Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165390 | sp|P49842|STK19_HUMAN | 29.439 | 214 | 135 | 6 | 56 | 264 | 165 | 367 | 1.73e-25 | 106 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165390 | A0A072VWP2 | 96.604 | 265 | 9 | 0 | 1 | 265 | 15 | 279 | 0.0 | 527 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0027480 | Msa0165390 | 0.975667 | 2.244074e-140 | -8.615850e-47 |
| Msa0136390 | Msa0165390 | 0.812203 | 4.770937e-51 | -8.615850e-47 |
| Msa0165390 | Msa0173740 | 0.806516 | 7.918380e-50 | -8.615850e-47 |
| Msa0165390 | Msa0173820 | 0.808620 | 2.832601e-50 | -8.615850e-47 |
| Msa0165390 | Msa0173830 | 0.813710 | 2.230100e-51 | -8.615850e-47 |
| Msa0165390 | Msa0178990 | 0.807557 | 4.768700e-50 | -8.615850e-47 |
| Msa0165390 | Msa0223100 | 0.802094 | 6.604479e-49 | -8.615850e-47 |
| Msa0165390 | Msa0223290 | 0.807701 | 4.445375e-50 | -8.615850e-47 |
| Msa0165390 | Msa0236980 | 0.804061 | 2.587892e-49 | -8.615850e-47 |
| Msa0165390 | Msa0244270 | 0.804249 | 2.365227e-49 | -8.615850e-47 |
| Msa0165390 | Msa0288240 | 0.808432 | 3.106297e-50 | -8.615850e-47 |
| Msa0165390 | Msa0328210 | 0.824313 | 8.635950e-54 | -8.615850e-47 |
| Msa0165390 | Msa1452470 | 0.802982 | 4.331285e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165390 | MtrunA17_Chr1g0183731 | 96.604 | 265 | 9 | 0 | 1 | 265 | 15 | 279 | 0.0 | 527 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0165390 | AT2G20495.1 | 63.177 | 277 | 88 | 1 | 3 | 265 | 6 | 282 | 5.86e-117 | 337 |
| Msa0165390 | AT2G20495.3 | 63.177 | 277 | 88 | 1 | 3 | 265 | 28 | 304 | 1.86e-116 | 336 |
| Msa0165390 | AT2G20495.4 | 63.177 | 277 | 88 | 1 | 3 | 265 | 28 | 304 | 1.86e-116 | 336 |
| Msa0165390 | AT2G20495.2 | 55.235 | 277 | 83 | 2 | 3 | 265 | 6 | 255 | 2.00e-94 | 278 |
| Msa0165390 | AT2G20495.5 | 61.702 | 188 | 58 | 1 | 3 | 176 | 28 | 215 | 1.04e-67 | 210 |
Find 70 sgRNAs with CRISPR-Local
Find 644 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTGTTTACGTTGGGAATT+TGG | 0.149659 | 1_4:-45842880 | None:intergenic |
| CAAGTAAATCGATGACTTTC+TGG | 0.173845 | 1_4:-45850445 | None:intergenic |
| TTTATAAATGGATATATAAT+TGG | 0.196125 | 1_4:+45850565 | Msa0165390:three_prime_UTR |
| ATTATTTCATCCTTTGATTA+AGG | 0.199441 | 1_4:+45850642 | Msa0165390:three_prime_UTR |
| TTAAGAAGTGAGCCAATATT+TGG | 0.201191 | 1_4:-45846020 | None:intergenic |
| GGAGATGATGTTGGCCGTTT+TGG | 0.216965 | 1_4:+45850293 | Msa0165390:CDS |
| CTTCGTGATTTGATTGGTTC+TGG | 0.263566 | 1_4:+45850360 | Msa0165390:CDS |
| GTTGTTTACGTTGGGAATTT+GGG | 0.272118 | 1_4:-45842879 | None:intergenic |
| AAATATTGGCTCACTTCTTA+AGG | 0.278463 | 1_4:+45846022 | Msa0165390:CDS |
| TGGATAGCAATTCCAAATAT+TGG | 0.303054 | 1_4:+45846008 | Msa0165390:CDS |
| GATTTAGTTGCTTATTGCTT+TGG | 0.339625 | 1_4:+45850518 | Msa0165390:three_prime_UTR |
| TCGCCGGCGTTTGGTGCCTT+TGG | 0.341623 | 1_4:-45842679 | None:intergenic |
| TCTCAGTCGTCGTCAATATA+AGG | 0.345742 | 1_4:+45850272 | Msa0165390:CDS |
| GGATGCCTGCATTAATTAGA+AGG | 0.346961 | 1_4:-45845151 | None:intergenic |
| GAGTGATGATGAGGTGTTTC+CGG | 0.351277 | 1_4:-45842718 | None:intergenic |
| ACAAGTGGATAGGGAATTAG+AGG | 0.366461 | 1_4:+45843040 | Msa0165390:CDS |
| CAGTATCCAGCTTTGAATCT+AGG | 0.367011 | 1_4:-45844019 | None:intergenic |
| ATTGCTATCCAATACATGTT+TGG | 0.383912 | 1_4:-45845996 | None:intergenic |
| CAGAAAGTCATCGATTTACT+TGG | 0.388972 | 1_4:+45850446 | Msa0165390:three_prime_UTR |
| TAATTAAACCAACCTGTATC+AGG | 0.391322 | 1_4:-45843288 | None:intergenic |
| TTATTGATCCAAACATGTAT+TGG | 0.394700 | 1_4:+45845988 | Msa0165390:CDS |
| AATATTGGCTCACTTCTTAA+GGG | 0.398984 | 1_4:+45846023 | Msa0165390:CDS |
| CTAGATTCAAAGCTGGATAC+TGG | 0.403549 | 1_4:+45844020 | Msa0165390:CDS |
| TTTCATCTTCGTGATTTGAT+TGG | 0.404061 | 1_4:+45850354 | Msa0165390:CDS |
| ACTTCTTAAGGGTCTTGTTC+AGG | 0.406180 | 1_4:+45846034 | Msa0165390:CDS |
| AATTGAGACTTCAATATAAA+CGG | 0.415521 | 1_4:-45842993 | None:intergenic |
| GCAGCAGACAAATCATTTCA+TGG | 0.416429 | 1_4:-45850471 | None:intergenic |
| TGTTTATACCAGTCGGAGTC+TGG | 0.426579 | 1_4:-45850398 | None:intergenic |
| TTTCGATGACTACCTGATAC+AGG | 0.431931 | 1_4:+45843276 | Msa0165390:CDS |
| CAGTGCTCACTCTTATCACT+TGG | 0.442591 | 1_4:+45845101 | Msa0165390:intron |
| GGATAGAACACAAGTGGATA+GGG | 0.450293 | 1_4:+45843031 | Msa0165390:CDS |
| TGATGAGGTGTTTCCGGCGT+CGG | 0.488956 | 1_4:-45842712 | None:intergenic |
| AGATCGTGTTGTTAAAAGAA+TGG | 0.489174 | 1_4:+45843944 | Msa0165390:CDS |
| ATTTCCCTTCTAATTAATGC+AGG | 0.491086 | 1_4:+45845146 | Msa0165390:CDS |
| TACGGAGGGATAAAGTGCTT+CGG | 0.502955 | 1_4:+45843209 | Msa0165390:CDS |
| GTTTGGATCAATAAGTTGCC+TGG | 0.512904 | 1_4:-45845979 | None:intergenic |
| CAGCTTTGAATCTAGGACAT+GGG | 0.516008 | 1_4:-45844012 | None:intergenic |
| AGGATAGAACACAAGTGGAT+AGG | 0.516568 | 1_4:+45843030 | Msa0165390:CDS |
| ATTTATTTGTGCAGTTGCTA+CGG | 0.518702 | 1_4:+45843191 | Msa0165390:intron |
| TAAAAGAATGGAAGGAAAGA+CGG | 0.526403 | 1_4:+45843956 | Msa0165390:CDS |
| TACAGCATGATCATCTTGTC+CGG | 0.530142 | 1_4:-45843248 | None:intergenic |
| CCAGCTTTGAATCTAGGACA+TGG | 0.532480 | 1_4:-45844013 | None:intergenic |
| CGTGTTGTTAAAAGAATGGA+AGG | 0.532834 | 1_4:+45843948 | Msa0165390:CDS |
| CATCCAAAGGCACCAAACGC+CGG | 0.533648 | 1_4:+45842676 | Msa0165390:CDS |
| TTACTTTGTTCAGGGAAGGA+AGG | 0.542305 | 1_4:+45850236 | Msa0165390:intron |
| AGATCTGACCAGACTCCGAC+TGG | 0.550141 | 1_4:+45850390 | Msa0165390:CDS |
| GTGCTCACTCTTATCACTTG+GGG | 0.551777 | 1_4:+45845103 | Msa0165390:intron |
| AGTGCTCACTCTTATCACTT+GGG | 0.551965 | 1_4:+45845102 | Msa0165390:intron |
| CCATGTCCTAGATTCAAAGC+TGG | 0.558260 | 1_4:+45844013 | Msa0165390:CDS |
| TCAATATAAGGAGATGATGT+TGG | 0.563090 | 1_4:+45850284 | Msa0165390:CDS |
| TATATTGACGACGACTGAGA+AGG | 0.568489 | 1_4:-45850269 | None:intergenic |
| ACTTCAGAATTCACGACGCA+TGG | 0.570222 | 1_4:+45842635 | Msa0165390:exon |
| ATATTGACGACGACTGAGAA+GGG | 0.577460 | 1_4:-45850268 | None:intergenic |
| AAAAGAATGGAAGGAAAGAC+GGG | 0.580255 | 1_4:+45843957 | Msa0165390:CDS |
| AGATGAAATCTCATATCAAG+TGG | 0.585012 | 1_4:-45850339 | None:intergenic |
| TTGTTTACGTTGGGAATTTG+GGG | 0.588572 | 1_4:-45842878 | None:intergenic |
| ATTTCAGAATCTTCATCCAA+AGG | 0.592530 | 1_4:+45842663 | Msa0165390:CDS |
| ATTTGTGCAGTTGCTACGGA+GGG | 0.601414 | 1_4:+45843195 | Msa0165390:intron |
| TTGAAGAGCGAGTAGTGTAT+CGG | 0.616190 | 1_4:-45842837 | None:intergenic |
| GATGAAATCTCATATCAAGT+GGG | 0.616247 | 1_4:-45850338 | None:intergenic |
| TGTGAAGGATAGAACACAAG+TGG | 0.616638 | 1_4:+45843025 | Msa0165390:CDS |
| GGATACTGGCATCGAACATG+AGG | 0.616710 | 1_4:+45844034 | Msa0165390:CDS |
| TATTTGTGCAGTTGCTACGG+AGG | 0.619404 | 1_4:+45843194 | Msa0165390:intron |
| GATGCCTGCATTAATTAGAA+GGG | 0.622432 | 1_4:-45845150 | None:intergenic |
| TCAATTGTATAGCAGTGTGA+AGG | 0.633361 | 1_4:+45843010 | Msa0165390:CDS |
| CGAACTGAAAATTCCGACGC+CGG | 0.636610 | 1_4:+45842699 | Msa0165390:CDS |
| TGCTCACTCTTATCACTTGG+GGG | 0.640890 | 1_4:+45845104 | Msa0165390:CDS |
| ATGAAATCTCATATCAAGTG+GGG | 0.664901 | 1_4:-45850337 | None:intergenic |
| GGAAACACCTCATCATCACT+CGG | 0.683915 | 1_4:+45842720 | Msa0165390:CDS |
| GTGTGTACCGAGTGATGATG+AGG | 0.693005 | 1_4:-45842727 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGATGTTTATTTTATTTAT+AGG | + | chr1_4:45842959-45842978 | Msa0165390:intron | 10.0% |
| !!! | TTTATTTTATTTATAGGTTT+CGG | + | chr1_4:45842965-45842984 | Msa0165390:intron | 10.0% |
| !!! | AATTTTAATTATAAAAGAAG+GGG | - | chr1_4:45843821-45843840 | None:intergenic | 10.0% |
| !!! | CAATTTTAATTATAAAAGAA+GGG | - | chr1_4:45843822-45843841 | None:intergenic | 10.0% |
| !! | ATTATAATAACTAAGTAATA+TGG | + | chr1_4:45846723-45846742 | Msa0165390:intron | 10.0% |
| !! | TTTATAAATGGATATATAAT+TGG | + | chr1_4:45850565-45850584 | Msa0165390:three_prime_UTR | 10.0% |
| !!! | TTTAAGCTTTTTAGTTTTAA+TGG | + | chr1_4:45843130-45843149 | Msa0165390:intron | 15.0% |
| !!! | ATGATTTGTATTAAGATTTA+AGG | + | chr1_4:45843165-45843184 | Msa0165390:intron | 15.0% |
| !!! | GATAAAAATATCTAAAATGA+AGG | - | chr1_4:45843788-45843807 | None:intergenic | 15.0% |
| !!! | CCAATTTTAATTATAAAAGA+AGG | - | chr1_4:45843823-45843842 | None:intergenic | 15.0% |
| !!! | CCTTCTTTTATAATTAAAAT+TGG | + | chr1_4:45843820-45843839 | Msa0165390:intron | 15.0% |
| !!! | GTTTGATTTTTATTGAATTA+AGG | - | chr1_4:45844419-45844438 | None:intergenic | 15.0% |
| !! | ATCAAAGTAAAAATTTAACA+TGG | - | chr1_4:45844994-45845013 | None:intergenic | 15.0% |
| !! | AAAAAAATATGAAGTTTACT+TGG | - | chr1_4:45845311-45845330 | None:intergenic | 15.0% |
| !!! | GTAATATGGAAATTAATTTT+AGG | + | chr1_4:45846737-45846756 | Msa0165390:intron | 15.0% |
| !! | ATAATATCAAATGATATGAA+AGG | + | chr1_4:45846823-45846842 | Msa0165390:intron | 15.0% |
| !! | AAAACTAAAGTAAAAAGATA+AGG | - | chr1_4:45849016-45849035 | None:intergenic | 15.0% |
| !!! | TTATCTTTTTACTTTAGTTT+TGG | + | chr1_4:45849015-45849034 | Msa0165390:intron | 15.0% |
| !!! | TTTATAATGTTTGTGTATTT+TGG | + | chr1_4:45850176-45850195 | Msa0165390:intron | 15.0% |
| !! | AATTGAGACTTCAATATAAA+CGG | - | chr1_4:45842996-45843015 | None:intergenic | 20.0% |
| !! | TAAATATAAACCATTTACTC+CGG | - | chr1_4:45843577-45843596 | None:intergenic | 20.0% |
| !! | ATATTTAAATGTACGTGATA+AGG | + | chr1_4:45843590-45843609 | Msa0165390:intron | 20.0% |
| !! | ATTGTATGTATATATGTCTT+CGG | + | chr1_4:45843685-45843704 | Msa0165390:intron | 20.0% |
| !! | TAATTAAAATTGGATGTCTT+TGG | + | chr1_4:45843830-45843849 | Msa0165390:intron | 20.0% |
| !!! | AAAAACAATTCCGTTTTTTA+TGG | - | chr1_4:45844677-45844696 | None:intergenic | 20.0% |
| !!! | AAAAAACGGAATTGTTTTTT+TGG | + | chr1_4:45844678-45844697 | Msa0165390:intron | 20.0% |
| !!! | AATTGTTTTTTTGGAACTTT+TGG | + | chr1_4:45844687-45844706 | Msa0165390:intron | 20.0% |
| !!! | ACTTTGATTTTAAATCATGT+AGG | + | chr1_4:45845006-45845025 | Msa0165390:intron | 20.0% |
| !!! | ATATTTTTTTTTTGCCAATG+TGG | + | chr1_4:45845321-45845340 | Msa0165390:intron | 20.0% |
| !! | AAAACAAAAAAAACGCTTAA+AGG | - | chr1_4:45845589-45845608 | None:intergenic | 20.0% |
| !! | ATATTATATGCCTAATCAAA+GGG | - | chr1_4:45845725-45845744 | None:intergenic | 20.0% |
| !! | AATATTATATGCCTAATCAA+AGG | - | chr1_4:45845726-45845745 | None:intergenic | 20.0% |
| !!! | ATCTTTAATTTATAACTGCT+AGG | + | chr1_4:45845774-45845793 | Msa0165390:intron | 20.0% |
| !! | TAAACAACGTTAAAGTAAAA+GGG | - | chr1_4:45845821-45845840 | None:intergenic | 20.0% |
| !! | ATAAACAACGTTAAAGTAAA+AGG | - | chr1_4:45845822-45845841 | None:intergenic | 20.0% |
| !! | ATAATTATGTATAATGACTC+TGG | + | chr1_4:45845941-45845960 | Msa0165390:intron | 20.0% |
| !! | AGTTTAATCTATATCATTTG+TGG | + | chr1_4:45846107-45846126 | Msa0165390:intron | 20.0% |
| !! | AGCATAAATATAAGTCATTT+AGG | + | chr1_4:45846466-45846485 | Msa0165390:intron | 20.0% |
| !!! | GTCATTTTCTTTGAATTTTT+TGG | - | chr1_4:45847169-45847188 | None:intergenic | 20.0% |
| !! | TACATGAATGAATAATAGAA+TGG | - | chr1_4:45847833-45847852 | None:intergenic | 20.0% |
| !! | ACAAACATTATAAATTTCCA+TGG | - | chr1_4:45850170-45850189 | None:intergenic | 20.0% |
| !!! | TAATTGTTTTACTTTGTTCA+GGG | + | chr1_4:45850228-45850247 | Msa0165390:intron | 20.0% |
| !! | ATTATTTCATCCTTTGATTA+AGG | + | chr1_4:45850642-45850661 | Msa0165390:three_prime_UTR | 20.0% |
| !!! | TAAACTTTTTCCTTAATCAA+AGG | - | chr1_4:45850655-45850674 | None:intergenic | 20.0% |
| !! | TAGTTAATGTTGTTTACGTT+GGG | - | chr1_4:45842890-45842909 | None:intergenic | 25.0% |
| !! | ATAGTTAATGTTGTTTACGT+TGG | - | chr1_4:45842891-45842910 | None:intergenic | 25.0% |
| !! | AATTAGAGGTTTGTTTGTTT+AGG | + | chr1_4:45843054-45843073 | Msa0165390:intron | 25.0% |
| !!! | GCTTTTTAGTTTTAATGGAT+TGG | + | chr1_4:45843135-45843154 | Msa0165390:intron | 25.0% |
| !! | CGGCTTTTTAAATTAAATAC+CGG | + | chr1_4:45843229-45843248 | Msa0165390:CDS | 25.0% |
| ! | TGAAAACGACTTATAGAATA+TGG | - | chr1_4:45843424-45843443 | None:intergenic | 25.0% |
| ! | TAGCTCATATGAAAAAACTT+TGG | + | chr1_4:45843451-45843470 | Msa0165390:intron | 25.0% |
| ! | TGGAAATGATTAAACAGTAT+AGG | - | chr1_4:45844087-45844106 | None:intergenic | 25.0% |
| ! | CATCAGAAATCTTTATAATC+TGG | + | chr1_4:45844131-45844150 | Msa0165390:intron | 25.0% |
| ! | CAAAACTCTTGAATACAAAA+TGG | + | chr1_4:45844544-45844563 | Msa0165390:intron | 25.0% |
| ! | TGACAAATGAGTGTATAATT+AGG | - | chr1_4:45845430-45845449 | None:intergenic | 25.0% |
| ! | TGTCATATCTTTCTTTCATT+CGG | + | chr1_4:45845445-45845464 | Msa0165390:intron | 25.0% |
| ! | TCAAAGCATGAAATAAGATA+AGG | - | chr1_4:45845677-45845696 | None:intergenic | 25.0% |
| ! | TTATTGATCCAAACATGTAT+TGG | + | chr1_4:45845988-45846007 | Msa0165390:CDS | 25.0% |
| !!! | AGTTAAGAGTGTTAGATAAA+AGG | + | chr1_4:45846262-45846281 | Msa0165390:intron | 25.0% |
| ! | AATAAGAGCTTGAACATTAT+TGG | + | chr1_4:45846293-45846312 | Msa0165390:intron | 25.0% |
| ! | AAACACTATCTCCTATTTAT+AGG | + | chr1_4:45846350-45846369 | Msa0165390:intron | 25.0% |
| ! | AACACTATCTCCTATTTATA+GGG | + | chr1_4:45846351-45846370 | Msa0165390:intron | 25.0% |
| ! | ACACCAAATCAAAATCATTT+AGG | - | chr1_4:45846586-45846605 | None:intergenic | 25.0% |
| !!! | AAATGATTTTGATTTGGTGT+TGG | + | chr1_4:45846586-45846605 | Msa0165390:intron | 25.0% |
| !!! | AATGATTTTGATTTGGTGTT+GGG | + | chr1_4:45846587-45846606 | Msa0165390:intron | 25.0% |
| ! | AAACACTATCTCCTATTTAT+AGG | + | chr1_4:45846350-45846369 | Msa0165390:intron | 25.0% |
| ! | AACACTATCTCCTATTTATA+GGG | + | chr1_4:45846351-45846370 | Msa0165390:intron | 25.0% |
| !! | GATATTCTGAGAATATAAAC+TGG | + | chr1_4:45846771-45846790 | Msa0165390:intron | 25.0% |
| !! | TAAAATGATAGTGTGATGAA+GGG | - | chr1_4:45846954-45846973 | None:intergenic | 25.0% |
| !!! | CACACTATCATTTTAGTTTT+TGG | + | chr1_4:45846959-45846978 | Msa0165390:intron | 25.0% |
| ! | TTACATGAATGAACAATAGA+AGG | - | chr1_4:45847570-45847589 | None:intergenic | 25.0% |
| ! | GACGATAATAGTTATAGTTT+CGG | - | chr1_4:45848364-45848383 | None:intergenic | 25.0% |
| ! | GAAACTATAACTATTATCGT+CGG | + | chr1_4:45848363-45848382 | Msa0165390:intron | 25.0% |
| ! | GTTCTTATAGATTGGAATTA+AGG | - | chr1_4:45848570-45848589 | None:intergenic | 25.0% |
| ! | AATTCCAATCTATAAGAACA+AGG | + | chr1_4:45848571-45848590 | Msa0165390:intron | 25.0% |
| ! | ATTCCAATCTATAAGAACAA+GGG | + | chr1_4:45848572-45848591 | Msa0165390:intron | 25.0% |
| ! | AGTAAAAAGATAAGGACTTA+GGG | - | chr1_4:45849008-45849027 | None:intergenic | 25.0% |
| ! | AAGTAAAAAGATAAGGACTT+AGG | - | chr1_4:45849009-45849028 | None:intergenic | 25.0% |
| !!! | TAGAAAAGTTGGTAGAAAAT+AGG | + | chr1_4:45849617-45849636 | Msa0165390:intron | 25.0% |
| !! | GTTTCTCTAATAGTTTTCTT+AGG | - | chr1_4:45849742-45849761 | None:intergenic | 25.0% |
| ! | AACCATTAGAAAAGATTTAG+AGG | + | chr1_4:45849759-45849778 | Msa0165390:intron | 25.0% |
| ! | AATAGACATCAGAACAAAAA+TGG | - | chr1_4:45850000-45850019 | None:intergenic | 25.0% |
| !! | TTGAGTTATTTCATTCTGAT+TGG | + | chr1_4:45850068-45850087 | Msa0165390:intron | 25.0% |
| !! | TGAGTTATTTCATTCTGATT+GGG | + | chr1_4:45850069-45850088 | Msa0165390:intron | 25.0% |
| !!! | GTAATTGTTTTACTTTGTTC+AGG | + | chr1_4:45850227-45850246 | Msa0165390:intron | 25.0% |
| !!! | ATTTTGATGTTTATACCAGT+CGG | - | chr1_4:45850408-45850427 | None:intergenic | 25.0% |
| ATTTCAGAATCTTCATCCAA+AGG | + | chr1_4:45842663-45842682 | Msa0165390:CDS | 30.0% | |
| AACGTGTAAAGAAAGAGAAA+TGG | - | chr1_4:45842773-45842792 | None:intergenic | 30.0% | |
| ATTTATTTGTGCAGTTGCTA+CGG | + | chr1_4:45843191-45843210 | Msa0165390:intron | 30.0% | |
| TAATTAAACCAACCTGTATC+AGG | - | chr1_4:45843291-45843310 | None:intergenic | 30.0% | |
| AAACTACTGTGAGAGATTTA+GGG | + | chr1_4:45843349-45843368 | Msa0165390:intron | 30.0% | |
| !! | AATTGTCTTGTTTGAGCTTA+TGG | + | chr1_4:45843381-45843400 | Msa0165390:intron | 30.0% |
| ACATGTACATAAGCACATTT+AGG | + | chr1_4:45843501-45843520 | Msa0165390:intron | 30.0% | |
| TTGACAAATGTTTGGTTGTT+TGG | + | chr1_4:45843654-45843673 | Msa0165390:intron | 30.0% | |
| ! | AATATCTAAAATGAAGGCAC+TGG | - | chr1_4:45843782-45843801 | None:intergenic | 30.0% |
| AGTTAGAAGAATTAACACGA+CGG | - | chr1_4:45843910-45843929 | None:intergenic | 30.0% | |
| ! | AGATCGTGTTGTTAAAAGAA+TGG | + | chr1_4:45843944-45843963 | Msa0165390:CDS | 30.0% |
| TAAAAGAATGGAAGGAAAGA+CGG | + | chr1_4:45843956-45843975 | Msa0165390:CDS | 30.0% | |
| TTTATAATCTGGCTAATGTC+CGG | + | chr1_4:45844142-45844161 | Msa0165390:intron | 30.0% | |
| CAATATGAATATCTGACACA+TGG | + | chr1_4:45844186-45844205 | Msa0165390:intron | 30.0% | |
| TAGTAAGCTGCCAATTAATT+TGG | - | chr1_4:45844522-45844541 | None:intergenic | 30.0% | |
| !!! | TGTTTTTTTGGAACTTTTGG+TGG | + | chr1_4:45844690-45844709 | Msa0165390:intron | 30.0% |
| !!! | GTTTTTTTGGAACTTTTGGT+GGG | + | chr1_4:45844691-45844710 | Msa0165390:intron | 30.0% |
| ! | TGATTTTAAATCATGTAGGC+TGG | + | chr1_4:45845010-45845029 | Msa0165390:intron | 30.0% |
| ACTCGTTTAGTAAATATCCT+GGG | - | chr1_4:45845052-45845071 | None:intergenic | 30.0% | |
| AACTCGTTTAGTAAATATCC+TGG | - | chr1_4:45845053-45845072 | None:intergenic | 30.0% | |
| !!! | TAAACGAGTTTTTTTGCTGA+TGG | + | chr1_4:45845063-45845082 | Msa0165390:intron | 30.0% |
| ATTTCCCTTCTAATTAATGC+AGG | + | chr1_4:45845146-45845165 | Msa0165390:CDS | 30.0% | |
| TCAACTTCATTTCCTGTAAA+TGG | + | chr1_4:45845285-45845304 | Msa0165390:intron | 30.0% | |
| TTTGGTATTGTAAACCACAT+TGG | - | chr1_4:45845338-45845357 | None:intergenic | 30.0% | |
| !!! | AAAGTGAATGCTACTGATTT+TGG | - | chr1_4:45845356-45845375 | None:intergenic | 30.0% |
| ATGAAACAACTGTTATCTTG+TGG | + | chr1_4:45845386-45845405 | Msa0165390:intron | 30.0% | |
| AATGTACGATAAGATCAAAC+AGG | - | chr1_4:45845513-45845532 | None:intergenic | 30.0% | |
| GAAAGTTTGTCTTGTATTGT+AGG | - | chr1_4:45845703-45845722 | None:intergenic | 30.0% | |
| ATATAATCAACATAAGCAGC+AGG | - | chr1_4:45845752-45845771 | None:intergenic | 30.0% | |
| AAGTAAAAGGGAAATTTGTG+TGG | - | chr1_4:45845809-45845828 | None:intergenic | 30.0% | |
| ATATATACGCACACATGTTA+TGG | - | chr1_4:45845900-45845919 | None:intergenic | 30.0% | |
| ! | TGTGCGTATATATGTTCTTT+TGG | + | chr1_4:45845907-45845926 | Msa0165390:intron | 30.0% |
| ATTGCTATCCAATACATGTT+TGG | - | chr1_4:45845999-45846018 | None:intergenic | 30.0% | |
| TGGATAGCAATTCCAAATAT+TGG | + | chr1_4:45846008-45846027 | Msa0165390:CDS | 30.0% | |
| TTAAGAAGTGAGCCAATATT+TGG | - | chr1_4:45846023-45846042 | None:intergenic | 30.0% | |
| !! | AAATATTGGCTCACTTCTTA+AGG | + | chr1_4:45846022-45846041 | Msa0165390:CDS | 30.0% |
| !! | AATATTGGCTCACTTCTTAA+GGG | + | chr1_4:45846023-45846042 | Msa0165390:CDS | 30.0% |
| ATTTGTGGTCATGTATAACA+TGG | + | chr1_4:45846122-45846141 | Msa0165390:intron | 30.0% | |
| ! | AACATGGACCATCTTTTAAA+TGG | + | chr1_4:45846138-45846157 | Msa0165390:intron | 30.0% |
| CCAATAGACCATTTAAAAGA+TGG | - | chr1_4:45846149-45846168 | None:intergenic | 30.0% | |
| ! | CCATCTTTTAAATGGTCTAT+TGG | + | chr1_4:45846146-45846165 | Msa0165390:intron | 30.0% |
| AGTCACATATCCCTATAAAT+AGG | - | chr1_4:45846364-45846383 | None:intergenic | 30.0% | |
| GTAAATAGGAGATAGTGTTT+AGG | - | chr1_4:45846393-45846412 | None:intergenic | 30.0% | |
| AAACACTATCTCCTATTTAC+AGG | + | chr1_4:45846393-45846412 | Msa0165390:intron | 30.0% | |
| AACACTATCTCCTATTTACA+GGG | + | chr1_4:45846394-45846413 | Msa0165390:intron | 30.0% | |
| AGACTAAACACTAAACACTT+TGG | + | chr1_4:45846422-45846441 | Msa0165390:intron | 30.0% | |
| ! | GGGAAAAGTATGAAAAAGAA+AGG | + | chr1_4:45846504-45846523 | Msa0165390:intron | 30.0% |
| !!! | GTGCCTAAATGATTTTGATT+TGG | + | chr1_4:45846580-45846599 | Msa0165390:intron | 30.0% |
| AGTCTCAAATCCCTATAAAT+AGG | - | chr1_4:45846673-45846692 | None:intergenic | 30.0% | |
| TGTTTCTTGCTTTCTCATTT+AGG | - | chr1_4:45846702-45846721 | None:intergenic | 30.0% | |
| TGGTTCCAAGAAATAAACTA+AGG | + | chr1_4:45846791-45846810 | Msa0165390:intron | 30.0% | |
| ! | GAGTACCTTAGTTTATTTCT+TGG | - | chr1_4:45846799-45846818 | None:intergenic | 30.0% |
| ! | AATTAAGAATAAGAGAGTGC+AGG | + | chr1_4:45846873-45846892 | Msa0165390:intron | 30.0% |
| ! | AAAATGATAGTGTGATGAAG+GGG | - | chr1_4:45846953-45846972 | None:intergenic | 30.0% |
| ! | CTAAAATGATAGTGTGATGA+AGG | - | chr1_4:45846955-45846974 | None:intergenic | 30.0% |
| TTAGGTAATTGACAGTACTT+GGG | + | chr1_4:45847314-45847333 | Msa0165390:intron | 30.0% | |
| AATCCACTACATGGAATTTA+AGG | + | chr1_4:45847927-45847946 | Msa0165390:intron | 30.0% | |
| ATCCACTACATGGAATTTAA+GGG | + | chr1_4:45847928-45847947 | Msa0165390:intron | 30.0% | |
| !! | ATATTCTGAAATACCTGAAG+AGG | + | chr1_4:45848042-45848061 | Msa0165390:intron | 30.0% |
| AAGTGTATTAAGGATGAAGA+GGG | + | chr1_4:45848218-45848237 | Msa0165390:intron | 30.0% | |
| AGAGAGATATTAAGGATAGA+TGG | + | chr1_4:45848258-45848277 | Msa0165390:intron | 30.0% | |
| TTCCACAACTTATTTAACGA+AGG | + | chr1_4:45848290-45848309 | Msa0165390:intron | 30.0% | |
| ATCCTTCGTTAAATAAGTTG+TGG | - | chr1_4:45848295-45848314 | None:intergenic | 30.0% | |
| ! | AACTTTTCAACGAGATTATG+AGG | + | chr1_4:45848510-45848529 | Msa0165390:intron | 30.0% |
| TTCCAATCTATAAGAACAAG+GGG | + | chr1_4:45848573-45848592 | Msa0165390:intron | 30.0% | |
| !! | GCACTTAGTTTTCATTGATT+TGG | + | chr1_4:45848802-45848821 | Msa0165390:intron | 30.0% |
| !!! | AGTTTTCATTGATTTGGAGA+AGG | + | chr1_4:45848808-45848827 | Msa0165390:intron | 30.0% |
| TATTGTTATGGGAAAATCTC+CGG | - | chr1_4:45848966-45848985 | None:intergenic | 30.0% | |
| !!! | TTTAGTTTTGGATGTACTGA+CGG | + | chr1_4:45849027-45849046 | Msa0165390:intron | 30.0% |
| TAGAAACAAGACGGAATATA+TGG | + | chr1_4:45849186-45849205 | Msa0165390:intron | 30.0% | |
| TGGAATGTAACTTCAGTAAA+AGG | + | chr1_4:45849206-45849225 | Msa0165390:intron | 30.0% | |
| ATATCTAAACCGTGTAACTT+GGG | - | chr1_4:45849278-45849297 | None:intergenic | 30.0% | |
| TTACACGGTTTAGATATCTT+GGG | + | chr1_4:45849281-45849300 | Msa0165390:intron | 30.0% | |
| ! | TCTACCAACTTTTCTACTAT+AGG | - | chr1_4:45849613-45849632 | None:intergenic | 30.0% |
| ! | GACCTCTAAATCTTTTCTAA+TGG | - | chr1_4:45849764-45849783 | None:intergenic | 30.0% |
| GTTCTATCAAAGACCATATT+TGG | - | chr1_4:45849799-45849818 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr1_4:45849803-45849822 | Msa0165390:intron | 30.0% | |
| TCTTTGATAGAACATTATGG+CGG | + | chr1_4:45849806-45849825 | Msa0165390:intron | 30.0% | |
| CTACATAGGATAGATATATC+CGG | - | chr1_4:45850024-45850043 | None:intergenic | 30.0% | |
| GATATATCTATCCTATGTAG+TGG | + | chr1_4:45850024-45850043 | Msa0165390:intron | 30.0% | |
| ! | GAGTTATTTCATTCTGATTG+GGG | + | chr1_4:45850070-45850089 | Msa0165390:intron | 30.0% |
| !!! | GTTTGTGTATTTTGGTCTTT+AGG | + | chr1_4:45850184-45850203 | Msa0165390:intron | 30.0% |
| TCAATATAAGGAGATGATGT+TGG | + | chr1_4:45850284-45850303 | Msa0165390:CDS | 30.0% | |
| ATGAAATCTCATATCAAGTG+GGG | - | chr1_4:45850340-45850359 | None:intergenic | 30.0% | |
| GATGAAATCTCATATCAAGT+GGG | - | chr1_4:45850341-45850360 | None:intergenic | 30.0% | |
| AGATGAAATCTCATATCAAG+TGG | - | chr1_4:45850342-45850361 | None:intergenic | 30.0% | |
| TTTCATCTTCGTGATTTGAT+TGG | + | chr1_4:45850354-45850373 | Msa0165390:CDS | 30.0% | |
| GATTTAGTTGCTTATTGCTT+TGG | + | chr1_4:45850518-45850537 | Msa0165390:three_prime_UTR | 30.0% | |
| ! | ATGGAGGTGTAGAATTGAAA+AGG | - | chr1_4:45842754-45842773 | None:intergenic | 35.0% |
| GTGTAAAGAAAGAGAAATGG+AGG | - | chr1_4:45842770-45842789 | None:intergenic | 35.0% | |
| TTGTTTACGTTGGGAATTTG+GGG | - | chr1_4:45842881-45842900 | None:intergenic | 35.0% | |
| GTTGTTTACGTTGGGAATTT+GGG | - | chr1_4:45842882-45842901 | None:intergenic | 35.0% | |
| ! | TGTTGTTTACGTTGGGAATT+TGG | - | chr1_4:45842883-45842902 | None:intergenic | 35.0% |
| TCAATTGTATAGCAGTGTGA+AGG | + | chr1_4:45843010-45843029 | Msa0165390:CDS | 35.0% | |
| CTAAATCTCTCACAGTAGTT+TGG | - | chr1_4:45843350-45843369 | None:intergenic | 35.0% | |
| CAAACTACTGTGAGAGATTT+AGG | + | chr1_4:45843348-45843367 | Msa0165390:intron | 35.0% | |
| AAACATTTGTCAACTAGGAG+AGG | - | chr1_4:45843647-45843666 | None:intergenic | 35.0% | |
| TCTCCTAGTTGACAAATGTT+TGG | + | chr1_4:45843646-45843665 | Msa0165390:intron | 35.0% | |
| CAACCAAACATTTGTCAACT+AGG | - | chr1_4:45843652-45843671 | None:intergenic | 35.0% | |
| GGTCACAAGAATGTATTGTT+GGG | + | chr1_4:45843706-45843725 | Msa0165390:intron | 35.0% | |
| GTCACAAGAATGTATTGTTG+GGG | + | chr1_4:45843707-45843726 | Msa0165390:intron | 35.0% | |
| ! | CGTGTTGTTAAAAGAATGGA+AGG | + | chr1_4:45843948-45843967 | Msa0165390:CDS | 35.0% |
| AAAAGAATGGAAGGAAAGAC+GGG | + | chr1_4:45843957-45843976 | Msa0165390:CDS | 35.0% | |
| !! | CAGAATGTGAAGTTTTTGAG+TGG | + | chr1_4:45843982-45844001 | Msa0165390:CDS | 35.0% |
| GAAACAGATTGTGTATGTGT+TGG | + | chr1_4:45844453-45844472 | Msa0165390:intron | 35.0% | |
| ACTGACCTTCTCTTTCTTTA+TGG | - | chr1_4:45844482-45844501 | None:intergenic | 35.0% | |
| ATAAAGAAAGAGAAGGTCAG+TGG | + | chr1_4:45844481-45844500 | Msa0165390:intron | 35.0% | |
| GGGAATAGCTCCAAATTAAT+TGG | + | chr1_4:45844509-45844528 | Msa0165390:intron | 35.0% | |
| CAGAAAACCCCAAATTTACA+CGG | - | chr1_4:45844616-45844635 | None:intergenic | 35.0% | |
| !! | TAAATTTGGGGTTTTCTGGA+GGG | + | chr1_4:45844618-45844637 | Msa0165390:intron | 35.0% |
| TTATGGATCAGTCCTGAAAT+CGG | - | chr1_4:45844660-45844679 | None:intergenic | 35.0% | |
| CAGGACTGATCCATAAAAAA+CGG | + | chr1_4:45844664-45844683 | Msa0165390:intron | 35.0% | |
| ! | CCTGGAATACAATGTCATTT+GGG | + | chr1_4:45844820-45844839 | Msa0165390:intron | 35.0% |
| TGACATGTTCACATATACAG+TGG | + | chr1_4:45844925-45844944 | Msa0165390:intron | 35.0% | |
| ATGGCAAACTTGAAAATGTC+TGG | - | chr1_4:45844975-45844994 | None:intergenic | 35.0% | |
| GTCAATATATATCTTAGCCC+AGG | + | chr1_4:45845032-45845051 | Msa0165390:intron | 35.0% | |
| TTTGCTGATGGTTGTTTGTT+TGG | + | chr1_4:45845075-45845094 | Msa0165390:intron | 35.0% | |
| GATGCCTGCATTAATTAGAA+GGG | - | chr1_4:45845153-45845172 | None:intergenic | 35.0% | |
| TGCAATCCATTTCACTTACA+AGG | - | chr1_4:45845175-45845194 | None:intergenic | 35.0% | |
| ! | GATTGCATCATTGCTCATTT+TGG | + | chr1_4:45845188-45845207 | Msa0165390:intron | 35.0% |
| TAAACTGTCACAACTTTGCT+TGG | + | chr1_4:45845235-45845254 | Msa0165390:intron | 35.0% | |
| AAGTTTACTTGGCCATTTAC+AGG | - | chr1_4:45845300-45845319 | None:intergenic | 35.0% | |
| GATAAGATCAAACAGGAAAC+TGG | - | chr1_4:45845506-45845525 | None:intergenic | 35.0% | |
| ATTAGCTGCATTGAGAATCT+TGG | + | chr1_4:45845644-45845663 | Msa0165390:intron | 35.0% | |
| GCATGAAATAAGATAAGGAG+TGG | - | chr1_4:45845672-45845691 | None:intergenic | 35.0% | |
| GACAAACTTTCCCTTTGATT+AGG | + | chr1_4:45845712-45845731 | Msa0165390:intron | 35.0% | |
| TGTTATGGATGCAACTAAAC+AGG | - | chr1_4:45845885-45845904 | None:intergenic | 35.0% | |
| GTTTACCATGTCTTTATGTC+TGG | + | chr1_4:45846071-45846090 | Msa0165390:intron | 35.0% | |
| TAAACCGTCCGATTAAATAG+AGG | + | chr1_4:45846217-45846236 | Msa0165390:intron | 35.0% | |
| TCTACCTCTATTTAATCGGA+CGG | - | chr1_4:45846224-45846243 | None:intergenic | 35.0% | |
| TCCGATTAAATAGAGGTAGA+AGG | + | chr1_4:45846224-45846243 | Msa0165390:intron | 35.0% | |
| CCCTTCTACCTCTATTTAAT+CGG | - | chr1_4:45846228-45846247 | None:intergenic | 35.0% | |
| CCGATTAAATAGAGGTAGAA+GGG | + | chr1_4:45846225-45846244 | Msa0165390:intron | 35.0% | |
| ATTAAATAGAGGTAGAAGGG+TGG | + | chr1_4:45846228-45846247 | Msa0165390:intron | 35.0% | |
| AGTCTCATATCCCTGTAAAT+AGG | - | chr1_4:45846407-45846426 | None:intergenic | 35.0% | |
| ! | AAATGATAGTGTGATGAAGG+GGG | - | chr1_4:45846952-45846971 | None:intergenic | 35.0% |
| GAAATCTGTGGGATAATTGA+TGG | - | chr1_4:45847129-45847148 | None:intergenic | 35.0% | |
| TCAATTATCCCACAGATTTC+AGG | + | chr1_4:45847129-45847148 | Msa0165390:intron | 35.0% | |
| CTTAGGTAATTGACAGTACT+TGG | + | chr1_4:45847313-45847332 | Msa0165390:intron | 35.0% | |
| ATTTCTCGAGAGATTGAAAG+AGG | + | chr1_4:45847379-45847398 | Msa0165390:intron | 35.0% | |
| AATCCGCTACATGGAATTTA+AGG | + | chr1_4:45847661-45847680 | Msa0165390:intron | 35.0% | |
| ATCCGCTACATGGAATTTAA+GGG | + | chr1_4:45847662-45847681 | Msa0165390:intron | 35.0% | |
| !! | GAATTTAAGGGCATTGTGTT+GGG | + | chr1_4:45847674-45847693 | Msa0165390:intron | 35.0% |
| TGTATCTATGCACTACTAGT+AGG | + | chr1_4:45847792-45847811 | Msa0165390:intron | 35.0% | |
| !!! | GAATACGTGTTGCTATTTTG+AGG | + | chr1_4:45847901-45847920 | Msa0165390:intron | 35.0% |
| TTGAGGTTTAATCCACTACA+TGG | + | chr1_4:45847918-45847937 | Msa0165390:intron | 35.0% | |
| !! | GAATTTAAGGGCATTGTGTT+AGG | + | chr1_4:45847674-45847693 | Msa0165390:intron | 35.0% |
| CAGGTATTTCAGAATATCTG+AGG | - | chr1_4:45848039-45848058 | None:intergenic | 35.0% | |
| GTACATATTTCAAGCTCACA+AGG | + | chr1_4:45848154-45848173 | Msa0165390:intron | 35.0% | |
| ATATCAGTAGAGTTGTCAAC+TGG | + | chr1_4:45848187-45848206 | Msa0165390:intron | 35.0% | |
| CATCCTTAATACACTTCACT+TGG | - | chr1_4:45848214-45848233 | None:intergenic | 35.0% | |
| GAAGTGTATTAAGGATGAAG+AGG | + | chr1_4:45848217-45848236 | Msa0165390:intron | 35.0% | |
| TAACTATTATCGTCGGATTC+AGG | + | chr1_4:45848370-45848389 | Msa0165390:intron | 35.0% | |
| TCCAATCTATAAGAACAAGG+GGG | + | chr1_4:45848574-45848593 | Msa0165390:intron | 35.0% | |
| TACAAGATTGCGCGAATTAT+AGG | + | chr1_4:45848600-45848619 | Msa0165390:intron | 35.0% | |
| ACAAGATTGCGCGAATTATA+GGG | + | chr1_4:45848601-45848620 | Msa0165390:intron | 35.0% | |
| TGAGTCATACCATGAAGTTA+TGG | + | chr1_4:45848636-45848655 | Msa0165390:intron | 35.0% | |
| GAGTCATACCATGAAGTTAT+GGG | + | chr1_4:45848637-45848656 | Msa0165390:intron | 35.0% | |
| ATACCATGAAGTTATGGGAA+AGG | + | chr1_4:45848642-45848661 | Msa0165390:intron | 35.0% | |
| TACCATGAAGTTATGGGAAA+GGG | + | chr1_4:45848643-45848662 | Msa0165390:intron | 35.0% | |
| AAGAAAAGAGACTCACGTTA+CGG | + | chr1_4:45848682-45848701 | Msa0165390:intron | 35.0% | |
| !!! | AACCAATTTGGTTTTATGCC+TGG | + | chr1_4:45848707-45848726 | Msa0165390:intron | 35.0% |
| !!! | ACCAATTTGGTTTTATGCCT+GGG | + | chr1_4:45848708-45848727 | Msa0165390:intron | 35.0% |
| !! | ATCCTGGATAGCTCTAATAT+AGG | - | chr1_4:45848897-45848916 | None:intergenic | 35.0% |
| ! | GGAGATTTTCCCATAACAAT+AGG | + | chr1_4:45848965-45848984 | Msa0165390:intron | 35.0% |
| ! | TCTGCAAAAAGCATACATCT+CGG | - | chr1_4:45849073-45849092 | None:intergenic | 35.0% |
| AACTTCAGTAAAAGGAGAAG+TGG | + | chr1_4:45849214-45849233 | Msa0165390:intron | 35.0% | |
| ACTTCAGTAAAAGGAGAAGT+GGG | + | chr1_4:45849215-45849234 | Msa0165390:intron | 35.0% | |
| ATATCATACCCCAAGTTACA+CGG | + | chr1_4:45849266-45849285 | Msa0165390:intron | 35.0% | |
| TATCTAAACCGTGTAACTTG+GGG | - | chr1_4:45849277-45849296 | None:intergenic | 35.0% | |
| GATATCTAAACCGTGTAACT+TGG | - | chr1_4:45849279-45849298 | None:intergenic | 35.0% | |
| GTTACACGGTTTAGATATCT+TGG | + | chr1_4:45849280-45849299 | Msa0165390:intron | 35.0% | |
| !! | TTCTCCGTCATTTTGTACTA+TGG | - | chr1_4:45849308-45849327 | None:intergenic | 35.0% |
| TACATCATCGTATTCAAGCT+GGG | + | chr1_4:45849341-45849360 | Msa0165390:intron | 35.0% | |
| ! | AAAGTACCACTTAAGCTGAA+AGG | + | chr1_4:45849406-45849425 | Msa0165390:intron | 35.0% |
| AACTTTCCTTTCAGCTTAAG+TGG | - | chr1_4:45849415-45849434 | None:intergenic | 35.0% | |
| AGCTGAAAGGAAAGTTCTAT+CGG | + | chr1_4:45849419-45849438 | Msa0165390:intron | 35.0% | |
| AGACTAGACATGATAGGATT+AGG | + | chr1_4:45849554-45849573 | Msa0165390:intron | 35.0% | |
| AGCACCTATAGTAGAAAAGT+TGG | + | chr1_4:45849606-45849625 | Msa0165390:intron | 35.0% | |
| TGGTAGAAAATAGGCTTACA+TGG | + | chr1_4:45849626-45849645 | Msa0165390:intron | 35.0% | |
| GAAAATAGGCTTACATGGTT+TGG | + | chr1_4:45849631-45849650 | Msa0165390:intron | 35.0% | |
| TTGATCTACTCTTCTTACCA+CGG | - | chr1_4:45849683-45849702 | None:intergenic | 35.0% | |
| GGTAAGAAGAGTAGATCAAA+TGG | + | chr1_4:45849684-45849703 | Msa0165390:intron | 35.0% | |
| AAGAAGAGTAGATCAAATGG+AGG | + | chr1_4:45849687-45849706 | Msa0165390:intron | 35.0% | |
| AGATTTAGAGGTCAATGAGT+TGG | + | chr1_4:45849771-45849790 | Msa0165390:intron | 35.0% | |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr1_4:45849783-45849802 | Msa0165390:intron | 35.0% |
| TCGTAATTCTGATCTCTGTT+AGG | + | chr1_4:45849928-45849947 | Msa0165390:intron | 35.0% | |
| ACATCAGAACAAAAATGGAC+TGG | - | chr1_4:45849995-45850014 | None:intergenic | 35.0% | |
| TTTGTTCTGATGTCTATTGC+CGG | + | chr1_4:45850002-45850021 | Msa0165390:intron | 35.0% | |
| ATTCTGATTGGGGTATGATT+TGG | + | chr1_4:45850080-45850099 | Msa0165390:intron | 35.0% | |
| TTCTGATTGGGGTATGATTT+GGG | + | chr1_4:45850081-45850100 | Msa0165390:intron | 35.0% | |
| !!! | ATGCTCAGTTACTTTTTCCA+TGG | + | chr1_4:45850150-45850169 | Msa0165390:intron | 35.0% |
| ! | TGTTTTACTTTGTTCAGGGA+AGG | + | chr1_4:45850232-45850251 | Msa0165390:intron | 35.0% |
| ! | AAGACGCTTCTTTTCCAAAA+CGG | - | chr1_4:45850310-45850329 | None:intergenic | 35.0% |
| CAAGTAAATCGATGACTTTC+TGG | - | chr1_4:45850448-45850467 | None:intergenic | 35.0% | |
| !! | CAGAAAGTCATCGATTTACT+TGG | + | chr1_4:45850446-45850465 | Msa0165390:three_prime_UTR | 35.0% |
| ! | TGAGATCGTTTTCTGCGAAT+TGG | - | chr1_4:45842811-45842830 | None:intergenic | 40.0% |
| TTGAAGAGCGAGTAGTGTAT+CGG | - | chr1_4:45842840-45842859 | None:intergenic | 40.0% | |
| TGTGAAGGATAGAACACAAG+TGG | + | chr1_4:45843025-45843044 | Msa0165390:CDS | 40.0% | |
| AGGATAGAACACAAGTGGAT+AGG | + | chr1_4:45843030-45843049 | Msa0165390:CDS | 40.0% | |
| GGATAGAACACAAGTGGATA+GGG | + | chr1_4:45843031-45843050 | Msa0165390:CDS | 40.0% | |
| ACAAGTGGATAGGGAATTAG+AGG | + | chr1_4:45843040-45843059 | Msa0165390:CDS | 40.0% | |
| TACAGCATGATCATCTTGTC+CGG | - | chr1_4:45843251-45843270 | None:intergenic | 40.0% | |
| TTTCGATGACTACCTGATAC+AGG | + | chr1_4:45843276-45843295 | Msa0165390:CDS | 40.0% | |
| ATGCATGTATGTTGTCAGTC+TGG | + | chr1_4:45843324-45843343 | Msa0165390:intron | 40.0% | |
| CGGTCACAAGAATGTATTGT+TGG | + | chr1_4:45843705-45843724 | Msa0165390:intron | 40.0% | |
| TTGGATGTCTTTGGCGTTTA+TGG | + | chr1_4:45843839-45843858 | Msa0165390:intron | 40.0% | |
| !! | CAGCTTTGAATCTAGGACAT+GGG | - | chr1_4:45844015-45844034 | None:intergenic | 40.0% |
| !! | CAGTATCCAGCTTTGAATCT+AGG | - | chr1_4:45844022-45844041 | None:intergenic | 40.0% |
| CTAGATTCAAAGCTGGATAC+TGG | + | chr1_4:45844020-45844039 | Msa0165390:CDS | 40.0% | |
| GACAGTAAAATGAGCAGAAG+TGG | - | chr1_4:45844107-45844126 | None:intergenic | 40.0% | |
| CTGACACATGGTACTCAAAT+CGG | + | chr1_4:45844198-45844217 | Msa0165390:intron | 40.0% | |
| TGACACATGGTACTCAAATC+GGG | + | chr1_4:45844199-45844218 | Msa0165390:intron | 40.0% | |
| CGATACACGATTCAAAACAG+TGG | - | chr1_4:45844246-45844265 | None:intergenic | 40.0% | |
| GGAAGCCATAAAGAAAGAGA+AGG | + | chr1_4:45844474-45844493 | Msa0165390:intron | 40.0% | |
| TGTGACACATCAGATATTGC+AGG | - | chr1_4:45844574-45844593 | None:intergenic | 40.0% | |
| CAAATTTACACGGTTCCCTT+GGG | - | chr1_4:45844606-45844625 | None:intergenic | 40.0% | |
| CAAGGGAACCGTGTAAATTT+GGG | + | chr1_4:45844605-45844624 | Msa0165390:intron | 40.0% | |
| AAGGGAACCGTGTAAATTTG+GGG | + | chr1_4:45844606-45844625 | Msa0165390:intron | 40.0% | |
| !! | CGTGTAAATTTGGGGTTTTC+TGG | + | chr1_4:45844614-45844633 | Msa0165390:intron | 40.0% |
| !! | GTAAATTTGGGGTTTTCTGG+AGG | + | chr1_4:45844617-45844636 | Msa0165390:intron | 40.0% |
| TATGGATCAGTCCTGAAATC+GGG | - | chr1_4:45844659-45844678 | None:intergenic | 40.0% | |
| ! | TTTCGTTTGTTGCAGAAACC+AGG | - | chr1_4:45844730-45844749 | None:intergenic | 40.0% |
| CGAAAATGTCACAGTATCGT+AGG | + | chr1_4:45844745-45844764 | Msa0165390:intron | 40.0% | |
| CGTAGGATACCAGATTGAAT+CGG | + | chr1_4:45844762-45844781 | Msa0165390:intron | 40.0% | |
| GTAGGATACCAGATTGAATC+GGG | + | chr1_4:45844763-45844782 | Msa0165390:intron | 40.0% | |
| TAGGATACCAGATTGAATCG+GGG | + | chr1_4:45844764-45844783 | Msa0165390:intron | 40.0% | |
| GCCTGGAATACAATGTCATT+TGG | + | chr1_4:45844819-45844838 | Msa0165390:intron | 40.0% | |
| CCCAAATGACATTGTATTCC+AGG | - | chr1_4:45844823-45844842 | None:intergenic | 40.0% | |
| AGTGCTCACTCTTATCACTT+GGG | + | chr1_4:45845102-45845121 | Msa0165390:intron | 40.0% | |
| GGATGCCTGCATTAATTAGA+AGG | - | chr1_4:45845154-45845173 | None:intergenic | 40.0% | |
| AGGCATCCTTGTAAGTGAAA+TGG | + | chr1_4:45845166-45845185 | Msa0165390:intron | 40.0% | |
| AAACTGGCGTGTTAGAATCA+GGG | - | chr1_4:45845490-45845509 | None:intergenic | 40.0% | |
| TATGGATGCAACTAAACAGG+AGG | - | chr1_4:45845882-45845901 | None:intergenic | 40.0% | |
| GTTTGGATCAATAAGTTGCC+TGG | - | chr1_4:45845982-45846001 | None:intergenic | 40.0% | |
| !! | ACTTCTTAAGGGTCTTGTTC+AGG | + | chr1_4:45846034-45846053 | Msa0165390:CDS | 40.0% |
| AGCATCCAGACATAAAGACA+TGG | - | chr1_4:45846079-45846098 | None:intergenic | 40.0% | |
| ! | ACTTTGGAGATACACTTGCT+TGG | + | chr1_4:45846438-45846457 | Msa0165390:intron | 40.0% |
| TTTAGGCACACACACACAAA+AGG | + | chr1_4:45846483-45846502 | Msa0165390:intron | 40.0% | |
| TTAGGCACACACACACAAAA+GGG | + | chr1_4:45846484-45846503 | Msa0165390:intron | 40.0% | |
| ! | GTTGTGCATTTTGCTTCAGA+GGG | - | chr1_4:45846997-45847016 | None:intergenic | 40.0% |
| ! | AGTTGTGCATTTTGCTTCAG+AGG | - | chr1_4:45846998-45847017 | None:intergenic | 40.0% |
| GAGCAATGCTCTTGTATTTG+AGG | - | chr1_4:45847034-45847053 | None:intergenic | 40.0% | |
| !! | TACAAGAGCATTGCTCCATA+TGG | + | chr1_4:45847038-45847057 | Msa0165390:intron | 40.0% |
| TTGGAGGTTGGATATCAGAT+GGG | - | chr1_4:45847066-45847085 | None:intergenic | 40.0% | |
| ATTGGAGGTTGGATATCAGA+TGG | - | chr1_4:45847067-45847086 | None:intergenic | 40.0% | |
| !! | GATAATTGATGGCGGAATTC+TGG | - | chr1_4:45847118-45847137 | None:intergenic | 40.0% |
| ATCTGTGGGATAATTGATGG+CGG | - | chr1_4:45847126-45847145 | None:intergenic | 40.0% | |
| GAAACGAACCTGAAATCTGT+GGG | - | chr1_4:45847140-45847159 | None:intergenic | 40.0% | |
| TGAAACGAACCTGAAATCTG+TGG | - | chr1_4:45847141-45847160 | None:intergenic | 40.0% | |
| AGGTATGAAGCGAATTCTGA+GGG | - | chr1_4:45847269-45847288 | None:intergenic | 40.0% | |
| AAGGTATGAAGCGAATTCTG+AGG | - | chr1_4:45847270-45847289 | None:intergenic | 40.0% | |
| ! | GCTTCATACCTTCTAGAAAG+TGG | + | chr1_4:45847278-45847297 | Msa0165390:intron | 40.0% |
| TCAATTACCTAAGCCATCTC+AGG | - | chr1_4:45847306-45847325 | None:intergenic | 40.0% | |
| TGGGTAAATGACATCGTTTC+TGG | + | chr1_4:45847333-45847352 | Msa0165390:intron | 40.0% | |
| CTGGTCAAATTGATCAATCC+TGG | + | chr1_4:45847352-45847371 | Msa0165390:intron | 40.0% | |
| ATCTCTCGAGAAATTTGACC+AGG | - | chr1_4:45847373-45847392 | None:intergenic | 40.0% | |
| GAGATTGAAAGAGGTTGTGA+TGG | + | chr1_4:45847388-45847407 | Msa0165390:intron | 40.0% | |
| ATTGAAAGAGGTTGTGATGG+TGG | + | chr1_4:45847391-45847410 | Msa0165390:intron | 40.0% | |
| TTGAAAGAGGTTGTGATGGT+GGG | + | chr1_4:45847392-45847411 | Msa0165390:intron | 40.0% | |
| TACAATGCACCATCTACTAG+TGG | - | chr1_4:45847543-45847562 | None:intergenic | 40.0% | |
| TTCGATGTTAATCCGCTACA+TGG | + | chr1_4:45847652-45847671 | Msa0165390:intron | 40.0% | |
| TGCCCTTAAATTCCATGTAG+CGG | - | chr1_4:45847667-45847686 | None:intergenic | 40.0% | |
| !! | GGAATTTAAGGGCATTGTGT+TGG | + | chr1_4:45847673-45847692 | Msa0165390:intron | 40.0% |
| ATCTATGCACTACTAGTAGG+TGG | + | chr1_4:45847795-45847814 | Msa0165390:intron | 40.0% | |
| TGCCCTTAAATTCCATGTAG+TGG | - | chr1_4:45847667-45847686 | None:intergenic | 40.0% | |
| !! | TTAAGGGCATTGTGTTAGGA+AGG | + | chr1_4:45847944-45847963 | Msa0165390:intron | 40.0% |
| !! | TTCTGAAATACCTGAAGAGG+TGG | + | chr1_4:45848045-45848064 | Msa0165390:intron | 40.0% |
| ! | TCTGAAATACCTGAAGAGGT+GGG | + | chr1_4:45848046-45848065 | Msa0165390:intron | 40.0% |
| GAGATGAGCGTTCAATTTAG+AGG | - | chr1_4:45848075-45848094 | None:intergenic | 40.0% | |
| GGACCAAGTGAAGTGTATTA+AGG | + | chr1_4:45848208-45848227 | Msa0165390:intron | 40.0% | |
| !! | GGATGAAGAGGGTATAGTTT+TGG | + | chr1_4:45848229-45848248 | Msa0165390:intron | 40.0% |
| GGTGCAAGAGAGAGATATTA+AGG | + | chr1_4:45848250-45848269 | Msa0165390:intron | 40.0% | |
| AGATCTTACCAGACTCTAAC+AGG | + | chr1_4:45848318-45848337 | Msa0165390:intron | 40.0% | |
| ATGTCTAACCTGTTAGAGTC+TGG | - | chr1_4:45848329-45848348 | None:intergenic | 40.0% | |
| TAACAGGTTAGACATCAGAG+AGG | + | chr1_4:45848334-45848353 | Msa0165390:intron | 40.0% | |
| !! | AGGTGAAAGAAGCGTTGAAA+AGG | + | chr1_4:45848399-45848418 | Msa0165390:intron | 40.0% |
| GCGTTGAAAAGGATGAGTAA+TGG | + | chr1_4:45848410-45848429 | Msa0165390:intron | 40.0% | |
| GAAAAGGATGAGTAATGGCA+AGG | + | chr1_4:45848415-45848434 | Msa0165390:intron | 40.0% | |
| ACTTCGATAGGTATGTTGTC+CGG | - | chr1_4:45848449-45848468 | None:intergenic | 40.0% | |
| ACAACATACCTATCGAAGTG+TGG | + | chr1_4:45848450-45848469 | Msa0165390:intron | 40.0% | |
| ! | AGACTTTTCCACACTTCGAT+AGG | - | chr1_4:45848461-45848480 | None:intergenic | 40.0% |
| ATCGAAGTGTGGAAAAGTCT+TGG | + | chr1_4:45848461-45848480 | Msa0165390:intron | 40.0% | |
| TATGAGGACGAAGAAAATGC+CGG | + | chr1_4:45848526-45848545 | Msa0165390:intron | 40.0% | |
| TCCCCCTTGTTCTTATAGAT+TGG | - | chr1_4:45848578-45848597 | None:intergenic | 40.0% | |
| CAAGATTGCGCGAATTATAG+GGG | + | chr1_4:45848602-45848621 | Msa0165390:intron | 40.0% | |
| TACCCTTTCCCATAACTTCA+TGG | - | chr1_4:45848648-45848667 | None:intergenic | 40.0% | |
| CACGTTACGGATAACCAATT+TGG | + | chr1_4:45848695-45848714 | Msa0165390:intron | 40.0% | |
| TCCCAGGCATAAAACCAAAT+TGG | - | chr1_4:45848712-45848731 | None:intergenic | 40.0% | |
| !!! | AATTTGGTTTTATGCCTGGG+AGG | + | chr1_4:45848711-45848730 | Msa0165390:intron | 40.0% |
| ! | GAGTACCTAGAGAGATTTTG+TGG | + | chr1_4:45848840-45848859 | Msa0165390:intron | 40.0% |
| GCTTTCCACAAAATCTCTCT+AGG | - | chr1_4:45848848-45848867 | None:intergenic | 40.0% | |
| TGCCTATATTAGAGCTATCC+AGG | + | chr1_4:45848892-45848911 | Msa0165390:intron | 40.0% | |
| AGCTATCCAGGATATGTATG+AGG | + | chr1_4:45848904-45848923 | Msa0165390:intron | 40.0% | |
| GCTATCCAGGATATGTATGA+GGG | + | chr1_4:45848905-45848924 | Msa0165390:intron | 40.0% | |
| CTATCCAGGATATGTATGAG+GGG | + | chr1_4:45848906-45848925 | Msa0165390:intron | 40.0% | |
| TATCCAGGATATGTATGAGG+GGG | + | chr1_4:45848907-45848926 | Msa0165390:intron | 40.0% | |
| TGGTGCAGTCCTATTGTTAT+GGG | - | chr1_4:45848977-45848996 | None:intergenic | 40.0% | |
| TTGGTGCAGTCCTATTGTTA+TGG | - | chr1_4:45848978-45848997 | None:intergenic | 40.0% | |
| ATAACAATAGGACTGCACCA+AGG | + | chr1_4:45848977-45848996 | Msa0165390:intron | 40.0% | |
| TAACAATAGGACTGCACCAA+GGG | + | chr1_4:45848978-45848997 | Msa0165390:intron | 40.0% | |
| !! | ATTCCGTCTTGTTTCTACTC+AGG | - | chr1_4:45849183-45849202 | None:intergenic | 40.0% |
| TCTACCTTAGAGGTGAAAGT+TGG | + | chr1_4:45849238-45849257 | Msa0165390:intron | 40.0% | |
| ATCTCCAACTTTCACCTCTA+AGG | - | chr1_4:45849245-45849264 | None:intergenic | 40.0% | |
| GGGTCCATAGTACAAAATGA+CGG | + | chr1_4:45849301-45849320 | Msa0165390:intron | 40.0% | |
| GTACATCATCGTATTCAAGC+TGG | + | chr1_4:45849340-45849359 | Msa0165390:intron | 40.0% | |
| GTGGTAAGACTAGACATGAT+AGG | + | chr1_4:45849548-45849567 | Msa0165390:intron | 40.0% | |
| TGACATCATTAGAGAGAGAG+TGG | + | chr1_4:45849579-45849598 | Msa0165390:intron | 40.0% | |
| GACATCATTAGAGAGAGAGT+GGG | + | chr1_4:45849580-45849599 | Msa0165390:intron | 40.0% | |
| ACATCATTAGAGAGAGAGTG+GGG | + | chr1_4:45849581-45849600 | Msa0165390:intron | 40.0% | |
| AGTCAGGTTAAAAGAGGTAG+AGG | + | chr1_4:45849712-45849731 | Msa0165390:intron | 40.0% | |
| TATCTATCCTATGTAGTGGC+TGG | + | chr1_4:45850028-45850047 | Msa0165390:intron | 40.0% | |
| TTACTTTGTTCAGGGAAGGA+AGG | + | chr1_4:45850236-45850255 | Msa0165390:intron | 40.0% | |
| ATATTGACGACGACTGAGAA+GGG | - | chr1_4:45850271-45850290 | None:intergenic | 40.0% | |
| TATATTGACGACGACTGAGA+AGG | - | chr1_4:45850272-45850291 | None:intergenic | 40.0% | |
| TCTCAGTCGTCGTCAATATA+AGG | + | chr1_4:45850272-45850291 | Msa0165390:CDS | 40.0% | |
| ! | CTTCGTGATTTGATTGGTTC+TGG | + | chr1_4:45850360-45850379 | Msa0165390:CDS | 40.0% |
| GCAGCAGACAAATCATTTCA+TGG | - | chr1_4:45850474-45850493 | None:intergenic | 40.0% | |
| ACTTCAGAATTCACGACGCA+TGG | + | chr1_4:45842635-45842654 | Msa0165390:exon | 45.0% | |
| ! | GAGTGATGATGAGGTGTTTC+CGG | - | chr1_4:45842721-45842740 | None:intergenic | 45.0% |
| GGAAACACCTCATCATCACT+CGG | + | chr1_4:45842720-45842739 | Msa0165390:CDS | 45.0% | |
| TATTTGTGCAGTTGCTACGG+AGG | + | chr1_4:45843194-45843213 | Msa0165390:intron | 45.0% | |
| ATTTGTGCAGTTGCTACGGA+GGG | + | chr1_4:45843195-45843214 | Msa0165390:intron | 45.0% | |
| ! | TACGGAGGGATAAAGTGCTT+CGG | + | chr1_4:45843209-45843228 | Msa0165390:CDS | 45.0% |
| GATGACTACCTGATACAGGT+TGG | + | chr1_4:45843280-45843299 | Msa0165390:intron | 45.0% | |
| !! | CCAGCTTTGAATCTAGGACA+TGG | - | chr1_4:45844016-45844035 | None:intergenic | 45.0% |
| CCATGTCCTAGATTCAAAGC+TGG | + | chr1_4:45844013-45844032 | Msa0165390:CDS | 45.0% | |
| ! | AAGAGAAGGTCAGTGGCTTT+TGG | + | chr1_4:45844488-45844507 | Msa0165390:intron | 45.0% |
| ! | AGAGAAGGTCAGTGGCTTTT+GGG | + | chr1_4:45844489-45844508 | Msa0165390:intron | 45.0% |
| CCAAATTTACACGGTTCCCT+TGG | - | chr1_4:45844607-45844626 | None:intergenic | 45.0% | |
| CCAAGGGAACCGTGTAAATT+TGG | + | chr1_4:45844604-45844623 | Msa0165390:intron | 45.0% | |
| ATCAGTCCTGAAATCGGGTT+GGG | - | chr1_4:45844654-45844673 | None:intergenic | 45.0% | |
| TTTGTTGCAGAAACCAGGTC+GGG | - | chr1_4:45844725-45844744 | None:intergenic | 45.0% | |
| ! | GTTTGTTGCAGAAACCAGGT+CGG | - | chr1_4:45844726-45844745 | None:intergenic | 45.0% |
| CAGATTGAATCGGGGTACAT+GGG | + | chr1_4:45844772-45844791 | Msa0165390:intron | 45.0% | |
| TGGGATACTCCCGTGATATA+TGG | + | chr1_4:45844791-45844810 | Msa0165390:intron | 45.0% | |
| GGGATACTCCCGTGATATAT+GGG | + | chr1_4:45844792-45844811 | Msa0165390:intron | 45.0% | |
| AGGCGTATCCCATATATCAC+GGG | - | chr1_4:45844803-45844822 | None:intergenic | 45.0% | |
| CAGGCGTATCCCATATATCA+CGG | - | chr1_4:45844804-45844823 | None:intergenic | 45.0% | |
| TAGGATACGAAAACAGCCGT+GGG | - | chr1_4:45844868-45844887 | None:intergenic | 45.0% | |
| ATAGGATACGAAAACAGCCG+TGG | - | chr1_4:45844869-45844888 | None:intergenic | 45.0% | |
| !! | CGGCTGTTTTCGTATCCTAT+CGG | + | chr1_4:45844869-45844888 | Msa0165390:intron | 45.0% |
| !! | GGCTGTTTTCGTATCCTATC+GGG | + | chr1_4:45844870-45844889 | Msa0165390:intron | 45.0% |
| TCCTATCGGGATATGTATCG+TGG | + | chr1_4:45844883-45844902 | Msa0165390:intron | 45.0% | |
| CCTATCGGGATATGTATCGT+GGG | + | chr1_4:45844884-45844903 | Msa0165390:intron | 45.0% | |
| CAGTGCTCACTCTTATCACT+TGG | + | chr1_4:45845101-45845120 | Msa0165390:intron | 45.0% | |
| GTGCTCACTCTTATCACTTG+GGG | + | chr1_4:45845103-45845122 | Msa0165390:intron | 45.0% | |
| TGCTCACTCTTATCACTTGG+GGG | + | chr1_4:45845104-45845123 | Msa0165390:CDS | 45.0% | |
| ACTCTTATCACTTGGGGGAA+AGG | + | chr1_4:45845109-45845128 | Msa0165390:CDS | 45.0% | |
| ACTGTCACAACTTTGCTTGG+AGG | + | chr1_4:45845238-45845257 | Msa0165390:intron | 45.0% | |
| AACTGGCGTGTTAGAATCAG+GGG | - | chr1_4:45845489-45845508 | None:intergenic | 45.0% | |
| GAAACTGGCGTGTTAGAATC+AGG | - | chr1_4:45845491-45845510 | None:intergenic | 45.0% | |
| ! | TGGTGCATACTTTTCAGACC+AGG | + | chr1_4:45845961-45845980 | Msa0165390:intron | 45.0% |
| GATATCAGATGGGCACCATA+TGG | - | chr1_4:45847056-45847075 | None:intergenic | 45.0% | |
| ATATCCAACCTCCAATCCCA+TGG | + | chr1_4:45847071-45847090 | Msa0165390:intron | 45.0% | |
| TATCCAACCTCCAATCCCAT+GGG | + | chr1_4:45847072-45847091 | Msa0165390:intron | 45.0% | |
| AATTCTGGCACCAGATCTAG+TGG | - | chr1_4:45847103-45847122 | None:intergenic | 45.0% | |
| AAAGAGGTTGCGACAATGGA+GGG | + | chr1_4:45847417-45847436 | Msa0165390:intron | 45.0% | |
| ATCTGTGCACCACTAGTAGA+TGG | + | chr1_4:45847531-45847550 | Msa0165390:intron | 45.0% | |
| !! | TTAAGGGCATTGTGTTGGGA+TGG | + | chr1_4:45847678-45847697 | Msa0165390:intron | 45.0% |
| !!! | GAGGAAGCATTTTGGCATTC+TGG | + | chr1_4:45847769-45847788 | Msa0165390:intron | 45.0% |
| GAACGCTCATCTCACTTGTT+TGG | + | chr1_4:45848082-45848101 | Msa0165390:intron | 45.0% | |
| ATGAGTAATGGCAAGGCAGT+TGG | + | chr1_4:45848422-45848441 | Msa0165390:intron | 45.0% | |
| TGAGTAATGGCAAGGCAGTT+GGG | + | chr1_4:45848423-45848442 | Msa0165390:intron | 45.0% | |
| TGGAAAAGTCTTGGCGATAG+AGG | + | chr1_4:45848470-45848489 | Msa0165390:intron | 45.0% | |
| AGTCTTGGCGATAGAGGAAT+TGG | + | chr1_4:45848476-45848495 | Msa0165390:intron | 45.0% | |
| GTCTTGGCGATAGAGGAATT+GGG | + | chr1_4:45848477-45848496 | Msa0165390:intron | 45.0% | |
| ! | AGAGATTTTGTGGAAAGCCC+TGG | + | chr1_4:45848850-45848869 | Msa0165390:intron | 45.0% |
| !! | TACATCTCGGTGCTAACTCT+TGG | - | chr1_4:45849060-45849079 | None:intergenic | 45.0% |
| ! | GCAGATGATGTAGTCTTGCT+TGG | + | chr1_4:45849088-45849107 | Msa0165390:intron | 45.0% |
| ATCATCGTATTCAAGCTGGG+TGG | + | chr1_4:45849344-45849363 | Msa0165390:intron | 45.0% | |
| TTCAAGCTGGGTGGTTGAAA+TGG | + | chr1_4:45849353-45849372 | Msa0165390:intron | 45.0% | |
| TTGAAATGGAGAAGAGCCTC+AGG | + | chr1_4:45849367-45849386 | Msa0165390:intron | 45.0% | |
| CTTATCGCACAAAACACCTG+AGG | - | chr1_4:45849386-45849405 | None:intergenic | 45.0% | |
| ACCGGCAATGTTGTATGGTA+CGG | + | chr1_4:45849453-45849472 | Msa0165390:intron | 45.0% | |
| TCCGTACCATACAACATTGC+CGG | - | chr1_4:45849457-45849476 | None:intergenic | 45.0% | |
| TGTTGTATGGTACGGAGTGT+TGG | + | chr1_4:45849461-45849480 | Msa0165390:intron | 45.0% | |
| ! | GTTGTATGGTACGGAGTGTT+GGG | + | chr1_4:45849462-45849481 | Msa0165390:intron | 45.0% |
| CGCTTACTTTACTCTCGTGT+TGG | - | chr1_4:45849498-45849517 | None:intergenic | 45.0% | |
| CGAGAGTAAAGTAAGCGTAG+CGG | + | chr1_4:45849501-45849520 | Msa0165390:intron | 45.0% | |
| CATCATTAGAGAGAGAGTGG+GGG | + | chr1_4:45849582-45849601 | Msa0165390:intron | 45.0% | |
| AGATCAAATGGAGGAGAGTC+AGG | + | chr1_4:45849696-45849715 | Msa0165390:intron | 45.0% | |
| GAGGAGAGTCAGGTTAAAAG+AGG | + | chr1_4:45849706-45849725 | Msa0165390:intron | 45.0% | |
| AACGCCTTATCCCACTAAGT+GGG | - | chr1_4:45849853-45849872 | None:intergenic | 45.0% | |
| CACCACTAGTACAACAGATG+TGG | + | chr1_4:45849969-45849988 | Msa0165390:intron | 45.0% | |
| TGTTTATACCAGTCGGAGTC+TGG | - | chr1_4:45850401-45850420 | None:intergenic | 45.0% | |
| !!! | CAATTTTTTTTATTTATAAA+TGG | + | chr1_4:45850553-45850572 | Msa0165390:three_prime_UTR | 5.0% |
| ! | ATTTTCAGTTCGCCGGCGTT+TGG | - | chr1_4:45842691-45842710 | None:intergenic | 50.0% |
| ! | CGTCGGAATTTTCAGTTCGC+CGG | - | chr1_4:45842698-45842717 | None:intergenic | 50.0% |
| CGAACTGAAAATTCCGACGC+CGG | + | chr1_4:45842699-45842718 | Msa0165390:CDS | 50.0% | |
| ! | GTGTGTACCGAGTGATGATG+AGG | - | chr1_4:45842730-45842749 | None:intergenic | 50.0% |
| GTTGTTCATCCAAGCAGAGC+CGG | + | chr1_4:45843555-45843574 | Msa0165390:intron | 50.0% | |
| CTAGGAGAGGTTGACAACGT+GGG | - | chr1_4:45843634-45843653 | None:intergenic | 50.0% | |
| ACTAGGAGAGGTTGACAACG+TGG | - | chr1_4:45843635-45843654 | None:intergenic | 50.0% | |
| ! | GGATACTGGCATCGAACATG+AGG | + | chr1_4:45844034-45844053 | Msa0165390:CDS | 50.0% |
| ATCTGGCTAATGTCCGGCTT+TGG | + | chr1_4:45844148-45844167 | Msa0165390:intron | 50.0% | |
| TCTGGCTAATGTCCGGCTTT+GGG | + | chr1_4:45844149-45844168 | Msa0165390:intron | 50.0% | |
| CATGAGCATTCTCCCAAAGC+CGG | - | chr1_4:45844164-45844183 | None:intergenic | 50.0% | |
| TGTCACATAAACCCGACCCA+AGG | + | chr1_4:45844587-45844606 | Msa0165390:intron | 50.0% | |
| GTCACATAAACCCGACCCAA+GGG | + | chr1_4:45844588-45844607 | Msa0165390:intron | 50.0% | |
| TTTACACGGTTCCCTTGGGT+CGG | - | chr1_4:45844602-45844621 | None:intergenic | 50.0% | |
| GATCAGTCCTGAAATCGGGT+TGG | - | chr1_4:45844655-45844674 | None:intergenic | 50.0% | |
| CCATGTACCCCGATTCAATC+TGG | - | chr1_4:45844774-45844793 | None:intergenic | 50.0% | |
| CCAGATTGAATCGGGGTACA+TGG | + | chr1_4:45844771-45844790 | Msa0165390:intron | 50.0% | |
| CGTGATATATGGGATACGCC+TGG | + | chr1_4:45844802-45844821 | Msa0165390:intron | 50.0% | |
| ACCCTGATACGTATTGCCCA+CGG | + | chr1_4:45844849-45844868 | Msa0165390:intron | 50.0% | |
| CCCACGATACATATCCCGAT+AGG | - | chr1_4:45844887-45844906 | None:intergenic | 50.0% | |
| ATCACTTGGGGGAAAGGTGA+AGG | + | chr1_4:45845115-45845134 | Msa0165390:CDS | 50.0% | |
| GAGTTGGGGTTTGTGGAAGT+AGG | - | chr1_4:45846907-45846926 | None:intergenic | 50.0% | |
| ! | GCATTTTGCTTCAGAGGGTG+CGG | - | chr1_4:45846992-45847011 | None:intergenic | 50.0% |
| ! | CTCAGGAGCCACTTTCTAGA+AGG | - | chr1_4:45847289-45847308 | None:intergenic | 50.0% |
| CTAGAAAGTGGCTCCTGAGA+TGG | + | chr1_4:45847290-45847309 | Msa0165390:intron | 50.0% | |
| !! | GTTGTGATGGTGGGAGAAAG+AGG | + | chr1_4:45847401-45847420 | Msa0165390:intron | 50.0% |
| GGAGAAAGAGGTTGCGACAA+TGG | + | chr1_4:45847413-45847432 | Msa0165390:intron | 50.0% | |
| GAAAGAGGTTGCGACAATGG+AGG | + | chr1_4:45847416-45847435 | Msa0165390:intron | 50.0% | |
| GAGGGTGGTAGCAAAGAGTT+GGG | + | chr1_4:45847435-45847454 | Msa0165390:intron | 50.0% | |
| AAAGAGTTGGGAGAGACCAG+AGG | + | chr1_4:45847447-45847466 | Msa0165390:intron | 50.0% | |
| AAGAGTTGGGAGAGACCAGA+GGG | + | chr1_4:45847448-45847467 | Msa0165390:intron | 50.0% | |
| GAAGGTAAAGGGAGGGTAGA+AGG | + | chr1_4:45847483-45847502 | Msa0165390:intron | 50.0% | |
| TGGTGCACAGATACACCAGA+GGG | - | chr1_4:45847523-45847542 | None:intergenic | 50.0% | |
| CATTGTGTTGGGATGGAGGA+GGG | + | chr1_4:45847685-45847704 | Msa0165390:intron | 50.0% | |
| AAAGAGTTGGGAGAGACCAG+AGG | + | chr1_4:45847447-45847466 | Msa0165390:intron | 50.0% | |
| AAGAGTTGGGAGAGACCAGA+GGG | + | chr1_4:45847448-45847467 | Msa0165390:intron | 50.0% | |
| !!! | GGTGGAAGGAGGAAGCATTT+TGG | + | chr1_4:45847761-45847780 | Msa0165390:intron | 50.0% |
| !! | AGGGCATTGTGTTAGGAAGG+AGG | + | chr1_4:45847947-45847966 | Msa0165390:intron | 50.0% |
| GCATTGTGTTAGGAAGGAGG+AGG | + | chr1_4:45847950-45847969 | Msa0165390:intron | 50.0% | |
| CAGGTTAGACATCAGAGAGG+AGG | + | chr1_4:45848337-45848356 | Msa0165390:intron | 50.0% | |
| TTGGCGATAGAGGAATTGGG+TGG | + | chr1_4:45848480-45848499 | Msa0165390:intron | 50.0% | |
| CTACTTACTTCGACGCGTGA+TGG | + | chr1_4:45848751-45848770 | Msa0165390:intron | 50.0% | |
| TGGAAAGCCCTGGAGAAGAA+AGG | + | chr1_4:45848860-45848879 | Msa0165390:intron | 50.0% | |
| GGAAAGCCCTGGAGAAGAAA+GGG | + | chr1_4:45848861-45848880 | Msa0165390:intron | 50.0% | |
| GAAAGCCCTGGAGAAGAAAG+GGG | + | chr1_4:45848862-45848881 | Msa0165390:intron | 50.0% | |
| AAGCCCCCTCATACATATCC+TGG | - | chr1_4:45848913-45848932 | None:intergenic | 50.0% | |
| AAGGACTTAGGGTTGACCCT+TGG | - | chr1_4:45848997-45849016 | None:intergenic | 50.0% | |
| ! | TAGTCTTGCTTGGTGAGTCG+AGG | + | chr1_4:45849098-45849117 | Msa0165390:intron | 50.0% |
| ! | AGTCTTGCTTGGTGAGTCGA+GGG | + | chr1_4:45849099-45849118 | Msa0165390:intron | 50.0% |
| GAGTCGAGGGAGGAGTTAAA+CGG | + | chr1_4:45849112-45849131 | Msa0165390:intron | 50.0% | |
| AGTCGAGGGAGGAGTTAAAC+GGG | + | chr1_4:45849113-45849132 | Msa0165390:intron | 50.0% | |
| TAAACGGGAGGCTAGAGACT+TGG | + | chr1_4:45849128-45849147 | Msa0165390:intron | 50.0% | |
| ! | AGGCAAGCCTTAGAAGCGTA+CGG | + | chr1_4:45849151-45849170 | Msa0165390:intron | 50.0% |
| !! | CCGTCTTGTTTCTACTCAGG+CGG | - | chr1_4:45849180-45849199 | None:intergenic | 50.0% |
| CCGCCTGAGTAGAAACAAGA+CGG | + | chr1_4:45849177-45849196 | Msa0165390:intron | 50.0% | |
| GAGAAGTGGGTCTACCTTAG+AGG | + | chr1_4:45849228-45849247 | Msa0165390:intron | 50.0% | |
| GTCAGACCGGCAATGTTGTA+TGG | + | chr1_4:45849448-45849467 | Msa0165390:intron | 50.0% | |
| ! | AAGTAAGCGTAGCGGAGATG+AGG | + | chr1_4:45849509-45849528 | Msa0165390:intron | 50.0% |
| AGGATGTTGCGTTGGATGAG+TGG | + | chr1_4:45849529-45849548 | Msa0165390:intron | 50.0% | |
| TCTTCTTACCACGGCGTCTA+CGG | - | chr1_4:45849674-45849693 | None:intergenic | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr1_4:45849848-45849867 | None:intergenic | 50.0% | |
| ACGCCTTATCCCACTAAGTG+GGG | - | chr1_4:45849852-45849871 | None:intergenic | 50.0% | |
| CAACGCCTTATCCCACTAAG+TGG | - | chr1_4:45849854-45849873 | None:intergenic | 50.0% | |
| GGCCACATCTGTTGTACTAG+TGG | - | chr1_4:45849974-45849993 | None:intergenic | 50.0% | |
| CTATCCTATGTAGTGGCTGG+TGG | + | chr1_4:45850031-45850050 | Msa0165390:intron | 50.0% | |
| CTATCCACCAGCCACTACAT+AGG | - | chr1_4:45850038-45850057 | None:intergenic | 50.0% | |
| ! | GGAGATGATGTTGGCCGTTT+TGG | + | chr1_4:45850293-45850312 | Msa0165390:CDS | 50.0% |
| !! | CATCCAAAGGCACCAAACGC+CGG | + | chr1_4:45842676-45842695 | Msa0165390:CDS | 55.0% |
| ! | TGATGAGGTGTTTCCGGCGT+CGG | - | chr1_4:45842715-45842734 | None:intergenic | 55.0% |
| CCATTTACTCCGGCTCTGCT+TGG | - | chr1_4:45843567-45843586 | None:intergenic | 55.0% | |
| CCAAGCAGAGCCGGAGTAAA+TGG | + | chr1_4:45843564-45843583 | Msa0165390:intron | 55.0% | |
| !! | GAAGGCACTGGAGTAGCACT+CGG | - | chr1_4:45843770-45843789 | None:intergenic | 55.0% |
| TTACACGGTTCCCTTGGGTC+GGG | - | chr1_4:45844601-45844620 | None:intergenic | 55.0% | |
| GCAAAGCCCAACCCGATTTC+AGG | + | chr1_4:45844645-45844664 | Msa0165390:intron | 55.0% | |
| GCCGTGGGCAATACGTATCA+GGG | - | chr1_4:45844853-45844872 | None:intergenic | 55.0% | |
| AGCCGTGGGCAATACGTATC+AGG | - | chr1_4:45844854-45844873 | None:intergenic | 55.0% | |
| GAGAGAGGAGTTGGGGTTTG+TGG | - | chr1_4:45846914-45846933 | None:intergenic | 55.0% | |
| TGAAGGGGGTGAAAGCTGGA+GGG | - | chr1_4:45846938-45846957 | None:intergenic | 55.0% | |
| ATGAAGGGGGTGAAAGCTGG+AGG | - | chr1_4:45846939-45846958 | None:intergenic | 55.0% | |
| GTGATGAAGGGGGTGAAAGC+TGG | - | chr1_4:45846942-45846961 | None:intergenic | 55.0% | |
| !! | GATCTAGTGGTGCCACCCAT+GGG | - | chr1_4:45847090-45847109 | None:intergenic | 55.0% |
| !! | AGATCTAGTGGTGCCACCCA+TGG | - | chr1_4:45847091-45847110 | None:intergenic | 55.0% |
| ATGGGTGGCACCACTAGATC+TGG | + | chr1_4:45847090-45847109 | Msa0165390:intron | 55.0% | |
| AGTGGCTCCTGAGATGGCTT+AGG | + | chr1_4:45847296-45847315 | Msa0165390:intron | 55.0% | |
| GGAGGGTGGTAGCAAAGAGT+TGG | + | chr1_4:45847434-45847453 | Msa0165390:intron | 55.0% | |
| GAGCTGGGAAGGTAAAGGGA+GGG | + | chr1_4:45847476-45847495 | Msa0165390:intron | 55.0% | |
| GGTAAAGGGAGGGTAGAAGG+AGG | + | chr1_4:45847486-45847505 | Msa0165390:intron | 55.0% | |
| !! | GAGGAAGCATTTCACCCCTC+TGG | + | chr1_4:45847505-45847524 | Msa0165390:intron | 55.0% |
| GGTGCACAGATACACCAGAG+GGG | - | chr1_4:45847522-45847541 | None:intergenic | 55.0% | |
| GTGGTGCACAGATACACCAG+AGG | - | chr1_4:45847524-45847543 | None:intergenic | 55.0% | |
| !! | AGGGCATTGTGTTGGGATGG+AGG | + | chr1_4:45847681-45847700 | Msa0165390:intron | 55.0% |
| GCATTGTGTTGGGATGGAGG+AGG | + | chr1_4:45847684-45847703 | Msa0165390:intron | 55.0% | |
| GAGGGTGGCAGCAAAGAGTT+GGG | + | chr1_4:45847703-45847722 | Msa0165390:intron | 55.0% | |
| GTGAGGGAGCTGGTAAGGTT+GGG | + | chr1_4:45847738-45847757 | Msa0165390:intron | 55.0% | |
| TGAGGGAGCTGGTAAGGTTG+GGG | + | chr1_4:45847739-45847758 | Msa0165390:intron | 55.0% | |
| TAGGAAGGAGGAGGTGAGTG+AGG | + | chr1_4:45847959-45847978 | Msa0165390:intron | 55.0% | |
| AAGGAGGAGGTGAGTGAGGT+GGG | + | chr1_4:45847963-45847982 | Msa0165390:intron | 55.0% | |
| TAGAGGCTACCCACCTCTTC+AGG | - | chr1_4:45848058-45848077 | None:intergenic | 55.0% | |
| TAATGGCAAGGCAGTTGGGC+CGG | + | chr1_4:45848427-45848446 | Msa0165390:intron | 55.0% | |
| CGAAGAAAATGCCGGACGAG+TGG | + | chr1_4:45848534-45848553 | Msa0165390:intron | 55.0% | |
| GTGCTTCTTCTCCACTCGTC+CGG | - | chr1_4:45848548-45848567 | None:intergenic | 55.0% | |
| TATGCCTGGGAGGTCGACTA+TGG | + | chr1_4:45848721-45848740 | Msa0165390:intron | 55.0% | |
| ! | GACGCGTGATGGAGCGATAT+CGG | + | chr1_4:45848762-45848781 | Msa0165390:intron | 55.0% |
| ! | CGTGATGGAGCGATATCGGA+CGG | + | chr1_4:45848766-45848785 | Msa0165390:intron | 55.0% |
| CCTCACCCCTTTCTTCTCCA+GGG | - | chr1_4:45848870-45848889 | None:intergenic | 55.0% | |
| TCCTCACCCCTTTCTTCTCC+AGG | - | chr1_4:45848871-45848890 | None:intergenic | 55.0% | |
| TTCGACTAGTGTGAGGACGC+AGG | + | chr1_4:45848931-45848950 | Msa0165390:intron | 55.0% | |
| ACTAGTGTGAGGACGCAGGA+TGG | + | chr1_4:45848935-45848954 | Msa0165390:intron | 55.0% | |
| CTAGTGTGAGGACGCAGGAT+GGG | + | chr1_4:45848936-45848955 | Msa0165390:intron | 55.0% | |
| TAGTGTGAGGACGCAGGATG+GGG | + | chr1_4:45848937-45848956 | Msa0165390:intron | 55.0% | |
| GCGGAAACCGTACGCTTCTA+AGG | - | chr1_4:45849161-45849180 | None:intergenic | 55.0% | |
| CTATCGGACAGCAGTCAGAC+CGG | + | chr1_4:45849435-45849454 | Msa0165390:intron | 55.0% | |
| !! | GTATGGTACGGAGTGTTGGG+CGG | + | chr1_4:45849465-45849484 | Msa0165390:intron | 55.0% |
| CGGAGATGAGGATGTTGCGT+TGG | + | chr1_4:45849521-45849540 | Msa0165390:intron | 55.0% | |
| CTTCTTACCACGGCGTCTAC+GGG | - | chr1_4:45849673-45849692 | None:intergenic | 55.0% | |
| ACTAAGTGGGGTCGGCTACA+TGG | - | chr1_4:45849840-45849859 | None:intergenic | 55.0% | |
| ATGTAGCCGACCCCACTTAG+TGG | + | chr1_4:45849839-45849858 | Msa0165390:intron | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr1_4:45849840-45849859 | Msa0165390:intron | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr1_4:45849846-45849865 | Msa0165390:intron | 55.0% | |
| ! | AGTGGCTGGTGGATAGTCTG+TGG | + | chr1_4:45850042-45850061 | Msa0165390:intron | 55.0% |
| ! | GTGGCTGGTGGATAGTCTGT+GGG | + | chr1_4:45850043-45850062 | Msa0165390:intron | 55.0% |
| ! | TGGCTGGTGGATAGTCTGTG+GGG | + | chr1_4:45850044-45850063 | Msa0165390:intron | 55.0% |
| AGATCTGACCAGACTCCGAC+TGG | + | chr1_4:45850390-45850409 | Msa0165390:CDS | 55.0% | |
| TGGAGGGGGAGAGAGGAGTT+GGG | - | chr1_4:45846922-45846941 | None:intergenic | 60.0% | |
| TGAAAGCTGGAGGGGGAGAG+AGG | - | chr1_4:45846929-45846948 | None:intergenic | 60.0% | |
| AAGGGGGTGAAAGCTGGAGG+GGG | - | chr1_4:45846936-45846955 | None:intergenic | 60.0% | |
| GAAGGGGGTGAAAGCTGGAG+GGG | - | chr1_4:45846937-45846956 | None:intergenic | 60.0% | |
| CCACCCATGGGATTGGAGGT+TGG | - | chr1_4:45847078-45847097 | None:intergenic | 60.0% | |
| CCAACCTCCAATCCCATGGG+TGG | + | chr1_4:45847075-45847094 | Msa0165390:intron | 60.0% | |
| !! | AGTGGTGCCACCCATGGGAT+TGG | - | chr1_4:45847085-45847104 | None:intergenic | 60.0% |
| GAGGTTGCGACAATGGAGGG+TGG | + | chr1_4:45847420-45847439 | Msa0165390:intron | 60.0% | |
| AGTTGGGAGAGACCAGAGGG+CGG | + | chr1_4:45847451-45847470 | Msa0165390:intron | 60.0% | |
| GGGGGAGCTGGGAAGGTAAA+GGG | + | chr1_4:45847472-45847491 | Msa0165390:intron | 60.0% | |
| GGAGCTGGGAAGGTAAAGGG+AGG | + | chr1_4:45847475-45847494 | Msa0165390:intron | 60.0% | |
| TGTGTTGGGATGGAGGAGGG+TGG | + | chr1_4:45847688-45847707 | Msa0165390:intron | 60.0% | |
| GGAGGGTGGCAGCAAAGAGT+TGG | + | chr1_4:45847702-45847721 | Msa0165390:intron | 60.0% | |
| TTGGGAGAGACCAGAGGGTG+AGG | + | chr1_4:45847721-45847740 | Msa0165390:intron | 60.0% | |
| TGGGAGAGACCAGAGGGTGA+GGG | + | chr1_4:45847722-45847741 | Msa0165390:intron | 60.0% | |
| TTACCAGCTCCCTCACCCTC+TGG | - | chr1_4:45847734-45847753 | None:intergenic | 60.0% | |
| AGAGGGTGAGGGAGCTGGTA+AGG | + | chr1_4:45847733-45847752 | Msa0165390:intron | 60.0% | |
| GGTGAGGGAGCTGGTAAGGT+TGG | + | chr1_4:45847737-45847756 | Msa0165390:intron | 60.0% | |
| GAGGGAGCTGGTAAGGTTGG+GGG | + | chr1_4:45847740-45847759 | Msa0165390:intron | 60.0% | |
| CTGGTAAGGTTGGGGGTGGA+AGG | + | chr1_4:45847747-45847766 | Msa0165390:intron | 60.0% | |
| GTAAGGTTGGGGGTGGAAGG+AGG | + | chr1_4:45847750-45847769 | Msa0165390:intron | 60.0% | |
| GAAGGAGGAGGTGAGTGAGG+TGG | + | chr1_4:45847962-45847981 | Msa0165390:intron | 60.0% | |
| AGGAGGTGAGTGAGGTGGGT+GGG | + | chr1_4:45847967-45847986 | Msa0165390:intron | 60.0% | |
| ! | TCGTCGGATTCAGGAGCACG+AGG | + | chr1_4:45848379-45848398 | Msa0165390:intron | 60.0% |
| GCTTCCATAGTCGACCTCCC+AGG | - | chr1_4:45848728-45848747 | None:intergenic | 60.0% | |
| CCCTGGAGAAGAAAGGGGTG+AGG | + | chr1_4:45848867-45848886 | Msa0165390:intron | 60.0% | |
| AGGGGGCTTCGACTAGTGTG+AGG | + | chr1_4:45848924-45848943 | Msa0165390:intron | 60.0% | |
| AGGACGCAGGATGGGGATAC+CGG | + | chr1_4:45848944-45848963 | Msa0165390:intron | 60.0% | |
| ! | CTTGCTTGGTGAGTCGAGGG+AGG | + | chr1_4:45849102-45849121 | Msa0165390:intron | 60.0% |
| CGAGGGAGGAGTTAAACGGG+AGG | + | chr1_4:45849116-45849135 | Msa0165390:intron | 60.0% | |
| ACGGGAGGCTAGAGACTTGG+AGG | + | chr1_4:45849131-45849150 | Msa0165390:intron | 60.0% | |
| !! | TCGCCGGCGTTTGGTGCCTT+TGG | - | chr1_4:45842682-45842701 | None:intergenic | 65.0% |
| GGAGGGGGAGAGAGGAGTTG+GGG | - | chr1_4:45846921-45846940 | None:intergenic | 65.0% | |
| CTGGAGGGGGAGAGAGGAGT+TGG | - | chr1_4:45846923-45846942 | None:intergenic | 65.0% | |
| ! | GGTGCCACCCATGGGATTGG+AGG | - | chr1_4:45847082-45847101 | None:intergenic | 65.0% |
| GTTGGGAGAGACCAGAGGGC+GGG | + | chr1_4:45847452-45847471 | Msa0165390:intron | 65.0% | |
| TTGGGAGAGACCAGAGGGCG+GGG | + | chr1_4:45847453-45847472 | Msa0165390:intron | 65.0% | |
| CGGGGGAGCTGGGAAGGTAA+AGG | + | chr1_4:45847471-45847490 | Msa0165390:intron | 65.0% | |
| AGACCAGAGGGTGAGGGAGC+TGG | + | chr1_4:45847728-45847747 | Msa0165390:intron | 65.0% | |
| GGAGCTGGTAAGGTTGGGGG+TGG | + | chr1_4:45847743-45847762 | Msa0165390:intron | 65.0% | |
| GAGGAGGTGAGTGAGGTGGG+TGG | + | chr1_4:45847966-45847985 | Msa0165390:intron | 65.0% | |
| GAGAAGACCCGTAGACGCCG+TGG | + | chr1_4:45849663-45849682 | Msa0165390:intron | 65.0% | |
| ! | GTGGGTTGCGCAACCCGACC+TGG | + | chr1_4:45844709-45844728 | Msa0165390:intron | 70.0% |
| TGGGAGAGACCAGAGGGCGG+GGG | + | chr1_4:45847454-45847473 | Msa0165390:intron | 70.0% | |
| AGACCAGAGGGCGGGGGAGC+TGG | + | chr1_4:45847460-45847479 | Msa0165390:intron | 75.0% | |
| GACCAGAGGGCGGGGGAGCT+GGG | + | chr1_4:45847461-45847480 | Msa0165390:intron | 75.0% | |
| TTCCCAGCTCCCCCGCCCTC+TGG | - | chr1_4:45847466-45847485 | None:intergenic | 75.0% | |
| AGAGGGCGGGGGAGCTGGGA+AGG | + | chr1_4:45847465-45847484 | Msa0165390:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 45842620 | 45850677 | 45842620 | ID=Msa0165390;Name=Msa0165390 |
| chr1_4 | mRNA | 45842620 | 45850677 | 45842620 | ID=Msa0165390-mRNA-1;Parent=Msa0165390;Name=Msa0165390-mRNA-1;_AED=0.11;_eAED=0.11;_QI=34|1|1|1|0.71|1|8|237|265 |
| chr1_4 | exon | 45842620 | 45842741 | 45842620 | ID=Msa0165390-mRNA-1:exon:13160;Parent=Msa0165390-mRNA-1 |
| chr1_4 | exon | 45842819 | 45842892 | 45842819 | ID=Msa0165390-mRNA-1:exon:13161;Parent=Msa0165390-mRNA-1 |
| chr1_4 | exon | 45842981 | 45843061 | 45842981 | ID=Msa0165390-mRNA-1:exon:13162;Parent=Msa0165390-mRNA-1 |
| chr1_4 | exon | 45843205 | 45843297 | 45843205 | ID=Msa0165390-mRNA-1:exon:13163;Parent=Msa0165390-mRNA-1 |
| chr1_4 | exon | 45843942 | 45844061 | 45843942 | ID=Msa0165390-mRNA-1:exon:13164;Parent=Msa0165390-mRNA-1 |
| chr1_4 | exon | 45845104 | 45845175 | 45845104 | ID=Msa0165390-mRNA-1:exon:13165;Parent=Msa0165390-mRNA-1 |
| chr1_4 | exon | 45845978 | 45846055 | 45845978 | ID=Msa0165390-mRNA-1:exon:13166;Parent=Msa0165390-mRNA-1 |
| chr1_4 | exon | 45850249 | 45850677 | 45850249 | ID=Msa0165390-mRNA-1:exon:13167;Parent=Msa0165390-mRNA-1 |
| chr1_4 | five_prime_UTR | 45842620 | 45842653 | 45842620 | ID=Msa0165390-mRNA-1:five_prime_utr;Parent=Msa0165390-mRNA-1 |
| chr1_4 | CDS | 45842654 | 45842741 | 45842654 | ID=Msa0165390-mRNA-1:cds;Parent=Msa0165390-mRNA-1 |
| chr1_4 | CDS | 45842819 | 45842892 | 45842819 | ID=Msa0165390-mRNA-1:cds;Parent=Msa0165390-mRNA-1 |
| chr1_4 | CDS | 45842981 | 45843061 | 45842981 | ID=Msa0165390-mRNA-1:cds;Parent=Msa0165390-mRNA-1 |
| chr1_4 | CDS | 45843205 | 45843297 | 45843205 | ID=Msa0165390-mRNA-1:cds;Parent=Msa0165390-mRNA-1 |
| chr1_4 | CDS | 45843942 | 45844061 | 45843942 | ID=Msa0165390-mRNA-1:cds;Parent=Msa0165390-mRNA-1 |
| chr1_4 | CDS | 45845104 | 45845175 | 45845104 | ID=Msa0165390-mRNA-1:cds;Parent=Msa0165390-mRNA-1 |
| chr1_4 | CDS | 45845978 | 45846055 | 45845978 | ID=Msa0165390-mRNA-1:cds;Parent=Msa0165390-mRNA-1 |
| chr1_4 | CDS | 45850249 | 45850440 | 45850249 | ID=Msa0165390-mRNA-1:cds;Parent=Msa0165390-mRNA-1 |
| chr1_4 | three_prime_UTR | 45850441 | 45850677 | 45850441 | ID=Msa0165390-mRNA-1:three_prime_utr;Parent=Msa0165390-mRNA-1 |
| Gene Sequence |
| Protein sequence |
