AlfalfaGEDB | Msa0167180

M. sativa cultivar zhongmu-4 / Msa0167180

KEGG: K03676
GO: GO:0003674 GO:0003824 GO:0004362 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006790 GO:0008150 GO:0008152 GO:0009507 GO:0009536 GO:0009636 GO:0009987 GO:0015036 GO:0015037 GO:0015038 GO:0016043 GO:0016209 GO:0016226 GO:0016491 GO:0016651 GO:0016667 GO:0016668 GO:0022607 GO:0031163 GO:0042221 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044085 GO:0044237 GO:0044424 GO:0044444 GO:0044464 GO:0050896 GO:0051186 GO:0051716 GO:0055114 GO:0070887 GO:0071840 GO:0097237 GO:0098754 GO:0098869 GO:1990748
PFAM: PF00462.27

Nr:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score

Swissprot:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0167180	sp\|Q8GWS0\|GRXC5_ARATH	71.053	76	19	1	75	147	65	140	4.72e-36	126

Trembl:

Query id	Subject id	identity %	alignment length	mis matches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0167180	I3S8X9	91.083	157	6	4	1	150	1	156	2.82e-72	225

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network

Gene1	Gene2	correlation coefficient	p_value	FDR
Msa0074880	Msa0167180	0.862047	6.683046e-64	-8.615850e-47
Msa0167180	Msa0213620	0.800829	1.199404e-48	-8.615850e-47
Msa0167180	Msa0383870	0.806512	7.934880e-50	-8.615850e-47
Msa0167180	Msa0480090	0.814555	1.451456e-51	-8.615850e-47

PPI

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0167180	MtrunA17_Chr1g0182971	91.083	157	6	4	1	150	1	156	5.42e-76	225
Msa0167180	MtrunA17_Chr3g0117411	42.697	89	50	1	60	148	1	88	5.34e-16	70.5
Msa0167180	MtrunA17_Chr7g0228311	52.941	68	31	1	81	148	7	73	5.59e-16	70.1
Msa0167180	MtrunA17_Chr2g0299021	41.489	94	49	3	64	156	74	162	1.17e-14	68.6
Msa0167180	MtrunA17_Chr3g0117391	45.588	68	36	1	81	148	25	91	4.57e-14	65.5
Msa0167180	MtrunA17_Chr5g0404751	43.056	72	39	2	80	150	36	106	2.92e-13	63.5
Msa0167180	MtrunA17_Chr7g0224091	41.892	74	41	2	78	150	23	95	5.71e-12	60.1
Msa0167180	MtrunA17_Chr7g0268761	34.043	94	60	2	87	180	11	102	3.75e-11	57.4
Msa0167180	MtrunA17_Chr4g0066791	40.541	74	42	2	78	150	2	74	4.39e-11	57.0
Msa0167180	MtrunA17_Chr4g0066801	40.541	74	42	2	78	150	2	74	4.39e-11	57.0
Msa0167180	MtrunA17_Chr4g0066811	40.541	74	42	2	78	150	2	74	4.39e-11	57.0
Msa0167180	MtrunA17_Chr1g0195951	39.726	73	43	1	78	150	2	73	6.59e-11	56.6

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
Msa0167180	AT4G28730.2	70.513	78	20	1	75	149	65	142	1.16e-37	127
Msa0167180	AT4G28730.1	71.053	76	19	1	75	147	65	140	4.80e-37	126
Msa0167180	AT2G20270.1	68.919	74	23	0	77	150	75	148	9.86e-33	115
Msa0167180	AT2G20270.2	50.495	101	23	1	77	150	75	175	1.37e-26	100
Msa0167180	AT5G63030.1	52.239	67	31	1	81	147	23	88	2.20e-15	69.3
Msa0167180	AT5G20500.1	43.182	88	46	3	64	150	21	105	3.59e-15	68.9
Msa0167180	AT5G40370.1	47.887	71	36	1	78	148	4	73	6.06e-14	65.1
Msa0167180	AT1G77370.1	37.079	89	50	3	63	150	24	107	2.35e-12	61.6
Msa0167180	AT2G47870.1	36.486	74	45	2	78	150	2	74	2.36e-12	60.8

Find 50 sgRNAs with CRISPR-Local

Find 120 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
GTGTTCCTTGGGTTTAAATT+AGG	0.230693	1_4:+48970030	None:intergenic
TCCACAATTGCAGAAGTTAT+TGG	0.236945	1_4:-48970320	Msa0167180:CDS
ACTGTCCCAAATGTCTTTAT+TGG	0.269990	1_4:-48970277	Msa0167180:CDS
TGCTTACCAATAAAGACATT+TGG	0.309384	1_4:+48970271	None:intergenic
GGTCATTGAATTGGACGAAT+TGG	0.311156	1_4:-48970448	Msa0167180:CDS
TCTTCTTCTTCTCCTTCTTT+CGG	0.329684	1_4:-48970597	Msa0167180:CDS
TCAACCATTGGTCATTGAAT+TGG	0.339849	1_4:-48970457	Msa0167180:CDS
ATGGGTGAAGGAGTGGAAAT+GGG	0.349172	1_4:+48970696	None:intergenic
TTTACACATACATGCGTTGC+CGG	0.370318	1_4:-48970196	Msa0167180:CDS
GATGGGTGAAGGAGTGGAAA+TGG	0.372694	1_4:+48970695	None:intergenic
GCTTACCAATAAAGACATTT+GGG	0.379345	1_4:+48970272	None:intergenic
GATTTAGAATAAACAACAAC+AGG	0.399918	1_4:+48970531	None:intergenic
TCCAATAACTTCTGCAATTG+TGG	0.404965	1_4:+48970319	None:intergenic
GTCATTGAATTGGACGAATT+GGG	0.409560	1_4:-48970447	Msa0167180:intron
GGTGTAGAAAGTGAAAATTT+TGG	0.420415	1_4:+48970719	None:intergenic
AGACATTTGGGACAGTGTAT+TGG	0.422317	1_4:+48970284	None:intergenic
TAGGATTAATATTTGACAAA+AGG	0.428961	1_4:+48970049	None:intergenic
TTGTTGTTTATTCTAAATCC+TGG	0.449421	1_4:-48970527	Msa0167180:CDS
GTGAATAATGGCTTCATCAA+TGG	0.451455	1_4:-48970808	None:intergenic
TTGACGTGACAACACATCAT+TGG	0.463760	1_4:-48970152	Msa0167180:exon
TCGAGACGAGAGCCGAAAGA+AGG	0.476392	1_4:+48970585	None:intergenic
GAGGATGAAGAAGAAGAAGA+AGG	0.484233	1_4:+48970747	None:intergenic
TGATGCATTGGTGATGATGA+TGG	0.500169	1_4:+48970677	None:intergenic
GGAGAAGAAGAAGAGGGAGA+AGG	0.503916	1_4:+48970606	None:intergenic
AGACATGGCTCGAGGGAAAG+TGG	0.505541	1_4:+48970641	None:intergenic
TTCTGCAATTGTGGACCTTG+TGG	0.506196	1_4:+48970328	None:intergenic
CTCAGAGCAATAAGAGCACC+AGG	0.519483	1_4:+48970509	None:intergenic
AAGTTATTGGAAAGAATCAC+TGG	0.522538	1_4:-48970307	Msa0167180:CDS
GAAAGAAGGAGAAGAAGAAG+AGG	0.525353	1_4:+48970599	None:intergenic
TGGGTGAAGGAGTGGAAATG+GGG	0.529038	1_4:+48970697	None:intergenic
TGCGCGGCGTGATGATGCAT+TGG	0.565062	1_4:+48970665	None:intergenic
GATGATGATGGGTGAAGGAG+TGG	0.565535	1_4:+48970689	None:intergenic
GACATGGCTCGAGGGAAAGT+GGG	0.576041	1_4:+48970642	None:intergenic
TTAATCCTAATTTAAACCCA+AGG	0.578067	1_4:-48970035	Msa0167180:three_prime_UTR
GAAACTCGGTACTCAACCAT+TGG	0.578067	1_4:-48970469	Msa0167180:CDS
TCGTCCAATTCAATGACCAA+TGG	0.582756	1_4:+48970453	None:intergenic
CTCGAGGGAAAGTGGGTGCG+CGG	0.586414	1_4:+48970649	None:intergenic
ATTGAATCTGAAACACATAC+CGG	0.587372	1_4:+48970177	None:intergenic
AAAGAAGGAGAAGAAGAAGA+GGG	0.596305	1_4:+48970600	None:intergenic
GGGTGAAGGAGTGGAAATGG+GGG	0.597848	1_4:+48970698	None:intergenic
AGGAGATGAAGAAGAAGACA+TGG	0.598308	1_4:+48970626	None:intergenic
AAATCCTTGTTCAAGAAACT+CGG	0.607350	1_4:-48970483	Msa0167180:CDS
AGTACCGAGTTTCTTGAACA+AGG	0.611087	1_4:+48970479	None:intergenic
GAAGAAGAAGACATGGCTCG+AGG	0.616205	1_4:+48970633	None:intergenic
TTTCTGTGTTTAGGTCCACA+AGG	0.618825	1_4:-48970343	Msa0167180:intron
AAGAAGAAGACATGGCTCGA+GGG	0.621645	1_4:+48970634	None:intergenic
CTGGTGCTCTTATTGCTCTG+AGG	0.633125	1_4:-48970508	Msa0167180:CDS
GATGCATTGGTGATGATGAT+GGG	0.639376	1_4:+48970678	None:intergenic
TTGGTGATGATGATGGGTGA+AGG	0.644107	1_4:+48970684	None:intergenic
ATTTAGAATAAACAACAACA+GGG	0.680559	1_4:+48970532	None:intergenic

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content
!!!	ATTTAGAATAAACAACAACA+GGG	+	chr1_4:48970298-48970317	None:intergenic	20.0%
!!	TAGGATTAATATTTGACAAA+AGG	+	chr1_4:48970781-48970800	None:intergenic	20.0%
!!!	ATTTAGAATAAACAACAACA+GGG	+	chr1_4:48970298-48970317	None:intergenic	20.0%
!!	TAGGATTAATATTTGACAAA+AGG	+	chr1_4:48970781-48970800	None:intergenic	20.0%
!!	GATTTAGAATAAACAACAAC+AGG	+	chr1_4:48970299-48970318	None:intergenic	25.0%
!!!	TTGTTGTTTATTCTAAATCC+TGG	-	chr1_4:48970300-48970319	Msa0167180:CDS	25.0%
!	GCAATAATTGAGGTTAATTA+GGG	+	chr1_4:48970418-48970437	None:intergenic	25.0%
!	AGCAATAATTGAGGTTAATT+AGG	+	chr1_4:48970419-48970438	None:intergenic	25.0%
!	ATCCATGAATAAATTTGCAA+TGG	+	chr1_4:48970444-48970463	None:intergenic	25.0%
!!	CTTAATTGATTTCTGTGTTT+AGG	-	chr1_4:48970475-48970494	Msa0167180:CDS	25.0%
!	TTAATCCTAATTTAAACCCA+AGG	-	chr1_4:48970792-48970811	Msa0167180:CDS	25.0%
!!	GATTTAGAATAAACAACAAC+AGG	+	chr1_4:48970299-48970318	None:intergenic	25.0%
!!!	TTGTTGTTTATTCTAAATCC+TGG	-	chr1_4:48970300-48970319	Msa0167180:CDS	25.0%
!	GCAATAATTGAGGTTAATTA+GGG	+	chr1_4:48970418-48970437	None:intergenic	25.0%
!	AGCAATAATTGAGGTTAATT+AGG	+	chr1_4:48970419-48970438	None:intergenic	25.0%
!	ATCCATGAATAAATTTGCAA+TGG	+	chr1_4:48970444-48970463	None:intergenic	25.0%
!!	CTTAATTGATTTCTGTGTTT+AGG	-	chr1_4:48970475-48970494	Msa0167180:CDS	25.0%
!	TTAATCCTAATTTAAACCCA+AGG	-	chr1_4:48970792-48970811	Msa0167180:CDS	25.0%
!!	AGTGAAAATTTTGGAGATAG+AGG	+	chr1_4:48970102-48970121	None:intergenic	30.0%
!	GGTGTAGAAAGTGAAAATTT+TGG	+	chr1_4:48970111-48970130	None:intergenic	30.0%
	AAATCCTTGTTCAAGAAACT+CGG	-	chr1_4:48970344-48970363	Msa0167180:intron	30.0%
	TGCCATTGCAAATTTATTCA+TGG	-	chr1_4:48970439-48970458	Msa0167180:intron	30.0%
	AAGTTATTGGAAAGAATCAC+TGG	-	chr1_4:48970520-48970539	Msa0167180:CDS	30.0%
	GCTTACCAATAAAGACATTT+GGG	+	chr1_4:48970558-48970577	None:intergenic	30.0%
	TGCTTACCAATAAAGACATT+TGG	+	chr1_4:48970559-48970578	None:intergenic	30.0%
!	ATTGAATCTGAAACACATAC+CGG	+	chr1_4:48970653-48970672	None:intergenic	30.0%
!!	AGTGAAAATTTTGGAGATAG+AGG	+	chr1_4:48970102-48970121	None:intergenic	30.0%
!	GGTGTAGAAAGTGAAAATTT+TGG	+	chr1_4:48970111-48970130	None:intergenic	30.0%
	AAATCCTTGTTCAAGAAACT+CGG	-	chr1_4:48970344-48970363	Msa0167180:intron	30.0%
	TGCCATTGCAAATTTATTCA+TGG	-	chr1_4:48970439-48970458	Msa0167180:intron	30.0%
	AAGTTATTGGAAAGAATCAC+TGG	-	chr1_4:48970520-48970539	Msa0167180:CDS	30.0%
	GCTTACCAATAAAGACATTT+GGG	+	chr1_4:48970558-48970577	None:intergenic	30.0%
	TGCTTACCAATAAAGACATT+TGG	+	chr1_4:48970559-48970578	None:intergenic	30.0%
!	ATTGAATCTGAAACACATAC+CGG	+	chr1_4:48970653-48970672	None:intergenic	30.0%
	AGGATGAAGAAGAAGAAGAA+GGG	+	chr1_4:48970082-48970101	None:intergenic	35.0%
	AAAGAAGGAGAAGAAGAAGA+GGG	+	chr1_4:48970230-48970249	None:intergenic	35.0%
	TCTTCTTCTTCTCCTTCTTT+CGG	-	chr1_4:48970230-48970249	Msa0167180:CDS	35.0%
!!	TTGAGAAACGGTGTTTTTGA+TGG	+	chr1_4:48970273-48970292	None:intergenic	35.0%
!!!	AACAACAGGGTTTTGAGAAA+CGG	+	chr1_4:48970285-48970304	None:intergenic	35.0%
	TCAACCATTGGTCATTGAAT+TGG	-	chr1_4:48970370-48970389	Msa0167180:intron	35.0%
	GTCATTGAATTGGACGAATT+GGG	-	chr1_4:48970380-48970399	Msa0167180:intron	35.0%
	TCCACAATTGCAGAAGTTAT+TGG	-	chr1_4:48970507-48970526	Msa0167180:CDS	35.0%
	TCCAATAACTTCTGCAATTG+TGG	+	chr1_4:48970511-48970530	None:intergenic	35.0%
	ACTGTCCCAAATGTCTTTAT+TGG	-	chr1_4:48970550-48970569	Msa0167180:CDS	35.0%
	GTGTTCCTTGGGTTTAAATT+AGG	+	chr1_4:48970800-48970819	None:intergenic	35.0%
	AGGATGAAGAAGAAGAAGAA+GGG	+	chr1_4:48970082-48970101	None:intergenic	35.0%
	AAAGAAGGAGAAGAAGAAGA+GGG	+	chr1_4:48970230-48970249	None:intergenic	35.0%
	TCTTCTTCTTCTCCTTCTTT+CGG	-	chr1_4:48970230-48970249	Msa0167180:CDS	35.0%
!!	TTGAGAAACGGTGTTTTTGA+TGG	+	chr1_4:48970273-48970292	None:intergenic	35.0%
!!!	AACAACAGGGTTTTGAGAAA+CGG	+	chr1_4:48970285-48970304	None:intergenic	35.0%
	TCAACCATTGGTCATTGAAT+TGG	-	chr1_4:48970370-48970389	Msa0167180:intron	35.0%
	GTCATTGAATTGGACGAATT+GGG	-	chr1_4:48970380-48970399	Msa0167180:intron	35.0%
	TCCACAATTGCAGAAGTTAT+TGG	-	chr1_4:48970507-48970526	Msa0167180:CDS	35.0%
	TCCAATAACTTCTGCAATTG+TGG	+	chr1_4:48970511-48970530	None:intergenic	35.0%
	ACTGTCCCAAATGTCTTTAT+TGG	-	chr1_4:48970550-48970569	Msa0167180:CDS	35.0%
	GTGTTCCTTGGGTTTAAATT+AGG	+	chr1_4:48970800-48970819	None:intergenic	35.0%
	GAGGATGAAGAAGAAGAAGA+AGG	+	chr1_4:48970083-48970102	None:intergenic	40.0%
!!	GATGCATTGGTGATGATGAT+GGG	+	chr1_4:48970152-48970171	None:intergenic	40.0%
!!	TGATGCATTGGTGATGATGA+TGG	+	chr1_4:48970153-48970172	None:intergenic	40.0%
	AGGAGATGAAGAAGAAGACA+TGG	+	chr1_4:48970204-48970223	None:intergenic	40.0%
	GAAAGAAGGAGAAGAAGAAG+AGG	+	chr1_4:48970231-48970250	None:intergenic	40.0%
!	AGTACCGAGTTTCTTGAACA+AGG	+	chr1_4:48970351-48970370	None:intergenic	40.0%
	TCGTCCAATTCAATGACCAA+TGG	+	chr1_4:48970377-48970396	None:intergenic	40.0%
	GGTCATTGAATTGGACGAAT+TGG	-	chr1_4:48970379-48970398	Msa0167180:intron	40.0%
	GCAATGGCAAGCAATAATTG+AGG	+	chr1_4:48970428-48970447	None:intergenic	40.0%
	TTTCTGTGTTTAGGTCCACA+AGG	-	chr1_4:48970484-48970503	Msa0167180:CDS	40.0%
!	AGACATTTGGGACAGTGTAT+TGG	+	chr1_4:48970546-48970565	None:intergenic	40.0%
	TTTACACATACATGCGTTGC+CGG	-	chr1_4:48970631-48970650	Msa0167180:CDS	40.0%
	TTGACGTGACAACACATCAT+TGG	-	chr1_4:48970675-48970694	Msa0167180:CDS	40.0%
	GAGGATGAAGAAGAAGAAGA+AGG	+	chr1_4:48970083-48970102	None:intergenic	40.0%
!!	GATGCATTGGTGATGATGAT+GGG	+	chr1_4:48970152-48970171	None:intergenic	40.0%
!!	TGATGCATTGGTGATGATGA+TGG	+	chr1_4:48970153-48970172	None:intergenic	40.0%
	AGGAGATGAAGAAGAAGACA+TGG	+	chr1_4:48970204-48970223	None:intergenic	40.0%
	GAAAGAAGGAGAAGAAGAAG+AGG	+	chr1_4:48970231-48970250	None:intergenic	40.0%
!	AGTACCGAGTTTCTTGAACA+AGG	+	chr1_4:48970351-48970370	None:intergenic	40.0%
	TCGTCCAATTCAATGACCAA+TGG	+	chr1_4:48970377-48970396	None:intergenic	40.0%
	GGTCATTGAATTGGACGAAT+TGG	-	chr1_4:48970379-48970398	Msa0167180:intron	40.0%
	GCAATGGCAAGCAATAATTG+AGG	+	chr1_4:48970428-48970447	None:intergenic	40.0%
	TTTCTGTGTTTAGGTCCACA+AGG	-	chr1_4:48970484-48970503	Msa0167180:CDS	40.0%
!	AGACATTTGGGACAGTGTAT+TGG	+	chr1_4:48970546-48970565	None:intergenic	40.0%
	TTTACACATACATGCGTTGC+CGG	-	chr1_4:48970631-48970650	Msa0167180:CDS	40.0%
	TTGACGTGACAACACATCAT+TGG	-	chr1_4:48970675-48970694	Msa0167180:CDS	40.0%
!	GGGTTTTTGTTGAAGTAGCG+AGG	+	chr1_4:48970062-48970081	None:intergenic	45.0%
	ATGGGTGAAGGAGTGGAAAT+GGG	+	chr1_4:48970134-48970153	None:intergenic	45.0%
!!	TTGGTGATGATGATGGGTGA+AGG	+	chr1_4:48970146-48970165	None:intergenic	45.0%
	AAGAAGAAGACATGGCTCGA+GGG	+	chr1_4:48970196-48970215	None:intergenic	45.0%
	GAAACTCGGTACTCAACCAT+TGG	-	chr1_4:48970358-48970377	Msa0167180:intron	45.0%
	TTCTGCAATTGTGGACCTTG+TGG	+	chr1_4:48970502-48970521	None:intergenic	45.0%
!	GGGTTTTTGTTGAAGTAGCG+AGG	+	chr1_4:48970062-48970081	None:intergenic	45.0%
	ATGGGTGAAGGAGTGGAAAT+GGG	+	chr1_4:48970134-48970153	None:intergenic	45.0%
!!	TTGGTGATGATGATGGGTGA+AGG	+	chr1_4:48970146-48970165	None:intergenic	45.0%
	AAGAAGAAGACATGGCTCGA+GGG	+	chr1_4:48970196-48970215	None:intergenic	45.0%
	GAAACTCGGTACTCAACCAT+TGG	-	chr1_4:48970358-48970377	Msa0167180:intron	45.0%
	TTCTGCAATTGTGGACCTTG+TGG	+	chr1_4:48970502-48970521	None:intergenic	45.0%
	TGGGTGAAGGAGTGGAAATG+GGG	+	chr1_4:48970133-48970152	None:intergenic	50.0%
	GATGGGTGAAGGAGTGGAAA+TGG	+	chr1_4:48970135-48970154	None:intergenic	50.0%
!!	GATGATGATGGGTGAAGGAG+TGG	+	chr1_4:48970141-48970160	None:intergenic	50.0%
	GAAGAAGAAGACATGGCTCG+AGG	+	chr1_4:48970197-48970216	None:intergenic	50.0%
	GGAGAAGAAGAAGAGGGAGA+AGG	+	chr1_4:48970224-48970243	None:intergenic	50.0%
!!	CTCAGAGCAATAAGAGCACC+AGG	+	chr1_4:48970321-48970340	None:intergenic	50.0%
	CTGGTGCTCTTATTGCTCTG+AGG	-	chr1_4:48970319-48970338	Msa0167180:CDS	50.0%
	TGGGTGAAGGAGTGGAAATG+GGG	+	chr1_4:48970133-48970152	None:intergenic	50.0%
	GATGGGTGAAGGAGTGGAAA+TGG	+	chr1_4:48970135-48970154	None:intergenic	50.0%
!!	GATGATGATGGGTGAAGGAG+TGG	+	chr1_4:48970141-48970160	None:intergenic	50.0%
	GAAGAAGAAGACATGGCTCG+AGG	+	chr1_4:48970197-48970216	None:intergenic	50.0%
	GGAGAAGAAGAAGAGGGAGA+AGG	+	chr1_4:48970224-48970243	None:intergenic	50.0%
!!	CTCAGAGCAATAAGAGCACC+AGG	+	chr1_4:48970321-48970340	None:intergenic	50.0%
	CTGGTGCTCTTATTGCTCTG+AGG	-	chr1_4:48970319-48970338	Msa0167180:CDS	50.0%
	GGGTGAAGGAGTGGAAATGG+GGG	+	chr1_4:48970132-48970151	None:intergenic	55.0%
	GACATGGCTCGAGGGAAAGT+GGG	+	chr1_4:48970188-48970207	None:intergenic	55.0%
	AGACATGGCTCGAGGGAAAG+TGG	+	chr1_4:48970189-48970208	None:intergenic	55.0%
	TCGAGACGAGAGCCGAAAGA+AGG	+	chr1_4:48970245-48970264	None:intergenic	55.0%
	GGGTGAAGGAGTGGAAATGG+GGG	+	chr1_4:48970132-48970151	None:intergenic	55.0%
	GACATGGCTCGAGGGAAAGT+GGG	+	chr1_4:48970188-48970207	None:intergenic	55.0%
	AGACATGGCTCGAGGGAAAG+TGG	+	chr1_4:48970189-48970208	None:intergenic	55.0%
	TCGAGACGAGAGCCGAAAGA+AGG	+	chr1_4:48970245-48970264	None:intergenic	55.0%
!	TGCGCGGCGTGATGATGCAT+TGG	+	chr1_4:48970165-48970184	None:intergenic	60.0%
!	TGCGCGGCGTGATGATGCAT+TGG	+	chr1_4:48970165-48970184	None:intergenic	60.0%
	CTCGAGGGAAAGTGGGTGCG+CGG	+	chr1_4:48970181-48970200	None:intergenic	65.0%
	CTCGAGGGAAAGTGGGTGCG+CGG	+	chr1_4:48970181-48970200	None:intergenic	65.0%

Chromosome	Type	Strat	End	Strand	Name
chr1_4	gene	48970026	48970823	48970026	ID=Msa0167180;Name=Msa0167180
chr1_4	mRNA	48970026	48970823	48970026	ID=Msa0167180-mRNA-1;Parent=Msa0167180;Name=Msa0167180-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0\|0.5\|0.33\|1\|0.5\|0.33\|3\|145\|182
chr1_4	exon	48970026	48970352	48970026	ID=Msa0167180-mRNA-1:exon:14322;Parent=Msa0167180-mRNA-1
chr1_4	exon	48970448	48970582	48970448	ID=Msa0167180-mRNA-1:exon:14321;Parent=Msa0167180-mRNA-1
chr1_4	exon	48970592	48970823	48970592	ID=Msa0167180-mRNA-1:exon:14320;Parent=Msa0167180-mRNA-1
chr1_4	CDS	48970592	48970823	48970592	ID=Msa0167180-mRNA-1:cds;Parent=Msa0167180-mRNA-1
chr1_4	CDS	48970448	48970582	48970448	ID=Msa0167180-mRNA-1:cds;Parent=Msa0167180-mRNA-1
chr1_4	CDS	48970171	48970352	48970171	ID=Msa0167180-mRNA-1:cds;Parent=Msa0167180-mRNA-1
chr1_4	three_prime_UTR	48970026	48970170	48970026	ID=Msa0167180-mRNA-1:three_prime_utr;Parent=Msa0167180-mRNA-1

Gene Sequence

>Msa0167180

ATGGCTTCATCAATGGCGAACACTTTCACTCTTCCTCGCTACTTCAACAAAAACCCTTCTTCTTCTTCTTCATCCTCTATCTCCAAAATTTTCACTTTCTACACCCCCATTTCCACTCCTTCACCCATCATCATCACCAATGCATCATCACGCCGCGCACCCACTTTCCCTCGAGCCATGTCTTCTTCTTCATCTCCTTCTCCCTCTTCTTCTTCTCCTTCTTTCGGCTCTCAAACCATCAAAAACACCGTTTCTCAAAACCCTGTTGTTGTTTATTCTAAATCCTGGTGCTCTTATTGCTCTGAGGTCAAATCCTTGTTCAAGAAACTCGGTACTCAACCATTGGTCATTGAATTGGACGAATTGGGTCCACAAGGTCCACAATTGCAGAAGTTATTGGAAAGAATCACTGGCCAATACACTGTCCCAAATGTCTTTATTGGTAAGCAAAGCAATCGCTCACTAGAGTTTAATTACTATACTGTGACAGTGCAAAATTATTTTACACATACATGCGTTGCCGGTATGTGTTTCAGATTCAATAATTGA

Protein sequence

>Msa0167180

MASSMANTFTLPRYFNKNPSSSSSSSISKIFTFYTPISTPSPIIITNASSRRAPTFPRAMSSSSSPSPSSSSPSFGSQTIKNTVSQNPVVVYSKSWCSYCSEVKSLFKKLGTQPLVIELDELGPQGPQLQKLLERITGQYTVPNVFIGKQSNRSLEFNYYTVTVQNYFTHTCVAGMCFRFNN*