AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0176170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0176170 MtrunA17_Chr1g0197881 96.327 490 17 1 5 494 1 489 0.0 979
Msa0176170 MtrunA17_Chr1g0197851 95.902 488 20 0 5 492 1 488 0.0 976
Msa0176170 MtrunA17_Chr1g0197891 95.492 488 22 0 5 492 1 488 0.0 966
Msa0176170 MtrunA17_Chr1g0197871 88.660 485 55 0 5 489 1 485 0.0 896
Msa0176170 MtrunA17_Chr2g0314731 59.470 491 191 4 5 492 1 486 0.0 603
Msa0176170 MtrunA17_Chr2g0314721 59.548 487 190 3 7 490 13 495 0.0 599
Msa0176170 MtrunA17_Chr1g0176831 56.998 493 204 4 1 490 27 514 0.0 578
Msa0176170 MtrunA17_Chr5g0395321 53.799 487 215 4 2 485 4 483 0.0 546
Msa0176170 MtrunA17_Chr1g0205361 52.218 496 223 4 5 487 1 495 0.0 537
Msa0176170 MtrunA17_Chr5g0395331 52.731 476 208 3 33 491 32 507 0.0 537
Msa0176170 MtrunA17_Chr1g0160851 52.000 500 226 4 5 491 1 499 0.0 536
Msa0176170 MtrunA17_Chr8g0356001 50.988 506 227 6 5 489 1 506 7.58e-179 511
Msa0176170 MtrunA17_Chr1g0205371 51.400 500 228 5 5 490 1 499 3.72e-175 501
Msa0176170 MtrunA17_Chr5g0395381 49.405 504 209 6 2 491 4 475 2.78e-174 498
Msa0176170 MtrunA17_Chr8g0355961 50.988 506 227 5 5 489 1 506 8.25e-172 493
Msa0176170 MtrunA17_Chr4g0039901 49.170 482 241 3 5 482 1 482 6.40e-171 491
Msa0176170 MtrunA17_Chr1g0164211 51.893 449 212 3 37 482 30 477 6.67e-165 475
Msa0176170 MtrunA17_Chr7g0246221 43.802 484 258 6 11 482 5 486 2.33e-146 428
Msa0176170 MtrunA17_Chr7g0246151 42.177 441 246 5 50 482 46 485 4.60e-126 377
Msa0176170 MtrunA17_Chr7g0246131 41.996 481 268 5 11 482 9 487 1.74e-125 375
Msa0176170 MtrunA17_Chr7g0246121 41.818 440 249 4 49 482 45 483 7.85e-122 365
Msa0176170 MtrunA17_Chr7g0246181 42.630 441 246 3 49 482 45 485 7.94e-122 365
Msa0176170 MtrunA17_Chr1g0160861 54.054 333 139 4 172 491 9 340 9.69e-122 360
Msa0176170 MtrunA17_Chr1g0200961 40.121 496 275 6 12 489 6 497 5.59e-115 348
Msa0176170 MtrunA17_Chr7g0265611 34.947 475 295 7 20 482 28 500 2.83e-101 313
Msa0176170 MtrunA17_Chr8g0344151 35.011 457 280 9 36 480 34 485 5.23e-96 300
Msa0176170 MtrunA17_Chr5g0444981 83.333 180 30 0 310 489 20 199 4.03e-95 287
Msa0176170 MtrunA17_Chr8g0344181 33.917 457 285 8 36 480 36 487 1.56e-94 296
Msa0176170 MtrunA17_Chr1g0176851 58.547 234 95 1 124 355 1 234 3.88e-93 282
Msa0176170 MtrunA17_Chr4g0057001 34.279 458 291 6 20 470 33 487 1.37e-92 291
Msa0176170 MtrunA17_Chr6g0484841 34.681 470 285 7 27 482 26 487 4.34e-92 289
Msa0176170 MtrunA17_Chr3g0086691 35.714 462 273 9 47 487 41 499 4.64e-92 289
Msa0176170 MtrunA17_Chr1g0213671 36.232 483 283 11 33 494 29 507 5.53e-92 289
Msa0176170 MtrunA17_Chr2g0310391 34.310 478 295 10 14 478 1 472 4.13e-91 286
Msa0176170 MtrunA17_Chr3g0086661 36.659 461 270 8 47 487 41 499 6.21e-90 284
Msa0176170 MtrunA17_Chr3g0086651 36.207 464 274 8 47 490 41 502 1.03e-89 283
Msa0176170 MtrunA17_Chr8g0344191 33.193 476 298 10 18 480 51 519 1.76e-89 283
Msa0176170 MtrunA17_Chr2g0310381 33.753 477 299 10 14 478 1 472 3.39e-89 281
Msa0176170 MtrunA17_Chr5g0430101 32.927 492 308 8 5 482 1 484 2.34e-88 280
Msa0176170 MtrunA17_Chr4g0061381 35.320 453 263 10 58 487 51 496 2.40e-87 277
Msa0176170 MtrunA17_Chr5g0403351 34.038 473 284 8 28 482 24 486 3.81e-87 276
Msa0176170 MtrunA17_Chr8g0390881 33.401 494 305 9 12 488 8 494 7.34e-87 276
Msa0176170 MtrunA17_Chr5g0430031 31.612 484 317 6 10 482 7 487 8.53e-87 276
Msa0176170 MtrunA17_Chr3g0094171 33.333 492 306 10 15 488 14 501 1.06e-86 275
Msa0176170 MtrunA17_Chr5g0430131 33.264 481 304 6 13 482 12 486 2.88e-86 274
Msa0176170 MtrunA17_Chr7g0235551 33.195 482 302 9 5 470 2 479 7.19e-86 273
Msa0176170 MtrunA17_Chr7g0258221 33.402 482 299 9 5 470 2 477 2.29e-85 272
Msa0176170 MtrunA17_Chr5g0430091 32.510 486 315 6 13 488 12 494 4.62e-85 271
Msa0176170 MtrunA17_Chr4g0056951 34.532 417 263 5 62 470 68 482 2.52e-84 269
Msa0176170 MtrunA17_Chr7g0255531 31.328 482 297 9 16 478 9 475 1.23e-83 267
Msa0176170 MtrunA17_Chr2g0314781 66.102 177 55 2 317 492 1 173 2.00e-83 255
Msa0176170 MtrunA17_Chr8g0382901 34.557 463 282 10 31 482 485 937 3.44e-83 276
Msa0176170 MtrunA17_Chr8g0382901 33.537 492 292 10 12 492 1 468 3.04e-77 260
Msa0176170 MtrunA17_Chr5g0431641 33.917 457 287 9 34 482 34 483 3.44e-83 266
Msa0176170 MtrunA17_Chr3g0094231 33.333 471 293 9 32 488 30 493 4.44e-83 266
Msa0176170 MtrunA17_Chr6g0484811 31.453 461 305 5 31 482 30 488 3.08e-82 264
Msa0176170 MtrunA17_Chr8g0372251 34.542 469 268 9 32 477 31 483 3.24e-82 264
Msa0176170 MtrunA17_Chr3g0101581 30.966 507 312 11 10 491 11 504 6.99e-82 263
Msa0176170 MtrunA17_Chr5g0403321 33.262 466 288 8 30 478 26 485 8.78e-82 262
Msa0176170 MtrunA17_Chr1g0174481 30.126 478 314 8 2 467 1 470 7.73e-81 260
Msa0176170 MtrunA17_Chr3g0101711 32.826 460 289 7 38 484 37 489 1.18e-80 259
Msa0176170 MtrunA17_Chr1g0174471 30.977 481 307 9 6 469 21 493 1.19e-80 260
Msa0176170 MtrunA17_Chr5g0431671 32.826 460 289 9 34 482 34 484 1.40e-80 259
Msa0176170 MtrunA17_Chr5g0445461 34.454 476 294 11 12 478 13 479 1.95e-80 259
Msa0176170 MtrunA17_Chr5g0405001 31.405 484 306 9 11 478 19 492 3.90e-80 258
Msa0176170 MtrunA17_Chr3g0101721 32.640 481 304 9 14 482 14 486 1.67e-79 256
Msa0176170 MtrunA17_Chr6g0466331 33.473 478 298 10 10 472 2 474 1.67e-79 256
Msa0176170 MtrunA17_Chr8g0361471 33.473 478 298 10 10 472 2 474 1.92e-79 256
Msa0176170 MtrunA17_Chr3g0101631 31.799 478 303 10 15 480 11 477 2.70e-79 256
Msa0176170 MtrunA17_Chr1g0174461 30.498 482 312 9 2 467 1 475 3.16e-79 256
Msa0176170 MtrunA17_Chr6g0465511 33.473 478 298 10 10 472 2 474 3.67e-79 256
Msa0176170 MtrunA17_Chr1g0174451 31.134 485 307 11 1 467 1 476 5.23e-79 255
Msa0176170 MtrunA17_Chr3g0101731 31.828 487 312 10 7 482 7 484 5.92e-79 255
Msa0176170 MtrunA17_Chr3g0101701 32.823 457 293 7 38 484 38 490 7.15e-79 255
Msa0176170 MtrunA17_Chr3g0101671 33.060 487 307 9 13 484 8 490 1.33e-78 254
Msa0176170 MtrunA17_Chr5g0445451 32.842 475 303 9 12 478 13 479 1.88e-78 253
Msa0176170 MtrunA17_Chr5g0445441 32.225 481 305 9 10 478 49 520 3.62e-78 254
Msa0176170 MtrunA17_Chr5g0430081 32.025 484 307 7 13 482 10 485 6.32e-78 252
Msa0176170 MtrunA17_Chr4g0011981 33.407 452 281 9 39 477 30 474 6.79e-78 252
Msa0176170 MtrunA17_Chr4g0035921 31.590 497 299 13 10 479 11 493 6.81e-78 253
Msa0176170 MtrunA17_Chr3g0101611 31.034 464 294 8 30 478 30 482 8.29e-78 252
Msa0176170 MtrunA17_Chr3g0101691 32.724 492 313 10 15 492 11 498 2.57e-77 251
Msa0176170 MtrunA17_Chr5g0446161 31.405 484 308 9 13 484 14 485 4.21e-77 250
Msa0176170 MtrunA17_Chr3g0116681 31.868 455 298 7 31 478 33 482 4.33e-77 250
Msa0176170 MtrunA17_Chr5g0403331 31.144 472 309 8 19 478 16 483 6.14e-77 249
Msa0176170 MtrunA17_Chr4g0011961 31.677 483 307 10 10 479 3 475 6.90e-77 249
Msa0176170 MtrunA17_Chr1g0174441 29.876 482 318 9 2 467 20 497 1.41e-76 249
Msa0176170 MtrunA17_Chr4g0011901 31.223 458 299 9 33 479 24 476 1.62e-76 248
Msa0176170 MtrunA17_Chr3g0101571 31.155 459 296 9 35 482 33 482 3.42e-76 248
Msa0176170 MtrunA17_Chr4g0020041 32.577 485 296 13 19 482 11 485 1.72e-75 246
Msa0176170 MtrunA17_Chr3g0116741 29.026 503 336 9 6 494 21 516 2.87e-75 246
Msa0176170 MtrunA17_Chr4g0030701 32.892 453 284 8 33 467 30 480 4.46e-75 245
Msa0176170 MtrunA17_Chr1g0162811 32.653 490 303 11 13 484 5 485 4.65e-75 245
Msa0176170 MtrunA17_Chr3g0101601 31.753 485 311 11 7 482 7 480 9.15e-75 244
Msa0176170 MtrunA17_Chr4g0024771 33.038 451 281 8 39 478 39 479 1.17e-74 244
Msa0176170 MtrunA17_Chr3g0101661 31.537 501 326 8 5 492 1 497 2.85e-74 243
Msa0176170 MtrunA17_Chr3g0101651 32.823 457 293 8 38 484 38 490 3.45e-74 243
Msa0176170 MtrunA17_Chr1g0156101 31.601 481 292 10 30 483 24 494 4.11e-74 243
Msa0176170 MtrunA17_Chr4g0030711 32.297 418 262 8 69 467 68 483 5.93e-74 243
Msa0176170 MtrunA17_Chr3g0101621 30.957 491 321 10 11 492 3 484 6.47e-74 241
Msa0176170 MtrunA17_Chr6g0463801 30.705 482 305 7 30 492 29 500 2.22e-73 240
Msa0176170 MtrunA17_Chr4g0058281 28.908 467 318 6 10 467 20 481 2.47e-73 241
Msa0176170 MtrunA17_Chr3g0084921 28.717 491 321 10 1 470 1 483 5.53e-73 239
Msa0176170 MtrunA17_Chr3g0101761 33.061 490 306 9 7 484 7 486 6.20e-73 239
Msa0176170 MtrunA17_Chr3g0101811 30.316 475 305 8 30 482 29 499 1.00e-72 239
Msa0176170 MtrunA17_Chr3g0101751 33.602 497 296 12 10 484 9 493 1.80e-72 238
Msa0176170 MtrunA17_Chr4g0058231 32.083 480 310 8 12 477 1 478 2.52e-72 238
Msa0176170 MtrunA17_Chr7g0224561 30.804 448 284 8 38 467 31 470 2.77e-72 238
Msa0176170 MtrunA17_Chr4g0047691 30.426 493 297 11 11 480 27 496 3.93e-72 238
Msa0176170 MtrunA17_Chr1g0207841 32.160 426 270 8 59 467 59 482 4.09e-72 238
Msa0176170 MtrunA17_Chr6g0472311 31.111 495 311 11 9 479 7 495 8.51e-72 236
Msa0176170 MtrunA17_Chr3g0101821 33.265 490 303 10 10 482 2 484 1.06e-71 236
Msa0176170 MtrunA17_Chr8g0362701 30.328 488 313 10 1 470 1 479 1.09e-71 236
Msa0176170 MtrunA17_Chr4g0076161 31.250 496 318 11 10 492 11 496 1.16e-71 236
Msa0176170 MtrunA17_Chr3g0101801 33.063 493 299 11 5 482 15 491 1.56e-71 236
Msa0176170 MtrunA17_Chr7g0254641 29.149 470 315 7 24 477 25 492 2.10e-71 236
Msa0176170 MtrunA17_Chr7g0224551 30.042 476 301 10 10 467 9 470 2.26e-71 236
Msa0176170 MtrunA17_Chr5g0419691 32.688 465 291 10 30 480 21 477 3.61e-71 234
Msa0176170 MtrunA17_Chr4g0058191 30.444 473 317 7 12 477 1 468 4.84e-71 234
Msa0176170 MtrunA17_Chr5g0445381 31.808 459 294 9 34 482 65 514 6.54e-71 234
Msa0176170 MtrunA17_Chr5g0445531 32.294 449 288 9 38 478 38 478 9.96e-71 233
Msa0176170 MtrunA17_Chr5g0430111 33.890 419 259 6 13 419 12 424 1.31e-70 231
Msa0176170 MtrunA17_Chr1g0162801 33.676 487 302 11 13 484 8 488 4.96e-70 232
Msa0176170 MtrunA17_Chr4g0047641 30.928 485 312 9 11 482 25 499 6.36e-70 232
Msa0176170 MtrunA17_Chr4g0011921 30.290 482 316 10 10 479 3 476 1.09e-69 230
Msa0176170 MtrunA17_Chr5g0419451 30.937 459 284 11 23 465 45 486 5.97e-69 229
Msa0176170 MtrunA17_Chr4g0011871 31.522 460 304 7 30 480 21 478 8.34e-69 228
Msa0176170 MtrunA17_Chr5g0431501 29.103 457 306 7 38 481 33 484 1.55e-68 228
Msa0176170 MtrunA17_Chr5g0431461 29.103 457 306 7 38 481 33 484 1.55e-68 228
Msa0176170 MtrunA17_Chr5g0445421 32.000 475 286 9 12 478 87 532 1.62e-68 229
Msa0176170 MtrunA17_Chr3g0101741 33.094 417 261 7 73 482 1 406 1.76e-68 225
Msa0176170 MtrunA17_Chr4g0047661 28.936 470 326 5 19 480 29 498 1.77e-68 228
Msa0176170 MtrunA17_Chr3g0101831 32.449 490 318 9 1 482 1 485 1.87e-68 228
Msa0176170 MtrunA17_Chr5g0446151 29.336 467 301 9 32 484 35 486 1.92e-68 227
Msa0176170 MtrunA17_Chr6g0463791 30.303 495 321 14 13 492 7 492 5.35e-68 226
Msa0176170 MtrunA17_Chr5g0401691 32.000 500 303 11 7 487 28 509 1.22e-67 226
Msa0176170 MtrunA17_Chr4g0047631 28.986 483 299 9 21 480 32 493 2.13e-67 225
Msa0176170 MtrunA17_Chr4g0039391 32.093 430 275 9 59 477 56 479 2.46e-67 224
Msa0176170 MtrunA17_Chr4g0046351 31.347 453 274 12 39 467 35 474 3.76e-67 224
Msa0176170 MtrunA17_Chr8g0357431 33.766 462 284 10 34 482 33 485 5.39e-67 224
Msa0176170 MtrunA17_Chr4g0058201 30.416 457 309 6 28 477 19 473 9.12e-67 223
Msa0176170 MtrunA17_Chr5g0431511 29.736 454 303 8 38 479 33 482 9.87e-67 223
Msa0176170 MtrunA17_Chr4g0046321 31.395 430 262 9 59 467 57 474 3.54e-66 222
Msa0176170 MtrunA17_Chr8g0362481 30.340 412 271 8 73 470 1 410 9.13e-66 219
Msa0176170 MtrunA17_Chr5g0401681 30.335 478 303 8 10 476 11 469 9.68e-66 220
Msa0176170 MtrunA17_Chr4g0046331 31.416 452 271 12 39 464 35 473 1.89e-65 220
Msa0176170 MtrunA17_Chr8g0357421 31.976 491 301 11 11 482 8 484 6.77e-65 218
Msa0176170 MtrunA17_Chr5g0406651 30.998 471 309 9 19 480 15 478 1.10e-64 217
Msa0176170 MtrunA17_Chr1g0167321 33.333 486 305 10 13 484 5 485 1.29e-64 217
Msa0176170 MtrunA17_Chr5g0430071 38.194 288 162 5 207 482 57 340 1.23e-63 211
Msa0176170 MtrunA17_Chr7g0218611 29.565 460 306 9 32 479 27 480 1.43e-63 214
Msa0176170 MtrunA17_Chr6g0451781 31.166 446 275 11 58 477 96 535 1.98e-63 216
Msa0176170 MtrunA17_Chr2g0296651 29.532 491 312 11 12 487 12 483 2.75e-63 214
Msa0176170 MtrunA17_Chr4g0058261 28.352 455 313 8 22 467 49 499 4.20e-63 214
Msa0176170 MtrunA17_Chr6g0451741 30.417 480 291 13 18 464 43 512 9.19e-63 214
Msa0176170 MtrunA17_Chr4g0017411 31.648 455 292 7 23 472 14 454 1.71e-62 211
Msa0176170 MtrunA17_Chr4g0052881 31.398 465 297 7 19 472 14 467 2.20e-62 211
Msa0176170 MtrunA17_Chr8g0377341 31.102 463 300 12 13 465 42 495 1.10e-61 210
Msa0176170 MtrunA17_Chr1g0156081 31.733 479 296 11 29 483 47 518 1.13e-61 210
Msa0176170 MtrunA17_Chr6g0451691 30.417 480 292 14 18 464 24 494 1.96e-61 209
Msa0176170 MtrunA17_Chr6g0451641 31.161 491 290 18 20 476 18 494 2.21e-61 209
Msa0176170 MtrunA17_Chr4g0053621 30.337 445 283 9 38 466 31 464 2.79e-61 209
Msa0176170 MtrunA17_Chr4g0052861 29.336 467 309 7 10 466 5 460 2.96e-61 208
Msa0176170 MtrunA17_Chr3g0082701 29.901 505 314 12 6 477 6 503 6.68e-61 208
Msa0176170 MtrunA17_Chr1g0198191 28.270 474 311 13 10 465 21 483 9.30e-61 207
Msa0176170 MtrunA17_Chr7g0218601 27.293 458 313 9 34 479 30 479 9.66e-61 207
Msa0176170 MtrunA17_Chr4g0052851 30.454 463 302 8 23 480 17 464 9.89e-61 207
Msa0176170 MtrunA17_Chr8g0339311 29.375 480 291 12 18 476 48 500 3.14e-60 206
Msa0176170 MtrunA17_Chr6g0451751 28.340 494 315 11 2 464 5 490 8.26e-60 205
Msa0176170 MtrunA17_Chr6g0451681 29.638 469 267 11 5 464 29 443 1.02e-58 201
Msa0176170 MtrunA17_Chr4g0008101 28.189 486 308 11 10 464 15 490 2.16e-58 201
Msa0176170 MtrunA17_Chr2g0280261 31.613 465 297 7 30 484 26 479 1.82e-57 198
Msa0176170 MtrunA17_Chr4g0011881 29.600 500 275 11 19 479 15 476 3.73e-57 197
Msa0176170 MtrunA17_Chr7g0258211 29.237 472 294 14 48 491 52 511 1.12e-55 194
Msa0176170 MtrunA17_Chr6g0466941 31.028 506 304 19 5 476 1 495 1.27e-55 194
Msa0176170 MtrunA17_Chr5g0431591 34.409 279 175 4 206 478 21 297 2.31e-55 187
Msa0176170 MtrunA17_Chr1g0156061 30.958 449 252 8 39 483 56 450 4.25e-55 191
Msa0176170 MtrunA17_Chr8g0346261 32.673 404 251 12 72 465 121 513 1.73e-54 191
Msa0176170 MtrunA17_Chr6g0466901 31.225 506 302 18 5 476 1 494 3.05e-54 190
Msa0176170 MtrunA17_Chr8g0351801 28.635 447 290 9 60 481 56 498 8.15e-54 189
Msa0176170 MtrunA17_Chr6g0458561 27.234 470 322 7 12 464 28 494 2.31e-53 188
Msa0176170 MtrunA17_Chr1g0200951 28.078 463 300 15 25 465 46 497 3.18e-52 185
Msa0176170 MtrunA17_Chr2g0310351 45.251 179 97 1 301 478 1 179 3.81e-52 175
Msa0176170 MtrunA17_Chr8g0339331 27.876 452 291 12 39 464 39 481 3.86e-52 184
Msa0176170 MtrunA17_Chr4g0046631 28.894 443 293 10 50 476 60 496 3.90e-52 184
Msa0176170 MtrunA17_Chr1g0174431 45.506 178 88 3 301 470 1 177 1.05e-50 172
Msa0176170 MtrunA17_Chr8g0390871 40.291 206 120 3 279 482 5 209 1.71e-50 172
Msa0176170 MtrunA17_Chr2g0304871 27.789 475 305 14 18 464 17 481 2.07e-50 180
Msa0176170 MtrunA17_Chr4g0058211 43.085 188 103 2 294 477 9 196 2.32e-50 171
Msa0176170 MtrunA17_Chr2g0314771 53.125 160 73 1 73 230 1 160 4.71e-50 168
Msa0176170 MtrunA17_Chr5g0423621 45.055 182 87 3 317 487 1 180 4.87e-50 169
Msa0176170 MtrunA17_Chr2g0296661 30.176 454 285 9 59 488 53 498 2.40e-49 176
Msa0176170 MtrunA17_Chr3g0107611 27.463 477 322 10 13 465 23 499 2.95e-49 177
Msa0176170 MtrunA17_Chr4g0011851 42.553 188 107 1 294 480 9 196 3.62e-49 168
Msa0176170 MtrunA17_Chr8g0370641 26.489 487 330 12 5 467 7 489 8.14e-49 176
Msa0176170 MtrunA17_Chr1g0210091 27.570 428 289 10 59 470 87 509 3.61e-48 174
Msa0176170 MtrunA17_Chr5g0432751 24.722 449 323 6 29 464 24 470 8.30e-48 172
Msa0176170 MtrunA17_Chr8g0370651 26.613 496 325 14 15 479 14 501 2.77e-47 171
Msa0176170 MtrunA17_Chr5g0446101 37.500 216 130 3 274 485 85 299 2.18e-46 164
Msa0176170 MtrunA17_Chr4g0011941 43.889 180 100 1 301 479 1 180 9.30e-46 158
Msa0176170 MtrunA17_Chr3g0101591 40.000 180 107 1 300 478 38 217 1.87e-44 156
Msa0176170 MtrunA17_Chr2g0280081 28.404 426 269 16 69 470 565 978 1.46e-43 165
Msa0176170 MtrunA17_Chr2g0280081 29.481 424 267 14 69 470 64 477 4.65e-40 154
Msa0176170 MtrunA17_Chr2g0280071 26.829 492 308 17 12 470 38 510 1.88e-43 163
Msa0176170 MtrunA17_Chr3g0107541 25.349 430 305 6 54 467 67 496 2.38e-43 160
Msa0176170 MtrunA17_Chr6g0451771 41.935 186 102 4 296 477 17 200 2.65e-43 153
Msa0176170 MtrunA17_Chr8g0364651 25.793 473 321 12 12 466 7 467 1.27e-42 158
Msa0176170 MtrunA17_Chr6g0451811 40.217 184 104 4 297 476 1 182 5.41e-42 149
Msa0176170 MtrunA17_Chr4g0046681 40.212 189 105 4 291 476 25 208 8.17e-42 149
Msa0176170 MtrunA17_Chr2g0280121 28.774 424 272 14 69 470 68 483 1.24e-41 155
Msa0176170 MtrunA17_Chr8g0387101 28.538 424 285 10 69 477 66 486 3.44e-41 154
Msa0176170 MtrunA17_Chr5g0413911 26.380 489 319 14 38 493 42 522 1.37e-40 153
Msa0176170 MtrunA17_Chr4g0074581 22.336 488 347 13 1 465 33 511 3.50e-40 152
Msa0176170 MtrunA17_Chr6g0463621 39.086 197 114 4 301 492 1 196 1.40e-39 142
Msa0176170 MtrunA17_Chr5g0445371 35.593 236 115 5 247 478 7 209 1.74e-39 143
Msa0176170 MtrunA17_Chr2g0280041 27.593 482 317 15 12 470 37 509 1.95e-39 150
Msa0176170 MtrunA17_Chr5g0409051 24.625 467 315 12 35 472 26 484 2.28e-39 149
Msa0176170 MtrunA17_Chr3g0086681 49.655 145 68 3 341 480 5 149 2.84e-39 140
Msa0176170 MtrunA17_Chr6g0477081 33.469 245 146 4 169 408 7 239 7.71e-39 141
Msa0176170 MtrunA17_Chr5g0402981 41.520 171 91 4 313 479 4 169 5.95e-38 137
Msa0176170 MtrunA17_Chr5g0445761 47.674 172 89 1 301 471 1 172 1.22e-37 137
Msa0176170 MtrunA17_Chr4g0046661 40.000 180 105 2 294 470 18 197 3.40e-37 136
Msa0176170 MtrunA17_Chr5g0445351 41.026 156 91 1 328 482 51 206 3.50e-37 136
Msa0176170 MtrunA17_Chr5g0430041 35.404 161 102 2 327 485 1 161 6.85e-37 134
Msa0176170 MtrunA17_Chr5g0444971 78.049 82 18 0 84 165 1 82 1.12e-36 130
Msa0176170 MtrunA17_Chr3g0101541 43.704 135 75 1 349 482 1 135 1.69e-34 126
Msa0176170 MtrunA17_Chr8g0364631 28.200 461 282 16 38 466 32 475 2.88e-34 135
Msa0176170 MtrunA17_Chr2g0334021 24.891 458 312 12 35 472 30 475 5.42e-34 134
Msa0176170 MtrunA17_Chr2g0280061 38.587 184 103 5 296 470 3 185 3.48e-33 125
Msa0176170 MtrunA17_Chr2g0280011 38.043 184 104 5 296 470 3 185 3.70e-33 125
Msa0176170 MtrunA17_Chr8g0381571 25.949 474 291 18 4 448 2 444 2.45e-32 129
Msa0176170 MtrunA17_Chr8g0381541 25.949 474 291 18 4 448 2 444 4.14e-32 128
Msa0176170 MtrunA17_Chr5g0430151 32.911 158 104 2 327 482 1 158 8.30e-32 120
Msa0176170 MtrunA17_Chr4g0076171 37.363 182 88 4 317 492 1 162 3.96e-30 115
Msa0176170 MtrunA17_Chr5g0445361 45.133 113 61 1 371 482 8 120 6.02e-29 111
Msa0176170 MtrunA17_Chr3g0117301 40.171 117 69 1 352 467 1 117 1.40e-28 109
Msa0176170 MtrunA17_Chr4g0046701 39.231 130 76 2 344 470 2 131 3.12e-28 110
Msa0176170 MtrunA17_Chr4g0030761 37.086 151 69 5 352 492 1 135 2.05e-27 107
Msa0176170 MtrunA17_Chr3g0107551 32.941 170 110 2 300 465 4 173 3.37e-27 108
Msa0176170 MtrunA17_Chr3g0105761 34.118 170 106 3 302 467 1 168 5.18e-26 105
Msa0176170 MtrunA17_Chr2g0293411 27.211 441 270 21 29 448 32 442 6.81e-26 110
Msa0176170 MtrunA17_Chr4g0028321 43.750 112 60 3 370 479 27 137 8.05e-26 103
Msa0176170 MtrunA17_Chr5g0430171 32.727 220 146 1 13 232 12 229 1.72e-25 104
Msa0176170 MtrunA17_Chr8g0351401 30.568 229 146 4 254 469 256 484 1.77e-25 109
Msa0176170 MtrunA17_Chr0c19g0493771 30.350 257 164 8 226 473 376 626 1.62e-23 104
Msa0176170 MtrunA17_Chr4g0030741 24.107 336 229 8 2 324 27 349 6.04e-23 100
Msa0176170 MtrunA17_Chr8g0339861 29.110 292 176 9 189 468 187 459 8.19e-23 101
Msa0176170 MtrunA17_Chr1g0204271 28.696 230 144 6 255 469 256 480 9.36e-23 101
Msa0176170 MtrunA17_Chr2g0293421 25.383 457 292 20 35 474 42 466 1.96e-22 100
Msa0176170 MtrunA17_Chr3g0116731 42.202 109 56 3 354 460 3 106 4.78e-22 92.0
Msa0176170 MtrunA17_Chr8g0351311 25.208 361 242 12 130 469 133 486 7.48e-22 98.6
Msa0176170 MtrunA17_Chr3g0135841 24.846 487 294 17 40 472 44 512 9.90e-22 98.2
Msa0176170 MtrunA17_Chr1g0174421 24.671 304 220 5 7 304 19 319 1.34e-21 95.9
Msa0176170 MtrunA17_Chr5g0400411 30.417 240 145 7 256 488 252 476 1.77e-21 97.4
Msa0176170 MtrunA17_Chr5g0400421 35.227 176 100 5 280 448 277 445 3.79e-21 96.3
Msa0176170 MtrunA17_Chr5g0396521 30.417 240 132 7 264 472 312 547 5.06e-21 96.3
Msa0176170 MtrunA17_Chr8g0351391 24.309 362 243 13 130 469 133 485 6.41e-21 95.9
Msa0176170 MtrunA17_Chr1g0176861 48.421 95 48 1 1 95 1 94 2.10e-20 85.9
Msa0176170 MtrunA17_Chr3g0113321 27.143 280 178 9 192 465 182 441 5.11e-20 92.8
Msa0176170 MtrunA17_Chr5g0443401 21.285 498 314 16 1 467 1 451 5.55e-20 92.8
Msa0176170 MtrunA17_Chr8g0351421 26.293 232 158 3 254 472 256 487 1.07e-19 92.0
Msa0176170 MtrunA17_Chr4g0004481 28.505 214 141 6 256 461 251 460 1.31e-19 91.7
Msa0176170 MtrunA17_Chr5g0403931 26.815 496 291 24 2 467 1 454 2.03e-19 90.9
Msa0176170 MtrunA17_Chr8g0351441 26.378 254 166 5 254 486 255 508 3.57e-19 90.5
Msa0176170 MtrunA17_Chr8g0351461 27.586 232 155 5 254 472 255 486 1.90e-18 88.2
Msa0176170 MtrunA17_Chr2g0313821 26.222 225 152 6 253 467 269 489 2.02e-18 88.2
Msa0176170 MtrunA17_Chr3g0089361 28.959 221 148 6 252 469 239 453 3.36e-18 87.0
Msa0176170 MtrunA17_Chr2g0321171 27.700 213 145 4 255 464 261 467 7.77e-18 86.3
Msa0176170 MtrunA17_Chr3g0141801 24.213 413 266 12 69 467 78 457 1.30e-17 85.5
Msa0176170 MtrunA17_Chr5g0429651 30.729 192 118 5 272 448 271 462 1.30e-17 85.5
Msa0176170 MtrunA17_Chr4g0056981 50.704 71 35 0 327 397 1 71 1.74e-17 77.0
Msa0176170 MtrunA17_Chr5g0445751 29.545 176 119 3 13 187 19 190 1.86e-17 83.2
Msa0176170 MtrunA17_Chr3g0089351 28.125 224 146 6 252 469 157 371 1.95e-17 84.3
Msa0176170 MtrunA17_Chr8g0372591 29.167 144 97 2 299 437 1 144 1.98e-17 79.3
Msa0176170 MtrunA17_Chr1g0179811 22.803 421 301 12 62 467 101 512 2.02e-17 85.1
Msa0176170 MtrunA17_Chr4g0011861 28.667 150 106 1 30 178 21 170 2.21e-17 82.8
Msa0176170 MtrunA17_Chr2g0313771 27.642 246 165 6 232 467 254 496 4.13e-17 84.0
Msa0176170 MtrunA17_Chr1g0203141 25.079 315 199 14 164 467 200 488 5.44e-17 83.6
Msa0176170 MtrunA17_Chr4g0011931 27.922 154 106 3 11 162 4 154 5.68e-17 81.6
Msa0176170 MtrunA17_Chr2g0313831 27.273 231 153 8 248 467 263 489 6.90e-17 83.2
Msa0176170 MtrunA17_Chr1g0151221 31.004 229 143 9 252 472 283 504 8.50e-17 83.2
Msa0176170 MtrunA17_Chr2g0313751 25.301 249 173 6 229 467 271 516 9.17e-17 83.2
Msa0176170 MtrunA17_Chr2g0313761 24.324 333 212 9 148 469 183 486 9.45e-17 82.8
Msa0176170 MtrunA17_Chr7g0248991 31.000 200 125 7 226 418 158 351 9.61e-17 82.0
Msa0176170 MtrunA17_Chr5g0443731 28.293 205 133 5 270 467 249 446 1.13e-16 82.4
Msa0176170 MtrunA17_Chr8g0387001 30.348 201 128 5 260 448 259 459 1.82e-16 82.0
Msa0176170 MtrunA17_Chr7g0215181 25.633 316 220 10 159 469 179 484 2.00e-16 82.0
Msa0176170 MtrunA17_Chr7g0235261 28.899 218 141 6 256 463 266 479 2.11e-16 81.6
Msa0176170 MtrunA17_Chr3g0107501 28.216 241 151 6 255 487 237 463 2.25e-16 81.6
Msa0176170 MtrunA17_Chr2g0307291 24.412 340 217 10 139 467 181 491 3.54e-16 81.3
Msa0176170 MtrunA17_Chr2g0313781 28.261 230 146 8 251 467 278 501 4.22e-16 80.9
Msa0176170 MtrunA17_Chr1g0204241 28.713 202 134 6 272 467 72 269 4.44e-16 79.0
Msa0176170 MtrunA17_Chr4g0026941 30.899 178 120 3 290 464 331 508 5.96e-16 80.5
Msa0176170 MtrunA17_Chr2g0313791 25.581 301 196 10 177 467 202 484 7.87e-16 80.1
Msa0176170 MtrunA17_Chr1g0203151 28.000 225 144 10 255 470 272 487 1.02e-15 79.7
Msa0176170 MtrunA17_Chr1g0207851 24.696 247 167 7 69 299 69 312 1.32e-15 78.2
Msa0176170 MtrunA17_Chr6g0449381 25.877 228 160 6 255 473 257 484 1.70e-15 79.0
Msa0176170 MtrunA17_Chr5g0423601 39.024 82 50 0 121 202 1 82 1.83e-15 72.0
Msa0176170 MtrunA17_Chr8g0334941 28.241 216 146 5 270 477 97 311 2.28e-15 77.4
Msa0176170 MtrunA17_Chr1g0163281 27.155 232 154 7 252 470 266 495 2.59e-15 78.6
Msa0176170 MtrunA17_Chr2g0307301 25.926 324 193 11 158 467 201 491 3.01e-15 78.2
Msa0176170 MtrunA17_Chr4g0063221 30.000 170 116 3 300 467 324 492 3.08e-15 78.2
Msa0176170 MtrunA17_Chr2g0313801 27.014 211 136 6 270 467 284 489 4.58e-15 77.8
Msa0176170 MtrunA17_Chr5g0397971 20.211 475 332 14 7 466 2 444 4.97e-15 77.4
Msa0176170 MtrunA17_Chr6g0472221 28.378 222 143 7 255 467 285 499 6.48e-15 77.0
Msa0176170 MtrunA17_Chr7g0227281 24.771 218 156 5 252 461 245 462 6.62e-15 77.0
Msa0176170 MtrunA17_Chr4g0004601 28.440 218 142 6 256 463 287 500 8.11e-15 77.0
Msa0176170 MtrunA17_Chr1g0176841 59.615 52 17 1 441 492 1 48 8.95e-15 68.6
Msa0176170 MtrunA17_Chr3g0104351 27.835 194 123 5 272 448 277 470 1.02e-14 76.6
Msa0176170 MtrunA17_Chr6g0449361 25.472 212 148 5 272 473 271 482 1.32e-14 76.3
Msa0176170 MtrunA17_Chr6g0449341 27.000 200 137 5 273 463 333 532 1.38e-14 76.3
Msa0176170 MtrunA17_Chr4g0038271 23.651 241 168 6 250 474 302 542 1.61e-14 76.3
Msa0176170 MtrunA17_Chr2g0313811 26.316 228 148 8 253 467 281 501 2.03e-14 75.5
Msa0176170 MtrunA17_Chr8g0348751 30.806 211 131 7 252 448 255 464 2.27e-14 75.5
Msa0176170 MtrunA17_Chr7g0260821 24.887 221 150 6 250 463 259 470 2.27e-14 75.5
Msa0176170 MtrunA17_Chr8g0380471 28.333 240 160 8 236 469 219 452 2.66e-14 75.1
Msa0176170 MtrunA17_Chr7g0227291 25.455 220 152 6 252 461 245 462 3.10e-14 75.1
Msa0176170 MtrunA17_Chr6g0449351 25.225 222 155 6 263 473 221 442 3.82e-14 74.7
Msa0176170 MtrunA17_Chr2g0310371 27.586 145 102 1 14 155 1 145 4.00e-14 69.7
Msa0176170 MtrunA17_Chr8g0381551 23.011 352 221 14 4 331 2 327 4.05e-14 73.6
Msa0176170 MtrunA17_Chr5g0446131 24.797 246 172 6 232 467 245 487 4.29e-14 74.7
Msa0176170 MtrunA17_Chr1g0163371 27.835 194 129 5 286 470 7 198 5.02e-14 71.6
Msa0176170 MtrunA17_Chr2g0288661 24.390 246 173 6 232 467 249 491 6.21e-14 73.9
Msa0176170 MtrunA17_Chr6g0479681 25.217 230 147 9 263 470 279 505 6.70e-14 73.9
Msa0176170 MtrunA17_Chr3g0107561 24.675 308 209 7 5 289 1 308 8.60e-14 72.4
Msa0176170 MtrunA17_Chr1g0184421 23.779 307 211 8 177 474 192 484 9.10e-14 73.6
Msa0176170 MtrunA17_Chr6g0463611 21.502 293 214 9 1 286 11 294 1.10e-13 72.0
Msa0176170 MtrunA17_Chr4g0046691 23.881 268 192 6 30 292 30 290 1.64e-13 71.2
Msa0176170 MtrunA17_Chr7g0262111 23.112 437 287 13 47 467 75 478 1.89e-13 72.4
Msa0176170 MtrunA17_Chr4g0044841 27.619 210 141 5 263 467 242 445 1.91e-13 72.4
Msa0176170 MtrunA17_Chr7g0260831 24.664 223 148 7 250 463 258 469 2.36e-13 72.4
Msa0176170 MtrunA17_Chr1g0163511 27.461 193 127 6 281 463 299 488 2.55e-13 72.0
Msa0176170 MtrunA17_Chr5g0445411 27.711 166 113 3 2 165 14 174 2.63e-13 68.2
Msa0176170 MtrunA17_Chr1g0184461 25.773 194 132 5 290 474 294 484 5.23e-13 71.2
Msa0176170 MtrunA17_Chr5g0431631 34.746 118 75 1 30 145 42 159 5.61e-13 67.0
Msa0176170 MtrunA17_Chr1g0163451 24.623 199 141 5 281 470 302 500 8.57e-13 70.5
Msa0176170 MtrunA17_Chr1g0163391 27.477 222 143 7 263 470 261 478 1.44e-12 69.7
Msa0176170 MtrunA17_Chr8g0380501 27.136 199 133 5 252 440 241 437 1.60e-12 69.7
Msa0176170 MtrunA17_Chr7g0246141 34.545 110 66 2 205 311 5 111 1.66e-12 64.3
Msa0176170 MtrunA17_Chr1g0163421 23.684 190 138 4 288 470 327 516 2.89e-12 68.9
Msa0176170 MtrunA17_Chr5g0430051 40.000 95 57 0 11 105 11 105 4.33e-12 63.2
Msa0176170 MtrunA17_Chr5g0423611 34.211 76 50 0 214 289 1 76 1.04e-11 60.8
Msa0176170 MtrunA17_Chr8g0354541 28.378 148 102 4 322 467 6 151 1.49e-11 63.2
Msa0176170 MtrunA17_Chr5g0404861 34.146 123 77 3 347 468 17 136 1.61e-11 62.8
Msa0176170 MtrunA17_Chr3g0081401 33.333 147 77 6 345 470 20 166 3.19e-11 62.8
Msa0176170 MtrunA17_Chr8g0371761 26.712 146 92 3 320 450 1 146 8.00e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0176170 AT3G61040.1 41.901 463 257 5 29 484 24 481 1.74e-131 390
Msa0176170 AT2G45550.1 39.406 505 284 7 5 487 1 505 2.48e-129 385
Msa0176170 AT2G45560.1 38.735 506 286 7 5 487 1 505 1.53e-123 371
Msa0176170 AT2G45570.1 39.328 506 284 7 5 487 1 506 1.01e-120 363
Msa0176170 AT2G45580.1 40.217 460 254 5 48 487 48 506 2.20e-118 357
Msa0176170 AT1G33720.1 36.680 488 297 5 5 480 1 488 5.44e-115 348
Msa0176170 AT5G07990.1 34.921 504 301 13 8 490 1 498 3.90e-96 300
Msa0176170 AT1G33730.1 40.870 345 197 3 141 478 6 350 2.05e-94 291
Msa0176170 AT1G33730.2 40.870 345 197 3 141 478 6 350 2.05e-94 291
Msa0176170 AT2G45580.2 41.311 351 185 5 157 487 3 352 2.86e-92 285
Msa0176170 AT1G33720.4 40.000 355 206 3 133 480 2 356 4.22e-92 285
Msa0176170 AT1G33720.3 40.000 355 206 3 133 480 2 356 4.22e-92 285
Msa0176170 AT1G33720.5 40.000 355 206 3 133 480 2 356 4.22e-92 285
Msa0176170 AT5G44620.1 32.981 473 306 4 5 470 17 485 2.72e-90 285
Msa0176170 AT3G52970.1 32.937 504 317 10 12 494 10 513 7.02e-89 281
Msa0176170 AT3G61040.2 38.874 373 217 4 29 395 24 391 7.61e-89 278
Msa0176170 AT4G12320.1 34.115 469 292 7 15 470 20 484 1.59e-87 278
Msa0176170 AT3G26310.1 32.582 488 306 7 5 480 1 477 2.75e-87 277
Msa0176170 AT3G52970.2 32.046 518 317 10 12 494 10 527 3.67e-87 277
Msa0176170 AT4G12300.1 34.389 442 280 5 38 470 42 482 6.41e-87 276
Msa0176170 AT3G26300.1 32.919 483 305 7 10 480 3 478 1.78e-86 275
Msa0176170 AT4G12330.1 34.541 414 261 5 65 470 73 484 4.76e-86 274
Msa0176170 AT4G12310.1 34.679 421 261 5 62 470 68 486 1.50e-84 270
Msa0176170 AT4G22710.1 35.172 435 262 8 69 487 85 515 2.41e-84 270
Msa0176170 AT4G22690.1 35.172 435 262 8 69 487 116 546 8.76e-84 270
Msa0176170 AT1G33720.2 37.076 383 203 6 133 480 2 381 1.09e-83 265
Msa0176170 AT3G26330.1 32.826 460 290 6 33 480 26 478 7.90e-82 263
Msa0176170 AT5G57260.1 32.328 464 295 7 31 480 23 481 2.83e-81 261
Msa0176170 AT5G25140.1 31.875 480 312 7 12 481 1 475 3.09e-81 261
Msa0176170 AT5G25120.1 30.544 478 317 7 12 480 3 474 1.92e-80 259
Msa0176170 AT5G25180.1 32.272 471 301 9 21 480 11 474 3.10e-80 258
Msa0176170 AT3G26320.1 30.526 475 308 6 18 480 14 478 8.06e-80 257
Msa0176170 AT4G13770.1 31.546 485 305 12 11 479 6 479 1.12e-78 254
Msa0176170 AT2G45580.3 37.640 356 212 3 48 394 48 402 4.89e-78 250
Msa0176170 AT2G40890.1 30.556 468 294 7 32 480 21 476 1.58e-77 252
Msa0176170 AT3G26180.1 31.365 491 306 10 12 480 1 482 5.87e-77 250
Msa0176170 AT1G13080.1 31.400 500 313 11 16 489 1 496 6.39e-77 250
Msa0176170 AT5G25130.1 32.462 459 293 7 32 480 23 474 1.55e-76 249
Msa0176170 AT5G06900.1 31.174 494 319 10 4 487 3 485 8.21e-76 247
Msa0176170 AT4G31500.1 32.025 484 295 14 15 479 10 478 7.13e-75 244
Msa0176170 AT3G26170.1 29.878 492 314 10 8 480 3 482 1.58e-74 244
Msa0176170 AT3G26280.1 32.203 472 304 8 21 480 15 482 2.45e-74 243
Msa0176170 AT3G26280.2 32.203 472 304 8 21 480 32 499 3.85e-74 243
Msa0176170 AT4G37410.1 32.359 479 296 10 6 472 3 465 1.85e-73 241
Msa0176170 AT4G36220.1 30.349 458 287 8 45 479 47 495 1.97e-73 241
Msa0176170 AT5G67310.1 30.181 497 323 8 8 487 12 501 2.12e-73 241
Msa0176170 AT1G74550.1 29.938 481 301 10 12 477 1 460 6.51e-73 239
Msa0176170 AT1G74540.1 29.577 497 314 9 12 493 1 476 1.45e-72 238
Msa0176170 AT3G48280.1 31.385 462 304 7 11 467 3 456 3.81e-72 237
Msa0176170 AT3G26290.1 32.613 463 293 5 30 480 23 478 4.88e-72 237
Msa0176170 AT2G02580.1 32.075 477 308 7 13 480 9 478 7.14e-72 237
Msa0176170 AT3G26290.2 32.613 463 293 5 30 480 36 491 8.90e-72 237
Msa0176170 AT3G26160.1 30.642 483 316 7 11 480 6 482 2.99e-71 235
Msa0176170 AT3G26270.1 32.008 478 301 10 30 489 24 495 5.38e-71 234
Msa0176170 AT1G13110.1 31.161 491 307 9 12 480 3 484 1.07e-70 234
Msa0176170 AT3G26150.1 28.333 480 331 6 11 480 6 482 1.22e-70 233
Msa0176170 AT5G57220.1 32.193 497 303 13 5 485 1 479 1.87e-70 233
Msa0176170 AT4G13290.1 30.501 459 303 7 26 479 21 468 2.39e-70 232
Msa0176170 AT2G30770.1 31.973 441 286 10 38 470 33 467 5.07e-70 232
Msa0176170 AT4G13310.1 28.850 461 316 7 26 479 20 475 5.41e-70 231
Msa0176170 AT4G37360.1 31.667 480 302 11 10 477 3 468 9.61e-70 231
Msa0176170 AT4G37430.1 29.583 480 308 10 11 472 1 468 1.25e-69 231
Msa0176170 AT5G04330.1 30.719 459 289 11 39 477 33 482 2.20e-69 230
Msa0176170 AT4G37310.1 31.027 477 307 9 11 470 3 474 5.50e-68 227
Msa0176170 AT3G26210.1 30.684 453 286 8 47 481 40 482 1.21e-67 226
Msa0176170 AT4G37340.1 31.042 480 295 14 13 477 10 468 2.11e-66 222
Msa0176170 AT5G36220.1 31.237 477 299 11 11 472 8 470 2.48e-66 222
Msa0176170 AT4G31940.1 30.784 510 316 12 10 488 4 507 2.64e-66 223
Msa0176170 AT2G24180.1 31.011 445 291 7 33 466 31 470 2.76e-66 222
Msa0176170 AT3G26230.1 30.020 493 320 9 19 489 3 492 7.56e-66 221
Msa0176170 AT3G48310.1 29.120 443 298 9 30 467 26 457 1.87e-65 219
Msa0176170 AT4G37330.1 30.061 489 312 12 13 487 6 478 6.62e-65 218
Msa0176170 AT1G13090.2 31.915 470 278 10 32 476 22 474 1.57e-64 217
Msa0176170 AT2G23220.1 29.806 463 295 9 34 482 42 488 2.38e-64 217
Msa0176170 AT4G37370.1 31.924 473 282 15 10 466 9 457 2.84e-64 216
Msa0176170 AT3G48270.1 28.924 446 295 9 30 467 25 456 5.25e-64 216
Msa0176170 AT4G37400.1 31.455 426 265 11 64 476 57 468 9.76e-64 215
Msa0176170 AT1G01280.1 29.263 434 292 5 47 465 41 474 2.36e-63 214
Msa0176170 AT3G28740.1 33.113 453 268 12 30 466 33 466 3.47e-63 214
Msa0176170 AT2G42250.1 29.204 452 299 7 37 472 40 486 8.14e-63 213
Msa0176170 AT3G26190.1 32.409 469 294 8 28 480 18 479 9.42e-63 213
Msa0176170 AT4G31970.1 29.317 498 317 10 10 477 4 496 1.01e-62 213
Msa0176170 AT1G11610.1 32.181 463 292 11 31 479 28 482 1.16e-62 212
Msa0176170 AT1G11610.2 32.181 463 292 11 31 479 28 482 1.74e-62 212
Msa0176170 AT1G74110.1 29.935 461 296 13 27 465 52 507 3.17e-62 212
Msa0176170 AT3G44250.1 33.406 461 287 9 34 480 24 478 5.02e-62 211
Msa0176170 AT3G48290.1 29.279 444 300 8 28 467 25 458 5.77e-62 210
Msa0176170 AT5G24950.1 29.083 447 308 6 38 478 32 475 1.12e-61 209
Msa0176170 AT3G26200.1 31.533 463 294 8 34 480 24 479 1.43e-61 209
Msa0176170 AT1G13710.1 31.356 472 298 15 9 465 22 482 3.08e-61 209
Msa0176170 AT2G23190.1 29.701 468 301 11 13 466 49 502 3.85e-61 209
Msa0176170 AT4G37320.1 29.792 480 303 15 13 476 6 467 4.34e-61 208
Msa0176170 AT5G06905.1 28.454 485 323 8 5 469 1 481 4.35e-61 209
Msa0176170 AT2G46660.1 30.508 472 304 13 22 483 55 512 5.60e-61 209
Msa0176170 AT3G53280.1 31.729 457 299 7 34 480 24 477 1.20e-60 207
Msa0176170 AT3G48300.1 28.868 433 292 10 40 466 31 453 1.30e-60 206
Msa0176170 AT3G48300.2 28.868 433 292 10 40 466 33 455 1.36e-60 206
Msa0176170 AT1G01190.1 30.998 471 295 14 22 477 56 511 4.43e-60 206
Msa0176170 AT1G01190.2 30.998 471 295 14 22 477 61 516 4.56e-60 206
Msa0176170 AT3G20140.1 28.302 477 311 14 33 488 37 503 8.15e-60 205
Msa0176170 AT1G66540.1 35.079 382 219 11 121 487 1 368 1.58e-59 201
Msa0176170 AT3G48320.1 30.000 470 311 10 14 478 12 468 2.55e-59 203
Msa0176170 AT5G35715.1 32.117 411 262 10 83 480 11 417 2.57e-59 202
Msa0176170 AT2G25160.1 31.687 486 291 13 11 464 4 480 3.69e-59 204
Msa0176170 AT1G13080.2 33.239 355 215 10 153 489 28 378 5.42e-59 199
Msa0176170 AT5G10600.1 28.723 470 304 12 12 466 23 476 6.60e-59 203
Msa0176170 AT3G53300.1 31.818 462 288 10 37 480 27 479 7.19e-59 202
Msa0176170 AT3G26830.1 28.690 481 317 8 11 476 5 474 8.43e-59 202
Msa0176170 AT3G20130.1 28.571 427 278 9 60 469 65 481 4.27e-58 201
Msa0176170 AT2G30750.1 31.900 442 285 9 38 470 33 467 6.93e-58 199
Msa0176170 AT3G26220.1 31.237 477 305 10 32 489 23 495 9.99e-58 199
Msa0176170 AT3G61880.1 31.423 471 294 14 27 483 58 513 3.65e-57 199
Msa0176170 AT3G61880.2 32.547 424 261 12 72 483 103 513 5.08e-57 199
Msa0176170 AT5G42590.1 29.202 476 310 9 11 470 3 467 7.47e-57 197
Msa0176170 AT4G15360.1 28.776 490 314 14 1 468 1 477 8.48e-57 197
Msa0176170 AT1G50520.1 29.336 467 302 13 47 491 52 512 1.00e-56 197
Msa0176170 AT2G14100.1 28.139 462 290 11 54 488 60 506 1.51e-56 196
Msa0176170 AT5G10610.1 28.157 483 312 13 5 470 1 465 1.63e-56 196
Msa0176170 AT3G48290.2 27.660 470 300 9 28 467 25 484 2.41e-56 196
Msa0176170 AT4G15350.1 28.440 436 288 10 50 469 48 475 3.19e-56 196
Msa0176170 AT4G15330.1 28.661 478 307 16 11 470 14 475 6.23e-56 195
Msa0176170 AT3G20940.1 27.869 488 322 13 18 488 25 499 8.26e-56 194
Msa0176170 AT5G24960.1 30.269 446 300 7 30 468 25 466 1.13e-55 194
Msa0176170 AT5G42580.1 28.199 422 278 9 58 469 60 466 1.36e-55 194
Msa0176170 AT3G32047.1 27.854 438 296 9 58 485 63 490 2.53e-55 193
Msa0176170 AT3G20950.1 26.962 497 327 14 5 477 7 491 1.11e-54 192
Msa0176170 AT1G66540.2 37.460 315 175 9 181 487 9 309 4.29e-54 185
Msa0176170 AT3G25180.1 27.975 479 321 9 5 464 1 474 1.25e-53 189
Msa0176170 AT3G26180.2 38.956 249 139 5 242 480 103 348 1.29e-53 185
Msa0176170 AT3G20090.2 28.704 432 273 10 59 469 65 482 1.63e-53 189
Msa0176170 AT5G36220.2 38.129 278 155 5 200 472 59 324 1.95e-53 184
Msa0176170 AT4G31950.1 29.098 488 299 12 10 466 4 475 2.06e-53 188
Msa0176170 AT1G50560.1 28.352 455 296 11 60 491 66 513 2.45e-53 188
Msa0176170 AT1G13100.1 29.412 442 278 9 69 490 56 483 3.93e-53 187
Msa0176170 AT3G20960.2 27.803 446 285 10 64 489 68 496 1.04e-52 186
Msa0176170 AT3G10560.1 27.484 473 317 13 10 465 17 480 1.13e-52 186
Msa0176170 AT5G04660.1 28.883 412 275 10 67 465 73 479 5.35e-52 184
Msa0176170 AT4G15380.1 26.471 442 301 9 64 488 69 503 1.19e-51 183
Msa0176170 AT5G47990.1 28.842 423 276 11 59 465 64 477 1.88e-51 182
Msa0176170 AT2G27000.1 27.064 436 296 10 48 469 52 479 1.90e-51 182
Msa0176170 AT5G09970.1 28.540 452 302 16 40 477 71 515 2.18e-51 183
Msa0176170 AT1G79370.1 28.081 495 319 14 11 470 13 505 2.25e-51 183
Msa0176170 AT3G20100.1 25.499 451 309 10 59 488 63 507 5.48e-51 181
Msa0176170 AT3G20080.2 27.716 451 301 10 35 468 39 481 8.59e-51 181
Msa0176170 AT3G20080.1 27.716 451 301 10 35 468 39 481 8.59e-51 181
Msa0176170 AT5G04630.1 27.637 474 315 15 10 465 13 476 9.32e-51 181
Msa0176170 AT3G20130.2 28.462 390 252 9 97 469 74 453 6.10e-50 178
Msa0176170 AT3G20120.4 26.754 456 299 14 59 490 63 507 2.33e-49 177
Msa0176170 AT3G10570.1 28.641 412 275 11 67 465 75 480 1.05e-48 175
Msa0176170 AT3G20110.1 26.866 469 321 12 14 469 12 471 1.06e-48 175
Msa0176170 AT2G22330.1 27.010 485 331 10 3 467 23 504 2.03e-48 175
Msa0176170 AT2G22330.2 27.664 488 324 12 3 467 46 527 3.05e-48 175
Msa0176170 AT5G05260.2 26.797 459 311 9 31 465 33 490 4.23e-48 174
Msa0176170 AT4G39950.1 26.819 481 329 9 7 467 25 502 1.32e-47 173
Msa0176170 AT1G28430.1 27.945 433 285 10 54 469 57 479 1.88e-47 172
Msa0176170 AT4G39950.2 26.819 481 329 9 7 467 65 542 2.61e-47 173
Msa0176170 AT3G20960.1 29.156 391 238 11 120 489 21 393 3.70e-47 169
Msa0176170 AT1G64940.1 26.939 490 320 13 8 472 8 484 8.11e-47 170
Msa0176170 AT1G11600.1 26.415 477 323 12 11 465 8 478 9.86e-47 170
Msa0176170 AT4G15330.2 30.854 363 221 14 125 470 98 447 3.84e-46 167
Msa0176170 AT1G58260.1 25.358 489 333 12 10 470 9 493 4.02e-46 169
Msa0176170 AT2G30490.1 25.180 417 299 5 59 464 55 469 4.86e-45 165
Msa0176170 AT4G13310.2 26.471 374 267 4 26 394 20 390 2.36e-44 160
Msa0176170 AT3G20090.1 30.447 358 214 10 133 469 1 344 3.08e-43 157
Msa0176170 AT5G05260.1 25.708 459 284 10 31 465 33 458 3.95e-42 157
Msa0176170 AT3G20120.2 27.895 380 243 12 133 490 1 371 4.10e-42 154
Msa0176170 AT3G20120.3 27.895 380 243 12 133 490 1 371 4.10e-42 154
Msa0176170 AT3G20120.1 27.895 380 243 12 133 490 1 371 4.10e-42 154
Msa0176170 AT1G16410.1 23.790 496 351 10 11 479 15 510 5.02e-42 157
Msa0176170 AT1G64930.1 27.601 471 295 16 34 472 28 484 1.15e-41 156
Msa0176170 AT2G27010.1 25.114 438 284 12 48 469 48 457 1.83e-41 155
Msa0176170 AT2G45560.2 30.263 304 199 5 5 296 1 303 3.92e-41 150
Msa0176170 AT5G25900.1 25.221 452 304 11 40 472 48 484 5.74e-40 151
Msa0176170 AT3G20080.4 28.531 354 225 9 133 468 1 344 1.48e-39 147
Msa0176170 AT3G20080.5 28.531 354 225 9 133 468 1 344 1.48e-39 147
Msa0176170 AT3G20080.6 28.531 354 225 9 133 468 1 344 1.48e-39 147
Msa0176170 AT3G20080.3 28.531 354 225 9 133 468 1 344 1.48e-39 147
Msa0176170 AT2G12190.1 26.866 469 310 14 30 472 24 485 1.57e-39 150
Msa0176170 AT3G20935.1 34.468 235 125 5 263 469 74 307 5.69e-39 145
Msa0176170 AT1G16400.1 24.800 500 336 12 24 490 30 522 7.91e-39 148
Msa0176170 AT1G64950.1 25.918 463 312 13 34 472 28 483 1.79e-38 147
Msa0176170 AT4G20240.1 26.396 394 279 7 37 424 32 420 5.27e-38 145
Msa0176170 AT3G03470.1 26.166 493 310 16 34 491 27 500 1.11e-37 145
Msa0176170 AT2G05180.1 25.134 374 257 8 59 419 63 426 4.80e-37 142
Msa0176170 AT2G45560.3 31.250 240 156 3 5 235 1 240 1.43e-35 133
Msa0176170 AT5G61320.1 28.471 425 255 14 70 472 66 463 1.74e-35 138
Msa0176170 AT2G25160.2 29.469 414 254 11 11 395 4 408 1.90e-34 134
Msa0176170 AT1G64900.1 26.667 420 285 9 70 472 66 479 8.38e-34 134
Msa0176170 AT3G53290.1 31.643 414 242 11 88 488 8 393 4.21e-33 130
Msa0176170 AT5G35917.1 25.542 415 269 9 31 421 35 433 1.03e-30 125
Msa0176170 AT4G20240.2 24.731 372 271 5 27 394 22 388 1.88e-29 120
Msa0176170 AT5G24960.2 26.415 371 264 5 30 395 25 391 2.07e-28 117
Msa0176170 AT2G45510.1 23.434 495 323 15 8 469 11 482 3.45e-27 115
Msa0176170 AT1G16410.2 23.000 400 287 8 11 389 15 414 5.93e-27 113
Msa0176170 AT3G53305.1 45.946 148 68 3 347 487 183 325 6.78e-27 111
Msa0176170 AT3G25180.2 25.195 385 265 8 5 371 1 380 3.10e-26 110
Msa0176170 AT2G44890.1 23.720 371 238 10 130 469 126 482 8.89e-25 107
Msa0176170 AT3G44970.1 24.947 473 311 17 18 472 10 456 5.94e-24 105
Msa0176170 AT3G26125.1 24.533 375 243 10 130 469 138 507 6.88e-23 102
Msa0176170 AT1G05160.2 27.517 298 185 9 183 469 189 466 2.03e-21 97.4
Msa0176170 AT1G05160.1 27.517 298 185 9 183 469 189 466 2.03e-21 97.4
Msa0176170 AT5G48000.2 22.489 458 306 15 33 472 30 456 7.31e-21 95.9
Msa0176170 AT5G48000.4 22.489 458 306 15 33 472 30 456 7.31e-21 95.9
Msa0176170 AT5G48000.7 22.489 458 306 15 33 472 30 456 7.31e-21 95.9
Msa0176170 AT5G48000.6 22.489 458 306 15 33 472 30 456 7.31e-21 95.9
Msa0176170 AT5G48000.5 22.489 458 306 15 33 472 30 456 7.31e-21 95.9
Msa0176170 AT5G48000.3 22.489 458 306 15 33 472 30 456 7.31e-21 95.9
Msa0176170 AT5G48000.1 22.489 458 306 15 33 472 71 497 8.07e-21 95.9
Msa0176170 AT3G19270.2 23.126 467 321 14 11 470 8 443 1.07e-20 95.1
Msa0176170 AT1G31800.1 32.632 190 121 5 292 477 365 551 1.68e-20 95.1
Msa0176170 AT2G44890.2 23.181 371 222 12 130 469 126 464 2.79e-20 94.0
Msa0176170 AT2G32440.2 28.378 296 180 10 163 448 169 442 5.07e-20 93.2
Msa0176170 AT2G32440.1 28.378 296 180 10 163 448 169 442 5.07e-20 93.2
Msa0176170 AT1G13140.1 23.306 369 243 10 130 467 138 497 7.34e-20 93.2
Msa0176170 AT4G39500.2 23.989 371 254 11 127 474 131 496 7.68e-20 92.8
Msa0176170 AT4G39500.1 23.989 371 254 11 127 474 81 446 1.02e-19 92.0
Msa0176170 AT4G15110.1 29.167 240 135 7 264 472 320 555 2.61e-19 91.7
Msa0176170 AT1G13150.1 23.967 363 234 11 130 460 131 483 2.76e-19 91.3
Msa0176170 AT5G52320.1 27.826 230 154 6 254 474 256 482 3.55e-19 90.9
Msa0176170 AT5G52320.2 27.826 230 154 6 254 474 256 482 4.47e-19 90.5
Msa0176170 AT5G05690.3 31.980 197 124 5 273 465 132 322 6.84e-19 88.6
Msa0176170 AT1G57750.1 25.683 366 240 14 129 473 123 477 8.56e-19 89.7
Msa0176170 AT5G05690.1 31.980 197 124 5 273 465 251 441 1.52e-18 88.6
Msa0176170 AT5G52400.1 31.132 212 139 6 255 464 283 489 1.68e-18 88.6
Msa0176170 AT5G38450.1 26.812 414 279 14 65 467 89 489 1.85e-18 88.6
Msa0176170 AT3G19270.1 22.944 462 318 14 11 465 8 438 3.15e-18 87.4
Msa0176170 AT1G65340.1 26.872 227 153 6 254 470 256 479 3.72e-18 87.8
Msa0176170 AT2G27690.1 28.910 211 140 5 260 464 255 461 4.40e-18 87.4
Msa0176170 AT3G53130.1 22.772 404 286 11 62 449 101 494 6.41e-18 87.0
Msa0176170 AT1G55940.2 30.631 222 137 8 258 467 251 467 7.73e-18 86.7
Msa0176170 AT1G78490.1 24.324 481 316 18 5 467 1 451 9.97e-18 86.3
Msa0176170 AT1G24540.1 25.738 237 162 4 250 472 262 498 1.24e-17 86.3
Msa0176170 AT4G32170.1 23.433 367 255 11 127 472 120 481 1.84e-17 85.5
Msa0176170 AT5G35920.1 33.333 138 82 3 358 485 6 143 2.28e-17 79.7
Msa0176170 AT3G50660.1 25.572 481 303 19 30 473 31 493 3.42e-17 84.7
Msa0176170 AT5G45340.2 23.975 488 286 18 5 463 1 432 4.70e-17 84.0
Msa0176170 AT5G08250.2 24.590 244 165 5 250 474 279 522 4.81e-17 84.3
Msa0176170 AT1G13140.2 27.700 213 139 5 270 467 259 471 5.27e-17 84.0
Msa0176170 AT1G55940.1 30.734 218 134 8 258 463 251 463 6.26e-17 83.6
Msa0176170 AT1G11680.1 29.630 216 143 5 270 477 254 468 6.61e-17 83.6
Msa0176170 AT3G61035.1 25.188 266 176 7 47 303 51 302 7.36e-17 82.0
Msa0176170 AT5G08250.1 24.590 244 165 5 250 474 217 460 8.34e-17 83.2
Msa0176170 AT3G14630.1 27.823 248 171 7 224 467 238 481 1.73e-16 82.4
Msa0176170 AT3G14630.2 27.823 248 171 7 224 467 293 536 1.77e-16 82.8
Msa0176170 AT4G39490.1 22.464 276 179 7 245 494 241 507 1.80e-16 82.4
Msa0176170 AT2G42850.1 28.070 171 113 4 301 467 293 457 2.17e-16 82.0
Msa0176170 AT4G00360.1 30.047 213 131 7 252 448 255 465 2.74e-16 82.0
Msa0176170 AT3G14620.1 28.899 218 148 6 253 467 275 488 4.45e-16 81.3
Msa0176170 AT4G39510.1 26.180 233 159 7 255 474 255 487 5.21e-16 80.9
Msa0176170 AT5G02900.1 26.316 190 132 5 290 472 268 456 5.49e-16 80.9
Msa0176170 AT1G47620.1 25.957 235 160 7 254 474 263 497 1.13e-15 80.1
Msa0176170 AT5G23190.1 25.620 242 162 6 250 474 282 522 1.43e-15 79.7
Msa0176170 AT1G63710.1 28.700 223 144 6 250 460 254 473 1.48e-15 79.7
Msa0176170 AT3G14610.1 26.267 217 154 5 255 467 271 485 1.70e-15 79.3
Msa0176170 AT3G13730.1 22.727 484 275 20 28 468 41 468 1.87e-15 79.3
Msa0176170 AT2G21910.1 29.412 204 134 7 279 473 285 487 2.67e-15 79.0
Msa0176170 AT1G12740.4 22.245 481 317 18 12 466 1 450 3.31e-15 78.2
Msa0176170 AT2G26710.1 31.361 169 113 3 301 467 321 488 5.32e-15 77.8
Msa0176170 AT4G36380.1 29.808 208 128 7 272 468 289 489 8.30e-15 77.4
Msa0176170 AT1G69500.1 25.221 226 140 3 271 467 271 496 9.73e-15 77.0
Msa0176170 AT1G67110.1 34.014 147 91 5 323 467 341 483 1.19e-14 76.6
Msa0176170 AT4G39480.1 24.370 238 162 6 255 474 256 493 1.87e-14 76.3
Msa0176170 AT3G14660.2 24.082 245 178 7 227 467 99 339 4.36e-14 74.3
Msa0176170 AT1G01600.1 30.841 214 130 8 252 448 255 467 5.27e-14 74.7
Msa0176170 AT1G57750.2 26.462 325 207 13 129 432 123 436 5.39e-14 74.3
Msa0176170 AT3G56630.1 28.936 235 147 11 239 463 242 466 8.76e-14 73.9
Msa0176170 AT2G23180.1 23.590 195 136 6 290 473 301 493 9.97e-14 73.9
Msa0176170 AT4G15300.2 21.503 479 317 18 14 470 7 448 1.16e-13 73.6
Msa0176170 AT3G14660.1 24.082 245 178 7 227 467 245 485 1.32e-13 73.6
Msa0176170 AT5G63450.2 20.968 496 334 16 3 463 57 529 1.42e-13 73.6
Msa0176170 AT3G14680.1 25.346 217 155 6 255 467 272 485 1.71e-13 73.2
Msa0176170 AT5G63450.1 20.850 494 333 16 5 463 1 471 2.22e-13 72.8
Msa0176170 AT5G58860.1 29.688 192 120 5 272 448 271 462 2.66e-13 72.4
Msa0176170 AT4G15300.3 21.489 470 314 17 19 470 6 438 4.15e-13 71.6
Msa0176170 AT1G34540.1 29.185 233 140 10 245 463 245 466 4.78e-13 71.6
Msa0176170 AT3G14650.1 23.963 217 158 6 255 467 272 485 7.34e-13 71.2
Msa0176170 AT5G24900.2 25.926 243 165 9 236 467 145 383 1.50e-12 69.7
Msa0176170 AT2G45970.1 29.474 190 115 7 276 448 277 464 1.52e-12 70.1
Msa0176170 AT2G29090.3 29.474 190 116 5 293 472 188 369 1.65e-12 69.3
Msa0176170 AT1G13090.1 24.910 277 173 7 32 290 22 281 1.70e-12 68.6
Msa0176170 AT3G14640.2 24.091 220 161 5 252 467 292 509 1.75e-12 70.1
Msa0176170 AT3G14640.1 24.091 220 161 5 252 467 270 487 1.89e-12 69.7
Msa0176170 AT2G29090.2 27.805 205 133 5 293 487 283 482 1.99e-12 69.7
Msa0176170 AT2G29090.1 27.805 205 133 5 293 487 283 482 1.99e-12 69.7
Msa0176170 AT5G24900.1 25.926 243 165 9 236 467 262 500 2.68e-12 69.3
Msa0176170 AT4G15300.1 23.902 205 145 6 272 470 261 460 1.26e-11 67.0
Msa0176170 AT3G14690.2 23.041 217 160 6 255 467 307 520 1.33e-11 67.4
Msa0176170 AT3G14690.1 23.041 217 160 6 255 467 272 485 1.51e-11 67.0
Msa0176170 AT3G50660.2 25.721 416 266 17 30 418 31 430 2.67e-11 65.9
Msa0176170 AT5G14400.1 27.273 209 120 6 269 473 163 343 2.86e-11 65.5
Msa0176170 AT5G14400.2 27.273 209 120 6 269 473 217 397 2.92e-11 65.9
Msa0176170 AT4G20235.1 39.744 78 45 2 394 469 255 332 5.51e-11 64.3
Msa0176170 AT3G30290.1 23.982 221 155 5 258 468 159 376 6.72e-11 64.7
Msa0176170 AT3G48520.1 21.818 220 156 5 253 464 258 469 8.71e-11 64.7

Find 91 sgRNAs with CRISPR-Local

Find 248 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCAATACTTCATATTGTTTA+GGG 0.250356 1_4:-62407144 None:intergenic
TTTGATTGGAAACTTGAAAA+TGG 0.250759 1_4:+62407068 Msa0176170:CDS
CACCTCTTTGGCAACATCTT+AGG 0.253021 1_4:+62405592 Msa0176170:CDS
ATCAATACTTCATATTGTTT+AGG 0.258025 1_4:-62407145 None:intergenic
GGAAAATGATCAGCAATATT+TGG 0.268596 1_4:-62405870 None:intergenic
ATCAGAACTTGTGCACCTTT+TGG 0.270042 1_4:-62406846 None:intergenic
TCCTCCGATGATTTCAGATA+TGG 0.280084 1_4:+62405206 None:intergenic
TTCTCTACCAAGACTCTTGA+TGG 0.280959 1_4:+62405636 Msa0176170:CDS
CATTGATCAACTCCTTTGAT+TGG 0.288696 1_4:+62407054 Msa0176170:CDS
TTTATCACTGCATTCAAGTA+TGG 0.289738 1_4:-62406738 None:intergenic
TTCAAAAGTGTTCTATGCTT+TGG 0.301447 1_4:+62405947 Msa0176170:CDS
TTCATATTGTTTAGGGCAAC+TGG 0.309875 1_4:-62407137 None:intergenic
TGTTGCCAAAGAGGTGAAAA+TGG 0.310336 1_4:-62405585 None:intergenic
CATAACTTAATGCGCATAAT+AGG 0.313177 1_4:-62405423 None:intergenic
TCTTAAGCTTAGTGAAGATT+TGG 0.319962 1_4:+62407187 Msa0176170:three_prime_UTR
TTGTGAGTTGTTGTGTTATC+AGG 0.332921 1_4:-62405534 None:intergenic
GCAAAGTTTGCTAAGGTCTA+TGG 0.338310 1_4:+62405399 Msa0176170:CDS
TTTCAATTATCATGTCTATA+TGG 0.342486 1_4:+62407312 Msa0176170:three_prime_UTR
CTGGCTCACCACTTGCTGTT+AGG 0.356556 1_4:+62407009 Msa0176170:CDS
CAGCTCCAATGTTGCTTCCT+AGG 0.358629 1_4:+62406784 Msa0176170:CDS
AAAATATTGTAATCATGTAT+TGG 0.363212 1_4:+62407350 Msa0176170:three_prime_UTR
TGCATTGTCATGTTCTTCAT+TGG 0.364623 1_4:+62405264 Msa0176170:CDS
TTGTCCAAGTTCATGTCCTT+TGG 0.377792 1_4:-62407098 None:intergenic
TGTTGGAAGAGCTGCTTTCA+AGG 0.399048 1_4:+62405740 Msa0176170:CDS
TTGAGGAATCAGATATTGAT+AGG 0.399841 1_4:+62406712 Msa0176170:CDS
AGGATGTTGCATTTGATGTT+GGG 0.400110 1_4:+62407029 Msa0176170:CDS
CTGATCAATGAATGGGCTAT+TGG 0.419393 1_4:+62406864 Msa0176170:CDS
ATGCATAAAAGTAGCATAAC+CGG 0.422743 1_4:+62405705 Msa0176170:CDS
TTAGTGAAGATTTGGTTTGA+TGG 0.432472 1_4:+62407195 Msa0176170:three_prime_UTR
CTAGAGGAAACCATTGGATT+AGG 0.441923 1_4:+62406681 Msa0176170:CDS
AAGATTTGGTTTGATGGATC+TGG 0.450581 1_4:+62407201 Msa0176170:three_prime_UTR
ACATCTACCCTTGCTTTCCT+AGG 0.450885 1_4:-62406801 None:intergenic
TAGGATGTTGCATTTGATGT+TGG 0.451329 1_4:+62407028 Msa0176170:CDS
CACAAGTTCTGATCAATGAA+TGG 0.452681 1_4:+62406856 Msa0176170:CDS
ATGTGATGATGAGATGATTA+TGG 0.455610 1_4:-62405457 None:intergenic
AATCATCTCATCATCACATA+TGG 0.458125 1_4:+62405461 Msa0176170:CDS
TGGATTAGGCAAAGCAATTG+AGG 0.468612 1_4:+62406695 Msa0176170:CDS
CTAGGAAGCAACATTGGAGC+TGG 0.474492 1_4:-62406783 None:intergenic
TGACATGCTAGACACCTTGT+TGG 0.476499 1_4:+62406028 Msa0176170:CDS
TTCCTAAGATGTTGCCAAAG+AGG 0.478700 1_4:-62405594 None:intergenic
TTTAATATTATAGTTTGAGT+TGG 0.480412 1_4:+62407271 Msa0176170:three_prime_UTR
TCCAACATCAACAGCTTCAC+CGG 0.481843 1_4:-62405724 None:intergenic
CTATTGGTAGAACAGACATA+TGG 0.484112 1_4:+62406880 Msa0176170:CDS
GGAACGGAGACATCGGCATA+TGG 0.485919 1_4:+62406594 Msa0176170:CDS
TAATAGGATCTGCTTGTGGC+GGG 0.487312 1_4:+62406573 Msa0176170:intron
CAAGGAAGATAACCAAAAGA+TGG 0.490354 1_4:+62406058 Msa0176170:CDS
CTTAAGATAATACATTGATC+TGG 0.496379 1_4:-62407171 None:intergenic
AAGCTTACACCGTTCGGTAG+TGG 0.505174 1_4:+62406972 Msa0176170:CDS
AATTGCTTTGCCTAATCCAA+TGG 0.507078 1_4:-62406691 None:intergenic
TGACAATGCATGTCAACAAA+AGG 0.511959 1_4:-62405251 None:intergenic
TTGACTTCCATCAAGAGTCT+TGG 0.512046 1_4:-62405643 None:intergenic
ATTTCAGATATGGATTATGT+TGG 0.514460 1_4:+62405216 Msa0176170:CDS
TTGGAAACTTGAAAATGGTA+TGG 0.515253 1_4:+62407073 Msa0176170:CDS
GGTTCTGAAATTGATGTCAA+AGG 0.515973 1_4:+62406939 Msa0176170:CDS
CTAACAGCAAGTGGTGAGCC+AGG 0.519026 1_4:-62407008 None:intergenic
GGATCTGCTTGTGGCGGGAA+CGG 0.519186 1_4:+62406578 Msa0176170:intron
GGAACCAAAGGACATGAACT+TGG 0.523493 1_4:+62407094 Msa0176170:CDS
AACACTTGCAAAGTTTGCTA+AGG 0.524211 1_4:+62405392 Msa0176170:CDS
CATCGGCATATGGATTAGAA+AGG 0.524755 1_4:+62406604 Msa0176170:CDS
TCTACTCTATTAAGTGCTGT+TGG 0.530508 1_4:+62405843 Msa0176170:CDS
GCTTTCCTAGGAAGCAACAT+TGG 0.531700 1_4:-62406789 None:intergenic
ACAAGTTCTGATCAATGAAT+GGG 0.537372 1_4:+62406857 Msa0176170:CDS
CACCTTGTTGGACATTTCCA+AGG 0.540528 1_4:+62406040 Msa0176170:CDS
GCAGGTTACACAATTCCAAA+AGG 0.542022 1_4:+62406831 Msa0176170:CDS
TATTGGTAGAACAGACATAT+GGG 0.545658 1_4:+62406881 Msa0176170:CDS
GTTGCCAAAGAGGTGAAAAT+GGG 0.550649 1_4:-62405584 None:intergenic
ATCGGCATATGGATTAGAAA+GGG 0.554187 1_4:+62406605 Msa0176170:CDS
GTGTGTCTTCTAATGCCTTG+TGG 0.556927 1_4:-62405912 None:intergenic
AGGGTAGATGTGGAAATAGC+AGG 0.559602 1_4:+62406813 Msa0176170:CDS
AGTGGAAGACGTATATGTCC+TGG 0.560991 1_4:+62406990 Msa0176170:CDS
AAAGAACTAGAGGAAACCAT+TGG 0.567096 1_4:+62406675 Msa0176170:CDS
ATTAAAATTATAAAATACAA+AGG 0.571748 1_4:-62407254 None:intergenic
TAATCCATATCTGAAATCAT+CGG 0.572460 1_4:-62405210 None:intergenic
TGTTGCTTCCTAGGAAAGCA+AGG 0.573347 1_4:+62406793 Msa0176170:CDS
GGGCAATGAGTGAAGTAGTA+CGG 0.573843 1_4:+62406625 Msa0176170:CDS
TAGGAAAGCAAGGGTAGATG+TGG 0.580642 1_4:+62406803 Msa0176170:CDS
TGCAACATCCTAACAGCAAG+TGG 0.583831 1_4:-62407017 None:intergenic
ACCGGTGAAGCTGTTGATGT+TGG 0.586642 1_4:+62405723 Msa0176170:CDS
GGAAGCAACATTGGAGCTGG+AGG 0.596596 1_4:-62406780 None:intergenic
TGAAAATGGTATGGAACCAA+AGG 0.598027 1_4:+62407082 Msa0176170:CDS
AAAAGCAAAGAAAGAACTAG+AGG 0.598344 1_4:+62406665 Msa0176170:CDS
TCGAACTACAAGCTTCCACC+AGG 0.603802 1_4:+62405312 Msa0176170:CDS
TGTGGCGGGAACGGAGACAT+CGG 0.604070 1_4:+62406587 Msa0176170:CDS
TTAATAGGATCTGCTTGTGG+CGG 0.618755 1_4:+62406572 Msa0176170:intron
GAAGCAACATTGGAGCTGGA+GGG 0.632234 1_4:-62406779 None:intergenic
AACTTTGCAAGTGTTTGTTG+TGG 0.637386 1_4:-62405384 None:intergenic
GCCAAAGAGGTGAAAATGGG+AGG 0.644896 1_4:-62405581 None:intergenic
TTCCTTGGAAATGTCCAACA+AGG 0.646999 1_4:-62406042 None:intergenic
GTTGCTTCCTAGGAAAGCAA+GGG 0.673834 1_4:+62406794 Msa0176170:CDS
TGAAGTAGTACGGCATCCAG+AGG 0.681999 1_4:+62406635 Msa0176170:CDS
ATACGTCTTCCACTACCGAA+CGG 0.707532 1_4:-62406981 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGAACACATTATATATT+TGG - chr1_4:62406504-62406523 None:intergenic 15.0%
!! TTTAATATTATAGTTTGAGT+TGG + chr1_4:62407271-62407290 Msa0176170:three_prime_UTR 15.0%
!! AAAATATTGTAATCATGTAT+TGG + chr1_4:62407350-62407369 Msa0176170:three_prime_UTR 15.0%
!! ATTTGAACACATTATATATT+TGG - chr1_4:62406504-62406523 None:intergenic 15.0%
!! TTTAATATTATAGTTTGAGT+TGG + chr1_4:62407271-62407290 Msa0176170:three_prime_UTR 15.0%
!! AAAATATTGTAATCATGTAT+TGG + chr1_4:62407350-62407369 Msa0176170:three_prime_UTR 15.0%
!! ATTAGTAAAAAGAATCTCTT+TGG - chr1_4:62405487-62405506 None:intergenic 20.0%
!! TCAATACTTCATATTGTTTA+GGG - chr1_4:62407147-62407166 None:intergenic 20.0%
!! ATCAATACTTCATATTGTTT+AGG - chr1_4:62407148-62407167 None:intergenic 20.0%
!! TTTCAATTATCATGTCTATA+TGG + chr1_4:62407312-62407331 Msa0176170:three_prime_UTR 20.0%
!! ATTAGTAAAAAGAATCTCTT+TGG - chr1_4:62405487-62405506 None:intergenic 20.0%
!! TCAATACTTCATATTGTTTA+GGG - chr1_4:62407147-62407166 None:intergenic 20.0%
!! ATCAATACTTCATATTGTTT+AGG - chr1_4:62407148-62407167 None:intergenic 20.0%
!! TTTCAATTATCATGTCTATA+TGG + chr1_4:62407312-62407331 Msa0176170:three_prime_UTR 20.0%
!! ATTTCAGATATGGATTATGT+TGG + chr1_4:62405216-62405235 Msa0176170:CDS 25.0%
! GAAAAACAATGTTGAAAATC+GGG - chr1_4:62406193-62406212 None:intergenic 25.0%
! GGAAAAACAATGTTGAAAAT+CGG - chr1_4:62406194-62406213 None:intergenic 25.0%
!! ACACGAGATGAATAATTTTT+AGG + chr1_4:62406231-62406250 Msa0176170:intron 25.0%
!! CACGAGATGAATAATTTTTA+GGG + chr1_4:62406232-62406251 Msa0176170:intron 25.0%
! TAAAAATTACGGAAATGCTA+AGG - chr1_4:62406388-62406407 None:intergenic 25.0%
!! GCATTTCCGTAATTTTTATA+TGG + chr1_4:62406390-62406409 Msa0176170:intron 25.0%
!!! GCGACTTTTGTAATTTTAAT+AGG + chr1_4:62406557-62406576 Msa0176170:intron 25.0%
!!! ATTTTCAAGTTTCCAATCAA+AGG - chr1_4:62407069-62407088 None:intergenic 25.0%
! TTTGATTGGAAACTTGAAAA+TGG + chr1_4:62407068-62407087 Msa0176170:CDS 25.0%
! CTTAAGATAATACATTGATC+TGG - chr1_4:62407174-62407193 None:intergenic 25.0%
!! ATTTCAGATATGGATTATGT+TGG + chr1_4:62405216-62405235 Msa0176170:CDS 25.0%
! GAAAAACAATGTTGAAAATC+GGG - chr1_4:62406193-62406212 None:intergenic 25.0%
! GGAAAAACAATGTTGAAAAT+CGG - chr1_4:62406194-62406213 None:intergenic 25.0%
!! ACACGAGATGAATAATTTTT+AGG + chr1_4:62406231-62406250 Msa0176170:intron 25.0%
!! CACGAGATGAATAATTTTTA+GGG + chr1_4:62406232-62406251 Msa0176170:intron 25.0%
! TAAAAATTACGGAAATGCTA+AGG - chr1_4:62406388-62406407 None:intergenic 25.0%
!! GCATTTCCGTAATTTTTATA+TGG + chr1_4:62406390-62406409 Msa0176170:intron 25.0%
!!! GCGACTTTTGTAATTTTAAT+AGG + chr1_4:62406557-62406576 Msa0176170:intron 25.0%
!!! ATTTTCAAGTTTCCAATCAA+AGG - chr1_4:62407069-62407088 None:intergenic 25.0%
! TTTGATTGGAAACTTGAAAA+TGG + chr1_4:62407068-62407087 Msa0176170:CDS 25.0%
! CTTAAGATAATACATTGATC+TGG - chr1_4:62407174-62407193 None:intergenic 25.0%
! GACATGATAGTGAAAAAAGA+AGG - chr1_4:62405339-62405358 None:intergenic 30.0%
CATAACTTAATGCGCATAAT+AGG - chr1_4:62405426-62405445 None:intergenic 30.0%
! ATGTGATGATGAGATGATTA+TGG - chr1_4:62405460-62405479 None:intergenic 30.0%
AATCATCTCATCATCACATA+TGG + chr1_4:62405461-62405480 Msa0176170:CDS 30.0%
ATGCATAAAAGTAGCATAAC+CGG + chr1_4:62405705-62405724 Msa0176170:CDS 30.0%
GGAAAATGATCAGCAATATT+TGG - chr1_4:62405873-62405892 None:intergenic 30.0%
! TTGAAGATTTTTGATCCACA+AGG + chr1_4:62405897-62405916 Msa0176170:CDS 30.0%
!! TTCAAAAGTGTTCTATGCTT+TGG + chr1_4:62405947-62405966 Msa0176170:CDS 30.0%
! TCTGTCTTTTATCCATCTTT+TGG - chr1_4:62406073-62406092 None:intergenic 30.0%
GTGTATGATTGCTCAAATAT+AGG - chr1_4:62406215-62406234 None:intergenic 30.0%
CCGTGTCCATATAAAAATTA+CGG - chr1_4:62406399-62406418 None:intergenic 30.0%
! CCGTAATTTTTATATGGACA+CGG + chr1_4:62406396-62406415 Msa0176170:intron 30.0%
!! ATTTTAATAGGATCTGCTTG+TGG + chr1_4:62406569-62406588 Msa0176170:intron 30.0%
AAAAGCAAAGAAAGAACTAG+AGG + chr1_4:62406665-62406684 Msa0176170:CDS 30.0%
TTGAGGAATCAGATATTGAT+AGG + chr1_4:62406712-62406731 Msa0176170:CDS 30.0%
TTTATCACTGCATTCAAGTA+TGG - chr1_4:62406741-62406760 None:intergenic 30.0%
! ACAAGTTCTGATCAATGAAT+GGG + chr1_4:62406857-62406876 Msa0176170:CDS 30.0%
TATTGGTAGAACAGACATAT+GGG + chr1_4:62406881-62406900 Msa0176170:CDS 30.0%
! TTTTCACCGGAAAGATTTTT+GGG + chr1_4:62406918-62406937 Msa0176170:CDS 30.0%
TTGGAAACTTGAAAATGGTA+TGG + chr1_4:62407073-62407092 Msa0176170:CDS 30.0%
TCTTAAGCTTAGTGAAGATT+TGG + chr1_4:62407187-62407206 Msa0176170:three_prime_UTR 30.0%
!! TTAGTGAAGATTTGGTTTGA+TGG + chr1_4:62407195-62407214 Msa0176170:three_prime_UTR 30.0%
! GACATGATAGTGAAAAAAGA+AGG - chr1_4:62405339-62405358 None:intergenic 30.0%
CATAACTTAATGCGCATAAT+AGG - chr1_4:62405426-62405445 None:intergenic 30.0%
! ATGTGATGATGAGATGATTA+TGG - chr1_4:62405460-62405479 None:intergenic 30.0%
AATCATCTCATCATCACATA+TGG + chr1_4:62405461-62405480 Msa0176170:CDS 30.0%
ATGCATAAAAGTAGCATAAC+CGG + chr1_4:62405705-62405724 Msa0176170:CDS 30.0%
GGAAAATGATCAGCAATATT+TGG - chr1_4:62405873-62405892 None:intergenic 30.0%
! TTGAAGATTTTTGATCCACA+AGG + chr1_4:62405897-62405916 Msa0176170:CDS 30.0%
!! TTCAAAAGTGTTCTATGCTT+TGG + chr1_4:62405947-62405966 Msa0176170:CDS 30.0%
! TCTGTCTTTTATCCATCTTT+TGG - chr1_4:62406073-62406092 None:intergenic 30.0%
GTGTATGATTGCTCAAATAT+AGG - chr1_4:62406215-62406234 None:intergenic 30.0%
CCGTGTCCATATAAAAATTA+CGG - chr1_4:62406399-62406418 None:intergenic 30.0%
! CCGTAATTTTTATATGGACA+CGG + chr1_4:62406396-62406415 Msa0176170:intron 30.0%
!! ATTTTAATAGGATCTGCTTG+TGG + chr1_4:62406569-62406588 Msa0176170:intron 30.0%
AAAAGCAAAGAAAGAACTAG+AGG + chr1_4:62406665-62406684 Msa0176170:CDS 30.0%
TTGAGGAATCAGATATTGAT+AGG + chr1_4:62406712-62406731 Msa0176170:CDS 30.0%
TTTATCACTGCATTCAAGTA+TGG - chr1_4:62406741-62406760 None:intergenic 30.0%
! ACAAGTTCTGATCAATGAAT+GGG + chr1_4:62406857-62406876 Msa0176170:CDS 30.0%
TATTGGTAGAACAGACATAT+GGG + chr1_4:62406881-62406900 Msa0176170:CDS 30.0%
! TTTTCACCGGAAAGATTTTT+GGG + chr1_4:62406918-62406937 Msa0176170:CDS 30.0%
TTGGAAACTTGAAAATGGTA+TGG + chr1_4:62407073-62407092 Msa0176170:CDS 30.0%
TCTTAAGCTTAGTGAAGATT+TGG + chr1_4:62407187-62407206 Msa0176170:three_prime_UTR 30.0%
!! TTAGTGAAGATTTGGTTTGA+TGG + chr1_4:62407195-62407214 Msa0176170:three_prime_UTR 30.0%
TGACAATGCATGTCAACAAA+AGG - chr1_4:62405254-62405273 None:intergenic 35.0%
TGCATTGTCATGTTCTTCAT+TGG + chr1_4:62405264-62405283 Msa0176170:CDS 35.0%
ATAGTGAAAAAAGAAGGTCC+TGG - chr1_4:62405333-62405352 None:intergenic 35.0%
! AACTTTGCAAGTGTTTGTTG+TGG - chr1_4:62405387-62405406 None:intergenic 35.0%
!! AACACTTGCAAAGTTTGCTA+AGG + chr1_4:62405392-62405411 Msa0176170:CDS 35.0%
TTGTGAGTTGTTGTGTTATC+AGG - chr1_4:62405537-62405556 None:intergenic 35.0%
! TCTACTCTATTAAGTGCTGT+TGG + chr1_4:62405843-62405862 Msa0176170:CDS 35.0%
GGATCAAAAATCTTCAACAC+TGG - chr1_4:62405894-62405913 None:intergenic 35.0%
!! CATCTTTTGGTTATCTTCCT+TGG - chr1_4:62406060-62406079 None:intergenic 35.0%
CAAGGAAGATAACCAAAAGA+TGG + chr1_4:62406058-62406077 Msa0176170:CDS 35.0%
! ACGGATTTAGACACATCTTT+TGG + chr1_4:62406415-62406434 Msa0176170:intron 35.0%
!! ATCGGCATATGGATTAGAAA+GGG + chr1_4:62406605-62406624 Msa0176170:CDS 35.0%
!! TTTGCTTTTGACATAACCTC+TGG - chr1_4:62406654-62406673 None:intergenic 35.0%
AAAGAACTAGAGGAAACCAT+TGG + chr1_4:62406675-62406694 Msa0176170:CDS 35.0%
AATTGCTTTGCCTAATCCAA+TGG - chr1_4:62406694-62406713 None:intergenic 35.0%
! CACAAGTTCTGATCAATGAA+TGG + chr1_4:62406856-62406875 Msa0176170:CDS 35.0%
CTATTGGTAGAACAGACATA+TGG + chr1_4:62406880-62406899 Msa0176170:CDS 35.0%
!! TGATGCTCATTTGTTTTCAC+CGG + chr1_4:62406905-62406924 Msa0176170:CDS 35.0%
! GTTTTCACCGGAAAGATTTT+TGG + chr1_4:62406917-62406936 Msa0176170:CDS 35.0%
TCAGAACCCAAAAATCTTTC+CGG - chr1_4:62406927-62406946 None:intergenic 35.0%
!! GGTTCTGAAATTGATGTCAA+AGG + chr1_4:62406939-62406958 Msa0176170:CDS 35.0%
! CATTTTAAGCTTACACCGTT+CGG + chr1_4:62406966-62406985 Msa0176170:CDS 35.0%
TAGGATGTTGCATTTGATGT+TGG + chr1_4:62407028-62407047 Msa0176170:CDS 35.0%
AGGATGTTGCATTTGATGTT+GGG + chr1_4:62407029-62407048 Msa0176170:CDS 35.0%
CATTGATCAACTCCTTTGAT+TGG + chr1_4:62407054-62407073 Msa0176170:CDS 35.0%
TGAAAATGGTATGGAACCAA+AGG + chr1_4:62407082-62407101 Msa0176170:CDS 35.0%
! TTCATATTGTTTAGGGCAAC+TGG - chr1_4:62407140-62407159 None:intergenic 35.0%
!! AAGATTTGGTTTGATGGATC+TGG + chr1_4:62407201-62407220 Msa0176170:three_prime_UTR 35.0%
TGACAATGCATGTCAACAAA+AGG - chr1_4:62405254-62405273 None:intergenic 35.0%
TGCATTGTCATGTTCTTCAT+TGG + chr1_4:62405264-62405283 Msa0176170:CDS 35.0%
ATAGTGAAAAAAGAAGGTCC+TGG - chr1_4:62405333-62405352 None:intergenic 35.0%
! AACTTTGCAAGTGTTTGTTG+TGG - chr1_4:62405387-62405406 None:intergenic 35.0%
!! AACACTTGCAAAGTTTGCTA+AGG + chr1_4:62405392-62405411 Msa0176170:CDS 35.0%
TTGTGAGTTGTTGTGTTATC+AGG - chr1_4:62405537-62405556 None:intergenic 35.0%
! TCTACTCTATTAAGTGCTGT+TGG + chr1_4:62405843-62405862 Msa0176170:CDS 35.0%
GGATCAAAAATCTTCAACAC+TGG - chr1_4:62405894-62405913 None:intergenic 35.0%
!! CATCTTTTGGTTATCTTCCT+TGG - chr1_4:62406060-62406079 None:intergenic 35.0%
CAAGGAAGATAACCAAAAGA+TGG + chr1_4:62406058-62406077 Msa0176170:CDS 35.0%
! ACGGATTTAGACACATCTTT+TGG + chr1_4:62406415-62406434 Msa0176170:intron 35.0%
!! ATCGGCATATGGATTAGAAA+GGG + chr1_4:62406605-62406624 Msa0176170:CDS 35.0%
!! TTTGCTTTTGACATAACCTC+TGG - chr1_4:62406654-62406673 None:intergenic 35.0%
AAAGAACTAGAGGAAACCAT+TGG + chr1_4:62406675-62406694 Msa0176170:CDS 35.0%
AATTGCTTTGCCTAATCCAA+TGG - chr1_4:62406694-62406713 None:intergenic 35.0%
! CACAAGTTCTGATCAATGAA+TGG + chr1_4:62406856-62406875 Msa0176170:CDS 35.0%
CTATTGGTAGAACAGACATA+TGG + chr1_4:62406880-62406899 Msa0176170:CDS 35.0%
!! TGATGCTCATTTGTTTTCAC+CGG + chr1_4:62406905-62406924 Msa0176170:CDS 35.0%
! GTTTTCACCGGAAAGATTTT+TGG + chr1_4:62406917-62406936 Msa0176170:CDS 35.0%
TCAGAACCCAAAAATCTTTC+CGG - chr1_4:62406927-62406946 None:intergenic 35.0%
!! GGTTCTGAAATTGATGTCAA+AGG + chr1_4:62406939-62406958 Msa0176170:CDS 35.0%
! CATTTTAAGCTTACACCGTT+CGG + chr1_4:62406966-62406985 Msa0176170:CDS 35.0%
TAGGATGTTGCATTTGATGT+TGG + chr1_4:62407028-62407047 Msa0176170:CDS 35.0%
AGGATGTTGCATTTGATGTT+GGG + chr1_4:62407029-62407048 Msa0176170:CDS 35.0%
CATTGATCAACTCCTTTGAT+TGG + chr1_4:62407054-62407073 Msa0176170:CDS 35.0%
TGAAAATGGTATGGAACCAA+AGG + chr1_4:62407082-62407101 Msa0176170:CDS 35.0%
! TTCATATTGTTTAGGGCAAC+TGG - chr1_4:62407140-62407159 None:intergenic 35.0%
!! AAGATTTGGTTTGATGGATC+TGG + chr1_4:62407201-62407220 Msa0176170:three_prime_UTR 35.0%
!! GCAAAGTTTGCTAAGGTCTA+TGG + chr1_4:62405399-62405418 Msa0176170:CDS 40.0%
GTTGCCAAAGAGGTGAAAAT+GGG - chr1_4:62405587-62405606 None:intergenic 40.0%
TGTTGCCAAAGAGGTGAAAA+TGG - chr1_4:62405588-62405607 None:intergenic 40.0%
TTCCTAAGATGTTGCCAAAG+AGG - chr1_4:62405597-62405616 None:intergenic 40.0%
TTCTCTACCAAGACTCTTGA+TGG + chr1_4:62405636-62405655 Msa0176170:CDS 40.0%
TTGACTTCCATCAAGAGTCT+TGG - chr1_4:62405646-62405665 None:intergenic 40.0%
TTCCTTGGAAATGTCCAACA+AGG - chr1_4:62406045-62406064 None:intergenic 40.0%
TTAATAGGATCTGCTTGTGG+CGG + chr1_4:62406572-62406591 Msa0176170:intron 40.0%
!! CATCGGCATATGGATTAGAA+AGG + chr1_4:62406604-62406623 Msa0176170:CDS 40.0%
CTAGAGGAAACCATTGGATT+AGG + chr1_4:62406681-62406700 Msa0176170:CDS 40.0%
! TGGATTAGGCAAAGCAATTG+AGG + chr1_4:62406695-62406714 Msa0176170:CDS 40.0%
GCAGGTTACACAATTCCAAA+AGG + chr1_4:62406831-62406850 Msa0176170:CDS 40.0%
! ATCAGAACTTGTGCACCTTT+TGG - chr1_4:62406849-62406868 None:intergenic 40.0%
!! CTGATCAATGAATGGGCTAT+TGG + chr1_4:62406864-62406883 Msa0176170:CDS 40.0%
TTGTCCAAGTTCATGTCCTT+TGG - chr1_4:62407101-62407120 None:intergenic 40.0%
!! GCAAAGTTTGCTAAGGTCTA+TGG + chr1_4:62405399-62405418 Msa0176170:CDS 40.0%
GTTGCCAAAGAGGTGAAAAT+GGG - chr1_4:62405587-62405606 None:intergenic 40.0%
TGTTGCCAAAGAGGTGAAAA+TGG - chr1_4:62405588-62405607 None:intergenic 40.0%
TTCCTAAGATGTTGCCAAAG+AGG - chr1_4:62405597-62405616 None:intergenic 40.0%
TTCTCTACCAAGACTCTTGA+TGG + chr1_4:62405636-62405655 Msa0176170:CDS 40.0%
TTGACTTCCATCAAGAGTCT+TGG - chr1_4:62405646-62405665 None:intergenic 40.0%
TTCCTTGGAAATGTCCAACA+AGG - chr1_4:62406045-62406064 None:intergenic 40.0%
TTAATAGGATCTGCTTGTGG+CGG + chr1_4:62406572-62406591 Msa0176170:intron 40.0%
!! CATCGGCATATGGATTAGAA+AGG + chr1_4:62406604-62406623 Msa0176170:CDS 40.0%
CTAGAGGAAACCATTGGATT+AGG + chr1_4:62406681-62406700 Msa0176170:CDS 40.0%
! TGGATTAGGCAAAGCAATTG+AGG + chr1_4:62406695-62406714 Msa0176170:CDS 40.0%
GCAGGTTACACAATTCCAAA+AGG + chr1_4:62406831-62406850 Msa0176170:CDS 40.0%
! ATCAGAACTTGTGCACCTTT+TGG - chr1_4:62406849-62406868 None:intergenic 40.0%
!! CTGATCAATGAATGGGCTAT+TGG + chr1_4:62406864-62406883 Msa0176170:CDS 40.0%
TTGTCCAAGTTCATGTCCTT+TGG - chr1_4:62407101-62407120 None:intergenic 40.0%
GTGAAAAAAGAAGGTCCTGG+TGG - chr1_4:62405330-62405349 None:intergenic 45.0%
! TCCTCCCATTTTCACCTCTT+TGG + chr1_4:62405580-62405599 Msa0176170:CDS 45.0%
CACCTCTTTGGCAACATCTT+AGG + chr1_4:62405592-62405611 Msa0176170:CDS 45.0%
TCCAACATCAACAGCTTCAC+CGG - chr1_4:62405727-62405746 None:intergenic 45.0%
! TGTTGGAAGAGCTGCTTTCA+AGG + chr1_4:62405740-62405759 Msa0176170:CDS 45.0%
GTGTGTCTTCTAATGCCTTG+TGG - chr1_4:62405915-62405934 None:intergenic 45.0%
TGACATGCTAGACACCTTGT+TGG + chr1_4:62406028-62406047 Msa0176170:CDS 45.0%
CACCTTGTTGGACATTTCCA+AGG + chr1_4:62406040-62406059 Msa0176170:CDS 45.0%
TTACTACCTTAACCAGTGCC+CGG - chr1_4:62406276-62406295 None:intergenic 45.0%
TAATAGGATCTGCTTGTGGC+GGG + chr1_4:62406573-62406592 Msa0176170:intron 45.0%
GGGCAATGAGTGAAGTAGTA+CGG + chr1_4:62406625-62406644 Msa0176170:CDS 45.0%
GCTTTCCTAGGAAGCAACAT+TGG - chr1_4:62406792-62406811 None:intergenic 45.0%
! TGTTGCTTCCTAGGAAAGCA+AGG + chr1_4:62406793-62406812 Msa0176170:CDS 45.0%
GTTGCTTCCTAGGAAAGCAA+GGG + chr1_4:62406794-62406813 Msa0176170:CDS 45.0%
ACATCTACCCTTGCTTTCCT+AGG - chr1_4:62406804-62406823 None:intergenic 45.0%
TAGGAAAGCAAGGGTAGATG+TGG + chr1_4:62406803-62406822 Msa0176170:CDS 45.0%
AGGGTAGATGTGGAAATAGC+AGG + chr1_4:62406813-62406832 Msa0176170:CDS 45.0%
ATACGTCTTCCACTACCGAA+CGG - chr1_4:62406984-62407003 None:intergenic 45.0%
AGTGGAAGACGTATATGTCC+TGG + chr1_4:62406990-62407009 Msa0176170:CDS 45.0%
TGCAACATCCTAACAGCAAG+TGG - chr1_4:62407020-62407039 None:intergenic 45.0%
GGAACCAAAGGACATGAACT+TGG + chr1_4:62407094-62407113 Msa0176170:CDS 45.0%
GTGAAAAAAGAAGGTCCTGG+TGG - chr1_4:62405330-62405349 None:intergenic 45.0%
! TCCTCCCATTTTCACCTCTT+TGG + chr1_4:62405580-62405599 Msa0176170:CDS 45.0%
CACCTCTTTGGCAACATCTT+AGG + chr1_4:62405592-62405611 Msa0176170:CDS 45.0%
TCCAACATCAACAGCTTCAC+CGG - chr1_4:62405727-62405746 None:intergenic 45.0%
! TGTTGGAAGAGCTGCTTTCA+AGG + chr1_4:62405740-62405759 Msa0176170:CDS 45.0%
GTGTGTCTTCTAATGCCTTG+TGG - chr1_4:62405915-62405934 None:intergenic 45.0%
TGACATGCTAGACACCTTGT+TGG + chr1_4:62406028-62406047 Msa0176170:CDS 45.0%
CACCTTGTTGGACATTTCCA+AGG + chr1_4:62406040-62406059 Msa0176170:CDS 45.0%
TTACTACCTTAACCAGTGCC+CGG - chr1_4:62406276-62406295 None:intergenic 45.0%
TAATAGGATCTGCTTGTGGC+GGG + chr1_4:62406573-62406592 Msa0176170:intron 45.0%
GGGCAATGAGTGAAGTAGTA+CGG + chr1_4:62406625-62406644 Msa0176170:CDS 45.0%
GCTTTCCTAGGAAGCAACAT+TGG - chr1_4:62406792-62406811 None:intergenic 45.0%
! TGTTGCTTCCTAGGAAAGCA+AGG + chr1_4:62406793-62406812 Msa0176170:CDS 45.0%
GTTGCTTCCTAGGAAAGCAA+GGG + chr1_4:62406794-62406813 Msa0176170:CDS 45.0%
ACATCTACCCTTGCTTTCCT+AGG - chr1_4:62406804-62406823 None:intergenic 45.0%
TAGGAAAGCAAGGGTAGATG+TGG + chr1_4:62406803-62406822 Msa0176170:CDS 45.0%
AGGGTAGATGTGGAAATAGC+AGG + chr1_4:62406813-62406832 Msa0176170:CDS 45.0%
ATACGTCTTCCACTACCGAA+CGG - chr1_4:62406984-62407003 None:intergenic 45.0%
AGTGGAAGACGTATATGTCC+TGG + chr1_4:62406990-62407009 Msa0176170:CDS 45.0%
TGCAACATCCTAACAGCAAG+TGG - chr1_4:62407020-62407039 None:intergenic 45.0%
GGAACCAAAGGACATGAACT+TGG + chr1_4:62407094-62407113 Msa0176170:CDS 45.0%
!! ATTAAAATTATAAAATACAA+AGG - chr1_4:62407257-62407276 None:intergenic 5.0%
!! ATTAAAATTATAAAATACAA+AGG - chr1_4:62407257-62407276 None:intergenic 5.0%
TCGAACTACAAGCTTCCACC+AGG + chr1_4:62405312-62405331 Msa0176170:CDS 50.0%
GCCAAAGAGGTGAAAATGGG+AGG - chr1_4:62405584-62405603 None:intergenic 50.0%
ACCGGTGAAGCTGTTGATGT+TGG + chr1_4:62405723-62405742 Msa0176170:CDS 50.0%
GACGTGTTAACTAGTGCTCC+CGG + chr1_4:62406254-62406273 Msa0176170:intron 50.0%
ACGTGTTAACTAGTGCTCCC+GGG + chr1_4:62406255-62406274 Msa0176170:intron 50.0%
TACTACCTTAACCAGTGCCC+GGG - chr1_4:62406275-62406294 None:intergenic 50.0%
TGAAGTAGTACGGCATCCAG+AGG + chr1_4:62406635-62406654 Msa0176170:CDS 50.0%
GAAGCAACATTGGAGCTGGA+GGG - chr1_4:62406782-62406801 None:intergenic 50.0%
CTAGGAAGCAACATTGGAGC+TGG - chr1_4:62406786-62406805 None:intergenic 50.0%
! CAGCTCCAATGTTGCTTCCT+AGG + chr1_4:62406784-62406803 Msa0176170:CDS 50.0%
AAGCTTACACCGTTCGGTAG+TGG + chr1_4:62406972-62406991 Msa0176170:CDS 50.0%
TCGAACTACAAGCTTCCACC+AGG + chr1_4:62405312-62405331 Msa0176170:CDS 50.0%
GCCAAAGAGGTGAAAATGGG+AGG - chr1_4:62405584-62405603 None:intergenic 50.0%
ACCGGTGAAGCTGTTGATGT+TGG + chr1_4:62405723-62405742 Msa0176170:CDS 50.0%
GACGTGTTAACTAGTGCTCC+CGG + chr1_4:62406254-62406273 Msa0176170:intron 50.0%
ACGTGTTAACTAGTGCTCCC+GGG + chr1_4:62406255-62406274 Msa0176170:intron 50.0%
TACTACCTTAACCAGTGCCC+GGG - chr1_4:62406275-62406294 None:intergenic 50.0%
TGAAGTAGTACGGCATCCAG+AGG + chr1_4:62406635-62406654 Msa0176170:CDS 50.0%
GAAGCAACATTGGAGCTGGA+GGG - chr1_4:62406782-62406801 None:intergenic 50.0%
CTAGGAAGCAACATTGGAGC+TGG - chr1_4:62406786-62406805 None:intergenic 50.0%
! CAGCTCCAATGTTGCTTCCT+AGG + chr1_4:62406784-62406803 Msa0176170:CDS 50.0%
AAGCTTACACCGTTCGGTAG+TGG + chr1_4:62406972-62406991 Msa0176170:CDS 50.0%
GGAACGGAGACATCGGCATA+TGG + chr1_4:62406594-62406613 Msa0176170:CDS 55.0%
GGAAGCAACATTGGAGCTGG+AGG - chr1_4:62406783-62406802 None:intergenic 55.0%
CTAACAGCAAGTGGTGAGCC+AGG - chr1_4:62407011-62407030 None:intergenic 55.0%
!! CTGGCTCACCACTTGCTGTT+AGG + chr1_4:62407009-62407028 Msa0176170:CDS 55.0%
GGAACGGAGACATCGGCATA+TGG + chr1_4:62406594-62406613 Msa0176170:CDS 55.0%
GGAAGCAACATTGGAGCTGG+AGG - chr1_4:62406783-62406802 None:intergenic 55.0%
CTAACAGCAAGTGGTGAGCC+AGG - chr1_4:62407011-62407030 None:intergenic 55.0%
!! CTGGCTCACCACTTGCTGTT+AGG + chr1_4:62407009-62407028 Msa0176170:CDS 55.0%
TAACTAGTGCTCCCGGGCAC+TGG + chr1_4:62406261-62406280 Msa0176170:intron 60.0%
! GGATCTGCTTGTGGCGGGAA+CGG + chr1_4:62406578-62406597 Msa0176170:intron 60.0%
! TGTGGCGGGAACGGAGACAT+CGG + chr1_4:62406587-62406606 Msa0176170:CDS 60.0%
TAACTAGTGCTCCCGGGCAC+TGG + chr1_4:62406261-62406280 Msa0176170:intron 60.0%
! GGATCTGCTTGTGGCGGGAA+CGG + chr1_4:62406578-62406597 Msa0176170:intron 60.0%
! TGTGGCGGGAACGGAGACAT+CGG + chr1_4:62406587-62406606 Msa0176170:CDS 60.0%
!! GTGCTCCCGGGCACTGGTTA+AGG + chr1_4:62406267-62406286 Msa0176170:intron 65.0%
!! GTGCTCCCGGGCACTGGTTA+AGG + chr1_4:62406267-62406286 Msa0176170:intron 65.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 62405213 62407384 62405213 ID=Msa0176170;Name=Msa0176170
chr1_4 mRNA 62405213 62407384 62405213 ID=Msa0176170-mRNA-1;Parent=Msa0176170;Name=Msa0176170-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|1|0.5|1|1|1|2|218|494
chr1_4 exon 62405213 62406109 62405213 ID=Msa0176170-mRNA-1:exon:20064;Parent=Msa0176170-mRNA-1
chr1_4 exon 62406579 62407384 62406579 ID=Msa0176170-mRNA-1:exon:20065;Parent=Msa0176170-mRNA-1
chr1_4 CDS 62405213 62406109 62405213 ID=Msa0176170-mRNA-1:cds;Parent=Msa0176170-mRNA-1
chr1_4 CDS 62406579 62407166 62406579 ID=Msa0176170-mRNA-1:cds;Parent=Msa0176170-mRNA-1
chr1_4 three_prime_UTR 62407167 62407384 62407167 ID=Msa0176170-mRNA-1:three_prime_utr;Parent=Msa0176170-mRNA-1
Gene Sequence

>Msa0176170

ATGATTTCAGATATGGATTATGTTGGTAGTGTTATGCTCCTTTTGTTGACATGCATTGTCATGTTCTTCATTGGTTCACTACATGCAAGAAGCAAAAAATCGAACTACAAGCTTCCACCAGGACCTTCTTTTTTCACTATCATGTCACATGTTGTTGAATTGTACAACAAGCCACAACAAACACTTGCAAAGTTTGCTAAGGTCTATGGTCCTATTATGCGCATTAAGTTATGCACAGAAACTACCATAATCATCTCATCATCACATATGGCCAAAGAGATTCTTTTTACTAATGATTCATTGTTCACTGATAGATCTGTTCCTGATAACACAACAACTCACAATCACAACAATTTTAGCTTAGTTTTCCTCCCATTTTCACCTCTTTGGCAACATCTTAGGAAAATATGTCATAATAATTTATTCTCTACCAAGACTCTTGATGGAAGTCAAGAACTTAGACGTATGAAACTCAAAGATCTTCTCAATGATATGCATAAAAGTAGCATAACCGGTGAAGCTGTTGATGTTGGAAGAGCTGCTTTCAAGGCTTGCATTAATTTTTTGTCATATACTTTTGTGTCTCAAGATTTTGTTGAGAATTTAGATGATGAATATAAAAATATAGTGTCTACTCTATTAAGTGCTGTTGGAACACCAAATATTGCTGATCATTTTCCAGTGTTGAAGATTTTTGATCCACAAGGCATTAGAAGACACACTACTCTTTATGTTTCAAAAGTGTTCTATGCTTTGGATATCATAATTGATAAACGAATGAAGATGAGACAAAGTGAACAATATGTCTCAAAAAATGACATGCTAGACACCTTGTTGGACATTTCCAAGGAAGATAACCAAAAGATGGATAAAAGACAGATTAAGCATCTACTACTTGATCTGCTTGTGGCGGGAACGGAGACATCGGCATATGGATTAGAAAGGGCAATGAGTGAAGTAGTACGGCATCCAGAGGTTATGTCAAAAGCAAAGAAAGAACTAGAGGAAACCATTGGATTAGGCAAAGCAATTGAGGAATCAGATATTGATAGGCTTCCATACTTGAATGCAGTGATAAAAGAGAGTTTACGTTTACACCCTCCAGCTCCAATGTTGCTTCCTAGGAAAGCAAGGGTAGATGTGGAAATAGCAGGTTACACAATTCCAAAAGGTGCACAAGTTCTGATCAATGAATGGGCTATTGGTAGAACAGACATATGGGATGATGCTCATTTGTTTTCACCGGAAAGATTTTTGGGTTCTGAAATTGATGTCAAAGGTCGACATTTTAAGCTTACACCGTTCGGTAGTGGAAGACGTATATGTCCTGGCTCACCACTTGCTGTTAGGATGTTGCATTTGATGTTGGGATCATTGATCAACTCCTTTGATTGGAAACTTGAAAATGGTATGGAACCAAAGGACATGAACTTGGACAAACAACTAAGAGCTATTCCAGTTGCCCTAAACAATATGAAGTATTGA
Protein sequence

>Msa0176170

MISDMDYVGSVMLLLLTCIVMFFIGSLHARSKKSNYKLPPGPSFFTIMSHVVELYNKPQQTLAKFAKVYGPIMRIKLCTETTIIISSSHMAKEILFTNDSLFTDRSVPDNTTTHNHNNFSLVFLPFSPLWQHLRKICHNNLFSTKTLDGSQELRRMKLKDLLNDMHKSSITGEAVDVGRAAFKACINFLSYTFVSQDFVENLDDEYKNIVSTLLSAVGTPNIADHFPVLKIFDPQGIRRHTTLYVSKVFYALDIIIDKRMKMRQSEQYVSKNDMLDTLLDISKEDNQKMDKRQIKHLLLDLLVAGTETSAYGLERAMSEVVRHPEVMSKAKKELEETIGLGKAIEESDIDRLPYLNAVIKESLRLHPPAPMLLPRKARVDVEIAGYTIPKGAQVLINEWAIGRTDIWDDAHLFSPERFLGSEIDVKGRHFKLTPFGSGRRICPGSPLAVRMLHLMLGSLINSFDWKLENGMEPKDMNLDKQLRAIPVALNNMKY*