AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0074880


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074880 MtrunA17_Chr1g0182971 77.293 229 7 4 1 226 1 187 7.32e-98 283
Msa0074880 MtrunA17_Chr3g0117411 35.294 136 47 2 86 221 22 116 3.81e-18 77.4
Msa0074880 MtrunA17_Chr7g0228311 36.765 136 45 2 86 221 7 101 9.71e-18 75.9
Msa0074880 MtrunA17_Chr3g0117391 33.571 140 50 3 86 223 25 123 4.63e-17 74.7
Msa0074880 MtrunA17_Chr2g0299021 29.167 144 61 2 73 216 74 176 2.70e-15 71.2
Msa0074880 MtrunA17_Chr5g0404751 40.506 79 45 2 85 162 36 113 2.62e-13 64.7
Msa0074880 MtrunA17_Chr7g0224091 43.243 74 40 2 83 155 23 95 6.21e-12 60.8
Msa0074880 MtrunA17_Chr4g0066791 41.892 74 41 2 83 155 2 74 2.90e-11 58.5
Msa0074880 MtrunA17_Chr4g0066801 41.892 74 41 2 83 155 2 74 2.90e-11 58.5
Msa0074880 MtrunA17_Chr4g0066811 41.892 74 41 2 83 155 2 74 2.90e-11 58.5
Msa0074880 MtrunA17_Chr1g0195951 39.726 73 43 1 83 155 2 73 5.04e-11 57.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0074880 AT4G28730.1 54.422 147 27 2 77 223 65 171 5.74e-52 166
Msa0074880 AT2G20270.1 51.049 143 30 1 81 223 74 176 8.94e-44 145
Msa0074880 AT4G28730.2 74.359 78 20 0 77 154 65 142 1.06e-41 139
Msa0074880 AT2G20270.2 42.941 170 30 2 81 223 74 203 1.92e-37 130
Msa0074880 AT5G63030.1 35.294 136 47 2 86 221 23 117 7.04e-17 74.3
Msa0074880 AT5G20500.1 30.488 164 61 4 61 224 21 131 1.52e-16 73.9
Msa0074880 AT5G40370.1 35.294 136 47 2 86 221 7 101 2.57e-16 72.4
Msa0074880 AT2G47870.1 37.838 74 44 2 83 155 2 74 2.19e-12 62.0
Msa0074880 AT1G77370.1 37.975 79 47 2 85 162 37 114 4.00e-12 62.0

Find 83 sgRNAs with CRISPR-Local

Find 284 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTCAAACCACAGATTTATT+AGG 0.183201 1_2:+49828667 None:intergenic
TCCACAATTGCAGAAGTTAT+TGG 0.236945 1_2:-49831874 Msa0074880:CDS
TTGTGTAATGATTCTTAAAT+TGG 0.245100 1_2:-49828599 Msa0074880:three_prime_UTR
ACTGTCCCAAATGTCTTTAT+TGG 0.269990 1_2:-49831831 Msa0074880:CDS
TGCTTACCAATAAAGACATT+TGG 0.309384 1_2:+49831825 None:intergenic
GGTCATTGAATTGGACGAAT+TGG 0.311156 1_2:-49832002 Msa0074880:CDS
TCTTCTTCTTCTCCTTCTTT+CGG 0.329684 1_2:-49832151 Msa0074880:CDS
TTTACACATACATGCTTTGC+AGG 0.332944 1_2:-49831750 Msa0074880:intron
CCTGCAATGAAGAAAACTTT+AGG 0.335075 1_2:+49829389 None:intergenic
TCAACCATTGGTCATTGAAT+TGG 0.339849 1_2:-49832011 Msa0074880:CDS
CTCAAACCACAGATTTATTA+GGG 0.347149 1_2:+49828668 None:intergenic
ATGGGTGAAGGAGTGGAAAT+GGG 0.349172 1_2:+49832250 None:intergenic
GATGGGTGAAGGAGTGGAAA+TGG 0.372694 1_2:+49832249 None:intergenic
GCTTACCAATAAAGACATTT+GGG 0.379345 1_2:+49831826 None:intergenic
AAATTGGTCATTTAAATGCC+TGG 0.390626 1_2:-49828583 Msa0074880:three_prime_UTR
CCTAATAAATCTGTGGTTTG+AGG 0.394613 1_2:-49828667 Msa0074880:three_prime_UTR
GTTCATCAATTTCATTTGCC+TGG 0.396422 1_2:+49828516 None:intergenic
GATTTAGAATAAACAACAAC+AGG 0.399918 1_2:+49832085 None:intergenic
TCCAATAACTTCTGCAATTG+TGG 0.404965 1_2:+49831873 None:intergenic
AACCGGATCAGATTCCCTTT+AGG 0.406920 1_2:+49828760 None:intergenic
GTCATTGAATTGGACGAATT+GGG 0.409560 1_2:-49832001 Msa0074880:intron
TTATGAATATGAATGAATAA+TGG 0.412200 1_2:+49832421 None:intergenic
AGTAGAAGACTTTAGGTGAT+TGG 0.413743 1_2:-49832466 Msa0074880:five_prime_UTR
AAGAAAAGGAAAGTGAATAA+TGG 0.416747 1_2:-49832380 Msa0074880:exon
GGTGTAGAAAGTGAAAATTT+TGG 0.420415 1_2:+49832273 None:intergenic
AGACATTTGGGACAGTGTAT+TGG 0.422317 1_2:+49831838 None:intergenic
CTAATAAATCTGTGGTTTGA+GGG 0.423527 1_2:-49828666 Msa0074880:three_prime_UTR
CTGCAATGAAGAAAACTTTA+GGG 0.425228 1_2:+49829390 None:intergenic
CAACACATTGGTGGCTGTAC+AGG 0.429960 1_2:-49829362 Msa0074880:intron
CAATATTACTCTCATCCTAA+AGG 0.442708 1_2:-49828775 Msa0074880:three_prime_UTR
AATATTACTCTCATCCTAAA+GGG 0.445240 1_2:-49828774 Msa0074880:three_prime_UTR
ATCTGTGGCTTGAGTGCTCC+AGG 0.446205 1_2:-49828534 Msa0074880:three_prime_UTR
TTGTTGTTTATTCTAAATCC+TGG 0.449421 1_2:-49832081 Msa0074880:CDS
CACAGCAAAACCAAAAGAAA+AGG 0.451093 1_2:-49832394 Msa0074880:intron
GTGAATAATGGCTTCATCAA+TGG 0.451455 1_2:-49832368 Msa0074880:exon
TTCTTACAGTGTTAATTCCC+AGG 0.459473 1_2:+49828565 None:intergenic
CAGATACACTTAAGCTGTAC+AGG 0.473714 1_2:-49828863 Msa0074880:CDS
TCGAGACGAGAGCCGAAAGA+AGG 0.476392 1_2:+49832139 None:intergenic
CTTCTGATAGCAGAGTTTCA+AGG 0.477656 1_2:+49828832 None:intergenic
AATTGGTCATTTAAATGCCT+GGG 0.489244 1_2:-49828582 Msa0074880:three_prime_UTR
ATCCTAAAGGGAATCTGATC+CGG 0.491393 1_2:-49828762 Msa0074880:three_prime_UTR
CATATGCGACAAATTGCAAC+CGG 0.499852 1_2:+49828743 None:intergenic
TGATGCATTGGTGATGATGA+TGG 0.500169 1_2:+49832231 None:intergenic
GGAGAAGAAGAAGAGGGAGA+AGG 0.503916 1_2:+49832160 None:intergenic
AGACATGGCTCGAGGGAAAG+TGG 0.505541 1_2:+49832195 None:intergenic
TTCTGCAATTGTGGACCTTG+TGG 0.506196 1_2:+49831882 None:intergenic
CTCAGAGCAATAAGAGCACC+AGG 0.519483 1_2:+49832063 None:intergenic
AAGTTATTGGAAAGAATCAC+TGG 0.522538 1_2:-49831861 Msa0074880:CDS
GAAAGAAGGAGAAGAAGAAG+AGG 0.525353 1_2:+49832153 None:intergenic
TGGGTGAAGGAGTGGAAATG+GGG 0.529038 1_2:+49832251 None:intergenic
ATTGCAGGTGGCCAACACAT+TGG 0.560668 1_2:-49829374 Msa0074880:CDS
TGCGCGGCGTGATGATGCAT+TGG 0.565062 1_2:+49832219 None:intergenic
GATGATGATGGGTGAAGGAG+TGG 0.565535 1_2:+49832243 None:intergenic
TTGCAATTTGTCGCATATGT+TGG 0.567380 1_2:-49828739 Msa0074880:three_prime_UTR
AATAATGGTCGAACGAAGGA+AGG 0.570467 1_2:+49832436 None:intergenic
GACATGGCTCGAGGGAAAGT+GGG 0.576041 1_2:+49832196 None:intergenic
GAAGAGGCTCATAAAACAGA+AGG 0.576814 1_2:+49828446 None:intergenic
GAAACTCGGTACTCAACCAT+TGG 0.578067 1_2:-49832023 Msa0074880:CDS
GTAGCGAGGAAGAGTGAAAG+TGG 0.580794 1_2:+49832342 None:intergenic
TCGTCCAATTCAATGACCAA+TGG 0.582756 1_2:+49832007 None:intergenic
ATTATGAGATATAAAAGAAG+AGG 0.583284 1_2:+49828430 None:intergenic
CTCGAGGGAAAGTGGGTGCG+CGG 0.586414 1_2:+49832203 None:intergenic
ACAGTATAGTAATTAAACTC+TGG 0.589929 1_2:+49831789 None:intergenic
TTTCTTTGTTTAGGTCCACA+AGG 0.592779 1_2:-49831897 Msa0074880:intron
AAAGAAGGAGAAGAAGAAGA+GGG 0.596305 1_2:+49832154 None:intergenic
GGGTGAAGGAGTGGAAATGG+GGG 0.597848 1_2:+49832252 None:intergenic
AGGAGATGAAGAAGAAGACA+TGG 0.598308 1_2:+49832180 None:intergenic
ACACTTAAGCTGTACAGGAA+AGG 0.605615 1_2:-49828858 Msa0074880:CDS
GTAAGAACTAATTAGATCTG+TGG 0.606616 1_2:-49828549 Msa0074880:three_prime_UTR
AAATCCTTGTTCAAGAAACT+CGG 0.607350 1_2:-49832037 Msa0074880:CDS
AGTACCGAGTTTCTTGAACA+AGG 0.611087 1_2:+49832033 None:intergenic
GCAGGTGGCCAACACATTGG+TGG 0.613270 1_2:-49829371 Msa0074880:CDS
GAAGAAGAAGACATGGCTCG+AGG 0.616205 1_2:+49832187 None:intergenic
AAGAAGAAGACATGGCTCGA+GGG 0.621645 1_2:+49832188 None:intergenic
ATTAGACCCTAATAAATCTG+TGG 0.622082 1_2:-49828674 Msa0074880:three_prime_UTR
CTGGTGCTCTTATTGCTCTG+AGG 0.633125 1_2:-49832062 Msa0074880:CDS
GATGCATTGGTGATGATGAT+GGG 0.639376 1_2:+49832232 None:intergenic
TTGGTGATGATGATGGGTGA+AGG 0.644107 1_2:+49832238 None:intergenic
AAGACTTTAGGTGATTGGTA+CGG 0.645409 1_2:-49832461 Msa0074880:five_prime_UTR
CTGTACAGCCACCAATGTGT+TGG 0.647816 1_2:+49829363 None:intergenic
AATGAATAATGGTCGAACGA+AGG 0.652672 1_2:+49832432 None:intergenic
GGATGAGAGTAATATTGACA+AGG 0.673752 1_2:+49828781 None:intergenic
ATTTAGAATAAACAACAACA+GGG 0.680559 1_2:+49832086 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTAAAACTTTCTTTTTT+TGG - chr1_2:49830709-49830728 Msa0074880:intron 10.0%
!! TTATGAATATGAATGAATAA+TGG + chr1_2:49828478-49828497 None:intergenic 15.0%
!! TTGGATAAAAAAGTTTAATT+AGG - chr1_2:49829340-49829359 Msa0074880:intron 15.0%
!! AATAAATTGAAAAAAGCTTA+AGG - chr1_2:49829460-49829479 Msa0074880:intron 15.0%
!! TTGAAAATTATACGATATAT+AGG - chr1_2:49829661-49829680 Msa0074880:intron 15.0%
!! TGAAAATTATACGATATATA+GGG - chr1_2:49829662-49829681 Msa0074880:intron 15.0%
!!! ATTTAAAATTTAGGTTTTTG+TGG + chr1_2:49830017-49830036 None:intergenic 15.0%
!! CAAATATAGTAATATTACAT+TGG - chr1_2:49830641-49830660 Msa0074880:intron 15.0%
!!! TAATTAACCCTTTTTTTTAT+AGG + chr1_2:49830865-49830884 None:intergenic 15.0%
!! AATGCTATTAAAATTAAGTA+GGG + chr1_2:49831341-49831360 None:intergenic 15.0%
!! AAATGCTATTAAAATTAAGT+AGG + chr1_2:49831340-49831359 None:intergenic 15.0%
!! TTCAAAAATTTAAGAGTTTA+AGG + chr1_2:49831249-49831268 None:intergenic 15.0%
!! AGATAAAAAGTAATAAAATC+TGG - chr1_2:49831149-49831168 Msa0074880:intron 15.0%
!! AAATGCTATTAAAATTAAGT+AGG - chr1_2:49831340-49831359 Msa0074880:intron 15.0%
!! AATGCTATTAAAATTAAGTA+GGG - chr1_2:49831341-49831360 Msa0074880:intron 15.0%
!! AAAAGATAAAATTAAATGCA+GGG + chr1_2:49831464-49831483 None:intergenic 15.0%
!!! ATTTAGAATAAACAACAACA+GGG + chr1_2:49828813-49828832 None:intergenic 20.0%
!!! CTTAATTGATTTCTTTGTTT+AGG - chr1_2:49828990-49829009 Msa0074880:intron 20.0%
!! TAGGATTAATATTTGACAAA+AGG + chr1_2:49829296-49829315 None:intergenic 20.0%
!!! TAAACTTTTTTATCCAAACA+AGG + chr1_2:49829337-49829356 None:intergenic 20.0%
!! GAAATCCAACTTAAAAAATT+AGG - chr1_2:49830481-49830500 Msa0074880:intron 20.0%
!! AAGAATTGAAATACTATATC+AGG + chr1_2:49830551-49830570 None:intergenic 20.0%
!! TTATATTAATCCATAGTTCA+AGG + chr1_2:49830580-49830599 None:intergenic 20.0%
!!! TTGAACTATGGATTAATATA+AGG - chr1_2:49830579-49830598 Msa0074880:intron 20.0%
!!! TGAACTATGGATTAATATAA+GGG - chr1_2:49830580-49830599 Msa0074880:intron 20.0%
!! AACATTTGCCTATAAAAAAA+AGG - chr1_2:49830854-49830873 Msa0074880:intron 20.0%
!! ACATTTGCCTATAAAAAAAA+GGG - chr1_2:49830855-49830874 Msa0074880:intron 20.0%
!!! AATTTTGCGATAATTTTTTG+CGG - chr1_2:49831184-49831203 Msa0074880:intron 20.0%
!! TAAACAAATTTGAATTGAGT+AGG - chr1_2:49831278-49831297 Msa0074880:intron 20.0%
!! AAACAAATTTGAATTGAGTA+GGG - chr1_2:49831279-49831298 Msa0074880:intron 20.0%
!! CAAAAGATAAAATTAAATGC+AGG + chr1_2:49831465-49831484 None:intergenic 20.0%
!! AATGATTGATTATTTAACTG+AGG - chr1_2:49831581-49831600 Msa0074880:intron 20.0%
!! ATGATTGATTATTTAACTGA+GGG - chr1_2:49831582-49831601 Msa0074880:intron 20.0%
!!! TTTCACTGTTAAGATTTTTA+TGG + chr1_2:49831967-49831986 None:intergenic 20.0%
!! TTGTGTAATGATTCTTAAAT+TGG - chr1_2:49832297-49832316 Msa0074880:CDS 20.0%
!! ATTATGAGATATAAAAGAAG+AGG + chr1_2:49832469-49832488 None:intergenic 20.0%
!! TATTCACTTTCCTTTTCTTT+TGG + chr1_2:49828515-49828534 None:intergenic 25.0%
! AAGAAAAGGAAAGTGAATAA+TGG - chr1_2:49828516-49828535 Msa0074880:three_prime_UTR 25.0%
!! GATTTAGAATAAACAACAAC+AGG + chr1_2:49828814-49828833 None:intergenic 25.0%
!!! TTGTTGTTTATTCTAAATCC+TGG - chr1_2:49828815-49828834 Msa0074880:CDS 25.0%
! GCAATAATTGAGGTTAATTA+GGG + chr1_2:49828933-49828952 None:intergenic 25.0%
! AGCAATAATTGAGGTTAATT+AGG + chr1_2:49828934-49828953 None:intergenic 25.0%
! ATCCATGAATAAATTTGCAA+TGG + chr1_2:49828959-49828978 None:intergenic 25.0%
! ACAGTATAGTAATTAAACTC+TGG + chr1_2:49829110-49829129 None:intergenic 25.0%
! TTAATCCTAATTTAAACCCA+AGG - chr1_2:49829307-49829326 Msa0074880:intron 25.0%
!!! ATATTTTAGTCATGCTGATT+AGG - chr1_2:49829563-49829582 Msa0074880:intron 25.0%
! TGATTAGGTTATCATAACTT+AGG - chr1_2:49829578-49829597 Msa0074880:intron 25.0%
! GATATATAAGTAGTACTTCT+GGG - chr1_2:49829684-49829703 Msa0074880:intron 25.0%
!! ACGTGAAGCATTTAAAATTT+AGG + chr1_2:49830026-49830045 None:intergenic 25.0%
! TTAGAAATCATTAGATCCAA+AGG - chr1_2:49830184-49830203 Msa0074880:intron 25.0%
! AAAACATTGCATTGGAAATT+AGG + chr1_2:49830264-49830283 None:intergenic 25.0%
! AATATAAGGGTAATGTTAAC+TGG - chr1_2:49830593-49830612 Msa0074880:intron 25.0%
!!! AATCAAACTTTGTTTTAGCA+GGG + chr1_2:49830989-49831008 None:intergenic 25.0%
!!! TAATCAAACTTTGTTTTAGC+AGG + chr1_2:49830990-49831009 None:intergenic 25.0%
! AGTGCAGAAAAACAAAATTA+GGG - chr1_2:49831312-49831331 Msa0074880:intron 25.0%
!! TTACAAGGTCACTATTTTAT+AGG - chr1_2:49831371-49831390 Msa0074880:intron 25.0%
!! TACAAGGTCACTATTTTATA+GGG - chr1_2:49831372-49831391 Msa0074880:intron 25.0%
! TGATTGATTATTTAACTGAG+GGG - chr1_2:49831583-49831602 Msa0074880:intron 25.0%
! TAACCATTTAAATCCTCTTA+TGG - chr1_2:49831794-49831813 Msa0074880:CDS 25.0%
! TGACAAATATCATTTCTGTT+TGG - chr1_2:49831903-49831922 Msa0074880:intron 25.0%
! AAAATAATGAGGGAAACAAA+AGG + chr1_2:49832005-49832024 None:intergenic 25.0%
! TGCACAAGTAAAAATAATGA+GGG + chr1_2:49832015-49832034 None:intergenic 25.0%
! AATATTACTCTCATCCTAAA+GGG - chr1_2:49832122-49832141 Msa0074880:CDS 25.0%
!! ATTACACAAATTCAGTTTTC+AGG + chr1_2:49832286-49832305 None:intergenic 25.0%
AAGAAGAAGAAGAAGAAGAA+TGG + chr1_2:49828591-49828610 None:intergenic 30.0%
!! AGTGAAAATTTTGGAGATAG+AGG + chr1_2:49828617-49828636 None:intergenic 30.0%
! GGTGTAGAAAGTGAAAATTT+TGG + chr1_2:49828626-49828645 None:intergenic 30.0%
AAATCCTTGTTCAAGAAACT+CGG - chr1_2:49828859-49828878 Msa0074880:CDS 30.0%
TGCCATTGCAAATTTATTCA+TGG - chr1_2:49828954-49828973 Msa0074880:intron 30.0%
AAGTTATTGGAAAGAATCAC+TGG - chr1_2:49829035-49829054 Msa0074880:intron 30.0%
GCTTACCAATAAAGACATTT+GGG + chr1_2:49829073-49829092 None:intergenic 30.0%
TGCTTACCAATAAAGACATT+TGG + chr1_2:49829074-49829093 None:intergenic 30.0%
TATTCCATCATCTTATCTAC+TGG + chr1_2:49829517-49829536 None:intergenic 30.0%
TGATTGAGAGTGGTTATATT+AGG - chr1_2:49829628-49829647 Msa0074880:intron 30.0%
GGATATATAAGTAGTACTTC+TGG - chr1_2:49829683-49829702 Msa0074880:intron 30.0%
ATAGCAAGAGAAATTTCATC+TGG - chr1_2:49829834-49829853 Msa0074880:intron 30.0%
TAGCAAGAGAAATTTCATCT+GGG - chr1_2:49829835-49829854 Msa0074880:intron 30.0%
! AGGAGGAACTTTTGAATATT+TGG - chr1_2:49829959-49829978 Msa0074880:intron 30.0%
GTTGTCTAAAAACATTGCAT+TGG + chr1_2:49830272-49830291 None:intergenic 30.0%
TTTAGACAACTAAATTTCCC+AGG - chr1_2:49830282-49830301 Msa0074880:intron 30.0%
TTAGACAACTAAATTTCCCA+GGG - chr1_2:49830283-49830302 Msa0074880:intron 30.0%
TGCAAACATAGAAATGAAGA+GGG + chr1_2:49830314-49830333 None:intergenic 30.0%
TTGCAAACATAGAAATGAAG+AGG + chr1_2:49830315-49830334 None:intergenic 30.0%
GATATACGTTCTTTACAGAA+AGG + chr1_2:49830425-49830444 None:intergenic 30.0%
ACTCCAATACATGTAATTGT+AGG - chr1_2:49830451-49830470 Msa0074880:intron 30.0%
!!! TGTGGCCTAATTTTTTAAGT+TGG + chr1_2:49830489-49830508 None:intergenic 30.0%
! TACAAGGTCGGTATTTTATA+GGG + chr1_2:49830898-49830917 None:intergenic 30.0%
! TTACAAGGTCGGTATTTTAT+AGG + chr1_2:49830899-49830918 None:intergenic 30.0%
CAAGATTAGAACACTATGAA+AGG - chr1_2:49831052-49831071 Msa0074880:intron 30.0%
CAGTGCAGAAAAACAAAATT+AGG - chr1_2:49831311-49831330 Msa0074880:intron 30.0%
!! GTAACAGACTTATGTTGTTT+TGG + chr1_2:49831442-49831461 None:intergenic 30.0%
CTGCAATGAAGAAAACTTTA+GGG + chr1_2:49831509-49831528 None:intergenic 30.0%
GATTGATTATTTAACTGAGG+GGG - chr1_2:49831584-49831603 Msa0074880:intron 30.0%
ATTGATTATTTAACTGAGGG+GGG - chr1_2:49831585-49831604 Msa0074880:intron 30.0%
ATGCAGACAATTTACATTTG+CGG + chr1_2:49831714-49831733 None:intergenic 30.0%
AGAGGATTTAAATGGTTAAC+TGG + chr1_2:49831792-49831811 None:intergenic 30.0%
! TACATGCATAACTGATAATG+TGG + chr1_2:49831857-49831876 None:intergenic 30.0%
ATGATATTTGTCACAATGAG+AGG + chr1_2:49831896-49831915 None:intergenic 30.0%
CTGCACAAGTAAAAATAATG+AGG + chr1_2:49832016-49832035 None:intergenic 30.0%
AGAAGCTGTTGCTAAAAATA+AGG - chr1_2:49832082-49832101 Msa0074880:CDS 30.0%
GAAGCTGTTGCTAAAAATAA+GGG - chr1_2:49832083-49832102 Msa0074880:CDS 30.0%
AAGCTGTTGCTAAAAATAAG+GGG - chr1_2:49832084-49832103 Msa0074880:CDS 30.0%
CAATATTACTCTCATCCTAA+AGG - chr1_2:49832121-49832140 Msa0074880:CDS 30.0%
ATTAGACCCTAATAAATCTG+TGG - chr1_2:49832222-49832241 Msa0074880:CDS 30.0%
CTCAAACCACAGATTTATTA+GGG + chr1_2:49832231-49832250 None:intergenic 30.0%
CTAATAAATCTGTGGTTTGA+GGG - chr1_2:49832230-49832249 Msa0074880:CDS 30.0%
!!! ATTCAGTTTTCAGGTACAAA+AGG + chr1_2:49832277-49832296 None:intergenic 30.0%
AAATTGGTCATTTAAATGCC+TGG - chr1_2:49832313-49832332 Msa0074880:CDS 30.0%
AATTGGTCATTTAAATGCCT+GGG - chr1_2:49832314-49832333 Msa0074880:CDS 30.0%
GTAAGAACTAATTAGATCTG+TGG - chr1_2:49832347-49832366 Msa0074880:CDS 30.0%
AGTAGAAGACTTTAGGTGAT+TGG - chr1_2:49828430-49828449 Msa0074880:three_prime_UTR 35.0%
AAGACTTTAGGTGATTGGTA+CGG - chr1_2:49828435-49828454 Msa0074880:three_prime_UTR 35.0%
AATGAATAATGGTCGAACGA+AGG + chr1_2:49828467-49828486 None:intergenic 35.0%
CACAGCAAAACCAAAAGAAA+AGG - chr1_2:49828502-49828521 Msa0074880:three_prime_UTR 35.0%
GTGAATAATGGCTTCATCAA+TGG - chr1_2:49828528-49828547 Msa0074880:three_prime_UTR 35.0%
AAAGAAGGAGAAGAAGAAGA+GGG + chr1_2:49828745-49828764 None:intergenic 35.0%
TCTTCTTCTTCTCCTTCTTT+CGG - chr1_2:49828745-49828764 Msa0074880:three_prime_UTR 35.0%
!! TTGAGAAACGGTGTTTTTGA+TGG + chr1_2:49828788-49828807 None:intergenic 35.0%
!!! AACAACAGGGTTTTGAGAAA+CGG + chr1_2:49828800-49828819 None:intergenic 35.0%
TCAACCATTGGTCATTGAAT+TGG - chr1_2:49828885-49828904 Msa0074880:intron 35.0%
GTCATTGAATTGGACGAATT+GGG - chr1_2:49828895-49828914 Msa0074880:intron 35.0%
! TTTCTTTGTTTAGGTCCACA+AGG - chr1_2:49828999-49829018 Msa0074880:intron 35.0%
TCCACAATTGCAGAAGTTAT+TGG - chr1_2:49829022-49829041 Msa0074880:intron 35.0%
TCCAATAACTTCTGCAATTG+TGG + chr1_2:49829026-49829045 None:intergenic 35.0%
ACTGTCCCAAATGTCTTTAT+TGG - chr1_2:49829065-49829084 Msa0074880:intron 35.0%
TTTACACATACATGCTTTGC+AGG - chr1_2:49829146-49829165 Msa0074880:intron 35.0%
GTGTTCCTTGGGTTTAAATT+AGG + chr1_2:49829315-49829334 None:intergenic 35.0%
AAGCTATCATGTAGAGCTTA+TGG - chr1_2:49829436-49829455 Msa0074880:intron 35.0%
TATGCCAGTAGATAAGATGA+TGG - chr1_2:49829510-49829529 Msa0074880:intron 35.0%
TGAGAGTGGTTATATTAGGT+AGG - chr1_2:49829632-49829651 Msa0074880:intron 35.0%
AAACTCTCTTGAAACAACCA+CGG - chr1_2:49829916-49829935 Msa0074880:intron 35.0%
!! GTTTCCCAATGAGTTTGTTA+AGG - chr1_2:49829939-49829958 Msa0074880:intron 35.0%
TCCTCCTTAACAAACTCATT+GGG + chr1_2:49829946-49829965 None:intergenic 35.0%
TTCCTCCTTAACAAACTCAT+TGG + chr1_2:49829947-49829966 None:intergenic 35.0%
CATTGTTAGCAAAATAGCTG+AGG - chr1_2:49830049-49830068 Msa0074880:intron 35.0%
CAACACTTGTATCAAACTCT+TGG + chr1_2:49830153-49830172 None:intergenic 35.0%
! TGATACAAGTGTTGCATTGA+AGG - chr1_2:49830159-49830178 Msa0074880:intron 35.0%
AATGGCAATGACAATGACAA+TGG + chr1_2:49830231-49830250 None:intergenic 35.0%
ACATTGCATTGGAAATTAGG+TGG + chr1_2:49830261-49830280 None:intergenic 35.0%
GATCTCTACTATTTGCACAT+GGG - chr1_2:49830355-49830374 Msa0074880:intron 35.0%
GTTCTTTACAGAAAGGACTT+TGG + chr1_2:49830418-49830437 None:intergenic 35.0%
GAGCCTACAATTACATGTAT+TGG + chr1_2:49830457-49830476 None:intergenic 35.0%
AAACTTTCTGCGATTGTGAA+TGG + chr1_2:49830516-49830535 None:intergenic 35.0%
TAATCCATAGTTCAAGGCAT+GGG + chr1_2:49830574-49830593 None:intergenic 35.0%
TTAATCCATAGTTCAAGGCA+TGG + chr1_2:49830575-49830594 None:intergenic 35.0%
! TTAACATTTTCTCCTTCTCC+CGG + chr1_2:49830814-49830833 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG + chr1_2:49831356-49831375 None:intergenic 35.0%
AAGTAGGGACTAAACTTACA+AGG - chr1_2:49831356-49831375 Msa0074880:intron 35.0%
CCTGCAATGAAGAAAACTTT+AGG + chr1_2:49831510-49831529 None:intergenic 35.0%
! CCTAAAGTTTTCTTCATTGC+AGG - chr1_2:49831507-49831526 Msa0074880:intron 35.0%
! AAAGTTTTCTTCATTGCAGG+TGG - chr1_2:49831510-49831529 Msa0074880:intron 35.0%
! AATCATTCAACAAGAGCACA+AGG + chr1_2:49831568-49831587 None:intergenic 35.0%
! TATCGCGATAATTTGTCTCA+CGG - chr1_2:49831763-49831782 Msa0074880:CDS 35.0%
CAGCCATAAGAGGATTTAAA+TGG + chr1_2:49831800-49831819 None:intergenic 35.0%
CATTTAAATCCTCTTATGGC+TGG - chr1_2:49831798-49831817 Msa0074880:CDS 35.0%
GAAACAAAAGGAGAAGACAA+AGG + chr1_2:49831993-49832012 None:intergenic 35.0%
GGATGAGAGTAATATTGACA+AGG + chr1_2:49832118-49832137 None:intergenic 35.0%
TTGCAATTTGTCGCATATGT+TGG - chr1_2:49832157-49832176 Msa0074880:CDS 35.0%
CCTCAAACCACAGATTTATT+AGG + chr1_2:49832232-49832251 None:intergenic 35.0%
CCTAATAAATCTGTGGTTTG+AGG - chr1_2:49832229-49832248 Msa0074880:CDS 35.0%
TTCTTACAGTGTTAATTCCC+AGG + chr1_2:49832334-49832353 None:intergenic 35.0%
GTTCATCAATTTCATTTGCC+TGG + chr1_2:49832383-49832402 None:intergenic 35.0%
! GTTACATCGTGACAAGTTTT+AGG - chr1_2:49832424-49832443 Msa0074880:intron 35.0%
AATAATGGTCGAACGAAGGA+AGG + chr1_2:49828463-49828482 None:intergenic 40.0%
! TGGTTTTTGTTGAAGTAGCG+AGG + chr1_2:49828571-49828590 None:intergenic 40.0%
!! GATGCATTGGTGATGATGAT+GGG + chr1_2:49828667-49828686 None:intergenic 40.0%
!! TGATGCATTGGTGATGATGA+TGG + chr1_2:49828668-49828687 None:intergenic 40.0%
AGGAGATGAAGAAGAAGACA+TGG + chr1_2:49828719-49828738 None:intergenic 40.0%
GAAAGAAGGAGAAGAAGAAG+AGG + chr1_2:49828746-49828765 None:intergenic 40.0%
! AGTACCGAGTTTCTTGAACA+AGG + chr1_2:49828866-49828885 None:intergenic 40.0%
TCGTCCAATTCAATGACCAA+TGG + chr1_2:49828892-49828911 None:intergenic 40.0%
GGTCATTGAATTGGACGAAT+TGG - chr1_2:49828894-49828913 Msa0074880:intron 40.0%
GCAATGGCAAGCAATAATTG+AGG + chr1_2:49828943-49828962 None:intergenic 40.0%
! AGACATTTGGGACAGTGTAT+TGG + chr1_2:49829061-49829080 None:intergenic 40.0%
TTGACGTGACAACACATCAT+TGG - chr1_2:49829190-49829209 Msa0074880:intron 40.0%
! ATCCAAACAAGGTGTTCCTT+GGG + chr1_2:49829326-49829345 None:intergenic 40.0%
! TATCCAAACAAGGTGTTCCT+TGG + chr1_2:49829327-49829346 None:intergenic 40.0%
! AAGTAGTACTTCTGGGTTGA+AGG - chr1_2:49829691-49829710 Msa0074880:intron 40.0%
TTTGTGCCAGAAAAGTGAGA+GGG - chr1_2:49829766-49829785 Msa0074880:intron 40.0%
AACTCTCTTGAAACAACCAC+GGG - chr1_2:49829917-49829936 Msa0074880:intron 40.0%
!! TCCCAATGAGTTTGTTAAGG+AGG - chr1_2:49829942-49829961 Msa0074880:intron 40.0%
! TTGGTGACTTTGAGAACGAT+TGG - chr1_2:49829978-49829997 Msa0074880:intron 40.0%
! TGGTGACTTTGAGAACGATT+GGG - chr1_2:49829979-49829998 Msa0074880:intron 40.0%
! TCCTCAATGGCTTTTCCTTA+GGG + chr1_2:49830106-49830125 None:intergenic 40.0%
AAACTCTTGGAGGATACTTG+GGG + chr1_2:49830140-49830159 None:intergenic 40.0%
CAAACTCTTGGAGGATACTT+GGG + chr1_2:49830141-49830160 None:intergenic 40.0%
TCAAACTCTTGGAGGATACT+TGG + chr1_2:49830142-49830161 None:intergenic 40.0%
CACTTGTATCAAACTCTTGG+AGG + chr1_2:49830150-49830169 None:intergenic 40.0%
TGCTAGATGAACTTCTCCTT+TGG + chr1_2:49830203-49830222 None:intergenic 40.0%
AAATTAGGTGGCAATGGCAA+TGG + chr1_2:49830249-49830268 None:intergenic 40.0%
CATTGGAAATTAGGTGGCAA+TGG + chr1_2:49830255-49830274 None:intergenic 40.0%
CGATCTCTACTATTTGCACA+TGG - chr1_2:49830354-49830373 Msa0074880:intron 40.0%
CTACGTGTTGAAGAAGACAA+CGG - chr1_2:49830779-49830798 Msa0074880:intron 40.0%
TACGTGTTGAAGAAGACAAC+GGG - chr1_2:49830780-49830799 Msa0074880:intron 40.0%
AGGGACTAAACTTACAAGGT+CGG + chr1_2:49831360-49831379 None:intergenic 40.0%
GAATAATGCTTCAGTCACTG+AGG + chr1_2:49831644-49831663 None:intergenic 40.0%
ATGCATGTATGACGCTTTCA+TGG - chr1_2:49831868-49831887 Msa0074880:CDS 40.0%
TTTATGGAACTGTGCAACGT+TGG + chr1_2:49831951-49831970 None:intergenic 40.0%
CAGATACACTTAAGCTGTAC+AGG - chr1_2:49832033-49832052 Msa0074880:CDS 40.0%
ACACTTAAGCTGTACAGGAA+AGG - chr1_2:49832038-49832057 Msa0074880:CDS 40.0%
CTTCTGATAGCAGAGTTTCA+AGG + chr1_2:49832067-49832086 None:intergenic 40.0%
ATCCTAAAGGGAATCTGATC+CGG - chr1_2:49832134-49832153 Msa0074880:CDS 40.0%
CATATGCGACAAATTGCAAC+CGG + chr1_2:49832156-49832175 None:intergenic 40.0%
GAAGAGGCTCATAAAACAGA+AGG + chr1_2:49832453-49832472 None:intergenic 40.0%
ATGGGTGAAGGAGTGGAAAT+GGG + chr1_2:49828649-49828668 None:intergenic 45.0%
!! TTGGTGATGATGATGGGTGA+AGG + chr1_2:49828661-49828680 None:intergenic 45.0%
AAGAAGAAGACATGGCTCGA+GGG + chr1_2:49828711-49828730 None:intergenic 45.0%
GAAACTCGGTACTCAACCAT+TGG - chr1_2:49828873-49828892 Msa0074880:intron 45.0%
TTCTGCAATTGTGGACCTTG+TGG + chr1_2:49829017-49829036 None:intergenic 45.0%
AACCCAAGGAACACCTTGTT+TGG - chr1_2:49829321-49829340 Msa0074880:intron 45.0%
CAGACTTCTGTGATTGAGAG+TGG - chr1_2:49829618-49829637 Msa0074880:intron 45.0%
CTGGCACAAACACAGATTCT+TGG + chr1_2:49829756-49829775 None:intergenic 45.0%
GTTTGTGCCAGAAAAGTGAG+AGG - chr1_2:49829765-49829784 Msa0074880:intron 45.0%
!! TTCTCTCCCTCTCACTTTTC+TGG + chr1_2:49829775-49829794 None:intergenic 45.0%
ACCCTAAGGAAAAGCCATTG+AGG - chr1_2:49830102-49830121 Msa0074880:intron 45.0%
! CTCCTCAATGGCTTTTCCTT+AGG + chr1_2:49830107-49830126 None:intergenic 45.0%
GGCTCAAAATGTCTCCTCAA+TGG + chr1_2:49830119-49830138 None:intergenic 45.0%
AATGAAGAGGGATTCACCCT+GGG + chr1_2:49830302-49830321 None:intergenic 45.0%
AAATGAAGAGGGATTCACCC+TGG + chr1_2:49830303-49830322 None:intergenic 45.0%
! CTATTTGCACATGGGTTGTG+AGG - chr1_2:49830363-49830382 Msa0074880:intron 45.0%
TCTTCCCATGCCTTGAACTA+TGG - chr1_2:49830567-49830586 Msa0074880:intron 45.0%
! CACCGGTTAACATACTGGTT+GGG - chr1_2:49830756-49830775 Msa0074880:intron 45.0%
AGCCCAACCAGTATGTTAAC+CGG + chr1_2:49830761-49830780 None:intergenic 45.0%
ACGTGTTGAAGAAGACAACG+GGG - chr1_2:49830781-49830800 Msa0074880:intron 45.0%
AAGACAACGGGGTTCAAAAC+CGG - chr1_2:49830792-49830811 Msa0074880:intron 45.0%
! GCATGTTTTCCAGCCATAAG+AGG + chr1_2:49831810-49831829 None:intergenic 45.0%
AACCGGATCAGATTCCCTTT+AGG + chr1_2:49832139-49832158 None:intergenic 45.0%
!!! TATAGTAAATTTTTTTTATA+GGG + chr1_2:49830958-49830977 None:intergenic 5.0%
!!! TTATAGTAAATTTTTTTTAT+AGG + chr1_2:49830959-49830978 None:intergenic 5.0%
!!! TTATATTAGATTTTTTTTTA+GGG + chr1_2:49831415-49831434 None:intergenic 5.0%
!!! ATTATATTAGATTTTTTTTT+AGG + chr1_2:49831416-49831435 None:intergenic 5.0%
GTAGCGAGGAAGAGTGAAAG+TGG + chr1_2:49828557-49828576 None:intergenic 50.0%
TGGGTGAAGGAGTGGAAATG+GGG + chr1_2:49828648-49828667 None:intergenic 50.0%
GATGGGTGAAGGAGTGGAAA+TGG + chr1_2:49828650-49828669 None:intergenic 50.0%
!! GATGATGATGGGTGAAGGAG+TGG + chr1_2:49828656-49828675 None:intergenic 50.0%
GAAGAAGAAGACATGGCTCG+AGG + chr1_2:49828712-49828731 None:intergenic 50.0%
GGAGAAGAAGAAGAGGGAGA+AGG + chr1_2:49828739-49828758 None:intergenic 50.0%
!! CTCAGAGCAATAAGAGCACC+AGG + chr1_2:49828836-49828855 None:intergenic 50.0%
CTGGTGCTCTTATTGCTCTG+AGG - chr1_2:49828834-49828853 Msa0074880:CDS 50.0%
! GTACTTCTGGGTTGAAGGCA+TGG - chr1_2:49829696-49829715 Msa0074880:intron 50.0%
CAAACTCATTGGGAAACCCG+TGG + chr1_2:49829936-49829955 None:intergenic 50.0%
TGAGGAGACCTAGTAGCAGA+AGG - chr1_2:49830067-49830086 Msa0074880:intron 50.0%
GAGGAGACCTAGTAGCAGAA+GGG - chr1_2:49830068-49830087 Msa0074880:intron 50.0%
AGGAGACCTAGTAGCAGAAG+GGG - chr1_2:49830069-49830088 Msa0074880:intron 50.0%
TCACAACCCCTTCTGCTACT+AGG + chr1_2:49830078-49830097 None:intergenic 50.0%
TAGTAGCAGAAGGGGTTGTG+AGG - chr1_2:49830077-49830096 Msa0074880:intron 50.0%
AGTAGCAGAAGGGGTTGTGA+GGG - chr1_2:49830078-49830097 Msa0074880:intron 50.0%
GCGATTGTGAATGGTGAGTG+TGG + chr1_2:49830507-49830526 None:intergenic 50.0%
GTAATGTTAACTGGTGCCCC+CGG - chr1_2:49830602-49830621 Msa0074880:intron 50.0%
TAATGTTAACTGGTGCCCCC+GGG - chr1_2:49830603-49830622 Msa0074880:intron 50.0%
!! GCACCGGTTAACATACTGGT+TGG - chr1_2:49830755-49830774 Msa0074880:intron 50.0%
AGACAACGGGGTTCAAAACC+GGG - chr1_2:49830793-49830812 Msa0074880:intron 50.0%
ATTGCAGGTGGCCAACACAT+TGG - chr1_2:49831522-49831541 Msa0074880:intron 50.0%
CTGTACAGCCACCAATGTGT+TGG + chr1_2:49831536-49831555 None:intergenic 50.0%
! CAACACATTGGTGGCTGTAC+AGG - chr1_2:49831534-49831553 Msa0074880:intron 50.0%
GGGTGAAGGAGTGGAAATGG+GGG + chr1_2:49828647-49828666 None:intergenic 55.0%
GACATGGCTCGAGGGAAAGT+GGG + chr1_2:49828703-49828722 None:intergenic 55.0%
AGACATGGCTCGAGGGAAAG+TGG + chr1_2:49828704-49828723 None:intergenic 55.0%
TCGAGACGAGAGCCGAAAGA+AGG + chr1_2:49828760-49828779 None:intergenic 55.0%
AATGTTAACTGGTGCCCCCG+GGG - chr1_2:49830604-49830623 Msa0074880:intron 55.0%
TTGCTCCTTAACCAGTGCCC+CGG + chr1_2:49830624-49830643 None:intergenic 55.0%
AGTATGTTAACCGGTGCCCC+CGG + chr1_2:49830752-49830771 None:intergenic 55.0%
ATCTGTGGCTTGAGTGCTCC+AGG - chr1_2:49832362-49832381 Msa0074880:CDS 55.0%
! TGCGCGGCGTGATGATGCAT+TGG + chr1_2:49828680-49828699 None:intergenic 60.0%
GGGGTTGTGAGGGAACCCTA+AGG - chr1_2:49830088-49830107 Msa0074880:intron 60.0%
TGCTCCTTAACCAGTGCCCC+GGG + chr1_2:49830623-49830642 None:intergenic 60.0%
GGTTTCCTTAACCCGTGCCC+CGG - chr1_2:49830730-49830749 Msa0074880:intron 60.0%
GTTTCCTTAACCCGTGCCCC+GGG - chr1_2:49830731-49830750 Msa0074880:intron 60.0%
TTTCCTTAACCCGTGCCCCG+GGG - chr1_2:49830732-49830751 Msa0074880:intron 60.0%
TATGTTAACCGGTGCCCCCG+GGG + chr1_2:49830750-49830769 None:intergenic 60.0%
GTATGTTAACCGGTGCCCCC+GGG + chr1_2:49830751-49830770 None:intergenic 60.0%
!! GGGGGCACCGGTTAACATAC+TGG - chr1_2:49830751-49830770 Msa0074880:intron 60.0%
CGGGGTTCAAAACCGGGAGA+AGG - chr1_2:49830799-49830818 Msa0074880:intron 60.0%
GCAGGTGGCCAACACATTGG+TGG - chr1_2:49831525-49831544 Msa0074880:intron 60.0%
CTCGAGGGAAAGTGGGTGCG+CGG + chr1_2:49828696-49828715 None:intergenic 65.0%
CTCCTTAACCAGTGCCCCGG+GGG + chr1_2:49830621-49830640 None:intergenic 65.0%
GCTCCTTAACCAGTGCCCCG+GGG + chr1_2:49830622-49830641 None:intergenic 65.0%
TTCCTTAACCCGTGCCCCGG+GGG - chr1_2:49830733-49830752 Msa0074880:intron 65.0%
!! TGCCCCCGGGGCACTGGTTA+AGG - chr1_2:49830616-49830635 Msa0074880:intron 70.0%
AACTGGTGCCCCCGGGGCAC+TGG - chr1_2:49830610-49830629 Msa0074880:intron 75.0%
! TGCCCCCGGGGCACGGGTTA+AGG + chr1_2:49830738-49830757 None:intergenic 75.0%
TAACCGGTGCCCCCGGGGCA+CGG + chr1_2:49830745-49830764 None:intergenic 75.0%
!! AACCCGTGCCCCGGGGGCAC+CGG - chr1_2:49830739-49830758 Msa0074880:intron 80.0%
! AACCGGTGCCCCCGGGGCAC+GGG + chr1_2:49830744-49830763 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 49828425 49832493 49828425 ID=Msa0074880;Name=Msa0074880
chr1_2 mRNA 49828425 49832493 49828425 ID=Msa0074880-mRNA-1;Parent=Msa0074880;Name=Msa0074880-mRNA-1;_AED=0.13;_eAED=0.13;_QI=87|0.75|0.6|1|0.75|0.6|5|381|226
chr1_2 exon 49828425 49828882 49828425 ID=Msa0074880-mRNA-1:exon:15260;Parent=Msa0074880-mRNA-1
chr1_2 exon 49829363 49829428 49829363 ID=Msa0074880-mRNA-1:exon:15259;Parent=Msa0074880-mRNA-1
chr1_2 exon 49831751 49831906 49831751 ID=Msa0074880-mRNA-1:exon:15258;Parent=Msa0074880-mRNA-1
chr1_2 exon 49832002 49832405 49832002 ID=Msa0074880-mRNA-1:exon:15257;Parent=Msa0074880-mRNA-1
chr1_2 exon 49832429 49832493 49832429 ID=Msa0074880-mRNA-1:exon:15256;Parent=Msa0074880-mRNA-1
chr1_2 five_prime_UTR 49832429 49832493 49832429 ID=Msa0074880-mRNA-1:five_prime_utr;Parent=Msa0074880-mRNA-1
chr1_2 five_prime_UTR 49832384 49832405 49832384 ID=Msa0074880-mRNA-1:five_prime_utr;Parent=Msa0074880-mRNA-1
chr1_2 CDS 49832002 49832383 49832002 ID=Msa0074880-mRNA-1:cds;Parent=Msa0074880-mRNA-1
chr1_2 CDS 49831751 49831906 49831751 ID=Msa0074880-mRNA-1:cds;Parent=Msa0074880-mRNA-1
chr1_2 CDS 49829363 49829428 49829363 ID=Msa0074880-mRNA-1:cds;Parent=Msa0074880-mRNA-1
chr1_2 CDS 49828806 49828882 49828806 ID=Msa0074880-mRNA-1:cds;Parent=Msa0074880-mRNA-1
chr1_2 three_prime_UTR 49828425 49828805 49828425 ID=Msa0074880-mRNA-1:three_prime_utr;Parent=Msa0074880-mRNA-1
Gene Sequence

>Msa0074880

ATGGCTTCATCAATGGCGACCACTTTCACTCTTCCTCGCTACTTCAACAAAAACCATTCTTCTTCTTCTTCTTCTTCATCCTCTATCTCCAAAATTTTCACTTTCTACACCCCCATTTCCACTCCTTCACCCATCATCATCACCAATGCATCATCACGCCGCGCACCCACTTTCCCTCGAGCCATGTCTTCTTCTTCATCTCCTTCTCCCTCTTCTTCTTCTCCTTCTTTCGGCTCTCGTCTCGAAGAAACCATCAAAAACACCGTTTCTCAAAACCCTGTTGTTGTTTATTCTAAATCCTGGTGCTCTTATTGCTCTGAGGTCAAATCCTTGTTCAAGAAACTCGGTACTCAACCATTGGTCATTGAATTGGACGAATTGGGTCCACAAGGTCCACAATTGCAGAAGTTATTGGAAAGAATCACTGGCCAATACACTGTCCCAAATGTCTTTATTGGTAAGCAAAGCAATCACTCACCAGAGTTTAATTACTATACTGTGACAGTGCAAAATTATTTTACACATACATGCTTTGCAGAACAATTTATTTCTGACCCTAAAGTTTTCTTCATTGCAGGTGGCCAACACATTGGTGGCTGTACAGATACACTTAAGCTGTACAGGAAAGGAGACCTTGAAACTCTGCTATCAGAAGCTGTTGCTAAAAATAAGGGGAGCTAA

Protein sequence

>Msa0074880

MASSMATTFTLPRYFNKNHSSSSSSSSSISKIFTFYTPISTPSPIIITNASSRRAPTFPRAMSSSSSPSPSSSSPSFGSRLEETIKNTVSQNPVVVYSKSWCSYCSEVKSLFKKLGTQPLVIELDELGPQGPQLQKLLERITGQYTVPNVFIGKQSNHSPEFNYYTVTVQNYFTHTCFAEQFISDPKVFFIAGGQHIGGCTDTLKLYRKGDLETLLSEAVAKNKGS*