAATTAAAAGATCTTCTCAATGATATGCATAAAAGCAGCTTAACCGGTGAAGCTGTTGATGTTGGAAGAGCTGCTTTCAAGGCTTGCATTAATTTTTTGTCATACACTTTTGTGTCTCAAGATTTTGTTGAGAATTTAGATGATGAATATAAAAATATAGTGTCTACTCTATTAAGTGCTGTTGGAACACCAAACATTGCTGATCATTTCCCAGTGTTGAAGATTTTTGACCCACAAGGCATTAGAAGACACACTACTCTTTATGTTTCAAAAGTGTTCTATGCTTTGGATATCATAATTGACAAACGAATGAAGATGAGACAAAGTGAACAATATGTCTCAAAAAATGACATGCTAGACACCTTGTTGGACATTTCCAAGGAAGATAACCAAAAGATGGATAAAAGACAGATTAAGCATCTACTACTTGATCTTCTTGTGGCGGGAACGGAGACATCGGCATATGGATTAGAAAGGGCAATGAGTGAAGTAGTACGCCATCCAGAGGTTATGTCAAAAGCAAAGAAAGAACTAGAGGAAACCATTGGATTAGGCAAAGCAATTGAGGAATCAGATATTGATAGGCTTCCATACTTGAATGCAGTGATAAAAGAGAGTTTACGTTTACACCCTCCAGCTCCAATGTTGCTTCCTAGGAAAGCAAGGGTAGATGTGGAAATAGCAGGTTACACAATTCCAAAAGGTGCACAAGTTCTGATCAATGAATGGGCTATTGGTAGAACAGACATATGGGATGATGCTCATTTGTTTTCACCAGAAAGATTTTTGGGTTCTGAAATTGATGTCAAAGGTCGACATTTTAAGCTTACACCGTTCGGTAGTGGAAGACGTATATGTCCTGGCTCACCACTTGCTGTTAGGATGTTGCATTTGATGTTGGGATCATTGATCAACTCCTTTGATTGGAAACTTGAAAATGGTATGGAACCAAAGGACATGAACTTGGACAAACAACTAAGAGCTATTCCAGTTGCCCTAAACAAAGTATATTAA
Protein sequence

>Msa0035660

MHQINKELVPPMISDMDYVGSVMLLLLTCIVMFFIGLLHARNKKSNYKLPPGPSFFTIMSHVVELYNKPQQTLAKLAKLYGPIMRIKLCTETTIIISSSHMAKEILFTNDSLFTDRSVPDNTTTHNHNNFSLVFLPFSPLWQHLRKICHNNLFSTKTLDGSQELRRMKLKDLLNDMHKSSLTGEAVDVGRAAFKACINFLSYTFVSQDFVENLDDEYKNIVSTLLSAVGTPNIADHFPVLKIFDPQGIRRHTTLYVSKVFYALDIIIDKRMKMRQSEQYVSKNDMLDTLLDISKEDNQKMDKRQIKHLLLDLLVAGTETSAYGLERAMSEVVRHPEVMSKAKKELEETIGLGKAIEESDIDRLPYLNAVIKESLRLHPPAPMLLPRKARVDVEIAGYTIPKGAQVLINEWAIGRTDIWDDAHLFSPERFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENGMEPKDMNLDKQLRAIPVALNKVY*