AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0072340

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072340 MtrunA17_Chr1g0179151 97.619 504 10 2 1 503 1 503 0.0 992
Msa0072340 MtrunA17_Chr7g0265901 51.796 529 172 16 2 502 1 474 8.16e-143 419
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0072340 AT5G03670.1 40.590 542 251 21 2 502 1 512 2.21e-81 262
Msa0072340 AT5G03670.2 42.319 345 146 15 2 310 1 328 4.61e-48 172
Msa0072340 AT2G36420.1 40.000 160 69 5 5 143 7 160 2.10e-25 108
Msa0072340 AT2G36420.1 32.986 288 135 9 237 503 185 435 2.88e-17 84.7

Find 102 sgRNAs with CRISPR-Local

Find 296 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AACGAAAATATTATTAAATT+AGG 0.124858 1_2:-45154227 None:intergenic
GAAAATGACAAACCTCTATT+TGG 0.129831 1_2:-45155265 None:intergenic
TATATTAATGTGGGTAAATT+TGG 0.139120 1_2:+45159523 Msa0072340:exon
TTCTTATATCTGGTGTGTTT+TGG 0.238547 1_2:-45154647 None:intergenic
TCATATAGAAAGAAAATTAA+TGG 0.247613 1_2:-45154434 None:intergenic
CTTCCTCATCTTCCCCTGAT+TGG 0.248387 1_2:-45157431 None:intergenic
AATTGTAACAAAATTCAATT+AGG 0.281165 1_2:-45159762 None:intergenic
GAAAAGGGTATGCAAGAAAA+TGG 0.283502 1_2:+45159332 Msa0072340:CDS
ACGAAAATATTATTAAATTA+GGG 0.289681 1_2:-45154226 None:intergenic
GATTTCTCTAGAGAGGAAAT+TGG 0.297301 1_2:+45159405 Msa0072340:CDS
AAAATGACAAACCTCTATTT+GGG 0.299257 1_2:-45155264 None:intergenic
TGAAGATAAATCTTTGGATA+TGG 0.335820 1_2:+45155031 Msa0072340:CDS
ACTAGTTTATGATCTCATTA+AGG 0.340770 1_2:+45159263 Msa0072340:CDS
TGAAGAAAATGTTTCTGTTA+AGG 0.341886 1_2:+45154863 Msa0072340:CDS
CCATAGGACAAAGAAAATAA+TGG 0.352123 1_2:+45157387 Msa0072340:intron
AGTGGATCTAAAACAGATAC+TGG 0.354451 1_2:-45157471 None:intergenic
ATGTAGTTGTTTAGAAGAAA+TGG 0.355784 1_2:-45154504 None:intergenic
GAGTAAAAGTGACGCTGTTT+TGG 0.359102 1_2:-45154724 None:intergenic
TACAACACTTAGGTTCTGTT+TGG 0.366656 1_2:+45154407 Msa0072340:five_prime_UTR
TTAAGGTGGGATTCTTCTAT+AGG 0.375928 1_2:+45154891 Msa0072340:CDS
TAGGATTTGTTCTTGCTGTT+GGG 0.385688 1_2:-45154777 None:intergenic
ATAGGATTTGTTCTTGCTGT+TGG 0.386274 1_2:-45154778 None:intergenic
AAAGAAAATAATGGAGTTGA+TGG 0.398403 1_2:+45157396 Msa0072340:CDS
GGCGTCAACAAATTCCAATC+AGG 0.399740 1_2:+45157417 Msa0072340:CDS
CAGAGGTTAATTGTTCTTGT+TGG 0.407819 1_2:-45154600 None:intergenic
AATATTATTAAATTAGGGCT+TGG 0.417846 1_2:-45154221 None:intergenic
ATATGAACATTGTAATGAAA+AGG 0.424196 1_2:+45159316 Msa0072340:CDS
ATTTCTCTAGAGAGGAAATT+GGG 0.428343 1_2:+45159406 Msa0072340:CDS
GACCAAGTTGTAGTGGTGTT+TGG 0.438870 1_2:+45154997 Msa0072340:CDS
GAGTAATGAAGATAAATCTT+TGG 0.439203 1_2:+45155025 Msa0072340:CDS
TATGAACATTGTAATGAAAA+GGG 0.441812 1_2:+45159317 Msa0072340:CDS
CGTACGACGGCCGGAGGAAG+AGG 0.447907 1_2:-45155204 None:intergenic
CTTTCAAGAGCAAAACGAAA+AGG 0.451999 1_2:-45155173 None:intergenic
AGGTTAATTGTTCTTGTTGG+TGG 0.454537 1_2:-45154597 None:intergenic
TGCCATCTTTCATGAACACT+TGG 0.462596 1_2:-45159219 None:intergenic
GGTTTGAAGTTTGTTTAAAG+AGG 0.470346 1_2:-45154351 None:intergenic
TTTCAAGAGCAAAACGAAAA+GGG 0.471693 1_2:-45155172 None:intergenic
GTTTGAAGTTTGTTTAAAGA+GGG 0.472670 1_2:-45154350 None:intergenic
TTAATTGTTCTTGTTGGTGG+TGG 0.477479 1_2:-45154594 None:intergenic
TTCCTCCGGCCGTCGTACGC+CGG 0.481827 1_2:+45155208 Msa0072340:CDS
CTCTTCTATCATCATATCAA+TGG 0.481856 1_2:-45159382 None:intergenic
GACAAAGGAGCTGGCTGGAG+AGG 0.482064 1_2:+45159449 Msa0072340:CDS
AAACTCCGGCGTACGACGGC+CGG 0.490483 1_2:-45155213 None:intergenic
TTGTTTCTTCAATTGTAAAG+TGG 0.491708 1_2:-45154568 None:intergenic
GAGGAATTAGTATATTAATG+TGG 0.491963 1_2:+45159513 Msa0072340:exon
GTTTGTGATGAACAAGAAGA+AGG 0.495149 1_2:+45155100 Msa0072340:CDS
CGAAGCATCAAGTGAAGAGA+AGG 0.496212 1_2:+45159161 Msa0072340:CDS
AGTAATTTACAGCATTCTCA+TGG 0.499320 1_2:-45159736 None:intergenic
GAGGAGACAAAGGAGCTGGC+TGG 0.505595 1_2:+45159444 Msa0072340:CDS
TCATAATCATCTTCTTCGAA+TGG 0.510892 1_2:-45159126 None:intergenic
ATCCAAGTGTTCATGAAAGA+TGG 0.513347 1_2:+45159217 Msa0072340:CDS
GCAAGCAACTACTGTTAGAC+AGG 0.517082 1_2:+45159031 Msa0072340:CDS
TCTTCACAATTACAACACTT+AGG 0.517148 1_2:+45154397 Msa0072340:five_prime_UTR
CATGAACACTTGGATGGCAT+AGG 0.518478 1_2:-45159209 None:intergenic
TTATTAAATTAGGGCTTGGA+AGG 0.518709 1_2:-45154217 None:intergenic
TTCGTGATTCAAATCTAGAT+AGG 0.524191 1_2:-45154287 None:intergenic
TAATGACATACTTTGTACAT+TGG 0.528025 1_2:-45157571 None:intergenic
AAGTTGAGAGAAAATTGAAG+AGG 0.530112 1_2:-45154372 None:intergenic
AGGAATTAGTATATTAATGT+GGG 0.533211 1_2:+45159514 Msa0072340:exon
TATGCAAGAAAATGGAATTG+TGG 0.534028 1_2:+45159340 Msa0072340:CDS
AATGGAATTGTGGAAAGAAG+TGG 0.536453 1_2:+45159350 Msa0072340:CDS
GACCAAACACCACTACAACT+TGG 0.539144 1_2:-45154999 None:intergenic
GGTAAATTTGGATGCAGTTG+AGG 0.540119 1_2:+45159535 Msa0072340:three_prime_UTR
CTTCAACAGATTCACAAGAA+TGG 0.541584 1_2:-45155070 None:intergenic
TGCTGAGGAGACAAAGGAGC+TGG 0.543552 1_2:+45159440 Msa0072340:CDS
TATCAAGAGGATCTATATCT+CGG 0.551276 1_2:-45159791 None:intergenic
CTTCGCCGGCAGAGTCACCT+AGG 0.551770 1_2:+45155237 Msa0072340:CDS
CAATTGTAAAGTGGTGTTTG+AGG 0.555762 1_2:-45154559 None:intergenic
TTCTTGTGAATCTGTTGAAG+AGG 0.560314 1_2:+45155073 Msa0072340:CDS
GAGACACTGAGGAAGGAATG+AGG 0.565148 1_2:-45154314 None:intergenic
GCGTCAACAAATTCCAATCA+GGG 0.566630 1_2:+45157418 Msa0072340:CDS
AACAGCAAGAACAAATCCTA+TGG 0.569803 1_2:+45154780 Msa0072340:CDS
AGGGGAAGATGAGGAAGAGA+AGG 0.569911 1_2:+45157437 Msa0072340:CDS
AGGAGTGCTTCCTCTTCCTC+CGG 0.574190 1_2:+45155194 Msa0072340:CDS
TTGGGTTTAAGGGGAAACAC+GGG 0.579571 1_2:+45159677 Msa0072340:three_prime_UTR
CATTGATATGATGATAGAAG+AGG 0.583761 1_2:+45159383 Msa0072340:CDS
ATTCCAATCAGGGGAAGATG+AGG 0.588369 1_2:+45157428 Msa0072340:CDS
TTTGGGTTTAAGGGGAAACA+CGG 0.589445 1_2:+45159676 Msa0072340:three_prime_UTR
AGAAGAGGATTTCTCTAGAG+AGG 0.590070 1_2:+45159398 Msa0072340:CDS
ATCTTTCATGAACACTTGGA+TGG 0.595411 1_2:-45159215 None:intergenic
GGCAAAAGAGAGTGAACTTG+TGG 0.596708 1_2:-45154252 None:intergenic
AGAAGAAGAGACACTGAGGA+AGG 0.603442 1_2:-45154321 None:intergenic
TCATCATAATCCTCAAAGAG+TGG 0.603702 1_2:-45157489 None:intergenic
CCATGAAAATGATGATGAAG+AGG 0.609147 1_2:+45157521 Msa0072340:CDS
ACTCTTTGAACTCTCATCAC+CGG 0.611727 1_2:+45154677 Msa0072340:CDS
AAATTTGGATGCAGTTGAGG+AGG 0.612780 1_2:+45159538 Msa0072340:three_prime_UTR
AAGAAAACTCCGGCGTACGA+CGG 0.616290 1_2:-45155217 None:intergenic
AGTTTATGATCTCATTAAGG+AGG 0.626647 1_2:+45159266 Msa0072340:CDS
CTAGATAGGTTAAAATATCG+AGG 0.627715 1_2:-45154273 None:intergenic
CTCCGGCGTACGACGGCCGG+AGG 0.628535 1_2:-45155210 None:intergenic
AAATGACAAACCTCTATTTG+GGG 0.634332 1_2:-45155263 None:intergenic
TTTGAAGTGTGTTCTTGCAA+TGG 0.636025 1_2:+45154972 Msa0072340:CDS
GGGCGCCTAGGTGACTCTGC+CGG 0.639976 1_2:-45155242 None:intergenic
GATATGGAAACTTCAAGTAG+CGG 0.643788 1_2:+45155047 Msa0072340:CDS
CATGAAAATGATGATGAAGA+GGG 0.661182 1_2:+45157522 Msa0072340:CDS
CGTCAACAAATTCCAATCAG+GGG 0.662468 1_2:+45157419 Msa0072340:CDS
GGTGATGAGAGTTCAAAGAG+TGG 0.680814 1_2:-45154675 None:intergenic
AAATAGAAGAAGAGACACTG+AGG 0.686669 1_2:-45154325 None:intergenic
AATGACAAACCTCTATTTGG+GGG 0.687845 1_2:-45155262 None:intergenic
TCTCTAGAGAGGAAATTGGG+TGG 0.688038 1_2:+45159409 Msa0072340:CDS
AATGGAAGACCAAGTTGTAG+TGG 0.692111 1_2:+45154990 Msa0072340:CDS
TCTGCCGGCGAAGAAAACTC+CGG 0.715017 1_2:-45155227 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAAATATAAAAAATACAAC+TGG + chr1_2:45154179-45154198 Msa0072340:five_prime_UTR 10.0%
!! ACGAAAATATTATTAAATTA+GGG - chr1_2:45154229-45154248 None:intergenic 10.0%
!! AACGAAAATATTATTAAATT+AGG - chr1_2:45154230-45154249 None:intergenic 10.0%
!!! TGATAATAATTAATCTTTTT+TGG - chr1_2:45156705-45156724 None:intergenic 10.0%
!!! CATTTTTGAAAATAAATTTA+TGG + chr1_2:45156836-45156855 Msa0072340:intron 10.0%
!! GGTTATTTATTTATAAATTT+GGG - chr1_2:45157253-45157272 None:intergenic 10.0%
!! ATTAGAATAATATCATAATT+GGG - chr1_2:45157348-45157367 None:intergenic 10.0%
!! AATTAGAATAATATCATAAT+TGG - chr1_2:45157349-45157368 None:intergenic 10.0%
!!! TTTTTTTGTATTAAATTTTC+AGG + chr1_2:45159006-45159025 Msa0072340:intron 10.0%
!! TCATATAGAAAGAAAATTAA+TGG - chr1_2:45154437-45154456 None:intergenic 15.0%
!!! TTAATTTTCTTTCTATATGA+TGG + chr1_2:45154437-45154456 Msa0072340:exon 15.0%
!! ATAATATTATGTAAAAGTTG+AGG + chr1_2:45155696-45155715 Msa0072340:intron 15.0%
!! AATAGTTAATAAGGATAATT+TGG - chr1_2:45156141-45156160 None:intergenic 15.0%
!! AAATTATCCTTATTAACTAT+TGG + chr1_2:45156140-45156159 Msa0072340:intron 15.0%
!!! TAGTTTTAAAAGTAATACTT+TGG + chr1_2:45156164-45156183 Msa0072340:intron 15.0%
!!! TCATTTTGAAACAATTTTTT+TGG + chr1_2:45156266-45156285 Msa0072340:intron 15.0%
!! AAAAAGAATTTATACAGATA+TGG - chr1_2:45156740-45156759 None:intergenic 15.0%
!! GGGTTATTTATTTATAAATT+TGG - chr1_2:45157254-45157273 None:intergenic 15.0%
!! TTAGAATAATATCATAATTG+GGG - chr1_2:45157347-45157366 None:intergenic 15.0%
!!! TCGTAAAAACATATTATTTT+TGG + chr1_2:45157891-45157910 Msa0072340:intron 15.0%
!!! CGTAAAAACATATTATTTTT+GGG + chr1_2:45157892-45157911 Msa0072340:intron 15.0%
!!! TTTTTATTCACAAAAAATGT+AGG + chr1_2:45157957-45157976 Msa0072340:intron 15.0%
!!! GTATTTAAATATTAAGTTGA+TGG + chr1_2:45157988-45158007 Msa0072340:intron 15.0%
!! ATATTAAATGTGTTTGTATA+AGG + chr1_2:45158374-45158393 Msa0072340:intron 15.0%
!! AATAAAAAGTTGAAATTTGA+TGG + chr1_2:45158895-45158914 Msa0072340:intron 15.0%
!!! AGAGACAAAAATTTTAATTT+GGG + chr1_2:45159659-45159678 Msa0072340:three_prime_UTR 15.0%
!!! AAAATTTTAATTTGGGTTTA+AGG + chr1_2:45159666-45159685 Msa0072340:three_prime_UTR 15.0%
!!! AAATTTTAATTTGGGTTTAA+GGG + chr1_2:45159667-45159686 Msa0072340:three_prime_UTR 15.0%
!! AATTGTAACAAAATTCAATT+AGG - chr1_2:45159765-45159784 None:intergenic 15.0%
!! AATATTATTAAATTAGGGCT+TGG - chr1_2:45154224-45154243 None:intergenic 20.0%
!!! TTTCTGTTAAGGATATTTTA+AGG + chr1_2:45154874-45154893 Msa0072340:CDS 20.0%
!! TTAAGAAACTCATAAACTTT+AGG - chr1_2:45155347-45155366 None:intergenic 20.0%
!! ATGAATAAATGAGTTATTTG+AGG - chr1_2:45155480-45155499 None:intergenic 20.0%
!!! TGTTTTGTTAAGTAGTTTAA+TGG - chr1_2:45155522-45155541 None:intergenic 20.0%
!!! AGTAAAAAATCAAAAGCATT+TGG + chr1_2:45155764-45155783 Msa0072340:intron 20.0%
!! TTTGTATTGAAAAGTGAAAT+GGG - chr1_2:45156000-45156019 None:intergenic 20.0%
!! AATGATTAAAAGAAAGAGAA+TGG + chr1_2:45156107-45156126 Msa0072340:intron 20.0%
!! AAACTAACCAATAGTTAATA+AGG - chr1_2:45156150-45156169 None:intergenic 20.0%
!! AGAAAAAGTTATTATTGCAT+TGG + chr1_2:45156227-45156246 Msa0072340:intron 20.0%
!! GTCAAAATAAAACAAATTTC+CGG - chr1_2:45156987-45157006 None:intergenic 20.0%
!!! AGATTTTGGAAAAAATTGAA+GGG - chr1_2:45157017-45157036 None:intergenic 20.0%
!! AAATATAAGCACTTATAAGA+TGG + chr1_2:45157041-45157060 Msa0072340:intron 20.0%
!!! TTCTCATTTGTATTTTTGTT+TGG + chr1_2:45157180-45157199 Msa0072340:intron 20.0%
!!! TTTGTCATTTTTTTGTTGTA+TGG + chr1_2:45158033-45158052 Msa0072340:intron 20.0%
!!! TCTTATGGTATTTTTTGTAA+CGG - chr1_2:45158108-45158127 None:intergenic 20.0%
!! TTACAAAAAATACCATAAGA+GGG + chr1_2:45158108-45158127 Msa0072340:intron 20.0%
!! AATAAAGTAGTAGAAATTTG+TGG - chr1_2:45158789-45158808 None:intergenic 20.0%
!! ATATGAACATTGTAATGAAA+AGG + chr1_2:45159316-45159335 Msa0072340:CDS 20.0%
!! TATGAACATTGTAATGAAAA+GGG + chr1_2:45159317-45159336 Msa0072340:CDS 20.0%
!! AGGAATTAGTATATTAATGT+GGG + chr1_2:45159514-45159533 Msa0072340:exon 20.0%
!! TATATTAATGTGGGTAAATT+TGG + chr1_2:45159523-45159542 Msa0072340:exon 20.0%
!!! GAGAGACAAAAATTTTAATT+TGG + chr1_2:45159658-45159677 Msa0072340:three_prime_UTR 20.0%
!!! AATTTTAATTTGGGTTTAAG+GGG + chr1_2:45159668-45159687 Msa0072340:three_prime_UTR 20.0%
!! GTTTGAAGTTTGTTTAAAGA+GGG - chr1_2:45154353-45154372 None:intergenic 25.0%
! ATGTAGTTGTTTAGAAGAAA+TGG - chr1_2:45154507-45154526 None:intergenic 25.0%
!! TTGAGGAAGATCTTTTTATT+TGG - chr1_2:45154545-45154564 None:intergenic 25.0%
!! TTGTTTCTTCAATTGTAAAG+TGG - chr1_2:45154571-45154590 None:intergenic 25.0%
!! TGAAGAAAATGTTTCTGTTA+AGG + chr1_2:45154863-45154882 Msa0072340:CDS 25.0%
!!! TGTTAAGGATATTTTAAGGT+GGG + chr1_2:45154878-45154897 Msa0072340:CDS 25.0%
! GAGTAATGAAGATAAATCTT+TGG + chr1_2:45155025-45155044 Msa0072340:CDS 25.0%
! TGAAGATAAATCTTTGGATA+TGG + chr1_2:45155031-45155050 Msa0072340:CDS 25.0%
! AAAATGACAAACCTCTATTT+GGG - chr1_2:45155267-45155286 None:intergenic 25.0%
!!! GGACAATATTTTTTTGCAAA+TGG - chr1_2:45155965-45155984 None:intergenic 25.0%
!! TGAAATGGGTCAATTTTTAT+GGG - chr1_2:45155986-45156005 None:intergenic 25.0%
! GTTTGTATTGAAAAGTGAAA+TGG - chr1_2:45156001-45156020 None:intergenic 25.0%
! GACAATGTATAAAATATGCA+AGG - chr1_2:45156615-45156634 None:intergenic 25.0%
! AGATACATGTTCATAGATTT+AGG - chr1_2:45156662-45156681 None:intergenic 25.0%
! ATACAGATATGGAAAGTAAA+CGG - chr1_2:45156729-45156748 None:intergenic 25.0%
!!! CAGATTTTGGAAAAAATTGA+AGG - chr1_2:45157018-45157037 None:intergenic 25.0%
!! GCTTATATTTGAACAGATTT+TGG - chr1_2:45157031-45157050 None:intergenic 25.0%
!!! TTCAGTTCAATAGTTTTGTT+CGG + chr1_2:45157077-45157096 Msa0072340:intron 25.0%
! TTCATCAGTAAATAGAATGT+CGG - chr1_2:45157156-45157175 None:intergenic 25.0%
! CAGTACTTGTTTCATAATTT+GGG - chr1_2:45157274-45157293 None:intergenic 25.0%
! TCAGTACTTGTTTCATAATT+TGG - chr1_2:45157275-45157294 None:intergenic 25.0%
!! AAAGAAAATAATGGAGTTGA+TGG + chr1_2:45157396-45157415 Msa0072340:CDS 25.0%
! TAATGACATACTTTGTACAT+TGG - chr1_2:45157574-45157593 None:intergenic 25.0%
!! ACGAATTTTCGTATACTTTT+GGG + chr1_2:45157766-45157785 Msa0072340:intron 25.0%
! GTTACAAAAAATACCATAAG+AGG + chr1_2:45158107-45158126 Msa0072340:intron 25.0%
! TACAAAAAATACCATAAGAG+GGG + chr1_2:45158109-45158128 Msa0072340:intron 25.0%
!! ATACTAACATCTATCTTTTG+TGG + chr1_2:45158169-45158188 Msa0072340:intron 25.0%
!! TACTAACATCTATCTTTTGT+GGG + chr1_2:45158170-45158189 Msa0072340:intron 25.0%
! AAACCACTGTAATCTTTAAA+TGG - chr1_2:45158198-45158217 None:intergenic 25.0%
! TAATGGTAAAAACAAAGAGT+AGG - chr1_2:45158266-45158285 None:intergenic 25.0%
!! CTGACATGAAAAAATTTTGT+GGG - chr1_2:45158325-45158344 None:intergenic 25.0%
!! TCTGACATGAAAAAATTTTG+TGG - chr1_2:45158326-45158345 None:intergenic 25.0%
! CTCTTGTGAATATTTAAACT+TGG + chr1_2:45158458-45158477 Msa0072340:intron 25.0%
!! TTACTGCTGTTAATAGATTT+TGG + chr1_2:45158629-45158648 Msa0072340:intron 25.0%
!! TCTATTCACTTAATTTTGGA+AGG - chr1_2:45158959-45158978 None:intergenic 25.0%
! TCCAAAATTAAGTGAATAGA+AGG + chr1_2:45158959-45158978 Msa0072340:intron 25.0%
!! TCCTTCTATTCACTTAATTT+TGG - chr1_2:45158963-45158982 None:intergenic 25.0%
! AAATTAAGTGAATAGAAGGA+TGG + chr1_2:45158963-45158982 Msa0072340:intron 25.0%
!! ACTAGTTTATGATCTCATTA+AGG + chr1_2:45159263-45159282 Msa0072340:CDS 25.0%
! GAGGAATTAGTATATTAATG+TGG + chr1_2:45159513-45159532 Msa0072340:exon 25.0%
TTATTAAATTAGGGCTTGGA+AGG - chr1_2:45154220-45154239 None:intergenic 30.0%
CTAGATAGGTTAAAATATCG+AGG - chr1_2:45154276-45154295 None:intergenic 30.0%
TTCGTGATTCAAATCTAGAT+AGG - chr1_2:45154290-45154309 None:intergenic 30.0%
! GGTTTGAAGTTTGTTTAAAG+AGG - chr1_2:45154354-45154373 None:intergenic 30.0%
AAGTTGAGAGAAAATTGAAG+AGG - chr1_2:45154375-45154394 None:intergenic 30.0%
TCTTCACAATTACAACACTT+AGG + chr1_2:45154397-45154416 Msa0072340:five_prime_UTR 30.0%
! AAAAACAAGCATTTTTGCAG+AGG - chr1_2:45154620-45154639 None:intergenic 30.0%
! TTCTTATATCTGGTGTGTTT+TGG - chr1_2:45154650-45154669 None:intergenic 30.0%
! AGTGGTGATTTTCTTATATC+TGG - chr1_2:45154660-45154679 None:intergenic 30.0%
! AACAAATCCTATGGTGTTTT+TGG + chr1_2:45154789-45154808 Msa0072340:CDS 30.0%
!! CTGTTAAGGATATTTTAAGG+TGG + chr1_2:45154877-45154896 Msa0072340:CDS 30.0%
GAAGAAGAAGAAGAAAACAA+AGG + chr1_2:45154948-45154967 Msa0072340:CDS 30.0%
TTTCAAGAGCAAAACGAAAA+GGG - chr1_2:45155175-45155194 None:intergenic 30.0%
AAATGACAAACCTCTATTTG+GGG - chr1_2:45155266-45155285 None:intergenic 30.0%
GAAAATGACAAACCTCTATT+TGG - chr1_2:45155268-45155287 None:intergenic 30.0%
CATAGATGACATATATAGCT+AGG - chr1_2:45155844-45155863 None:intergenic 30.0%
AGCTATATATGTCATCTATG+TGG + chr1_2:45155844-45155863 Msa0072340:intron 30.0%
GCTATATATGTCATCTATGT+GGG + chr1_2:45155845-45155864 Msa0072340:intron 30.0%
! GTGAAATGGGTCAATTTTTA+TGG - chr1_2:45155987-45156006 None:intergenic 30.0%
!! AAACGACACTCATTTTGAAA+CGG - chr1_2:45156058-45156077 None:intergenic 30.0%
!!! TTCAAAATGAGTGTCGTTTT+AGG + chr1_2:45156059-45156078 Msa0072340:intron 30.0%
! GTAGTGTACAGAGTATTAAT+TGG + chr1_2:45156189-45156208 Msa0072340:intron 30.0%
! TGTACAGAGTATTAATTGGA+GGG + chr1_2:45156193-45156212 Msa0072340:intron 30.0%
AGAATGTATTGAATTGAGAG+TGG - chr1_2:45156335-45156354 None:intergenic 30.0%
AGTGAAAGAGAGAGAAAAAT+GGG - chr1_2:45156412-45156431 None:intergenic 30.0%
AAGTGAAAGAGAGAGAAAAA+TGG - chr1_2:45156413-45156432 None:intergenic 30.0%
TGTATAAAATATGCAAGGTC+CGG - chr1_2:45156610-45156629 None:intergenic 30.0%
!!! ACTGTTGTGTTTGTTTTTGT+CGG + chr1_2:45156927-45156946 Msa0072340:intron 30.0%
AATATATCAGTCATAGGATC+TGG - chr1_2:45156962-45156981 None:intergenic 30.0%
! AGTTGTTGTGAATTTTCCAT+AGG + chr1_2:45157371-45157390 Msa0072340:intron 30.0%
! CCATTATTTTCTTTGTCCTA+TGG - chr1_2:45157390-45157409 None:intergenic 30.0%
CCATAGGACAAAGAAAATAA+TGG + chr1_2:45157387-45157406 Msa0072340:intron 30.0%
! CATGAAAATGATGATGAAGA+GGG + chr1_2:45157522-45157541 Msa0072340:CDS 30.0%
!! TGAGTCTTGTTAAGATGATA+TGG + chr1_2:45157734-45157753 Msa0072340:intron 30.0%
! GACGAATTTTCGTATACTTT+TGG + chr1_2:45157765-45157784 Msa0072340:intron 30.0%
GACAAATGAGTAATAAGTTG+CGG + chr1_2:45157836-45157855 Msa0072340:intron 30.0%
GTTCCATTTAAAGATTACAG+TGG + chr1_2:45158192-45158211 Msa0072340:intron 30.0%
TTTGCATTGAATGTGGAAAT+TGG + chr1_2:45158234-45158253 Msa0072340:intron 30.0%
TAAAAACAAAGAGTAGGCTA+AGG - chr1_2:45158260-45158279 None:intergenic 30.0%
CACACATTACTTATGTCTAA+TGG - chr1_2:45158283-45158302 None:intergenic 30.0%
CATTAGACATAAGTAATGTG+TGG + chr1_2:45158281-45158300 Msa0072340:intron 30.0%
TAAAGCTTAAGCATGTTTGA+TGG + chr1_2:45158408-45158427 Msa0072340:intron 30.0%
!! GCATGTTTGATGGTAATTTT+TGG + chr1_2:45158418-45158437 Msa0072340:intron 30.0%
AATGAAGCAATAACTCACAT+GGG - chr1_2:45158498-45158517 None:intergenic 30.0%
ATCTATTAACAGCAGTAACT+AGG - chr1_2:45158627-45158646 None:intergenic 30.0%
!!! CTGTTAATAGATTTTGGTTG+CGG + chr1_2:45158635-45158654 Msa0072340:intron 30.0%
!!! TGTTAATAGATTTTGGTTGC+GGG + chr1_2:45158636-45158655 Msa0072340:intron 30.0%
CTGTTGGATAAAGATCATAT+CGG - chr1_2:45158711-45158730 None:intergenic 30.0%
TTCACAACATTCAGTTAACT+AGG - chr1_2:45158836-45158855 None:intergenic 30.0%
TCATAATCATCTTCTTCGAA+TGG - chr1_2:45159129-45159148 None:intergenic 30.0%
! CTAGTCTCTTAAGAACTTTT+TGG - chr1_2:45159248-45159267 None:intergenic 30.0%
AGTTTATGATCTCATTAAGG+AGG + chr1_2:45159266-45159285 Msa0072340:CDS 30.0%
TATGCAAGAAAATGGAATTG+TGG + chr1_2:45159340-45159359 Msa0072340:CDS 30.0%
CTCTTCTATCATCATATCAA+TGG - chr1_2:45159385-45159404 None:intergenic 30.0%
CATTGATATGATGATAGAAG+AGG + chr1_2:45159383-45159402 Msa0072340:CDS 30.0%
! ATTTCTCTAGAGAGGAAATT+GGG + chr1_2:45159406-45159425 Msa0072340:CDS 30.0%
!! ACTTGTTGATGAATTTTCAG+AGG + chr1_2:45159494-45159513 Msa0072340:CDS 30.0%
AGTAATTTACAGCATTCTCA+TGG - chr1_2:45159739-45159758 None:intergenic 30.0%
AAATAGAAGAAGAGACACTG+AGG - chr1_2:45154328-45154347 None:intergenic 35.0%
TACAACACTTAGGTTCTGTT+TGG + chr1_2:45154407-45154426 Msa0072340:five_prime_UTR 35.0%
CAATTGTAAAGTGGTGTTTG+AGG - chr1_2:45154562-45154581 None:intergenic 35.0%
! TTAATTGTTCTTGTTGGTGG+TGG - chr1_2:45154597-45154616 None:intergenic 35.0%
AGGTTAATTGTTCTTGTTGG+TGG - chr1_2:45154600-45154619 None:intergenic 35.0%
CAGAGGTTAATTGTTCTTGT+TGG - chr1_2:45154603-45154622 None:intergenic 35.0%
!! TAGGATTTGTTCTTGCTGTT+GGG - chr1_2:45154780-45154799 None:intergenic 35.0%
! ATAGGATTTGTTCTTGCTGT+TGG - chr1_2:45154781-45154800 None:intergenic 35.0%
AACAGCAAGAACAAATCCTA+TGG + chr1_2:45154780-45154799 Msa0072340:CDS 35.0%
AAACGAACCAAAAACACCAT+AGG - chr1_2:45154799-45154818 None:intergenic 35.0%
TTAAGGTGGGATTCTTCTAT+AGG + chr1_2:45154891-45154910 Msa0072340:CDS 35.0%
! TTTGAAGTGTGTTCTTGCAA+TGG + chr1_2:45154972-45154991 Msa0072340:CDS 35.0%
GATATGGAAACTTCAAGTAG+CGG + chr1_2:45155047-45155066 Msa0072340:CDS 35.0%
CTTCAACAGATTCACAAGAA+TGG - chr1_2:45155073-45155092 None:intergenic 35.0%
TTCTTGTGAATCTGTTGAAG+AGG + chr1_2:45155073-45155092 Msa0072340:CDS 35.0%
GTTTGTGATGAACAAGAAGA+AGG + chr1_2:45155100-45155119 Msa0072340:CDS 35.0%
CTTTCACAGAAAAATCCATG+AGG - chr1_2:45155152-45155171 None:intergenic 35.0%
CTTTCAAGAGCAAAACGAAA+AGG - chr1_2:45155176-45155195 None:intergenic 35.0%
! CTTTTCGTTTTGCTCTTGAA+AGG + chr1_2:45155174-45155193 Msa0072340:CDS 35.0%
AATGACAAACCTCTATTTGG+GGG - chr1_2:45155265-45155284 None:intergenic 35.0%
TCTACTGAGTTATACTCATG+TGG - chr1_2:45155416-45155435 None:intergenic 35.0%
TGAGTATAACTCAGTAGACA+TGG + chr1_2:45155418-45155437 Msa0072340:intron 35.0%
! TTATTTGAGGTTCGAACATC+AGG - chr1_2:45155467-45155486 None:intergenic 35.0%
GCAAATGGCTCAGTTATTAT+GGG - chr1_2:45155950-45155969 None:intergenic 35.0%
TGCAAATGGCTCAGTTATTA+TGG - chr1_2:45155951-45155970 None:intergenic 35.0%
! GTGTACAGAGTATTAATTGG+AGG + chr1_2:45156192-45156211 Msa0072340:intron 35.0%
!! AAGCGACACTCATTTTGAAA+CGG + chr1_2:45156292-45156311 Msa0072340:intron 35.0%
! GAATGCACCAATAGTTGATA+AGG + chr1_2:45156377-45156396 Msa0072340:intron 35.0%
TGAGTGTCCTTATCAACTAT+TGG - chr1_2:45156387-45156406 None:intergenic 35.0%
AATAAGTGTGAAATGAGCCA+AGG + chr1_2:45156447-45156466 Msa0072340:intron 35.0%
ATAAGTGTGAAATGAGCCAA+GGG + chr1_2:45156448-45156467 Msa0072340:intron 35.0%
! AGCATTATTGTGTCTCCTTT+TGG + chr1_2:45156565-45156584 Msa0072340:intron 35.0%
TATAAAATATGCAAGGTCCG+GGG - chr1_2:45156608-45156627 None:intergenic 35.0%
GTATAAAATATGCAAGGTCC+GGG - chr1_2:45156609-45156628 None:intergenic 35.0%
AACTCACGAGTTAAATATGG+TGG - chr1_2:45156891-45156910 None:intergenic 35.0%
GCAAACTCACGAGTTAAATA+TGG - chr1_2:45156894-45156913 None:intergenic 35.0%
CACAACAGTACAAACAAACA+CGG - chr1_2:45156916-45156935 None:intergenic 35.0%
CCTATGACTGATATATTTGC+CGG + chr1_2:45156965-45156984 Msa0072340:intron 35.0%
! AGTGGATCTAAAACAGATAC+TGG - chr1_2:45157474-45157493 None:intergenic 35.0%
!! TGTTTTAGATCCACTCTTTG+AGG + chr1_2:45157479-45157498 Msa0072340:CDS 35.0%
TCATCATAATCCTCAAAGAG+TGG - chr1_2:45157492-45157511 None:intergenic 35.0%
! CCTCTTCATCATCATTTTCA+TGG - chr1_2:45157524-45157543 None:intergenic 35.0%
! CCATGAAAATGATGATGAAG+AGG + chr1_2:45157521-45157540 Msa0072340:CDS 35.0%
!! TGAAGAGGGTGATTTTGATA+TGG + chr1_2:45157536-45157555 Msa0072340:CDS 35.0%
ACAAAAAATGTAGGAGAGAG+TGG + chr1_2:45157966-45157985 Msa0072340:intron 35.0%
! ACAGTGGTTTTTCACTTAGA+AGG + chr1_2:45158208-45158227 Msa0072340:intron 35.0%
!! AAGGCATTTTGCATTGAATG+TGG + chr1_2:45158227-45158246 Msa0072340:intron 35.0%
GAATGAAGCAATAACTCACA+TGG - chr1_2:45158499-45158518 None:intergenic 35.0%
! GAGTTCTTCAAGACCTTTTT+AGG + chr1_2:45158551-45158570 Msa0072340:intron 35.0%
!! TTTTTAGGCATTGCAAGCTT+GGG + chr1_2:45158566-45158585 Msa0072340:intron 35.0%
GGCATAGAGAAAACAACAAT+AGG - chr1_2:45158815-45158834 None:intergenic 35.0%
GAACGAATTTCTTAGACTCT+CGG - chr1_2:45158862-45158881 None:intergenic 35.0%
!! ATTCTTTTCTCGAGTTCTAG+TGG - chr1_2:45159090-45159109 None:intergenic 35.0%
ATCTTTCATGAACACTTGGA+TGG - chr1_2:45159218-45159237 None:intergenic 35.0%
ATCCAAGTGTTCATGAAAGA+TGG + chr1_2:45159217-45159236 Msa0072340:CDS 35.0%
! GAAAAGGGTATGCAAGAAAA+TGG + chr1_2:45159332-45159351 Msa0072340:CDS 35.0%
AATGGAATTGTGGAAAGAAG+TGG + chr1_2:45159350-45159369 Msa0072340:CDS 35.0%
! GATTTCTCTAGAGAGGAAAT+TGG + chr1_2:45159405-45159424 Msa0072340:CDS 35.0%
ACTCTTTGAACTCTCATCAC+CGG + chr1_2:45154677-45154696 Msa0072340:CDS 40.0%
!! ATTCTAAGGGGACTTTTGAC+CGG - chr1_2:45154699-45154718 None:intergenic 40.0%
!!! TGTTTTGGCAGGGATTCTAA+GGG - chr1_2:45154712-45154731 None:intergenic 40.0%
! GAGTAAAAGTGACGCTGTTT+TGG - chr1_2:45154727-45154746 None:intergenic 40.0%
AATGGAAGACCAAGTTGTAG+TGG + chr1_2:45154990-45155009 Msa0072340:CDS 40.0%
!!! TGTGCTTGTTTTGATCCTCA+TGG + chr1_2:45155134-45155153 Msa0072340:CDS 40.0%
ATGGCTCAGTTATTATGGGA+CGG - chr1_2:45155946-45155965 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG - chr1_2:45156296-45156315 None:intergenic 40.0%
!!! GACACTCATTTTGAAACGGA+GGG + chr1_2:45156296-45156315 Msa0072340:intron 40.0%
AGCCAAGGGCTCAATTAAAA+TGG + chr1_2:45156462-45156481 Msa0072340:intron 40.0%
GCCAAGGGCTCAATTAAAAT+GGG + chr1_2:45156463-45156482 Msa0072340:intron 40.0%
!!! TCCCATTTTAATTGAGCCCT+TGG - chr1_2:45156467-45156486 None:intergenic 40.0%
AGGGCTCAATTAAAATGGGA+CGG + chr1_2:45156467-45156486 Msa0072340:intron 40.0%
CTCAATTAAAATGGGACGGA+GGG + chr1_2:45156471-45156490 Msa0072340:intron 40.0%
! ATTGTGTCTCCTTTTGGTAG+TGG + chr1_2:45156571-45156590 Msa0072340:intron 40.0%
CCGGCAAATATATCAGTCAT+AGG - chr1_2:45156968-45156987 None:intergenic 40.0%
GCGTCAACAAATTCCAATCA+GGG + chr1_2:45157418-45157437 Msa0072340:CDS 40.0%
CGTCAACAAATTCCAATCAG+GGG + chr1_2:45157419-45157438 Msa0072340:CDS 40.0%
! CTTTGAAGAAACGTGTACGA+CGG - chr1_2:45158077-45158096 None:intergenic 40.0%
CAAGCTTGCAATGCCTAAAA+AGG - chr1_2:45158567-45158586 None:intergenic 40.0%
!! CTTTTTAGGCATTGCAAGCT+TGG + chr1_2:45158565-45158584 Msa0072340:intron 40.0%
TCATTGCAGGCAATAGATCT+TGG - chr1_2:45158734-45158753 None:intergenic 40.0%
GATCTATTGCCTGCAATGAT+CGG + chr1_2:45158735-45158754 Msa0072340:intron 40.0%
TGCCATCTTTCATGAACACT+TGG - chr1_2:45159222-45159241 None:intergenic 40.0%
! AGAAGAGGATTTCTCTAGAG+AGG + chr1_2:45159398-45159417 Msa0072340:CDS 40.0%
GAAAAATGCTGAGGAGACAA+AGG + chr1_2:45159434-45159453 Msa0072340:CDS 40.0%
GGTAAATTTGGATGCAGTTG+AGG + chr1_2:45159535-45159554 Msa0072340:three_prime_UTR 40.0%
AAATTTGGATGCAGTTGAGG+AGG + chr1_2:45159538-45159557 Msa0072340:three_prime_UTR 40.0%
! TTTGGGTTTAAGGGGAAACA+CGG + chr1_2:45159676-45159695 Msa0072340:three_prime_UTR 40.0%
GGCAAAAGAGAGTGAACTTG+TGG - chr1_2:45154255-45154274 None:intergenic 45.0%
AGAAGAAGAGACACTGAGGA+AGG - chr1_2:45154324-45154343 None:intergenic 45.0%
GGTGATGAGAGTTCAAAGAG+TGG - chr1_2:45154678-45154697 None:intergenic 45.0%
!! GTTTTGGCAGGGATTCTAAG+GGG - chr1_2:45154711-45154730 None:intergenic 45.0%
!!! CTGTTTTGGCAGGGATTCTA+AGG - chr1_2:45154713-45154732 None:intergenic 45.0%
!!! AAAGTGACGCTGTTTTGGCA+GGG - chr1_2:45154722-45154741 None:intergenic 45.0%
!!! AAAAGTGACGCTGTTTTGGC+AGG - chr1_2:45154723-45154742 None:intergenic 45.0%
GACCAAGTTGTAGTGGTGTT+TGG + chr1_2:45154997-45155016 Msa0072340:CDS 45.0%
GACCAAACACCACTACAACT+TGG - chr1_2:45155002-45155021 None:intergenic 45.0%
GTCGATCAAGTATCCTAGTG+CGG - chr1_2:45155739-45155758 None:intergenic 45.0%
CTCAGTTATTATGGGACGGA+GGG - chr1_2:45155942-45155961 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG - chr1_2:45156295-45156314 None:intergenic 45.0%
!!! CGACACTCATTTTGAAACGG+AGG + chr1_2:45156295-45156314 Msa0072340:intron 45.0%
GCTCAATTAAAATGGGACGG+AGG + chr1_2:45156470-45156489 Msa0072340:intron 45.0%
GGCGTCAACAAATTCCAATC+AGG + chr1_2:45157417-45157436 Msa0072340:CDS 45.0%
ATTCCAATCAGGGGAAGATG+AGG + chr1_2:45157428-45157447 Msa0072340:CDS 45.0%
GAGTAATAAGTTGCGGCGTT+AGG + chr1_2:45157843-45157862 Msa0072340:intron 45.0%
! ATACCATAAGAGGGGCTAGT+CGG + chr1_2:45158117-45158136 Msa0072340:intron 45.0%
AGGCAATAGATCTTGGCTGT+TGG - chr1_2:45158727-45158746 None:intergenic 45.0%
AGAGATTCACCGATCATTGC+AGG - chr1_2:45158747-45158766 None:intergenic 45.0%
GCAAGCAACTACTGTTAGAC+AGG + chr1_2:45159031-45159050 Msa0072340:CDS 45.0%
CATGAACACTTGGATGGCAT+AGG - chr1_2:45159212-45159231 None:intergenic 45.0%
! TCTCTAGAGAGGAAATTGGG+TGG + chr1_2:45159409-45159428 Msa0072340:CDS 45.0%
TGGGTGGAAGAAAAATGCTG+AGG + chr1_2:45159425-45159444 Msa0072340:CDS 45.0%
TTGGGTTTAAGGGGAAACAC+GGG + chr1_2:45159677-45159696 Msa0072340:three_prime_UTR 45.0%
GAGACACTGAGGAAGGAATG+AGG - chr1_2:45154317-45154336 None:intergenic 50.0%
AAGAAAACTCCGGCGTACGA+CGG - chr1_2:45155220-45155239 None:intergenic 50.0%
GCTCAGTTATTATGGGACGG+AGG - chr1_2:45155943-45155962 None:intergenic 50.0%
!!! TGTCTCCTTTTGGTAGTGGC+CGG + chr1_2:45156575-45156594 Msa0072340:intron 50.0%
TGAGCTTAGCTCAGCTGGTT+GGG - chr1_2:45156637-45156656 None:intergenic 50.0%
!! CAGCTGATTTTGCAGCGAGT+TGG + chr1_2:45156864-45156883 Msa0072340:intron 50.0%
CTTCCTCATCTTCCCCTGAT+TGG - chr1_2:45157434-45157453 None:intergenic 50.0%
AGGGGAAGATGAGGAAGAGA+AGG + chr1_2:45157437-45157456 Msa0072340:CDS 50.0%
! GTTGCGGCGTTAGGCATTTT+TGG + chr1_2:45157852-45157871 Msa0072340:intron 50.0%
GGCATTGCAAGCTTGGGAAT+TGG + chr1_2:45158572-45158591 Msa0072340:intron 50.0%
!! AGGAGTGCTTCCTCTTCCTC+CGG + chr1_2:45155194-45155213 Msa0072340:CDS 55.0%
! TACGCCGGAGTTTTCTTCGC+CGG + chr1_2:45155223-45155242 Msa0072340:CDS 55.0%
TCTGCCGGCGAAGAAAACTC+CGG - chr1_2:45155230-45155249 None:intergenic 55.0%
AACCTCGTACTCTCCGCACT+AGG + chr1_2:45155723-45155742 Msa0072340:intron 55.0%
! ATCCTAGTGCGGAGAGTACG+AGG - chr1_2:45155728-45155747 None:intergenic 55.0%
!!! GTCTCCTTTTGGTAGTGGCC+GGG + chr1_2:45156576-45156595 Msa0072340:intron 55.0%
CAAACCCGGCCACTACCAAA+AGG - chr1_2:45156583-45156602 None:intergenic 55.0%
GTGAGCTTAGCTCAGCTGGT+TGG - chr1_2:45156638-45156657 None:intergenic 55.0%
AGGAGTGAGCTTAGCTCAGC+TGG - chr1_2:45156642-45156661 None:intergenic 55.0%
! TCACCGACTAGCCCCTCTTA+TGG - chr1_2:45158123-45158142 None:intergenic 55.0%
TGCTGAGGAGACAAAGGAGC+TGG + chr1_2:45159440-45159459 Msa0072340:CDS 55.0%
ACCTAGGCGCCCCCAAATAG+AGG + chr1_2:45155253-45155272 Msa0072340:CDS 60.0%
!! ACCTCTATTTGGGGGCGCCT+AGG - chr1_2:45155257-45155276 None:intergenic 60.0%
TAGTGGCCGGGTTTGAACCC+CGG + chr1_2:45156588-45156607 Msa0072340:intron 60.0%
CAAGGTCCGGGGTTCAAACC+CGG - chr1_2:45156597-45156616 None:intergenic 60.0%
GAGGAGACAAAGGAGCTGGC+TGG + chr1_2:45159444-45159463 Msa0072340:CDS 60.0%
GACAAAGGAGCTGGCTGGAG+AGG + chr1_2:45159449-45159468 Msa0072340:CDS 60.0%
AAACTCCGGCGTACGACGGC+CGG - chr1_2:45155216-45155235 None:intergenic 65.0%
CTTCGCCGGCAGAGTCACCT+AGG + chr1_2:45155237-45155256 Msa0072340:CDS 65.0%
CGTACGACGGCCGGAGGAAG+AGG - chr1_2:45155207-45155226 None:intergenic 70.0%
TTCCTCCGGCCGTCGTACGC+CGG + chr1_2:45155208-45155227 Msa0072340:CDS 70.0%
GGGCGCCTAGGTGACTCTGC+CGG - chr1_2:45155245-45155264 None:intergenic 70.0%
! CTCCGGCGTACGACGGCCGG+AGG - chr1_2:45155213-45155232 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 45154172 45159808 45154172 ID=Msa0072340;Name=Msa0072340
chr1_2 mRNA 45154172 45159808 45154172 ID=Msa0072340-mRNA-1;Parent=Msa0072340;Name=Msa0072340-mRNA-1;_AED=0.01;_eAED=0.01;_QI=281|1|1|1|1|1|3|278|504
chr1_2 exon 45154172 45155274 45154172 ID=Msa0072340-mRNA-1:exon:13605;Parent=Msa0072340-mRNA-1
chr1_2 exon 45157393 45157582 45157393 ID=Msa0072340-mRNA-1:exon:13606;Parent=Msa0072340-mRNA-1
chr1_2 exon 45159028 45159808 45159028 ID=Msa0072340-mRNA-1:exon:13607;Parent=Msa0072340-mRNA-1
chr1_2 five_prime_UTR 45154172 45154452 45154172 ID=Msa0072340-mRNA-1:five_prime_utr;Parent=Msa0072340-mRNA-1
chr1_2 CDS 45154453 45155274 45154453 ID=Msa0072340-mRNA-1:cds;Parent=Msa0072340-mRNA-1
chr1_2 CDS 45157393 45157582 45157393 ID=Msa0072340-mRNA-1:cds;Parent=Msa0072340-mRNA-1
chr1_2 CDS 45159028 45159530 45159028 ID=Msa0072340-mRNA-1:cds;Parent=Msa0072340-mRNA-1
chr1_2 three_prime_UTR 45159531 45159808 45159531 ID=Msa0072340-mRNA-1:three_prime_utr;Parent=Msa0072340-mRNA-1
Gene Sequence

>Msa0072340

ATGATGGCTGCTCAGAAGCACTTACATGAGCTACTCAAAGAAGATCAAGAACCATTTCTTCTAAACAACTACATTTCACACAAACGTAACCAAATAAAAAGATCTTCCTCAAACACCACTTTACAATTGAAGAAACAAAAACCACCACCAACAAGAACAATTAACCTCTGCAAAAATGCTTGTTTTTTCTCATTCCAAAACACACCAGATATAAGAAAATCACCACTCTTTGAACTCTCATCACCGGTCAAAAGTCCCCTTAGAATCCCTGCCAAAACAGCGTCACTTTTACTCGAAGCAGCTCTTAAAATTCAGAGTAAAAAACCCAACAGCAAGAACAAATCCTATGGTGTTTTTGGTTCGTTTTTCAAGAAACTAACTCAAAGAAACAGAAGCAAAAAGAGTGAAAATGAAGAAAATGTTTCTGTTAAGGATATTTTAAGGTGGGATTCTTCTATAGGAAGAAGACATAGAAAATCTTTCAACAACATAGTTGAAGAAGAAGAAGAAAACAAAGGCTTTGAAGTGTGTTCTTGCAATGGAAGACCAAGTTGTAGTGGTGTTTGGTCTGAGAGTAATGAAGATAAATCTTTGGATATGGAAACTTCAAGTAGCGGCCATTCTTGTGAATCTGTTGAAGAGGTTGAGTTTGTGATGAACAAGAAGAAGGAAAATGTAGATTGTGCTTGTTTTGATCCTCATGGATTTTTCTGTGAAAGCCCTTTTCGTTTTGCTCTTGAAAGGAGTGCTTCCTCTTCCTCCGGCCGTCGTACGCCGGAGTTTTCTTCGCCGGCAGAGTCACCTAGGCGCCCCCAAATAGAGGACAAAGAAAATAATGGAGTTGATGGCGTCAACAAATTCCAATCAGGGGAAGATGAGGAAGAGAAGGAACAATTTAGTCCAGTATCTGTTTTAGATCCACTCTTTGAGGATTATGATGATGATGATTGCCATGAAAATGATGATGAAGAGGGTGATTTTGATATGGAGTGTAGCTACGCCAATGTACAAAGAAGCAAGCAACTACTGTTAGACAGGCTTCGTAGATTTGAGCAACTTGCAGAGTTAGATCCACTAGAACTCGAGAAAAGAATGCAAGAAGACAACGAACCATTCGAAGAAGATGATTATGAAGAAGATGAAAGCGAAGCATCAAGTGAAGAGAAGGCATTGAGAGAAATAGTTCATGAAATCCTATGCCATCCAAGTGTTCATGAAAGATGGCAAGACCAAAAAGTTCTTAAGAGACTAGTTTATGATCTCATTAAGGAGGAAGAGAAAGAACTTAATTTTTCACAAGATATGAACATTGTAATGAAAAGGGTATGCAAGAAAATGGAATTGTGGAAAGAAGTGGAATCTAACACCATTGATATGATGATAGAAGAGGATTTCTCTAGAGAGGAAATTGGGTGGAAGAAAAATGCTGAGGAGACAAAGGAGCTGGCTGGAGAGGTTGAGCTTGCTATCTTTTGTTTACTTGTTGATGAATTTTCAGAGGAATTAGTATATTAA
Protein sequence

>Msa0072340

MMAAQKHLHELLKEDQEPFLLNNYISHKRNQIKRSSSNTTLQLKKQKPPPTRTINLCKNACFFSFQNTPDIRKSPLFELSSPVKSPLRIPAKTASLLLEAALKIQSKKPNSKNKSYGVFGSFFKKLTQRNRSKKSENEENVSVKDILRWDSSIGRRHRKSFNNIVEEEEENKGFEVCSCNGRPSCSGVWSESNEDKSLDMETSSSGHSCESVEEVEFVMNKKKENVDCACFDPHGFFCESPFRFALERSASSSSGRRTPEFSSPAESPRRPQIEDKENNGVDGVNKFQSGEDEEEKEQFSPVSVLDPLFEDYDDDDCHENDDEEGDFDMECSYANVQRSKQLLLDRLRRFEQLAELDPLELEKRMQEDNEPFEEDDYEEDESEASSEEKALREIVHEILCHPSVHERWQDQKVLKRLVYDLIKEEEKELNFSQDMNIVMKRVCKKMELWKEVESNTIDMMIEEDFSREEIGWKKNAEETKELAGEVELAIFCLLVDEFSEELVY*