AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0163930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0163930 MtrunA17_Chr1g0179151 98.016 504 10 0 1 504 1 504 0.0 1006
Msa0163930 MtrunA17_Chr7g0265901 51.789 531 173 16 2 504 1 476 2.08e-143 420
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0163930 AT5G03670.1 40.775 542 250 21 2 502 1 512 1.10e-81 263
Msa0163930 AT5G03670.2 40.811 370 167 15 2 335 1 354 3.60e-48 172
Msa0163930 AT2G36420.1 40.000 160 69 5 5 143 7 160 3.66e-25 108
Msa0163930 AT2G36420.1 33.218 289 134 9 236 503 185 435 4.63e-18 87.0

Find 102 sgRNAs with CRISPR-Local

Find 289 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACGAAAATATTATTAAATT+AGG 0.124858 1_4:-42371794 None:intergenic
GAAAATGACAAACCTCTATT+TGG 0.129831 1_4:-42372829 None:intergenic
TTCTTATATCTGGTGTGTTT+TGG 0.238547 1_4:-42372214 None:intergenic
TCATATAGAAAGAAAATTAA+TGG 0.247613 1_4:-42372001 None:intergenic
CTTCCTCATCTTCCCCTGAT+TGG 0.248387 1_4:-42374779 None:intergenic
TATGTTAATGTGGGTAAATT+TGG 0.270268 1_4:+42376976 Msa0163930:exon
AATTGTAACAAAATTCAATT+AGG 0.281165 1_4:-42377226 None:intergenic
GAAAAGGGTATGCAAGAAAA+TGG 0.283502 1_4:+42376785 Msa0163930:CDS
ACGAAAATATTATTAAATTA+GGG 0.289681 1_4:-42371793 None:intergenic
GATTTCTCTAGAGAGGAAAT+TGG 0.297301 1_4:+42376858 Msa0163930:CDS
AAAATGACAAACCTCTATTT+GGG 0.299257 1_4:-42372828 None:intergenic
TTGAGGAAGATCTTTGTATT+TGG 0.327013 1_4:-42372109 None:intergenic
TGAAGATAAATCTTTGGATA+TGG 0.335820 1_4:+42372595 Msa0163930:CDS
ACTAGTTTATGATCTCATTA+AGG 0.340770 1_4:+42376716 Msa0163930:CDS
AAGTAAAAGTGATGCTGTTT+TGG 0.340912 1_4:-42372291 None:intergenic
ATGTAGTTGTTTAAAAGAAA+TGG 0.342015 1_4:-42372071 None:intergenic
TTCTTCAACTATGTTGTTGA+AGG 0.346230 1_4:-42372498 None:intergenic
CCATAGGACAAAGAAAATAA+TGG 0.352123 1_4:+42374735 Msa0163930:intron
AGTGGATCTAAAACAGATAC+TGG 0.354451 1_4:-42374819 None:intergenic
TACAACACTTAGGTTCTGTT+TGG 0.366656 1_4:+42371974 Msa0163930:five_prime_UTR
AAAGGATTTGTTCTTGCTGT+TGG 0.370163 1_4:-42372345 None:intergenic
TTGAGGTGGGATTCTTCTAT+AGG 0.375928 1_4:+42372458 Msa0163930:CDS
AAGGATTTGTTCTTGCTGTT+GGG 0.384770 1_4:-42372344 None:intergenic
AAAGAAAATAATGGAGTTGA+TGG 0.398403 1_4:+42374744 Msa0163930:CDS
GGCGTCAACAAATTCCAATC+AGG 0.399740 1_4:+42374765 Msa0163930:CDS
CAAAGGTTAATTGTTCTTGT+TGG 0.416313 1_4:-42372167 None:intergenic
AATATTATTAAATTAGGGCT+TGG 0.417846 1_4:-42371788 None:intergenic
ATATGGACATTGTAATGAAA+AGG 0.424196 1_4:+42376769 Msa0163930:CDS
ATTTCTCTAGAGAGGAAATT+GGG 0.428343 1_4:+42376859 Msa0163930:CDS
GACCAAGTTGTAGTGGTGTT+TGG 0.438870 1_4:+42372561 Msa0163930:CDS
GAGTAATGAAGATAAATCTT+TGG 0.439203 1_4:+42372589 Msa0163930:CDS
CGTACGACGGCCGGAGGAAG+AGG 0.447907 1_4:-42372768 None:intergenic
AGGTTAATTGTTCTTGTTGG+TGG 0.450886 1_4:-42372164 None:intergenic
TATGGACATTGTAATGAAAA+GGG 0.451395 1_4:+42376770 Msa0163930:CDS
CTTTCAAGAGCAAAACGAAA+AGG 0.451999 1_4:-42372737 None:intergenic
TTCCTCCGGCCGTCGTACGC+CGG 0.455640 1_4:+42372772 Msa0163930:CDS
TGCCATCTTTCATGAACACT+TGG 0.462596 1_4:-42376672 None:intergenic
GAGGAATTAGTATGTTAATG+TGG 0.467284 1_4:+42376966 Msa0163930:exon
TTTGGGTTTAAGGGGAAACA+TGG 0.467410 1_4:+42377129 Msa0163930:three_prime_UTR
GGTTTGAAGTTTGTTTAAAG+AGG 0.470346 1_4:-42371918 None:intergenic
TTTCAAGAGCAAAACGAAAA+GGG 0.471693 1_4:-42372736 None:intergenic
GTTTGAAGTTTGTTTAAAGA+GGG 0.472670 1_4:-42371917 None:intergenic
AAATTCCGGCGTACGACGGC+CGG 0.473609 1_4:-42372777 None:intergenic
CTCTTCTATCATCATATCAA+TGG 0.481856 1_4:-42376835 None:intergenic
TCCGCCGGCGAAGAAAATTC+CGG 0.483619 1_4:-42372791 None:intergenic
TTAATTGTTCTTGTTGGTGG+TGG 0.490318 1_4:-42372161 None:intergenic
TTGGGTTTAAGGGGAAACAT+GGG 0.490438 1_4:+42377130 Msa0163930:three_prime_UTR
TTGTTTCTTCAATTGTAAAG+TGG 0.491708 1_4:-42372135 None:intergenic
AACAGCAAGAACAAATCCTT+TGG 0.491836 1_4:+42372347 Msa0163930:CDS
CGAAGCATCAAGTGAAGAGA+AGG 0.496212 1_4:+42376614 Msa0163930:CDS
AGTAATTTACAGCATTCTCA+TGG 0.499320 1_4:-42377200 None:intergenic
TCATAATCATCTTCTTCGAA+TGG 0.510892 1_4:-42376579 None:intergenic
ATCCAAGTGTTCATGAAAGA+TGG 0.513347 1_4:+42376670 Msa0163930:CDS
GACAAAAGAGCTAGCTGGAG+AGG 0.516447 1_4:+42376902 Msa0163930:CDS
GCAAGCAACTACTGTTAGAC+AGG 0.517082 1_4:+42376484 Msa0163930:CDS
TCTTCACAATTACAACACTT+AGG 0.517148 1_4:+42371964 Msa0163930:five_prime_UTR
CATGAACACTTGGATGGCAT+AGG 0.518478 1_4:-42376662 None:intergenic
TTATTAAATTAGGGCTTGGA+AGG 0.518709 1_4:-42371784 None:intergenic
TTCGTGATTCAAATCTAGAT+AGG 0.524191 1_4:-42371854 None:intergenic
GAGGAGACAAAAGAGCTAGC+TGG 0.525035 1_4:+42376897 Msa0163930:CDS
CTTCGCCGGCGGAGTCACCT+AGG 0.529522 1_4:+42372801 Msa0163930:CDS
AAGTTGAGAGAAAATTGAAG+AGG 0.530112 1_4:-42371939 None:intergenic
AGGAATTAGTATGTTAATGT+GGG 0.530772 1_4:+42376967 Msa0163930:exon
TATGCAAGAAAATGGAATTG+TGG 0.534028 1_4:+42376793 Msa0163930:CDS
AATGGAATTGTGGAAAGAAG+TGG 0.536453 1_4:+42376803 Msa0163930:CDS
GACCAAACACCACTACAACT+TGG 0.539144 1_4:-42372563 None:intergenic
GGTAAATTTGGATGCAGTTG+AGG 0.540119 1_4:+42376988 Msa0163930:three_prime_UTR
TATCAAGAGGATCTATATCT+CGG 0.551276 1_4:-42377255 None:intergenic
TTCTTGTGAATCTGTTGAAG+AGG 0.551979 1_4:+42372637 Msa0163930:CDS
CAATTGTAAAGTGGTGTTTG+AGG 0.555762 1_4:-42372126 None:intergenic
AAGAAAATTCCGGCGTACGA+CGG 0.564366 1_4:-42372781 None:intergenic
GAGACACTGAGGAAGGAATG+AGG 0.565148 1_4:-42371881 None:intergenic
GCGTCAACAAATTCCAATCA+GGG 0.566630 1_4:+42374766 Msa0163930:CDS
AGGGGAAGATGAGGAAGAGA+AGG 0.569911 1_4:+42374785 Msa0163930:CDS
AGGAGTGCTTCCTCTTCCTC+CGG 0.574190 1_4:+42372758 Msa0163930:CDS
GGGGAAACATGGGAGAAACA+TGG 0.576129 1_4:+42377140 Msa0163930:three_prime_UTR
GGGAAACATGGGAGAAACAT+GGG 0.580281 1_4:+42377141 Msa0163930:three_prime_UTR
GATATGGAAACTTCAAGTAG+TGG 0.581092 1_4:+42372611 Msa0163930:CDS
ACTCTTTGAATTCTCATCAC+CGG 0.581690 1_4:+42372244 Msa0163930:CDS
CATTGATATGATGATAGAAG+AGG 0.583761 1_4:+42376836 Msa0163930:CDS
ATTCCAATCAGGGGAAGATG+AGG 0.588369 1_4:+42374776 Msa0163930:CDS
AGAAGAGGATTTCTCTAGAG+AGG 0.590070 1_4:+42376851 Msa0163930:CDS
ATCTTTCATGAACACTTGGA+TGG 0.595411 1_4:-42376668 None:intergenic
GGCAAAAGAGAGTGAACTTG+TGG 0.596708 1_4:-42371819 None:intergenic
AGAAGAAGAGACACTGAGGA+AGG 0.603442 1_4:-42371888 None:intergenic
TCATCATAATCCTCAAAGAG+TGG 0.603702 1_4:-42374837 None:intergenic
CCATGAAAATGATGATGAAG+AGG 0.609147 1_4:+42374872 Msa0163930:CDS
AAATTTGGATGCAGTTGAGG+AGG 0.612780 1_4:+42376991 Msa0163930:three_prime_UTR
TTCCGGCGTACGACGGCCGG+AGG 0.623019 1_4:-42372774 None:intergenic
GGGCGCCTAGGTGACTCCGC+CGG 0.624652 1_4:-42372806 None:intergenic
AGTTTATGATCTCATTAAGG+AGG 0.626647 1_4:+42376719 Msa0163930:CDS
CTAGATAGGTTAAAATATCG+AGG 0.627715 1_4:-42371840 None:intergenic
AAATGACAAACCTCTATTTG+GGG 0.634332 1_4:-42372827 None:intergenic
TTTGAAGTGTGTTCTTGCAA+TGG 0.636025 1_4:+42372536 Msa0163930:CDS
GTTGAAGAAGAAGAAAACAA+AGG 0.657401 1_4:+42372512 Msa0163930:CDS
CATGAAAATGATGATGAAGA+GGG 0.661182 1_4:+42374873 Msa0163930:CDS
CGTCAACAAATTCCAATCAG+GGG 0.662468 1_4:+42374767 Msa0163930:CDS
GGTGATGAGAATTCAAAGAG+TGG 0.675053 1_4:-42372242 None:intergenic
AAATAGAAGAAGAGACACTG+AGG 0.686669 1_4:-42371892 None:intergenic
AATGACAAACCTCTATTTGG+GGG 0.687845 1_4:-42372826 None:intergenic
TCTCTAGAGAGGAAATTGGG+TGG 0.688038 1_4:+42376862 Msa0163930:CDS
AATGGAAGACCAAGTTGTAG+TGG 0.692111 1_4:+42372554 Msa0163930:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATAAAAAATACAAC+TGG + chr1_4:42371746-42371765 Msa0163930:five_prime_UTR 10.0%
!! ACGAAAATATTATTAAATTA+GGG - chr1_4:42371796-42371815 None:intergenic 10.0%
!! AACGAAAATATTATTAAATT+AGG - chr1_4:42371797-42371816 None:intergenic 10.0%
!!! TGATTATAATTAATCTTTTT+TGG - chr1_4:42373970-42373989 None:intergenic 10.0%
!!! CATTTTTGAAAATAAATTTA+TGG + chr1_4:42374184-42374203 Msa0163930:intron 10.0%
!! GGTTATTTATTTATAAATTT+GGG - chr1_4:42374601-42374620 None:intergenic 10.0%
!! AATTAGAATAATATCATAAT+TGG - chr1_4:42374697-42374716 None:intergenic 10.0%
!!! TTTTTTTGTATTAAATTTTC+AGG + chr1_4:42376459-42376478 Msa0163930:intron 10.0%
!! TCATATAGAAAGAAAATTAA+TGG - chr1_4:42372004-42372023 None:intergenic 15.0%
!!! TTAATTTTCTTTCTATATGA+TGG + chr1_4:42372004-42372023 Msa0163930:exon 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr1_4:42373288-42373307 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr1_4:42373287-42373306 Msa0163930:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr1_4:42373311-42373330 Msa0163930:intron 15.0%
!!! CATTTTGAAACAATTTTTTT+TGG + chr1_4:42373414-42373433 Msa0163930:intron 15.0%
!! AAAAAGAATTTATACAGATA+TGG - chr1_4:42374005-42374024 None:intergenic 15.0%
!! AAAAAGAATTTATACAGATA+TGG - chr1_4:42374005-42374024 None:intergenic 15.0%
!! GGGTTATTTATTTATAAATT+TGG - chr1_4:42374602-42374621 None:intergenic 15.0%
!!! TCGTAAAAACATATTATTTT+TGG + chr1_4:42375343-42375362 Msa0163930:intron 15.0%
!!! CGTAAAAACATATTATTTTT+GGG + chr1_4:42375344-42375363 Msa0163930:intron 15.0%
!!! TTTTTATTCACAAAAAATGT+AGG + chr1_4:42375409-42375428 Msa0163930:intron 15.0%
!!! GTATTTAAATATTAAGTTGA+TGG + chr1_4:42375440-42375459 Msa0163930:intron 15.0%
!! AATAAAAAGTTGAAATTTGA+TGG + chr1_4:42376346-42376365 Msa0163930:intron 15.0%
!!! AGAGACAAAAATTTTAATTT+GGG + chr1_4:42377112-42377131 Msa0163930:three_prime_UTR 15.0%
!!! AAAATTTTAATTTGGGTTTA+AGG + chr1_4:42377119-42377138 Msa0163930:three_prime_UTR 15.0%
!!! AAATTTTAATTTGGGTTTAA+GGG + chr1_4:42377120-42377139 Msa0163930:three_prime_UTR 15.0%
!! AATTGTAACAAAATTCAATT+AGG - chr1_4:42377229-42377248 None:intergenic 15.0%
!! AATATTATTAAATTAGGGCT+TGG - chr1_4:42371791-42371810 None:intergenic 20.0%
!! ATGTAGTTGTTTAAAAGAAA+TGG - chr1_4:42372074-42372093 None:intergenic 20.0%
!!! TTTCTGTTAAAGATATTTTG+AGG + chr1_4:42372441-42372460 Msa0163930:CDS 20.0%
!! TTAAGAAACTCATAAACTTT+AGG - chr1_4:42372911-42372930 None:intergenic 20.0%
!! TTTGTATTGAAAAGTGAAAT+GGG - chr1_4:42373147-42373166 None:intergenic 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr1_4:42373297-42373316 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr1_4:42373374-42373393 Msa0163930:intron 20.0%
!! GTCAAAATAAAACAAATTTC+CGG - chr1_4:42374335-42374354 None:intergenic 20.0%
!!! TTAACAGATTTTGGAAATAA+TGG - chr1_4:42374370-42374389 None:intergenic 20.0%
!!! GCTTATATTTTAACAGATTT+TGG - chr1_4:42374379-42374398 None:intergenic 20.0%
!! AAATATAAGCACTTATAAGA+TGG + chr1_4:42374389-42374408 Msa0163930:intron 20.0%
!! TTCATTAGTAAATAGAATGT+CGG - chr1_4:42374504-42374523 None:intergenic 20.0%
!!! TTCTCATTTGTATTTTTGTT+TGG + chr1_4:42374528-42374547 Msa0163930:intron 20.0%
!!! TTTGTCATTTTTTTGTTGTA+TGG + chr1_4:42375485-42375504 Msa0163930:intron 20.0%
!!! TCTTATGGTATTTTTTGTAA+CGG - chr1_4:42375560-42375579 None:intergenic 20.0%
!! TTACAAAAAATACCATAAGA+GGG + chr1_4:42375560-42375579 Msa0163930:intron 20.0%
!! ATATTGAATGTGTTTGTATA+AGG + chr1_4:42375825-42375844 Msa0163930:intron 20.0%
!!! ACTTAATTTTTCACAAGATA+TGG + chr1_4:42376752-42376771 Msa0163930:CDS 20.0%
!!! GAGAGACAAAAATTTTAATT+TGG + chr1_4:42377111-42377130 Msa0163930:three_prime_UTR 20.0%
!!! AATTTTAATTTGGGTTTAAG+GGG + chr1_4:42377121-42377140 Msa0163930:three_prime_UTR 20.0%
!! GTTTGAAGTTTGTTTAAAGA+GGG - chr1_4:42371920-42371939 None:intergenic 25.0%
!! TTGTTTCTTCAATTGTAAAG+TGG - chr1_4:42372138-42372157 None:intergenic 25.0%
!! AAAAACAAGCATTTTTGCAA+AGG - chr1_4:42372187-42372206 None:intergenic 25.0%
!!! TGTTAAAGATATTTTGAGGT+GGG + chr1_4:42372445-42372464 Msa0163930:CDS 25.0%
! GAGTAATGAAGATAAATCTT+TGG + chr1_4:42372589-42372608 Msa0163930:CDS 25.0%
! TGAAGATAAATCTTTGGATA+TGG + chr1_4:42372595-42372614 Msa0163930:CDS 25.0%
! AAAATGACAAACCTCTATTT+GGG - chr1_4:42372831-42372850 None:intergenic 25.0%
!!! GGACAATATTTTTTTGCAAA+TGG - chr1_4:42373112-42373131 None:intergenic 25.0%
!! TGAAATGGGTCAATTTTTAT+GGG - chr1_4:42373133-42373152 None:intergenic 25.0%
! GTTTGTATTGAAAAGTGAAA+TGG - chr1_4:42373148-42373167 None:intergenic 25.0%
!! GTAATGTACAGAGTATTAAT+TGG + chr1_4:42373336-42373355 Msa0163930:intron 25.0%
! TCATAAATTAATTGAGCCTT+TGG - chr1_4:42373615-42373634 None:intergenic 25.0%
! AGATACATGTTCATAGATTT+AGG - chr1_4:42373927-42373946 None:intergenic 25.0%
! ATACAGATATGGAAAGTAAA+CGG - chr1_4:42373994-42374013 None:intergenic 25.0%
! ATACAGATATGGAAAGTAAA+CGG - chr1_4:42373994-42374013 None:intergenic 25.0%
!!! AGATTTTGGAAATAATGGAA+GGG - chr1_4:42374365-42374384 None:intergenic 25.0%
!!! TTCAGTTCAATAGTTTTGTT+CGG + chr1_4:42374425-42374444 Msa0163930:intron 25.0%
! CAGTACTTGTTTCATAATTT+GGG - chr1_4:42374622-42374641 None:intergenic 25.0%
! TCAGTACTTGTTTCATAATT+TGG - chr1_4:42374623-42374642 None:intergenic 25.0%
!! AAAGAAAATAATGGAGTTGA+TGG + chr1_4:42374744-42374763 Msa0163930:CDS 25.0%
! TAATGACATACTTTGTACAT+TGG - chr1_4:42374925-42374944 None:intergenic 25.0%
!! ACGAATTTTCGTATACTTTT+GGG + chr1_4:42375218-42375237 Msa0163930:intron 25.0%
! GTTACAAAAAATACCATAAG+AGG + chr1_4:42375559-42375578 Msa0163930:intron 25.0%
! TACAAAAAATACCATAAGAG+GGG + chr1_4:42375561-42375580 Msa0163930:intron 25.0%
!! ATACTAACATCTATCTTTTG+TGG + chr1_4:42375621-42375640 Msa0163930:intron 25.0%
!! TACTAACATCTATCTTTTGT+GGG + chr1_4:42375622-42375641 Msa0163930:intron 25.0%
! AAACCACTGTAATCTTTAAA+TGG - chr1_4:42375650-42375669 None:intergenic 25.0%
! TAATGGTAAAAACAAAGAGT+AGG - chr1_4:42375718-42375737 None:intergenic 25.0%
!! CTGACATGAAAAAATTTTGT+GGG - chr1_4:42375777-42375796 None:intergenic 25.0%
!! TCTGACATGAAAAAATTTTG+TGG - chr1_4:42375778-42375797 None:intergenic 25.0%
! TAAAGTTTAAGCATGTTTGA+TGG + chr1_4:42375859-42375878 Msa0163930:intron 25.0%
! CTCTTGTGAATATTTAAACT+TGG + chr1_4:42375909-42375928 Msa0163930:intron 25.0%
!! TTACTGCTGTTAATAGATTT+TGG + chr1_4:42376080-42376099 Msa0163930:intron 25.0%
! GATAAAGTAGTAGAAATTTG+TGG - chr1_4:42376240-42376259 None:intergenic 25.0%
!! TCTATTCACTTAATTTTGGA+AGG - chr1_4:42376410-42376429 None:intergenic 25.0%
! TCCAAAATTAAGTGAATAGA+AGG + chr1_4:42376410-42376429 Msa0163930:intron 25.0%
!! TCCTTCTATTCACTTAATTT+TGG - chr1_4:42376414-42376433 None:intergenic 25.0%
! AAATTAAGTGAATAGAAGGA+TGG + chr1_4:42376414-42376433 Msa0163930:intron 25.0%
! ATATGGACATTGTAATGAAA+AGG + chr1_4:42376769-42376788 Msa0163930:CDS 25.0%
! TATGGACATTGTAATGAAAA+GGG + chr1_4:42376770-42376789 Msa0163930:CDS 25.0%
! AGGAATTAGTATGTTAATGT+GGG + chr1_4:42376967-42376986 Msa0163930:exon 25.0%
! TATGTTAATGTGGGTAAATT+TGG + chr1_4:42376976-42376995 Msa0163930:exon 25.0%
TTATTAAATTAGGGCTTGGA+AGG - chr1_4:42371787-42371806 None:intergenic 30.0%
CTAGATAGGTTAAAATATCG+AGG - chr1_4:42371843-42371862 None:intergenic 30.0%
TTCGTGATTCAAATCTAGAT+AGG - chr1_4:42371857-42371876 None:intergenic 30.0%
! GGTTTGAAGTTTGTTTAAAG+AGG - chr1_4:42371921-42371940 None:intergenic 30.0%
AAGTTGAGAGAAAATTGAAG+AGG - chr1_4:42371942-42371961 None:intergenic 30.0%
TCTTCACAATTACAACACTT+AGG + chr1_4:42371964-42371983 Msa0163930:five_prime_UTR 30.0%
TTGAGGAAGATCTTTGTATT+TGG - chr1_4:42372112-42372131 None:intergenic 30.0%
CAAAGGTTAATTGTTCTTGT+TGG - chr1_4:42372170-42372189 None:intergenic 30.0%
! TTCTTATATCTGGTGTGTTT+TGG - chr1_4:42372217-42372236 None:intergenic 30.0%
! AGTGGTGATTTTCTTATATC+TGG - chr1_4:42372227-42372246 None:intergenic 30.0%
!! AAGTAAAAGTGATGCTGTTT+TGG - chr1_4:42372294-42372313 None:intergenic 30.0%
!!! AACAAATCCTTTGGTGTTTT+TGG + chr1_4:42372356-42372375 Msa0163930:CDS 30.0%
!! CTGTTAAAGATATTTTGAGG+TGG + chr1_4:42372444-42372463 Msa0163930:CDS 30.0%
TTCTTCAACTATGTTGTTGA+AGG - chr1_4:42372501-42372520 None:intergenic 30.0%
GTTGAAGAAGAAGAAAACAA+AGG + chr1_4:42372512-42372531 Msa0163930:CDS 30.0%
TTTCAAGAGCAAAACGAAAA+GGG - chr1_4:42372739-42372758 None:intergenic 30.0%
AAATGACAAACCTCTATTTG+GGG - chr1_4:42372830-42372849 None:intergenic 30.0%
GAAAATGACAAACCTCTATT+TGG - chr1_4:42372832-42372851 None:intergenic 30.0%
CATAGATGACATATATAGCT+AGG - chr1_4:42372991-42373010 None:intergenic 30.0%
AGCTATATATGTCATCTATG+TGG + chr1_4:42372991-42373010 Msa0163930:intron 30.0%
GCTATATATGTCATCTATGT+GGG + chr1_4:42372992-42373011 Msa0163930:intron 30.0%
AATTAAAAAGTTACTCCCTC+CGG + chr1_4:42373071-42373090 Msa0163930:intron 30.0%
! GTGAAATGGGTCAATTTTTA+TGG - chr1_4:42373134-42373153 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1_4:42373205-42373224 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr1_4:42373206-42373225 Msa0163930:intron 30.0%
! ATGTACAGAGTATTAATTGG+AGG + chr1_4:42373339-42373358 Msa0163930:intron 30.0%
! TGTACAGAGTATTAATTGGA+GGG + chr1_4:42373340-42373359 Msa0163930:intron 30.0%
AGAATGTATTGAATTGAGAG+TGG - chr1_4:42373483-42373502 None:intergenic 30.0%
!! AATGCACCAATAGTTGATAA+GGG + chr1_4:42373526-42373545 Msa0163930:intron 30.0%
AGTGAAAGAGAGAGAAAAAT+GGG - chr1_4:42373560-42373579 None:intergenic 30.0%
AAGTGAAAGAGAGAGAAAAA+TGG - chr1_4:42373561-42373580 None:intergenic 30.0%
!! AATGCACCAATAGTTGATAA+GGG + chr1_4:42373526-42373545 Msa0163930:intron 30.0%
AGTGAAAGAGAGAGAAAAAT+GGG - chr1_4:42373560-42373579 None:intergenic 30.0%
AAGTGAAAGAGAGAGAAAAA+TGG - chr1_4:42373561-42373580 None:intergenic 30.0%
AATAAGTGTGAAATGAGTCA+AGG + chr1_4:42373712-42373731 Msa0163930:intron 30.0%
ATAAGTGTGAAATGAGTCAA+GGG + chr1_4:42373713-42373732 Msa0163930:intron 30.0%
GACAATGCATAAAATATGCA+AGG - chr1_4:42373880-42373899 None:intergenic 30.0%
!!! ACTGTTGTGTTTGTTTTTGT+CGG + chr1_4:42374275-42374294 Msa0163930:intron 30.0%
AATATATCAGTCATAGGATC+TGG - chr1_4:42374310-42374329 None:intergenic 30.0%
!! CAGATTTTGGAAATAATGGA+AGG - chr1_4:42374366-42374385 None:intergenic 30.0%
! AGTTGTTGTGAATTTTCCAT+AGG + chr1_4:42374719-42374738 Msa0163930:intron 30.0%
! CCATTATTTTCTTTGTCCTA+TGG - chr1_4:42374738-42374757 None:intergenic 30.0%
CCATAGGACAAAGAAAATAA+TGG + chr1_4:42374735-42374754 Msa0163930:intron 30.0%
! CATGAAAATGATGATGAAGA+GGG + chr1_4:42374873-42374892 Msa0163930:CDS 30.0%
!! TGAGTCTTGTTAAGATGATA+TGG + chr1_4:42375186-42375205 Msa0163930:intron 30.0%
! GACGAATTTTCGTATACTTT+TGG + chr1_4:42375217-42375236 Msa0163930:intron 30.0%
GACAAATGAGTAATAAGTTG+CGG + chr1_4:42375288-42375307 Msa0163930:intron 30.0%
GTTCCATTTAAAGATTACAG+TGG + chr1_4:42375644-42375663 Msa0163930:intron 30.0%
TTTGCATTGAATGTGGAAAT+TGG + chr1_4:42375686-42375705 Msa0163930:intron 30.0%
TAAAAACAAAGAGTAGGCTA+AGG - chr1_4:42375712-42375731 None:intergenic 30.0%
CACACATTACTTATGTCTAA+TGG - chr1_4:42375735-42375754 None:intergenic 30.0%
CATTAGACATAAGTAATGTG+TGG + chr1_4:42375733-42375752 Msa0163930:intron 30.0%
!! GCATGTTTGATGGTAATTTT+TGG + chr1_4:42375869-42375888 Msa0163930:intron 30.0%
AATGAAGCAATAACTCACAT+GGG - chr1_4:42375949-42375968 None:intergenic 30.0%
ATCTATTAACAGCAGTAACT+AGG - chr1_4:42376078-42376097 None:intergenic 30.0%
!!! CTGTTAATAGATTTTGGTTG+CGG + chr1_4:42376086-42376105 Msa0163930:intron 30.0%
!!! TGTTAATAGATTTTGGTTGC+GGG + chr1_4:42376087-42376106 Msa0163930:intron 30.0%
CTGTTGGATAAAGATCATAT+CGG - chr1_4:42376162-42376181 None:intergenic 30.0%
TTCACAACATTCAGTTAACT+AGG - chr1_4:42376287-42376306 None:intergenic 30.0%
TCATAATCATCTTCTTCGAA+TGG - chr1_4:42376582-42376601 None:intergenic 30.0%
! CTAGTCTCTTAAGAACTTTT+TGG - chr1_4:42376701-42376720 None:intergenic 30.0%
TATGCAAGAAAATGGAATTG+TGG + chr1_4:42376793-42376812 Msa0163930:CDS 30.0%
CTCTTCTATCATCATATCAA+TGG - chr1_4:42376838-42376857 None:intergenic 30.0%
CATTGATATGATGATAGAAG+AGG + chr1_4:42376836-42376855 Msa0163930:CDS 30.0%
! ATTTCTCTAGAGAGGAAATT+GGG + chr1_4:42376859-42376878 Msa0163930:CDS 30.0%
!! ACTTGTTGATGAATTTTCAG+AGG + chr1_4:42376947-42376966 Msa0163930:CDS 30.0%
GAGGAATTAGTATGTTAATG+TGG + chr1_4:42376966-42376985 Msa0163930:exon 30.0%
AGTAATTTACAGCATTCTCA+TGG - chr1_4:42377203-42377222 None:intergenic 30.0%
AAATAGAAGAAGAGACACTG+AGG - chr1_4:42371895-42371914 None:intergenic 35.0%
TACAACACTTAGGTTCTGTT+TGG + chr1_4:42371974-42371993 Msa0163930:five_prime_UTR 35.0%
CAATTGTAAAGTGGTGTTTG+AGG - chr1_4:42372129-42372148 None:intergenic 35.0%
! TTAATTGTTCTTGTTGGTGG+TGG - chr1_4:42372164-42372183 None:intergenic 35.0%
AGGTTAATTGTTCTTGTTGG+TGG - chr1_4:42372167-42372186 None:intergenic 35.0%
ACTCTTTGAATTCTCATCAC+CGG + chr1_4:42372244-42372263 Msa0163930:CDS 35.0%
!! ATTCTAAGAGGACTTTTGAC+CGG - chr1_4:42372266-42372285 None:intergenic 35.0%
!! AAGGATTTGTTCTTGCTGTT+GGG - chr1_4:42372347-42372366 None:intergenic 35.0%
! AAAGGATTTGTTCTTGCTGT+TGG - chr1_4:42372348-42372367 None:intergenic 35.0%
AACAGCAAGAACAAATCCTT+TGG + chr1_4:42372347-42372366 Msa0163930:CDS 35.0%
AAACGAACCAAAAACACCAA+AGG - chr1_4:42372366-42372385 None:intergenic 35.0%
! TTTGAAGTGTGTTCTTGCAA+TGG + chr1_4:42372536-42372555 Msa0163930:CDS 35.0%
GATATGGAAACTTCAAGTAG+TGG + chr1_4:42372611-42372630 Msa0163930:CDS 35.0%
TTCTTGTGAATCTGTTGAAG+AGG + chr1_4:42372637-42372656 Msa0163930:CDS 35.0%
CTTTCACAGAAAAATCCATG+AGG - chr1_4:42372716-42372735 None:intergenic 35.0%
CTTTCAAGAGCAAAACGAAA+AGG - chr1_4:42372740-42372759 None:intergenic 35.0%
! CTTTTCGTTTTGCTCTTGAA+AGG + chr1_4:42372738-42372757 Msa0163930:CDS 35.0%
AATGACAAACCTCTATTTGG+GGG - chr1_4:42372829-42372848 None:intergenic 35.0%
ATATAGCTAGGTTAGACATG+TGG - chr1_4:42372979-42372998 None:intergenic 35.0%
GCAAATGGCTCAGTTATTAT+GGG - chr1_4:42373097-42373116 None:intergenic 35.0%
TGCAAATGGCTCAGTTATTA+TGG - chr1_4:42373098-42373117 None:intergenic 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr1_4:42373440-42373459 Msa0163930:intron 35.0%
! GAATGCACCAATAGTTGATA+AGG + chr1_4:42373525-42373544 Msa0163930:intron 35.0%
ATAAGTGTGAAATGAGCCAA+AGG + chr1_4:42373596-42373615 Msa0163930:intron 35.0%
! GAATGCACCAATAGTTGATA+AGG + chr1_4:42373525-42373544 Msa0163930:intron 35.0%
AGTCAAGGGCTCAATTAAAA+TGG + chr1_4:42373727-42373746 Msa0163930:intron 35.0%
GTCAAGGGCTCAATTAAAAT+GGG + chr1_4:42373728-42373747 Msa0163930:intron 35.0%
! AGCATTATTGTGTCTCCTTT+TGG + chr1_4:42373830-42373849 Msa0163930:intron 35.0%
TGCATAAAATATGCAAGGTC+CGG - chr1_4:42373875-42373894 None:intergenic 35.0%
AACTCACGAGTTAAATATGG+TGG - chr1_4:42374239-42374258 None:intergenic 35.0%
GCAAACTCACGAGTTAAATA+TGG - chr1_4:42374242-42374261 None:intergenic 35.0%
CACAACAGTACAAACAAACA+CGG - chr1_4:42374264-42374283 None:intergenic 35.0%
CCTATGACTGATATATTTGC+CGG + chr1_4:42374313-42374332 Msa0163930:intron 35.0%
! AGTGGATCTAAAACAGATAC+TGG - chr1_4:42374822-42374841 None:intergenic 35.0%
!! TGTTTTAGATCCACTCTTTG+AGG + chr1_4:42374827-42374846 Msa0163930:CDS 35.0%
TCATCATAATCCTCAAAGAG+TGG - chr1_4:42374840-42374859 None:intergenic 35.0%
! CCTCTTCATCATCATTTTCA+TGG - chr1_4:42374875-42374894 None:intergenic 35.0%
! CCATGAAAATGATGATGAAG+AGG + chr1_4:42374872-42374891 Msa0163930:CDS 35.0%
!! TGAAGAGGGTGATTTTGATA+TGG + chr1_4:42374887-42374906 Msa0163930:CDS 35.0%
ACAAAAAATGTAGGAGAGAG+TGG + chr1_4:42375418-42375437 Msa0163930:intron 35.0%
! ACAGTGGTTTTTCACTTAGA+AGG + chr1_4:42375660-42375679 Msa0163930:intron 35.0%
!! AAGGCATTTTGCATTGAATG+TGG + chr1_4:42375679-42375698 Msa0163930:intron 35.0%
GAATGAAGCAATAACTCACA+TGG - chr1_4:42375950-42375969 None:intergenic 35.0%
! GAGTTCTTCAAGACCTTTTT+AGG + chr1_4:42376002-42376021 Msa0163930:intron 35.0%
!! TTTTTAGGCATTGCAAGCTT+GGG + chr1_4:42376017-42376036 Msa0163930:intron 35.0%
GGCATAGAGAAAACAACAAT+AGG - chr1_4:42376266-42376285 None:intergenic 35.0%
GAACGAATTTCTTAGACTCT+CGG - chr1_4:42376313-42376332 None:intergenic 35.0%
!! ATTCTTTTCTCGAGTTCTAG+TGG - chr1_4:42376543-42376562 None:intergenic 35.0%
ATCTTTCATGAACACTTGGA+TGG - chr1_4:42376671-42376690 None:intergenic 35.0%
ATCCAAGTGTTCATGAAAGA+TGG + chr1_4:42376670-42376689 Msa0163930:CDS 35.0%
! GAAAAGGGTATGCAAGAAAA+TGG + chr1_4:42376785-42376804 Msa0163930:CDS 35.0%
AATGGAATTGTGGAAAGAAG+TGG + chr1_4:42376803-42376822 Msa0163930:CDS 35.0%
! GATTTCTCTAGAGAGGAAAT+TGG + chr1_4:42376858-42376877 Msa0163930:CDS 35.0%
GGTGATGAGAATTCAAAGAG+TGG - chr1_4:42372245-42372264 None:intergenic 40.0%
!!! AAAGTGATGCTGTTTTGGCA+GGG - chr1_4:42372289-42372308 None:intergenic 40.0%
!!! AAAAGTGATGCTGTTTTGGC+AGG - chr1_4:42372290-42372309 None:intergenic 40.0%
TTGAGGTGGGATTCTTCTAT+AGG + chr1_4:42372458-42372477 Msa0163930:CDS 40.0%
AATGGAAGACCAAGTTGTAG+TGG + chr1_4:42372554-42372573 Msa0163930:CDS 40.0%
!!! TGTGCTTGTTTTGATCCTCA+TGG + chr1_4:42372698-42372717 Msa0163930:CDS 40.0%
!!! GACACTCATTTTGAAACGGA+TGG - chr1_4:42373444-42373463 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_4:42373444-42373463 Msa0163930:intron 40.0%
TGAGTGCCCTTATCAACTAT+TGG - chr1_4:42373535-42373554 None:intergenic 40.0%
TGAGTGCCCTTATCAACTAT+TGG - chr1_4:42373535-42373554 None:intergenic 40.0%
AGGGCTCAATTAAAATGGGA+CGG + chr1_4:42373732-42373751 Msa0163930:intron 40.0%
CTCAATTAAAATGGGACGGA+GGG + chr1_4:42373736-42373755 Msa0163930:intron 40.0%
! ATTGTGTCTCCTTTTGGTAG+TGG + chr1_4:42373836-42373855 Msa0163930:intron 40.0%
GCATAAAATATGCAAGGTCC+GGG - chr1_4:42373874-42373893 None:intergenic 40.0%
CCGGCAAATATATCAGTCAT+AGG - chr1_4:42374316-42374335 None:intergenic 40.0%
GCGTCAACAAATTCCAATCA+GGG + chr1_4:42374766-42374785 Msa0163930:CDS 40.0%
CGTCAACAAATTCCAATCAG+GGG + chr1_4:42374767-42374786 Msa0163930:CDS 40.0%
! CTTTGAAGAAACGTGTACGA+CGG - chr1_4:42375529-42375548 None:intergenic 40.0%
CAAGCTTGCAATGCCTAAAA+AGG - chr1_4:42376018-42376037 None:intergenic 40.0%
!! CTTTTTAGGCATTGCAAGCT+TGG + chr1_4:42376016-42376035 Msa0163930:intron 40.0%
TCATTGCAGGCAATAGATCT+TGG - chr1_4:42376185-42376204 None:intergenic 40.0%
GATCTATTGCCTGCAATGAT+CGG + chr1_4:42376186-42376205 Msa0163930:intron 40.0%
TGCCATCTTTCATGAACACT+TGG - chr1_4:42376675-42376694 None:intergenic 40.0%
! AGAAGAGGATTTCTCTAGAG+AGG + chr1_4:42376851-42376870 Msa0163930:CDS 40.0%
GGTAAATTTGGATGCAGTTG+AGG + chr1_4:42376988-42377007 Msa0163930:three_prime_UTR 40.0%
AAATTTGGATGCAGTTGAGG+AGG + chr1_4:42376991-42377010 Msa0163930:three_prime_UTR 40.0%
! TTTGGGTTTAAGGGGAAACA+TGG + chr1_4:42377129-42377148 Msa0163930:three_prime_UTR 40.0%
TTGGGTTTAAGGGGAAACAT+GGG + chr1_4:42377130-42377149 Msa0163930:three_prime_UTR 40.0%
GGCAAAAGAGAGTGAACTTG+TGG - chr1_4:42371822-42371841 None:intergenic 45.0%
AGAAGAAGAGACACTGAGGA+AGG - chr1_4:42371891-42371910 None:intergenic 45.0%
!! GTTTTGGCAGGGATTCTAAG+AGG - chr1_4:42372278-42372297 None:intergenic 45.0%
GACCAAGTTGTAGTGGTGTT+TGG + chr1_4:42372561-42372580 Msa0163930:CDS 45.0%
GACCAAACACCACTACAACT+TGG - chr1_4:42372566-42372585 None:intergenic 45.0%
AAGAAAATTCCGGCGTACGA+CGG - chr1_4:42372784-42372803 None:intergenic 45.0%
ATGGCTCAGTTATTATGGGC+CGG - chr1_4:42373093-42373112 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr1_4:42373443-42373462 Msa0163930:intron 45.0%
GCTCAATTAAAATGGGACGG+AGG + chr1_4:42373735-42373754 Msa0163930:intron 45.0%
GGCGTCAACAAATTCCAATC+AGG + chr1_4:42374765-42374784 Msa0163930:CDS 45.0%
ATTCCAATCAGGGGAAGATG+AGG + chr1_4:42374776-42374795 Msa0163930:CDS 45.0%
GAGTAATAAGTTGCGGCGTT+AGG + chr1_4:42375295-42375314 Msa0163930:intron 45.0%
! ATACCATAAGAGGGGCTAGT+CGG + chr1_4:42375569-42375588 Msa0163930:intron 45.0%
AGGCAATAGATCTTGGCTGT+TGG - chr1_4:42376178-42376197 None:intergenic 45.0%
AGAGATTCACCGATCATTGC+AGG - chr1_4:42376198-42376217 None:intergenic 45.0%
GCAAGCAACTACTGTTAGAC+AGG + chr1_4:42376484-42376503 Msa0163930:CDS 45.0%
! CGAAGCATCAAGTGAAGAGA+AGG + chr1_4:42376614-42376633 Msa0163930:CDS 45.0%
CATGAACACTTGGATGGCAT+AGG - chr1_4:42376665-42376684 None:intergenic 45.0%
! TCTCTAGAGAGGAAATTGGG+TGG + chr1_4:42376862-42376881 Msa0163930:CDS 45.0%
TGGGTGGAAGAAAAATGCTG+AGG + chr1_4:42376878-42376897 Msa0163930:CDS 45.0%
GGGAAACATGGGAGAAACAT+GGG + chr1_4:42377141-42377160 Msa0163930:three_prime_UTR 45.0%
GAGACACTGAGGAAGGAATG+AGG - chr1_4:42371884-42371903 None:intergenic 50.0%
! TACGCCGGAATTTTCTTCGC+CGG + chr1_4:42372787-42372806 Msa0163930:CDS 50.0%
CTCAGTTATTATGGGCCGGA+GGG - chr1_4:42373089-42373108 None:intergenic 50.0%
!!! TGTCTCCTTTTGGTAGTGGC+CGG + chr1_4:42373840-42373859 Msa0163930:intron 50.0%
AAACACCGGCCACTACCAAA+AGG - chr1_4:42373848-42373867 None:intergenic 50.0%
TGAGCTTAGCTCAGCTGGTT+GGG - chr1_4:42373902-42373921 None:intergenic 50.0%
!! CAGCTGATTTTGCAGCGAGT+TGG + chr1_4:42374212-42374231 Msa0163930:intron 50.0%
CTTCCTCATCTTCCCCTGAT+TGG - chr1_4:42374782-42374801 None:intergenic 50.0%
AGGGGAAGATGAGGAAGAGA+AGG + chr1_4:42374785-42374804 Msa0163930:CDS 50.0%
! GTTGCGGCGTTAGGCATTTT+TGG + chr1_4:42375304-42375323 Msa0163930:intron 50.0%
GGCATTGCAAGCTTGGGAAT+TGG + chr1_4:42376023-42376042 Msa0163930:intron 50.0%
GAGGAGACAAAAGAGCTAGC+TGG + chr1_4:42376897-42376916 Msa0163930:CDS 50.0%
GACAAAAGAGCTAGCTGGAG+AGG + chr1_4:42376902-42376921 Msa0163930:CDS 50.0%
GGGGAAACATGGGAGAAACA+TGG + chr1_4:42377140-42377159 Msa0163930:three_prime_UTR 50.0%
!! AGGAGTGCTTCCTCTTCCTC+CGG + chr1_4:42372758-42372777 Msa0163930:CDS 55.0%
TCCGCCGGCGAAGAAAATTC+CGG - chr1_4:42372794-42372813 None:intergenic 55.0%
GCTCAGTTATTATGGGCCGG+AGG - chr1_4:42373090-42373109 None:intergenic 55.0%
TAGTGGCCGGTGTTTGAACC+CGG + chr1_4:42373853-42373872 Msa0163930:intron 55.0%
CAAGGTCCGGGTTCAAACAC+CGG - chr1_4:42373862-42373881 None:intergenic 55.0%
GTGAGCTTAGCTCAGCTGGT+TGG - chr1_4:42373903-42373922 None:intergenic 55.0%
AGGAGTGAGCTTAGCTCAGC+TGG - chr1_4:42373907-42373926 None:intergenic 55.0%
! TCACCGACTAGCCCCTCTTA+TGG - chr1_4:42375575-42375594 None:intergenic 55.0%
AAATTCCGGCGTACGACGGC+CGG - chr1_4:42372780-42372799 None:intergenic 60.0%
! GCCGGAATTTTCTTCGCCGG+CGG + chr1_4:42372790-42372809 Msa0163930:CDS 60.0%
ACCTAGGCGCCCCCAAATAG+AGG + chr1_4:42372817-42372836 Msa0163930:CDS 60.0%
!! ACCTCTATTTGGGGGCGCCT+AGG - chr1_4:42372821-42372840 None:intergenic 60.0%
CGTACGACGGCCGGAGGAAG+AGG - chr1_4:42372771-42372790 None:intergenic 70.0%
TTCCTCCGGCCGTCGTACGC+CGG + chr1_4:42372772-42372791 Msa0163930:CDS 70.0%
CTTCGCCGGCGGAGTCACCT+AGG + chr1_4:42372801-42372820 Msa0163930:CDS 70.0%
TTCCGGCGTACGACGGCCGG+AGG - chr1_4:42372777-42372796 None:intergenic 75.0%
GGGCGCCTAGGTGACTCCGC+CGG - chr1_4:42372809-42372828 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 42371739 42377272 42371739 ID=Msa0163930;Name=Msa0163930
chr1_4 mRNA 42371739 42377272 42371739 ID=Msa0163930-mRNA-1;Parent=Msa0163930;Name=Msa0163930-mRNA-1;_AED=0.01;_eAED=0.01;_QI=281|1|1|1|1|1|3|289|504
chr1_4 exon 42371739 42372838 42371739 ID=Msa0163930-mRNA-1:exon:12261;Parent=Msa0163930-mRNA-1
chr1_4 exon 42374741 42374933 42374741 ID=Msa0163930-mRNA-1:exon:12262;Parent=Msa0163930-mRNA-1
chr1_4 exon 42376481 42377272 42376481 ID=Msa0163930-mRNA-1:exon:12263;Parent=Msa0163930-mRNA-1
chr1_4 five_prime_UTR 42371739 42372019 42371739 ID=Msa0163930-mRNA-1:five_prime_utr;Parent=Msa0163930-mRNA-1
chr1_4 CDS 42372020 42372838 42372020 ID=Msa0163930-mRNA-1:cds;Parent=Msa0163930-mRNA-1
chr1_4 CDS 42374741 42374933 42374741 ID=Msa0163930-mRNA-1:cds;Parent=Msa0163930-mRNA-1
chr1_4 CDS 42376481 42376983 42376481 ID=Msa0163930-mRNA-1:cds;Parent=Msa0163930-mRNA-1
chr1_4 three_prime_UTR 42376984 42377272 42376984 ID=Msa0163930-mRNA-1:three_prime_utr;Parent=Msa0163930-mRNA-1
Gene Sequence

>Msa0163930

ATGATGGCTGCTCAGAAGCACTTACATGAGCTACTCAAAGAAGATCAAGAACCATTTCTTTTAAACAACTACATTTCACACAAACGTAACCAAATACAAAGATCTTCCTCAAACACCACTTTACAATTGAAGAAACAAAAACCACCACCAACAAGAACAATTAACCTTTGCAAAAATGCTTGTTTTTTCTCATTCCAAAACACACCAGATATAAGAAAATCACCACTCTTTGAATTCTCATCACCGGTCAAAAGTCCTCTTAGAATCCCTGCCAAAACAGCATCACTTTTACTTGAAGCAGCTCTTAAAATTCAGAGTAAAAAACCCAACAGCAAGAACAAATCCTTTGGTGTTTTTGGTTCGTTTTTCAAGAAACTAACACAAAGAAACAGAAGCAAAAAGAGTGAAAATGAAGAAAATGTTTCTGTTAAAGATATTTTGAGGTGGGATTCTTCTATAGGAAGAAGACATAGAAAATCCTTCAACAACATAGTTGAAGAAGAAGAAAACAAAGGCTTTGAAGTGTGTTCTTGCAATGGAAGACCAAGTTGTAGTGGTGTTTGGTCTGAGAGTAATGAAGATAAATCTTTGGATATGGAAACTTCAAGTAGTGGTCATTCTTGTGAATCTGTTGAAGAGGTTGAGTTTGTGATGAACAAGAAGAAAGAAAATGTAGATTGTGCTTGTTTTGATCCTCATGGATTTTTCTGTGAAAGCCCTTTTCGTTTTGCTCTTGAAAGGAGTGCTTCCTCTTCCTCCGGCCGTCGTACGCCGGAATTTTCTTCGCCGGCGGAGTCACCTAGGCGCCCCCAAATAGAGGACAAAGAAAATAATGGAGTTGATGGCGTCAACAAATTCCAATCAGGGGAAGATGAGGAAGAGAAGGAACAATTTAGTCCAGTATCTGTTTTAGATCCACTCTTTGAGGATTATGATGATGATGATGATTGCCATGAAAATGATGATGAAGAGGGTGATTTTGATATGGAGTGTAGCTACGCCAATGTACAAAGAAGCAAGCAACTACTGTTAGACAGGCTTCGTAGATTTGAGCAACTTGCAGAGTTAGATCCACTAGAACTCGAGAAAAGAATGCAAGAAGACAACGAACCATTCGAAGAAGATGATTATGAAGAAGATGAAAGCGAAGCATCAAGTGAAGAGAAGGCATTGAGAGAAATAGTTCATGAAATCCTATGCCATCCAAGTGTTCATGAAAGATGGCAAGACCAAAAAGTTCTTAAGAGACTAGTTTATGATCTCATTAAGGAGGAAGAGAAAGAACTTAATTTTTCACAAGATATGGACATTGTAATGAAAAGGGTATGCAAGAAAATGGAATTGTGGAAAGAAGTGGAATCTAACACCATTGATATGATGATAGAAGAGGATTTCTCTAGAGAGGAAATTGGGTGGAAGAAAAATGCTGAGGAGACAAAAGAGCTAGCTGGAGAGGTTGAGCTTGCTATCTTTTGTTTACTTGTTGATGAATTTTCAGAGGAATTAGTATGTTAA
Protein sequence

>Msa0163930

MMAAQKHLHELLKEDQEPFLLNNYISHKRNQIQRSSSNTTLQLKKQKPPPTRTINLCKNACFFSFQNTPDIRKSPLFEFSSPVKSPLRIPAKTASLLLEAALKIQSKKPNSKNKSFGVFGSFFKKLTQRNRSKKSENEENVSVKDILRWDSSIGRRHRKSFNNIVEEEENKGFEVCSCNGRPSCSGVWSESNEDKSLDMETSSSGHSCESVEEVEFVMNKKKENVDCACFDPHGFFCESPFRFALERSASSSSGRRTPEFSSPAESPRRPQIEDKENNGVDGVNKFQSGEDEEEKEQFSPVSVLDPLFEDYDDDDDCHENDDEEGDFDMECSYANVQRSKQLLLDRLRRFEQLAELDPLELEKRMQEDNEPFEEDDYEEDESEASSEEKALREIVHEILCHPSVHERWQDQKVLKRLVYDLIKEEEKELNFSQDMDIVMKRVCKKMELWKEVESNTIDMMIEEDFSREEIGWKKNAEETKELAGEVELAIFCLLVDEFSEELVC*