AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0480090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0480090 MtrunA17_Chr3g0140521 96.212 396 8 1 1 389 1 396 0.0 793
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0480090 AT2G25840.1 68.392 367 99 3 32 389 48 406 3.34e-180 507
Msa0480090 AT2G25840.2 69.272 371 93 4 32 389 48 410 1.19e-179 506
Msa0480090 AT2G25840.3 66.485 367 94 4 32 389 48 394 2.96e-170 481
Msa0480090 AT2G25840.4 69.527 338 86 3 32 360 48 377 6.25e-164 465

Find 136 sgRNAs with CRISPR-Local

Find 766 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGGTGAAATCTTTATCAATT+TGG 0.219116 3_3:-85272755 None:intergenic
CAAGAATTGGGTTGCCCTTC+AGG 0.223058 3_3:+85260832 Msa0480090:CDS
ATTCATCATCTGCCTCATTT+TGG 0.225960 3_3:+85272535 Msa0480090:three_prime_UTR
ATATAATTACTTACATCTTT+AGG 0.251940 3_3:-85265836 None:intergenic
TTATTACATTCAGGCCTTTC+AGG 0.255757 3_3:-85267696 None:intergenic
GGTTATTTAGATAAAGTATT+AGG 0.263586 3_3:+85272357 Msa0480090:CDS
TCTATATACCAGCTCGCTTC+TGG 0.268429 3_3:+85267726 Msa0480090:CDS
AGGATCAAGAATATTGATTC+TGG 0.275889 3_3:-85265816 None:intergenic
GTGCTCCAGTTGGAGGTATA+AGG 0.284117 3_3:-85264673 None:intergenic
TGACCATTTGCAACCCATTC+AGG 0.298866 3_3:+85268720 Msa0480090:CDS
CACCCCACATGCCAGGTAAA+TGG 0.299294 3_3:-85262095 None:intergenic
ACTTCGGTGCCATCAAGAAT+TGG 0.323313 3_3:+85260819 Msa0480090:CDS
ATGAATGCCAAAACATGAAC+TGG 0.328520 3_3:+85268662 Msa0480090:CDS
GAGCGGGTTAATAATTTATA+CGG 0.346341 3_3:+85264402 Msa0480090:CDS
TTCTGATATACTTCTATATC+AGG 0.347370 3_3:+85264083 Msa0480090:CDS
TTTAGGGAGATGATGAAGTT+GGG 0.352166 3_3:+85264028 Msa0480090:intron
GAGGAACTCATGTCAGATTC+AGG 0.363427 3_3:+85272336 Msa0480090:CDS
TGAAGATCAAAAGCAACATT+TGG 0.366304 3_3:+85264359 Msa0480090:CDS
GAGAGAAGATTATTACATTC+AGG 0.367486 3_3:-85267705 None:intergenic
GGAAGAAAGTGGAAGAAATT+AGG 0.367772 3_3:+85264426 Msa0480090:CDS
TGACTCACAACAATTATCTA+AGG 0.375984 3_3:+85262054 Msa0480090:CDS
AAAAGTTAGCTTTAATTAAG+TGG 0.379661 3_3:-85272507 None:intergenic
ATGTGCCCCAGTTCATGTTT+TGG 0.386175 3_3:-85268669 None:intergenic
TTTAATATTTGGAACCTGAA+TGG 0.387697 3_3:-85268734 None:intergenic
CCTTCGACAGGCCATCGGTT+AGG 0.400959 3_3:-85264706 None:intergenic
ATTACAGTACAAATAAATAA+TGG 0.401670 3_3:-85272725 None:intergenic
TTTGATAGTCATCTTAAGTT+GGG 0.406454 3_3:+85272783 Msa0480090:three_prime_UTR
TTAATATTTGGAACCTGAAT+GGG 0.412013 3_3:-85268733 None:intergenic
TGCTCCAGTTGGAGGTATAA+GGG 0.412909 3_3:-85264672 None:intergenic
TGAATTACTTTACAGAGGTC+GGG 0.423660 3_3:-85260663 None:intergenic
ATCAGGAATACACAACCTTT+AGG 0.432999 3_3:-85272616 None:intergenic
ACCACGAGTCGACGATAGAC+GGG 0.435273 3_3:+85260409 Msa0480090:five_prime_UTR
TTTGACTTATCCTGTTCTGA+TGG 0.435313 3_3:+85264059 Msa0480090:CDS
CATAATGTTTACCAAGCAAT+GGG 0.438343 3_3:+85272423 Msa0480090:CDS
CTTCGACAGGCCATCGGTTA+GGG 0.441098 3_3:-85264705 None:intergenic
ATTTGATAGTCATCTTAAGT+TGG 0.444956 3_3:+85272782 Msa0480090:three_prime_UTR
TGTGCTCCCTTTGGATATAC+CGG 0.450414 3_3:-85260367 None:intergenic
CTTCGGTGCCATCAAGAATT+GGG 0.452924 3_3:+85260820 Msa0480090:CDS
CACTCTGTATCGTTAGCAAC+CGG 0.454059 3_3:+85260348 None:intergenic
ATATCAGAAGCCATCAGAAC+AGG 0.454330 3_3:-85264069 None:intergenic
AAAATCGAGCTTATTGCATC+AGG 0.456324 3_3:-85272633 None:intergenic
AAGGGCAACCCAATTCTTGA+TGG 0.459066 3_3:-85260828 None:intergenic
CTAAGTTCTGTAACACCAAT+CGG 0.472134 3_3:+85262288 Msa0480090:CDS
GTTTCCAAGGTGAATTGAAC+CGG 0.473912 3_3:-85260795 None:intergenic
TGCAGGAAACGAGTTGTCTC+CGG 0.476909 3_3:+85260761 Msa0480090:intron
ATCAAGGCATCTGTTAAAAG+AGG 0.477251 3_3:-85268697 None:intergenic
TCTTTAACAGGTTCGCTATG+AGG 0.480999 3_3:+85272317 Msa0480090:intron
GACATAATCCGTGCTCCAGT+TGG 0.481297 3_3:-85264683 None:intergenic
AAAGTGTAAAGAACCTTTGA+AGG 0.481470 3_3:-85262121 None:intergenic
GAGGACTGCATTGATGCTAA+TGG 0.481492 3_3:+85272859 Msa0480090:three_prime_UTR
CATGTGCACGGACATGAGAC+TGG 0.494374 3_3:-85262248 None:intergenic
TCATAATGTTTACCAAGCAA+TGG 0.495097 3_3:+85272422 Msa0480090:CDS
GAGCCCCTTATACCTCCAAC+TGG 0.497992 3_3:+85264668 Msa0480090:intron
TTAGGGAGATGATGAAGTTG+GGG 0.498336 3_3:+85264029 Msa0480090:intron
CAGCCATTTACCTGGCATGT+GGG 0.499723 3_3:+85262092 Msa0480090:CDS
AAACATATAAGCTATAAGAT+TGG 0.500443 3_3:+85272476 Msa0480090:three_prime_UTR
GTGAATTACTTTACAGAGGT+CGG 0.500582 3_3:-85260664 None:intergenic
TTAGATAAAGTATTAGGAGA+AGG 0.502751 3_3:+85272363 Msa0480090:CDS
GGGAGTCTGTGGAGAGGTAT+CGG 0.509087 3_3:-85260632 None:intergenic
TCCTCGAAAATCCCATTGCT+TGG 0.509933 3_3:-85272434 None:intergenic
CACCACGAGTCGACGATAGA+CGG 0.515077 3_3:+85260408 Msa0480090:five_prime_UTR
ACAGAGGTCGGGGAAGGAGT+GGG 0.518890 3_3:-85260652 None:intergenic
ATTTATACGGAGGAAGAAAG+TGG 0.524891 3_3:+85264415 Msa0480090:CDS
ATGTGGGGTGGATCCTTCAA+AGG 0.528124 3_3:+85262108 Msa0480090:CDS
TACAGAGGTCGGGGAAGGAG+TGG 0.529375 3_3:-85260653 None:intergenic
GACCCGTGACTTAGCTGAGC+GGG 0.529424 3_3:+85264386 Msa0480090:CDS
GTCAACCGCAGCCATTTACC+TGG 0.531223 3_3:+85262084 Msa0480090:CDS
TTGATTCTGGATTGATCAGA+AGG 0.532664 3_3:-85265803 None:intergenic
CGATACACTTTACTTCATTG+TGG 0.534595 3_3:+85261321 Msa0480090:CDS
TTATTTGACGCAAAGCCTAA+AGG 0.534731 3_3:+85272601 Msa0480090:three_prime_UTR
AAGGATCCACCCCACATGCC+AGG 0.536997 3_3:-85262102 None:intergenic
GAACCTGAATGGGTTGCAAA+TGG 0.538075 3_3:-85268723 None:intergenic
GCAAAACTGATTCATTTCCA+AGG 0.538524 3_3:+85267529 Msa0480090:CDS
TACTTTACAGAGGTCGGGGA+AGG 0.539422 3_3:-85260658 None:intergenic
GTCTCCGGAGTTCAACCTAC+CGG 0.543876 3_3:+85260776 Msa0480090:CDS
GGGGAAGGAGTGGGAGTCTG+TGG 0.546228 3_3:-85260643 None:intergenic
GTATAGTTGACTGCTGGAAG+TGG 0.549181 3_3:+85272573 Msa0480090:three_prime_UTR
TTAAAGAGAAATCTCGCAAG+GGG 0.560100 3_3:+85262334 Msa0480090:CDS
CATTTACCTGGCATGTGGGG+TGG 0.560694 3_3:+85262096 Msa0480090:CDS
GGGCATGTATAGTTGACTGC+TGG 0.562086 3_3:+85272567 Msa0480090:three_prime_UTR
GGGTTGCAAATGGTCAATCA+AGG 0.563217 3_3:-85268713 None:intergenic
ATTCACCTTGGAAACTACTT+CGG 0.563842 3_3:+85260803 Msa0480090:CDS
ATAATCCGTGCTCCAGTTGG+AGG 0.567908 3_3:-85264680 None:intergenic
CCCATGATTACTCCAAAATG+AGG 0.568087 3_3:-85272547 None:intergenic
ATCAAACTCAAAGATTTGCA+CGG 0.576420 3_3:+85272906 Msa0480090:three_prime_UTR
GAATTACTTTACAGAGGTCG+GGG 0.580007 3_3:-85260662 None:intergenic
TGAATGCCAAAACATGAACT+GGG 0.584044 3_3:+85268663 Msa0480090:CDS
ATAGACGGGGAAGAGTAAGA+TGG 0.584540 3_3:+85260423 Msa0480090:exon
CCTAACCGATGGCCTGTCGA+AGG 0.585232 3_3:+85264706 Msa0480090:CDS
TAGCAACCGGTATATCCAAA+GGG 0.585545 3_3:+85260361 Msa0480090:five_prime_UTR
GCAGCCATTTACCTGGCATG+TGG 0.585942 3_3:+85262091 Msa0480090:CDS
ACATGCCAGGTAAATGGCTG+CGG 0.588746 3_3:-85262089 None:intergenic
GAAAGTGGAAGAAATTAGGC+GGG 0.590519 3_3:+85264430 Msa0480090:CDS
CCAAGGTGAATTGAACCGGT+AGG 0.593608 3_3:-85260791 None:intergenic
AGCCATTTACCTGGCATGTG+GGG 0.594275 3_3:+85262093 Msa0480090:CDS
CTTCATTGTGGATCTGCATG+CGG 0.594642 3_3:+85261333 Msa0480090:CDS
GTTCTGTAACACCAATCGGC+TGG 0.595560 3_3:+85262292 Msa0480090:CDS
AACCCGCTCAGCTAAGTCAC+GGG 0.596314 3_3:-85264388 None:intergenic
TGAGCGAGTGAGTACAGCGA+TGG 0.596541 3_3:-85260481 None:intergenic
ATTCTGTTTAGCCAGCCGAT+TGG 0.597972 3_3:-85262303 None:intergenic
AGTGGTGCAGCATCGAATGG+TGG 0.600717 3_3:-85260605 None:intergenic
GTTTAAAGAGAAATCTCGCA+AGG 0.604667 3_3:+85262332 Msa0480090:CDS
TAGAGTGGTGCAGCATCGAA+TGG 0.604960 3_3:-85260608 None:intergenic
TAGACGGGGAAGAGTAAGAT+GGG 0.605221 3_3:+85260424 Msa0480090:exon
AGGAGTGGGAGTCTGTGGAG+AGG 0.605509 3_3:-85260638 None:intergenic
TGGCACCGAAGTAGTTTCCA+AGG 0.610352 3_3:-85260808 None:intergenic
GTGGTGCAGCATCGAATGGT+GGG 0.610479 3_3:-85260604 None:intergenic
TGGAAATCGACAATCCTGAA+AGG 0.612101 3_3:+85267682 Msa0480090:CDS
CCTACCGGTTCAATTCACCT+TGG 0.612153 3_3:+85260791 Msa0480090:CDS
GCTCCAGTTGGAGGTATAAG+GGG 0.612995 3_3:-85264671 None:intergenic
TAACCCGCTCAGCTAAGTCA+CGG 0.613562 3_3:-85264389 None:intergenic
TTAGCAACCGGTATATCCAA+AGG 0.615786 3_3:+85260360 Msa0480090:five_prime_UTR
TCCATTTATGACAGGCGAGG+AGG 0.617031 3_3:+85264537 Msa0480090:intron
CGGATTATGTCCCTAACCGA+TGG 0.620445 3_3:+85264695 Msa0480090:CDS
CGGGTTAATAATTTATACGG+AGG 0.621370 3_3:+85264405 Msa0480090:CDS
GATAATTGTTGTGAGTCATG+AGG 0.622880 3_3:-85262049 None:intergenic
TTATACCTCCAACTGGAGCA+CGG 0.623233 3_3:+85264675 Msa0480090:CDS
TTTAAAGAGAAATCTCGCAA+GGG 0.626850 3_3:+85262333 Msa0480090:CDS
GATGGGTGTTTGTCATTACG+CGG 0.627298 3_3:+85260441 Msa0480090:exon
TAAAACAAGCATAACCTGAA+GGG 0.629037 3_3:-85260846 None:intergenic
TGGAGAGGTATCGGATAGAG+TGG 0.629202 3_3:-85260623 None:intergenic
AGAAAGTGGAAGAAATTAGG+CGG 0.631034 3_3:+85264429 Msa0480090:CDS
CCCCGTCTATCGTCGACTCG+TGG 0.634096 3_3:-85260410 None:intergenic
GAGCGAGTGAGTACAGCGAT+GGG 0.638013 3_3:-85260480 None:intergenic
ACAGTACAAATAAATAATGG+AGG 0.642396 3_3:-85272722 None:intergenic
TGCTGTGAATTACTTTACAG+AGG 0.644052 3_3:-85260668 None:intergenic
ACATCAATTCTACATGTGCA+CGG 0.655753 3_3:-85262260 None:intergenic
AGCGATGGGACGAAGCATGA+CGG 0.662841 3_3:-85260466 None:intergenic
TGAACCGGTAGGTTGAACTC+CGG 0.671389 3_3:-85260780 None:intergenic
GTGCACATGTAGAATTGATG+TGG 0.674613 3_3:+85262262 Msa0480090:CDS
CCACGAGTCGACGATAGACG+GGG 0.689622 3_3:+85260410 Msa0480090:five_prime_UTR
AAGATGACTATCAAATACAG+TGG 0.703388 3_3:-85272775 None:intergenic
GAATGCCAAAACATGAACTG+GGG 0.703767 3_3:+85268664 Msa0480090:CDS
TGTTTATGAGAGAAAGACAG+AGG 0.713962 3_3:+85272840 Msa0480090:three_prime_UTR
TAAAGAGAAATCTCGCAAGG+GGG 0.735812 3_3:+85262335 Msa0480090:CDS
TGACCCGTGACTTAGCTGAG+CGG 0.744321 3_3:+85264385 Msa0480090:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTAAAAAAATATTATAAA+AGG + chr3_3:85269162-85269181 Msa0480090:intron 0.0%
!! TAAGTAATTATTAATGTATA+AGG - chr3_3:85261077-85261096 None:intergenic 10.0%
!! TAAAGAAATAATATTTATAG+TGG + chr3_3:85262157-85262176 Msa0480090:intron 10.0%
!!! TTTAGTTATATACATTTTTT+AGG + chr3_3:85262568-85262587 Msa0480090:intron 10.0%
!!! AAATTTCAATTTTTAGAAAA+AGG + chr3_3:85263019-85263038 Msa0480090:intron 10.0%
!!! AATTTCAATTTTTAGAAAAA+GGG + chr3_3:85263020-85263039 Msa0480090:intron 10.0%
!! AGAAAAAATTGTTAATAATA+TGG - chr3_3:85263206-85263225 None:intergenic 10.0%
!!! TTTTATGAAATTTTGATTAA+GGG - chr3_3:85263464-85263483 None:intergenic 10.0%
!!! TTTTTATGAAATTTTGATTA+AGG - chr3_3:85263465-85263484 None:intergenic 10.0%
!!! TTTTTATATTTATTCATGAA+AGG - chr3_3:85265184-85265203 None:intergenic 10.0%
!!! ATAAATATTTTAAAATTTGG+TGG + chr3_3:85267616-85267635 Msa0480090:intron 10.0%
!! ATATTTAAATTTAAATGGAA+AGG - chr3_3:85268004-85268023 None:intergenic 10.0%
!! CAAGTTTAATATTTAATATT+TGG - chr3_3:85268748-85268767 None:intergenic 10.0%
!!! TGAAAATATTAGTTTATTTT+TGG + chr3_3:85268903-85268922 Msa0480090:intron 10.0%
!!! CTTTTTTATAATAATCAATA+AGG + chr3_3:85271902-85271921 Msa0480090:intron 10.0%
!!! TTTTTATAATAATCAATAAG+GGG + chr3_3:85271904-85271923 Msa0480090:intron 10.0%
!!! ACAAACTATAGATTTTTTTA+AGG + chr3_3:85261839-85261858 Msa0480090:intron 15.0%
!!! CAAACTATAGATTTTTTTAA+GGG + chr3_3:85261840-85261859 Msa0480090:intron 15.0%
!! AAAGAACAAAAACAAAATTT+AGG - chr3_3:85262442-85262461 None:intergenic 15.0%
!!! TATATACATTTTTTAGGAAT+AGG + chr3_3:85262574-85262593 Msa0480090:intron 15.0%
!! TTTCTATAATAAATTGTTGT+TGG + chr3_3:85262848-85262867 Msa0480090:intron 15.0%
!!! AAAAAATAATCTGATTAGTT+TGG + chr3_3:85262927-85262946 Msa0480090:intron 15.0%
!! AAGGAAAAATTGTTAATATA+TGG - chr3_3:85263243-85263262 None:intergenic 15.0%
!! ATCCTTATTAATTAAGTTTA+AGG + chr3_3:85263351-85263370 Msa0480090:intron 15.0%
!! TCCTTATTAATTAAGTTTAA+GGG + chr3_3:85263352-85263371 Msa0480090:intron 15.0%
!! TAAAGTTTGAAAATTATGAA+CGG - chr3_3:85263492-85263511 None:intergenic 15.0%
!!! TGATTTTATCAAATTATTGT+CGG + chr3_3:85263759-85263778 Msa0480090:intron 15.0%
!! AAACTTATGTTTAGATATTT+AGG + chr3_3:85263886-85263905 Msa0480090:intron 15.0%
!!! ACTTTTATAAATTATTAGTC+CGG + chr3_3:85263927-85263946 Msa0480090:intron 15.0%
!!! TTCATTTTTAGATTTATGTT+AGG + chr3_3:85264494-85264513 Msa0480090:intron 15.0%
!!! TAATGTATCTATTTTATGTA+TGG - chr3_3:85265034-85265053 None:intergenic 15.0%
!!! CAAAATTTTCAATGAAAAAT+TGG - chr3_3:85265321-85265340 None:intergenic 15.0%
!! AATAACATAAAAAATTGTGA+AGG + chr3_3:85265515-85265534 Msa0480090:intron 15.0%
!! ATATAATTACTTACATCTTT+AGG - chr3_3:85265839-85265858 None:intergenic 15.0%
!!! GGTTACATTAATTTTATTAT+TGG + chr3_3:85267236-85267255 Msa0480090:intron 15.0%
!! TTAAACAACTTTAAATGAAA+AGG - chr3_3:85267785-85267804 None:intergenic 15.0%
!! GGAAGTTAAAAAAAATTAAT+TGG - chr3_3:85268399-85268418 None:intergenic 15.0%
!!! TAATTGATAATTATTCTTGA+TGG - chr3_3:85270154-85270173 None:intergenic 15.0%
!!! TTTTATAATAATCAATAAGG+GGG + chr3_3:85271905-85271924 Msa0480090:intron 15.0%
!! ATTACAGTACAAATAAATAA+TGG - chr3_3:85272728-85272747 None:intergenic 15.0%
!! ATTATGTAATAACAACAAAC+AGG + chr3_3:85260542-85260561 Msa0480090:intron 20.0%
!!! GATATTTTTTTGTTGTTTAC+AGG + chr3_3:85261389-85261408 Msa0480090:intron 20.0%
!!! AATTTTTAGAAAAAGGGAAA+GGG + chr3_3:85263026-85263045 Msa0480090:intron 20.0%
!!! GAAACAACTTTTACTATTAT+AGG + chr3_3:85263146-85263165 Msa0480090:intron 20.0%
!!! CTTTTACTATTATAGGTTAT+AGG + chr3_3:85263153-85263172 Msa0480090:intron 20.0%
!!! TTTTAATGAAAGTTGTTACA+AGG - chr3_3:85263262-85263281 None:intergenic 20.0%
!! ACCCTTAAACTTAATTAATA+AGG - chr3_3:85263356-85263375 None:intergenic 20.0%
!! CTTTAACATAATAAAAAGAG+CGG + chr3_3:85263507-85263526 Msa0480090:intron 20.0%
!!! AAAGAAGATTTCATTTTGAA+TGG + chr3_3:85263573-85263592 Msa0480090:intron 20.0%
!! GATAAAATCACATAATTCAA+TGG - chr3_3:85263749-85263768 None:intergenic 20.0%
!!! CTTTTATAAATTATTAGTCC+GGG + chr3_3:85263928-85263947 Msa0480090:intron 20.0%
!! GACAAGATAAGAAAAAAAAA+AGG - chr3_3:85263954-85263973 None:intergenic 20.0%
!!! TTTTTCTTATCTTGTCATAT+TGG + chr3_3:85263958-85263977 Msa0480090:intron 20.0%
!!! ATCCAAATAACTTATTCTTT+TGG + chr3_3:85263997-85264016 Msa0480090:intron 20.0%
!! TTCCAAAAGAATAAGTTATT+TGG - chr3_3:85264002-85264021 None:intergenic 20.0%
!!! ATAACTTATTCTTTTGGAAT+TGG + chr3_3:85264003-85264022 Msa0480090:intron 20.0%
!! TCTATTACATAATAAATCAG+GGG - chr3_3:85264172-85264191 None:intergenic 20.0%
!! GTCTATTACATAATAAATCA+GGG - chr3_3:85264173-85264192 None:intergenic 20.0%
!! AGTCTATTACATAATAAATC+AGG - chr3_3:85264174-85264193 None:intergenic 20.0%
!! TAAATGGACAAAATAAAGAA+TGG - chr3_3:85264525-85264544 None:intergenic 20.0%
!!! TTTTTTCTAACAGAGTTTTA+TGG + chr3_3:85264632-85264651 Msa0480090:intron 20.0%
!!! TTTTTCTAACAGAGTTTTAT+GGG + chr3_3:85264633-85264652 Msa0480090:intron 20.0%
!! GTATATACAAAAGATATTTC+AGG + chr3_3:85265003-85265022 Msa0480090:intron 20.0%
!! ATCAAACTCTAATTTAATGA+AGG + chr3_3:85265479-85265498 Msa0480090:intron 20.0%
!! TCAAACTCTAATTTAATGAA+GGG + chr3_3:85265480-85265499 Msa0480090:intron 20.0%
!!! TAATTTAATGAAGGGTATTA+TGG + chr3_3:85265488-85265507 Msa0480090:intron 20.0%
!!! AATTTAATGAAGGGTATTAT+GGG + chr3_3:85265489-85265508 Msa0480090:intron 20.0%
!!! ATGTCTTTTTTGCTTATAAT+AGG + chr3_3:85265575-85265594 Msa0480090:intron 20.0%
!!! TGTCTTTTTTGCTTATAATA+GGG + chr3_3:85265576-85265595 Msa0480090:intron 20.0%
!! ATATATGTGAAAATGACAAA+AGG + chr3_3:85265615-85265634 Msa0480090:intron 20.0%
!!! TAAATCCAAATTCCTTTTAA+TGG - chr3_3:85266503-85266522 None:intergenic 20.0%
!!! AATCAATTTTTATGAATTGC+AGG + chr3_3:85266587-85266606 Msa0480090:intron 20.0%
!!! TAATTTTATTATTGGACACT+TGG + chr3_3:85267244-85267263 Msa0480090:intron 20.0%
!!! AATTTTATTATTGGACACTT+GGG + chr3_3:85267245-85267264 Msa0480090:intron 20.0%
!! ATATCTGTTACGATAATAAA+GGG - chr3_3:85268313-85268332 None:intergenic 20.0%
!! CTATTTCAAAAATTAATGCT+CGG - chr3_3:85268455-85268474 None:intergenic 20.0%
!! GGTTATCAAATAAAATATCT+CGG - chr3_3:85268618-85268637 None:intergenic 20.0%
!! CACATATTTACAAGTTTATT+TGG + chr3_3:85268768-85268787 Msa0480090:intron 20.0%
!!! GAACATTTTTCATTTTTTGT+TGG - chr3_3:85269201-85269220 None:intergenic 20.0%
!! TGTTAAAATATTCAGCAAAT+AGG + chr3_3:85269748-85269767 Msa0480090:intron 20.0%
!! ATTTGATTATCTAACAATGT+CGG + chr3_3:85270061-85270080 Msa0480090:intron 20.0%
!! AAACTTTGATTAAAAGTTGA+AGG - chr3_3:85270760-85270779 None:intergenic 20.0%
!!! GGTTATTTAGATAAAGTATT+AGG + chr3_3:85272357-85272376 Msa0480090:CDS 20.0%
!! AAACATATAAGCTATAAGAT+TGG + chr3_3:85272476-85272495 Msa0480090:three_prime_UTR 20.0%
!!! AAAAGTTAGCTTTAATTAAG+TGG - chr3_3:85272510-85272529 None:intergenic 20.0%
!!! AGTTTTACTTTACTTGTTTT+CGG + chr3_3:85272696-85272715 Msa0480090:three_prime_UTR 20.0%
!! ATAAAATATCCGATCAAAAA+AGG - chr3_3:85272888-85272907 None:intergenic 20.0%
! CTTAGTTATTAAGCTGTTTA+TGG + chr3_3:85261123-85261142 Msa0480090:intron 25.0%
!! CGGTTTGCTTATATTATATA+TGG + chr3_3:85261198-85261217 Msa0480090:intron 25.0%
!! ACTCATATAACTAGATCTTT+TGG + chr3_3:85261417-85261436 Msa0480090:intron 25.0%
! ATTAGAATGTGGAAAGTTAA+TGG + chr3_3:85261445-85261464 Msa0480090:intron 25.0%
! TTAATCCCATAAATAGTGAA+CGG - chr3_3:85261562-85261581 None:intergenic 25.0%
! ATTTATGGGATTAATGTAGT+CGG + chr3_3:85261568-85261587 Msa0480090:intron 25.0%
! CATTGAAATTGACAAAAATG+TGG - chr3_3:85261705-85261724 None:intergenic 25.0%
! TCATTCAATGACTAAAAAAC+AGG - chr3_3:85261980-85261999 None:intergenic 25.0%
! TAAATATCATTTATCCGCAA+TGG - chr3_3:85262201-85262220 None:intergenic 25.0%
!!! TGATATTTATTTCTGCAAAC+AGG + chr3_3:85262212-85262231 Msa0480090:intron 25.0%
!! GAAGGAAATTTATTGTTTCT+AGG - chr3_3:85262468-85262487 None:intergenic 25.0%
!!! AAAACCATCTTACTTTTAGA+AGG - chr3_3:85262501-85262520 None:intergenic 25.0%
! TTGTTCATAAAATTATGTGC+AGG - chr3_3:85262694-85262713 None:intergenic 25.0%
!! CATTTATATAGTCTTACGTT+TGG + chr3_3:85262975-85262994 Msa0480090:intron 25.0%
!!! CAATTTTTAGAAAAAGGGAA+AGG + chr3_3:85263025-85263044 Msa0480090:intron 25.0%
!! TTGATTAAGGGTTTAGAATT+AGG - chr3_3:85263452-85263471 None:intergenic 25.0%
!! CTTTTCATTATTATGAAGCA+CGG + chr3_3:85263671-85263690 Msa0480090:intron 25.0%
! TATCAAATTATTGTCGGTAT+TGG + chr3_3:85263765-85263784 Msa0480090:intron 25.0%
!!! TTCTTTTGGAATTGGATTTT+AGG + chr3_3:85264011-85264030 Msa0480090:intron 25.0%
!!! TCTTTTGGAATTGGATTTTA+GGG + chr3_3:85264012-85264031 Msa0480090:intron 25.0%
! TTCTGATATACTTCTATATC+AGG + chr3_3:85264083-85264102 Msa0480090:CDS 25.0%
! GTTAATTATGAATTTCCATG+AGG - chr3_3:85264126-85264145 None:intergenic 25.0%
! CTATTACATAATAAATCAGG+GGG - chr3_3:85264171-85264190 None:intergenic 25.0%
! ATATAAGAATGCATTTACAG+AGG - chr3_3:85264265-85264284 None:intergenic 25.0%
! GTAAGAATTATACTAACTCA+AGG - chr3_3:85264296-85264315 None:intergenic 25.0%
!!! TTATTTTGTCCATTTATGAC+AGG + chr3_3:85264529-85264548 Msa0480090:intron 25.0%
! TTTAATTAATCAGCTCATTC+TGG - chr3_3:85264596-85264615 None:intergenic 25.0%
! ATATTTAAAAAACCTTCGAC+AGG - chr3_3:85264721-85264740 None:intergenic 25.0%
! TGAAATGTGACTAATGTTTA+GGG - chr3_3:85264890-85264909 None:intergenic 25.0%
! TTGAAATGTGACTAATGTTT+AGG - chr3_3:85264891-85264910 None:intergenic 25.0%
! GTAGAAAGAAAAAGAATAGT+GGG - chr3_3:85265284-85265303 None:intergenic 25.0%
! AGTAGAAAGAAAAAGAATAG+TGG - chr3_3:85265285-85265304 None:intergenic 25.0%
!! TTTTTGCTTATAATAGGGAA+CGG + chr3_3:85265581-85265600 Msa0480090:intron 25.0%
!!! GAATTTTTTGTTGCTTGTAA+TGG + chr3_3:85265963-85265982 Msa0480090:intron 25.0%
!! ATTGTGATTTTTACTGCATA+TGG + chr3_3:85266004-85266023 Msa0480090:intron 25.0%
! TAATTCTTTACTTTCTTGTG+TGG - chr3_3:85266323-85266342 None:intergenic 25.0%
! TTAAAGGTAGAAGTAAACTA+AGG + chr3_3:85266462-85266481 Msa0480090:intron 25.0%
! ACTATAAGTCAACCATTAAA+AGG + chr3_3:85266488-85266507 Msa0480090:intron 25.0%
!! GTCACAAAATTTTCTGTTAT+TGG + chr3_3:85266677-85266696 Msa0480090:intron 25.0%
!! TGAGAATGGAATCAAAATTT+TGG - chr3_3:85267205-85267224 None:intergenic 25.0%
! AAGAATGCTTCATTCAATAT+GGG - chr3_3:85267385-85267404 None:intergenic 25.0%
! AAAGAATGCTTCATTCAATA+TGG - chr3_3:85267386-85267405 None:intergenic 25.0%
! AAGGAAAATTAACATCTACA+GGG - chr3_3:85267449-85267468 None:intergenic 25.0%
! AAAGGAAAATTAACATCTAC+AGG - chr3_3:85267450-85267469 None:intergenic 25.0%
! GATAATAACAATACTAACCT+TGG - chr3_3:85267549-85267568 None:intergenic 25.0%
! AACAAGTAAATGAAGAGAAA+AGG - chr3_3:85267592-85267611 None:intergenic 25.0%
!! AATGTCAAGATTTTACTCTA+TGG + chr3_3:85267867-85267886 Msa0480090:intron 25.0%
! AATAAGATTACCTACCTAAA+AGG + chr3_3:85267940-85267959 Msa0480090:intron 25.0%
!! TATTAACTTCATGTCCTTTT+AGG - chr3_3:85267957-85267976 None:intergenic 25.0%
! AATGGAAAGGAAAAATAACA+GGG - chr3_3:85267991-85268010 None:intergenic 25.0%
! AAATGGAAAGGAAAAATAAC+AGG - chr3_3:85267992-85268011 None:intergenic 25.0%
! ATTACACCAAAATTAACATG+AGG - chr3_3:85268122-85268141 None:intergenic 25.0%
! GTAATCACTAAATGTCATAA+TGG + chr3_3:85268167-85268186 Msa0480090:intron 25.0%
! TATCTGTTACGATAATAAAG+GGG - chr3_3:85268312-85268331 None:intergenic 25.0%
! CATATCTGTTACGATAATAA+AGG - chr3_3:85268314-85268333 None:intergenic 25.0%
! TTATTATCGTAACAGATATG+TGG + chr3_3:85268314-85268333 Msa0480090:intron 25.0%
! TGAAATAGTTCTTTCTACTA+TGG + chr3_3:85268467-85268486 Msa0480090:intron 25.0%
!! TTAATATTTGGAACCTGAAT+GGG - chr3_3:85268736-85268755 None:intergenic 25.0%
!! TTTAATATTTGGAACCTGAA+TGG - chr3_3:85268737-85268756 None:intergenic 25.0%
! TCGCACAATTGAAAAAAAAA+GGG - chr3_3:85268993-85269012 None:intergenic 25.0%
! ATCGCACAATTGAAAAAAAA+AGG - chr3_3:85268994-85269013 None:intergenic 25.0%
!!! TTTTTTCAATTGTGCGATTT+TGG + chr3_3:85268996-85269015 Msa0480090:intron 25.0%
!!! TGTTCAACATTTTTCTAAGA+AGG + chr3_3:85269216-85269235 Msa0480090:intron 25.0%
!!! TTTCATTTGTTGTGTTAACT+CGG - chr3_3:85269405-85269424 None:intergenic 25.0%
! TGTAAAAAATAAGTCATGTG+AGG + chr3_3:85269691-85269710 Msa0480090:intron 25.0%
! GTAAAAAATAAGTCATGTGA+GGG + chr3_3:85269692-85269711 Msa0480090:intron 25.0%
!! ATCTTTTCTTGAATGAAATG+CGG + chr3_3:85271188-85271207 Msa0480090:intron 25.0%
!! TTTTTAAATATCCAGCCAAT+AGG - chr3_3:85271327-85271346 None:intergenic 25.0%
! AAACATGTTCAACATTAGAA+AGG + chr3_3:85271376-85271395 Msa0480090:intron 25.0%
! AGAAATCCTAAATTGCAATA+AGG + chr3_3:85271989-85272008 Msa0480090:intron 25.0%
!!! TAAAAGCCTTATTGCAATTT+AGG - chr3_3:85271998-85272017 None:intergenic 25.0%
! TAAAGAGAAGGAAAAAAACA+TGG - chr3_3:85272303-85272322 None:intergenic 25.0%
!!! TTTTTTTCCTTCTCTTTAAC+AGG + chr3_3:85272305-85272324 Msa0480090:intron 25.0%
!! TTAGATAAAGTATTAGGAGA+AGG + chr3_3:85272363-85272382 Msa0480090:CDS 25.0%
!!! CAATAAGCTCGATTTTTTTT+TGG + chr3_3:85272640-85272659 Msa0480090:three_prime_UTR 25.0%
! ACAGTACAAATAAATAATGG+AGG - chr3_3:85272725-85272744 None:intergenic 25.0%
! TGGTGAAATCTTTATCAATT+TGG - chr3_3:85272758-85272777 None:intergenic 25.0%
!! ATTTGATAGTCATCTTAAGT+TGG + chr3_3:85272782-85272801 Msa0480090:three_prime_UTR 25.0%
!! TTTGATAGTCATCTTAAGTT+GGG + chr3_3:85272783-85272802 Msa0480090:three_prime_UTR 25.0%
AGTTGAATAAACAAACGATG+AGG - chr3_3:85260722-85260741 None:intergenic 30.0%
TAAAACAAGCATAACCTGAA+GGG - chr3_3:85260849-85260868 None:intergenic 30.0%
ATAAAACAAGCATAACCTGA+AGG - chr3_3:85260850-85260869 None:intergenic 30.0%
!! GTTGTTTTCATAAGTTGTAG+TGG - chr3_3:85260999-85261018 None:intergenic 30.0%
TGAATAAAGATGATTTGAGC+TGG - chr3_3:85261246-85261265 None:intergenic 30.0%
AAGCATCATCAGGAATTTAA+TGG - chr3_3:85261364-85261383 None:intergenic 30.0%
AGATCTAGTTATATGAGTTC+AGG - chr3_3:85261415-85261434 None:intergenic 30.0%
! TTTTGGTATGCATTAGAATG+TGG + chr3_3:85261434-85261453 Msa0480090:intron 30.0%
TTTATGGGATTAATGTAGTC+GGG + chr3_3:85261569-85261588 Msa0480090:intron 30.0%
AACAAATGTGTGAATTCGAT+TGG - chr3_3:85261648-85261667 None:intergenic 30.0%
AAATGTGGCTTAAACTATTC+TGG - chr3_3:85261690-85261709 None:intergenic 30.0%
ACATGGTAACTGAAAATCAA+AGG + chr3_3:85261814-85261833 Msa0480090:intron 30.0%
!!! TTTTTTAAGGGTCATACATC+CGG + chr3_3:85261852-85261871 Msa0480090:intron 30.0%
!! ATTGTGTTTTAAGCTGTAAC+CGG - chr3_3:85261874-85261893 None:intergenic 30.0%
TTACAGCTTAAAACACAATC+TGG + chr3_3:85261875-85261894 Msa0480090:intron 30.0%
! TGGTTAATTGCATTAGTTTC+TGG + chr3_3:85261895-85261914 Msa0480090:intron 30.0%
TGACTAAAAAACAGGAAAGT+TGG - chr3_3:85261972-85261991 None:intergenic 30.0%
TGACTCACAACAATTATCTA+AGG + chr3_3:85262054-85262073 Msa0480090:CDS 30.0%
AAAGTGTAAAGAACCTTTGA+AGG - chr3_3:85262124-85262143 None:intergenic 30.0%
TTTAAAGAGAAATCTCGCAA+GGG + chr3_3:85262333-85262352 Msa0480090:CDS 30.0%
TTATGTTGTAAGTTCTGTGA+TGG + chr3_3:85262636-85262655 Msa0480090:intron 30.0%
! AGGGTTTAGAATTAGGAAAA+TGG - chr3_3:85263445-85263464 None:intergenic 30.0%
TAATAAAAAGAGCGGAAAGA+CGG + chr3_3:85263515-85263534 Msa0480090:intron 30.0%
CGTGCTTCATAATAATGAAA+AGG - chr3_3:85263673-85263692 None:intergenic 30.0%
TTTAGATATTTAGGCCTTGA+TGG + chr3_3:85263895-85263914 Msa0480090:intron 30.0%
GATAAGAAAAAAAAAAGGCC+CGG - chr3_3:85263949-85263968 None:intergenic 30.0%
TGATATACTTCTATATCAGG+TGG + chr3_3:85264086-85264105 Msa0480090:intron 30.0%
GATATACTTCTATATCAGGT+GGG + chr3_3:85264087-85264106 Msa0480090:intron 30.0%
TAGTGAAAGTTGAAAAATCC+AGG + chr3_3:85264196-85264215 Msa0480090:intron 30.0%
AGTAACATTAGCATATTTCC+TGG - chr3_3:85264217-85264236 None:intergenic 30.0%
CATTTACAGAGGTTTCAAAA+AGG - chr3_3:85264254-85264273 None:intergenic 30.0%
TGAAGATCAAAAGCAACATT+TGG + chr3_3:85264359-85264378 Msa0480090:CDS 30.0%
!! GAGCGGGTTAATAATTTATA+CGG + chr3_3:85264402-85264421 Msa0480090:CDS 30.0%
AAATGAAGCTGAATAGTGAA+TGG - chr3_3:85264481-85264500 None:intergenic 30.0%
!! AACAGAGTTTTATGGGATAT+AGG + chr3_3:85264640-85264659 Msa0480090:intron 30.0%
AGACACTTACTAGTACTAAT+TGG - chr3_3:85264953-85264972 None:intergenic 30.0%
TTTGCTTAATAGAGAACAGA+GGG - chr3_3:85265072-85265091 None:intergenic 30.0%
ATTTGCTTAATAGAGAACAG+AGG - chr3_3:85265073-85265092 None:intergenic 30.0%
AACTAACTTCACACGTATTA+AGG + chr3_3:85265095-85265114 Msa0480090:intron 30.0%
GTAAAGGCAAGAACAATAAA+AGG - chr3_3:85265234-85265253 None:intergenic 30.0%
ACAAAAGGAGCTTACAATAA+GGG + chr3_3:85265630-85265649 Msa0480090:intron 30.0%
AATTTATTCTGACAGTGTTG+CGG + chr3_3:85265751-85265770 Msa0480090:intron 30.0%
!! AGGATCAAGAATATTGATTC+TGG - chr3_3:85265819-85265838 None:intergenic 30.0%
TCGAAATGAATGTGTGAATT+TGG + chr3_3:85266157-85266176 Msa0480090:intron 30.0%
!! TAAATTTGCTGGTACAAAGA+TGG + chr3_3:85266373-85266392 Msa0480090:intron 30.0%
!! AAATTTGCTGGTACAAAGAT+GGG + chr3_3:85266374-85266393 Msa0480090:intron 30.0%
ACTTCTACCTTTAACTATGA+AGG - chr3_3:85266456-85266475 None:intergenic 30.0%
GTCAACCATTAAAAGGAATT+TGG + chr3_3:85266495-85266514 Msa0480090:intron 30.0%
TCTTAGTAAACTTGAGCATA+AGG - chr3_3:85266535-85266554 None:intergenic 30.0%
AGGCAAACCAAAATGTTATT+GGG + chr3_3:85266607-85266626 Msa0480090:intron 30.0%
!!! CATGATTTTGGTTTGATGAA+GGG + chr3_3:85266797-85266816 Msa0480090:intron 30.0%
!!! TTTCTAGTTTGGTTTTGTAC+AGG - chr3_3:85266994-85267013 None:intergenic 30.0%
! GAATGGAATCAAAATTTTGG+AGG - chr3_3:85267202-85267221 None:intergenic 30.0%
TTCCATTCTCAGTTACTTAT+TGG + chr3_3:85267214-85267233 Msa0480090:intron 30.0%
TCCATTCTCAGTTACTTATT+GGG + chr3_3:85267215-85267234 Msa0480090:intron 30.0%
CTTGGGTTAAAATTTACTTG+TGG + chr3_3:85267262-85267281 Msa0480090:intron 30.0%
GTTAAAATTTACTTGTGGTC+AGG + chr3_3:85267267-85267286 Msa0480090:intron 30.0%
GCAAGTTGCATATTGATATA+TGG + chr3_3:85267407-85267426 Msa0480090:intron 30.0%
AGTACTTTAATTATCCACTG+TGG + chr3_3:85267645-85267664 Msa0480090:intron 30.0%
GAGAGAAGATTATTACATTC+AGG - chr3_3:85267708-85267727 None:intergenic 30.0%
! GAATCACCTCATGTTAATTT+TGG + chr3_3:85268113-85268132 Msa0480090:intron 30.0%
TTAGTGATTACGACATTTAG+TGG - chr3_3:85268158-85268177 None:intergenic 30.0%
TAAATGTCATAATGGCCATT+AGG + chr3_3:85268175-85268194 Msa0480090:intron 30.0%
! ATAATAAAGGGGTGTAAAGT+AGG - chr3_3:85268301-85268320 None:intergenic 30.0%
GAAAGACTAATTCATGATCA+TGG - chr3_3:85268368-85268387 None:intergenic 30.0%
ACATTGGCAGTAATATATTG+AGG - chr3_3:85268420-85268439 None:intergenic 30.0%
ATATATTACTGCCAATGTTG+AGG + chr3_3:85268422-85268441 Msa0480090:intron 30.0%
AACAATAAAGACTGATGAAC+AGG - chr3_3:85268539-85268558 None:intergenic 30.0%
TAAAACTTTCCCTTCAGAAA+GGG - chr3_3:85268814-85268833 None:intergenic 30.0%
CGCACAATTGAAAAAAAAAG+GGG - chr3_3:85268992-85269011 None:intergenic 30.0%
! TAGTTTCAGTTGAGCAATTT+TGG + chr3_3:85269025-85269044 Msa0480090:intron 30.0%
AGGGACTAAAAAATCAGAAA+GGG - chr3_3:85269066-85269085 None:intergenic 30.0%
!! ACATTTTTCTAAGAAGGTGA+AGG + chr3_3:85269222-85269241 Msa0480090:intron 30.0%
CGCATACATAACAAGAATTT+AGG + chr3_3:85269245-85269264 Msa0480090:intron 30.0%
!! GTTCAAGTTGAAGGTTATAA+TGG - chr3_3:85269310-85269329 None:intergenic 30.0%
TTAGGATCTTCAACTTCATA+AGG + chr3_3:85269459-85269478 Msa0480090:intron 30.0%
TCGATGAAGTATATAGATGA+GGG - chr3_3:85269495-85269514 None:intergenic 30.0%
TCAGAAGTTGAACAATACAA+AGG - chr3_3:85269616-85269635 None:intergenic 30.0%
AATCTTGAGCTAGTTATTGA+AGG + chr3_3:85269635-85269654 Msa0480090:intron 30.0%
AAACACGATCAACATTAGAA+AGG - chr3_3:85269664-85269683 None:intergenic 30.0%
! TTGAATTTTGTAAGATGGAC+AGG - chr3_3:85269813-85269832 None:intergenic 30.0%
!! TCGGTTTGAATTTTGTAAGA+TGG - chr3_3:85269818-85269837 None:intergenic 30.0%
CACTTGATCTTCAATATCAT+TGG - chr3_3:85270118-85270137 None:intergenic 30.0%
TGATATTGAAGATCAAGTGA+AGG + chr3_3:85270119-85270138 Msa0480090:intron 30.0%
TGCTTGAGATTAAAGAACAA+CGG + chr3_3:85270184-85270203 Msa0480090:intron 30.0%
AAGATGTTCCATTCAAAATG+AGG + chr3_3:85270387-85270406 Msa0480090:intron 30.0%
! AACAAAGTCCTCATTTTGAA+TGG - chr3_3:85270398-85270417 None:intergenic 30.0%
ACAAAATCAGTTTGAAGATC+AGG - chr3_3:85270640-85270659 None:intergenic 30.0%
! ATTCTTCAAGTTTCTTCTGT+TGG + chr3_3:85270805-85270824 Msa0480090:intron 30.0%
TGCTTGAGATAAAAGAACTA+AGG - chr3_3:85270981-85271000 None:intergenic 30.0%
GGATATTGAAAATCAAACGA+CGG - chr3_3:85271024-85271043 None:intergenic 30.0%
!! CGTTTGATTTTCAATATCCT+TGG + chr3_3:85271025-85271044 Msa0480090:intron 30.0%
AGAGAAAAGGATTGAAGAAA+AGG - chr3_3:85271051-85271070 None:intergenic 30.0%
CCAAGGATATTAAAGAGAAA+AGG - chr3_3:85271064-85271083 None:intergenic 30.0%
! CCTTTTCTCTTTAATATCCT+TGG + chr3_3:85271061-85271080 Msa0480090:intron 30.0%
TTCTGTTGTGTGAATGAATT+GGG + chr3_3:85271246-85271265 Msa0480090:intron 30.0%
AGATTTCTTTCTTCTCCTAT+TGG + chr3_3:85271309-85271328 Msa0480090:intron 30.0%
TCTTGAGCTGGTTATATTAA+AGG - chr3_3:85271405-85271424 None:intergenic 30.0%
TGTGAATGAACTGTTAACAA+AGG + chr3_3:85271453-85271472 Msa0480090:intron 30.0%
CAAATTGATGTTCAACTTGA+AGG + chr3_3:85271763-85271782 Msa0480090:intron 30.0%
TTCAACTTGAAGGATAATAG+TGG + chr3_3:85271773-85271792 Msa0480090:intron 30.0%
! GGTAAAATGTTGCACATTTT+TGG + chr3_3:85271862-85271881 Msa0480090:intron 30.0%
! TAATCTTTTGTACCTAGAGT+TGG + chr3_3:85272095-85272114 Msa0480090:intron 30.0%
! ACATATTTTCTGTGAGCTTA+GGG + chr3_3:85272262-85272281 Msa0480090:intron 30.0%
TAAAAATGCAGCAGATATAG+CGG + chr3_3:85272389-85272408 Msa0480090:CDS 30.0%
TCATAATGTTTACCAAGCAA+TGG + chr3_3:85272422-85272441 Msa0480090:CDS 30.0%
CATAATGTTTACCAAGCAAT+GGG + chr3_3:85272423-85272442 Msa0480090:CDS 30.0%
AAGATGACTATCAAATACAG+TGG - chr3_3:85272778-85272797 None:intergenic 30.0%
!!! TAATGGTAGCCTTTTTTGAT+CGG + chr3_3:85272876-85272895 Msa0480090:three_prime_UTR 30.0%
!!! TATTGTTTTTGTGCTCCCTT+TGG - chr3_3:85260379-85260398 None:intergenic 35.0%
! GGGAGCACAAAAACAATAAA+AGG + chr3_3:85260381-85260400 Msa0480090:five_prime_UTR 35.0%
TGAATTACTTTACAGAGGTC+GGG - chr3_3:85260666-85260685 None:intergenic 35.0%
GTGAATTACTTTACAGAGGT+CGG - chr3_3:85260667-85260686 None:intergenic 35.0%
TGCTGTGAATTACTTTACAG+AGG - chr3_3:85260671-85260690 None:intergenic 35.0%
! CTAATGCATTCTTTTTCTGC+AGG + chr3_3:85260744-85260763 Msa0480090:intron 35.0%
ATTCACCTTGGAAACTACTT+CGG + chr3_3:85260803-85260822 Msa0480090:CDS 35.0%
!! CTACACTGATAATGGAAAGA+AGG - chr3_3:85261149-85261168 None:intergenic 35.0%
CTTTCCATTATCAGTGTAGT+CGG + chr3_3:85261150-85261169 Msa0480090:intron 35.0%
ATATCCGACTACACTGATAA+TGG - chr3_3:85261157-85261176 None:intergenic 35.0%
CGATACACTTTACTTCATTG+TGG + chr3_3:85261321-85261340 Msa0480090:CDS 35.0%
!! ATATCGAGAAAAGCATCATC+AGG - chr3_3:85261374-85261393 None:intergenic 35.0%
TCATAAGCAGCACAATTAGA+AGG - chr3_3:85261494-85261513 None:intergenic 35.0%
GCTTTACCGAGTTTACTATT+TGG + chr3_3:85261514-85261533 Msa0480090:intron 35.0%
CACTTGCCAAATAGTAAACT+CGG - chr3_3:85261523-85261542 None:intergenic 35.0%
ATTGGACCGTTCACTATTTA+TGG + chr3_3:85261553-85261572 Msa0480090:intron 35.0%
TTGGACCGTTCACTATTTAT+GGG + chr3_3:85261554-85261573 Msa0480090:intron 35.0%
TAACTAGGTCAAATGATTCG+AGG + chr3_3:85261597-85261616 Msa0480090:intron 35.0%
CACACATTTGTTTATTACCG+AGG + chr3_3:85261656-85261675 Msa0480090:intron 35.0%
CTATTCTGGATCAATATCCT+CGG - chr3_3:85261676-85261695 None:intergenic 35.0%
GCTCTACTTTGTATCAAACA+TGG + chr3_3:85261797-85261816 Msa0480090:intron 35.0%
! AATTGCATTAGTTTCTGGAG+AGG + chr3_3:85261900-85261919 Msa0480090:intron 35.0%
! AATCTGAAGTGGTGAGAAAT+GGG - chr3_3:85262009-85262028 None:intergenic 35.0%
! AAATCTGAAGTGGTGAGAAA+TGG - chr3_3:85262010-85262029 None:intergenic 35.0%
GATAATTGTTGTGAGTCATG+AGG - chr3_3:85262052-85262071 None:intergenic 35.0%
ACATCAATTCTACATGTGCA+CGG - chr3_3:85262263-85262282 None:intergenic 35.0%
CTAAGTTCTGTAACACCAAT+CGG + chr3_3:85262288-85262307 Msa0480090:CDS 35.0%
GTTTAAAGAGAAATCTCGCA+AGG + chr3_3:85262332-85262351 Msa0480090:CDS 35.0%
TTAAAGAGAAATCTCGCAAG+GGG + chr3_3:85262334-85262353 Msa0480090:CDS 35.0%
! GTGACCTTCTAAAAGTAAGA+TGG + chr3_3:85262494-85262513 Msa0480090:intron 35.0%
AGACGATGGAATGATGAATT+AGG - chr3_3:85263286-85263305 None:intergenic 35.0%
TAACAACATGATGTAGACGA+TGG - chr3_3:85263300-85263319 None:intergenic 35.0%
AATAAAAAGAGCGGAAAGAC+GGG + chr3_3:85263516-85263535 Msa0480090:intron 35.0%
GACAAAGCTCAAAAAGAATG+TGG - chr3_3:85263617-85263636 None:intergenic 35.0%
ATAGCTATGAAGTGTGGATA+CGG - chr3_3:85263842-85263861 None:intergenic 35.0%
ATTGCTCTTCAGCTAAAGTA+AGG + chr3_3:85263860-85263879 Msa0480090:intron 35.0%
!! TTTTAGGGAGATGATGAAGT+TGG + chr3_3:85264027-85264046 Msa0480090:intron 35.0%
TTTAGGGAGATGATGAAGTT+GGG + chr3_3:85264028-85264047 Msa0480090:intron 35.0%
! TTTGACTTATCCTGTTCTGA+TGG + chr3_3:85264059-85264078 Msa0480090:CDS 35.0%
CGGGTTAATAATTTATACGG+AGG + chr3_3:85264405-85264424 Msa0480090:CDS 35.0%
ATTTATACGGAGGAAGAAAG+TGG + chr3_3:85264415-85264434 Msa0480090:CDS 35.0%
GGAAGAAAGTGGAAGAAATT+AGG + chr3_3:85264426-85264445 Msa0480090:CDS 35.0%
AGAAAGTGGAAGAAATTAGG+CGG + chr3_3:85264429-85264448 Msa0480090:CDS 35.0%
ATTAATCAGCTCATTCTGGT+GGG - chr3_3:85264592-85264611 None:intergenic 35.0%
AATTAATCAGCTCATTCTGG+TGG - chr3_3:85264593-85264612 None:intergenic 35.0%
AAGGCAAGAACAATAAAAGG+AGG - chr3_3:85265231-85265250 None:intergenic 35.0%
TTTGAGGAGTGAACATGTAA+AGG - chr3_3:85265250-85265269 None:intergenic 35.0%
TGGGGAATTGTTACAACTAA+AGG + chr3_3:85265444-85265463 Msa0480090:intron 35.0%
GGAATTGTTACAACTAAAGG+TGG + chr3_3:85265447-85265466 Msa0480090:intron 35.0%
GTTACAACTAAAGGTGGTAT+TGG + chr3_3:85265453-85265472 Msa0480090:intron 35.0%
GACAAAAGGAGCTTACAATA+AGG + chr3_3:85265629-85265648 Msa0480090:intron 35.0%
GATAGTAACATTGCATGCTA+TGG + chr3_3:85265671-85265690 Msa0480090:intron 35.0%
ATTTATTCTGACAGTGTTGC+GGG + chr3_3:85265752-85265771 Msa0480090:intron 35.0%
TTGATTCTGGATTGATCAGA+AGG - chr3_3:85265806-85265825 None:intergenic 35.0%
! TTTTTGTAGCTCTTGTTGCA+TGG + chr3_3:85265893-85265912 Msa0480090:intron 35.0%
AGATCAAATGCAAACAGTTC+AGG - chr3_3:85265937-85265956 None:intergenic 35.0%
TGAATTTGGTTGAAAGTCGA+TGG + chr3_3:85266171-85266190 Msa0480090:intron 35.0%
CCAAGATGAGGATTCTTAAT+AGG - chr3_3:85266211-85266230 None:intergenic 35.0%
CCTATTAAGAATCCTCATCT+TGG + chr3_3:85266208-85266227 Msa0480090:intron 35.0%
AATGTCATACAACCAAGATG+AGG - chr3_3:85266223-85266242 None:intergenic 35.0%
GTTGTATGACATTGAATGCT+GGG + chr3_3:85266230-85266249 Msa0480090:intron 35.0%
AATAATTAGACAGTCAGTCG+AGG + chr3_3:85266350-85266369 Msa0480090:intron 35.0%
GAGGATACCTTCATAGTTAA+AGG + chr3_3:85266446-85266465 Msa0480090:intron 35.0%
CAGGCAAACCAAAATGTTAT+TGG + chr3_3:85266606-85266625 Msa0480090:intron 35.0%
!! ACACTTAAGTTGGTTGTTTC+AGG - chr3_3:85266650-85266669 None:intergenic 35.0%
ACCAAAACAACCAACTTAAG+TGG + chr3_3:85266740-85266759 Msa0480090:intron 35.0%
CCAAAACAACCAACTTAAGT+GGG + chr3_3:85266741-85266760 Msa0480090:intron 35.0%
CAAAATCATGGTTGAGTAGT+TGG - chr3_3:85266787-85266806 None:intergenic 35.0%
! CAACTACTCAACCATGATTT+TGG + chr3_3:85266785-85266804 Msa0480090:intron 35.0%
CCTTCATCAAACCAAAATCA+TGG - chr3_3:85266799-85266818 None:intergenic 35.0%
!!! CCATGATTTTGGTTTGATGA+AGG + chr3_3:85266796-85266815 Msa0480090:intron 35.0%
TGTTAGTGTGCTAAGATCAA+TGG + chr3_3:85266832-85266851 Msa0480090:intron 35.0%
TGCATTAGACTAAATCGACA+AGG + chr3_3:85266865-85266884 Msa0480090:intron 35.0%
ACTCACAAACAACTTTGAAC+TGG + chr3_3:85266927-85266946 Msa0480090:intron 35.0%
!! ATGCGCAATTCTTTCTAGTT+TGG - chr3_3:85267005-85267024 None:intergenic 35.0%
AAACAGACCCAAAAACAGAA+CGG + chr3_3:85267077-85267096 Msa0480090:intron 35.0%
!!! CTGGTTTTTTTTGTGTGTTG+TGG - chr3_3:85267129-85267148 None:intergenic 35.0%
! AGGTTCTTTGTTGTCAATTC+TGG - chr3_3:85267148-85267167 None:intergenic 35.0%
ACCCAATAAGTAACTGAGAA+TGG - chr3_3:85267219-85267238 None:intergenic 35.0%
ATAAACTCTGAGCAAGAGAA+AGG - chr3_3:85267468-85267487 None:intergenic 35.0%
! GCAAAACTGATTCATTTCCA+AGG + chr3_3:85267529-85267548 Msa0480090:CDS 35.0%
GGTGAGCATTTAAAGACAAA+GGG - chr3_3:85267571-85267590 None:intergenic 35.0%
AGGTGAGCATTTAAAGACAA+AGG - chr3_3:85267572-85267591 None:intergenic 35.0%
TTATTACATTCAGGCCTTTC+AGG - chr3_3:85267699-85267718 None:intergenic 35.0%
TTAAGTCACCAACATCTTAG+TGG + chr3_3:85267801-85267820 Msa0480090:intron 35.0%
TTCCAAAACCACTAAGATGT+TGG - chr3_3:85267812-85267831 None:intergenic 35.0%
! TGTGTGCTTTTGGTATTTTG+AGG + chr3_3:85267912-85267931 Msa0480090:intron 35.0%
!! AACTTCATGTCCTTTTAGGT+AGG - chr3_3:85267953-85267972 None:intergenic 35.0%
GCTGATAACTTCATGTATAC+TGG + chr3_3:85268037-85268056 Msa0480090:intron 35.0%
AAAAGAATGTAAGTGACGTG+TGG + chr3_3:85268080-85268099 Msa0480090:intron 35.0%
AAAGAATGTAAGTGACGTGT+GGG + chr3_3:85268081-85268100 Msa0480090:intron 35.0%
CCAAAAAAAAGAGACCAGAT+GGG - chr3_3:85268264-85268283 None:intergenic 35.0%
ACCAAAAAAAAGAGACCAGA+TGG - chr3_3:85268265-85268284 None:intergenic 35.0%
TATGTTCAATATCCCATCTC+AGG - chr3_3:85268505-85268524 None:intergenic 35.0%
CATGATTGGAAAATGCTTTG+AGG - chr3_3:85268568-85268587 None:intergenic 35.0%
!! CAAAGCATTTTCCAATCATG+TGG + chr3_3:85268568-85268587 Msa0480090:intron 35.0%
!! TGATAACCATTTTTGTGTGC+AGG + chr3_3:85268630-85268649 Msa0480090:intron 35.0%
ATGAATGCCAAAACATGAAC+TGG + chr3_3:85268662-85268681 Msa0480090:CDS 35.0%
TGAATGCCAAAACATGAACT+GGG + chr3_3:85268663-85268682 Msa0480090:CDS 35.0%
! ATCAAGGCATCTGTTAAAAG+AGG - chr3_3:85268700-85268719 None:intergenic 35.0%
TGTTTAATGACCCTTTCTGA+AGG + chr3_3:85268801-85268820 Msa0480090:intron 35.0%
GTTTAATGACCCTTTCTGAA+GGG + chr3_3:85268802-85268821 Msa0480090:intron 35.0%
CTAAAACTTTCCCTTCAGAA+AGG - chr3_3:85268815-85268834 None:intergenic 35.0%
!!! GAAAGTTTTAGACTGATGTG+TGG + chr3_3:85268824-85268843 Msa0480090:intron 35.0%
!!! TTGCCTGGATAGTTTTATGT+AGG + chr3_3:85268949-85268968 Msa0480090:intron 35.0%
AAGCCTACATAAAACTATCC+AGG - chr3_3:85268955-85268974 None:intergenic 35.0%
TGTAGGCTTAATTGCACTTA+TGG + chr3_3:85268966-85268985 Msa0480090:intron 35.0%
ATTGCTCAACTGAAACTAGA+GGG - chr3_3:85269023-85269042 None:intergenic 35.0%
AATTGCTCAACTGAAACTAG+AGG - chr3_3:85269024-85269043 None:intergenic 35.0%
GGACTAAAAAATCAGAAAGG+GGG - chr3_3:85269064-85269083 None:intergenic 35.0%
GGGACTAAAAAATCAGAAAG+GGG - chr3_3:85269065-85269084 None:intergenic 35.0%
GAGGGACTAAAAAATCAGAA+AGG - chr3_3:85269067-85269086 None:intergenic 35.0%
TAACGTCAAAAGCTGAATGA+GGG - chr3_3:85269085-85269104 None:intergenic 35.0%
TTAACGTCAAAAGCTGAATG+AGG - chr3_3:85269086-85269105 None:intergenic 35.0%
!! CAAAGTGATGTTCAAGTTGA+AGG - chr3_3:85269319-85269338 None:intergenic 35.0%
TCACTTTGCATTCATCTTGT+CGG + chr3_3:85269331-85269350 Msa0480090:intron 35.0%
CAAAGAATGCAAAGGAATTG+TGG - chr3_3:85269379-85269398 None:intergenic 35.0%
GACACATAGTGGTAAAGATT+AGG + chr3_3:85269441-85269460 Msa0480090:intron 35.0%
TCTTCAACTTCATAAGGAGT+AGG + chr3_3:85269465-85269484 Msa0480090:intron 35.0%
CGATGAAGTATATAGATGAG+GGG - chr3_3:85269494-85269513 None:intergenic 35.0%
CTCGATGAAGTATATAGATG+AGG - chr3_3:85269496-85269515 None:intergenic 35.0%
AATACAAAGGCAATGAAGCA+GGG - chr3_3:85269603-85269622 None:intergenic 35.0%
ATTGCTTGTGTTGTGTGAAT+CGG - chr3_3:85269837-85269856 None:intergenic 35.0%
ATTGCTTGTGTTGTGTGAAT+CGG - chr3_3:85269837-85269856 None:intergenic 35.0%
! AAAGAAACCTTTGAGAGACA+TGG + chr3_3:85269898-85269917 Msa0480090:intron 35.0%
TCTTCCTATCATTGATGTCT+AGG - chr3_3:85270037-85270056 None:intergenic 35.0%
TGTATGAAAAGAGAAAGGCT+TGG + chr3_3:85270084-85270103 Msa0480090:intron 35.0%
! GAAGTACCTTGATTTGAAAG+AGG + chr3_3:85270288-85270307 Msa0480090:intron 35.0%
ACTGTTCCTCTTTCAAATCA+AGG - chr3_3:85270297-85270316 None:intergenic 35.0%
GTTGAATGTGCTTGATTCAT+TGG + chr3_3:85270423-85270442 Msa0480090:intron 35.0%
GCAACTTGAAGAAAGAGAAA+AGG + chr3_3:85270450-85270469 Msa0480090:intron 35.0%
! AGAAAAGGTCCTTGTTTCAA+AGG + chr3_3:85270465-85270484 Msa0480090:intron 35.0%
ACAAAATCAGTTTGAAGACC+AGG + chr3_3:85270526-85270545 Msa0480090:intron 35.0%
!! GTTGAAGGTGTTTGTTTCAA+TGG - chr3_3:85270745-85270764 None:intergenic 35.0%
GAAACTTGAAGAATGAGAGA+AGG - chr3_3:85270799-85270818 None:intergenic 35.0%
!! TTAATATCCTTGGCCTTGAA+CGG + chr3_3:85271071-85271090 Msa0480090:intron 35.0%
! TTTTCTTGAATGAAATGCGG+CGG + chr3_3:85271191-85271210 Msa0480090:intron 35.0%
CTTCTGTTGTGTGAATGAAT+TGG + chr3_3:85271245-85271264 Msa0480090:intron 35.0%
TTGGGTTATGTAAGACGAAA+AGG + chr3_3:85271264-85271283 Msa0480090:intron 35.0%
TTAACAAAGGCAAAGAAGCA+GGG + chr3_3:85271466-85271485 Msa0480090:intron 35.0%
ATTGTCTATCAATAGGCTGA+TGG + chr3_3:85271536-85271555 Msa0480090:intron 35.0%
AACACATCGTGGTAAAGATT+AGG - chr3_3:85271630-85271649 None:intergenic 35.0%
ACATAAAACATGTGCTTCCA+CGG - chr3_3:85271712-85271731 None:intergenic 35.0%
TAGAATGCATTACCAACTCT+AGG - chr3_3:85272110-85272129 None:intergenic 35.0%
CGCTAACAAAGACTAATTCT+CGG - chr3_3:85272142-85272161 None:intergenic 35.0%
!! CGAGAATTAGTCTTTGTTAG+CGG + chr3_3:85272140-85272159 Msa0480090:intron 35.0%
AGCTCACAGAAAATATGTGA+GGG - chr3_3:85272260-85272279 None:intergenic 35.0%
AAGCTCACAGAAAATATGTG+AGG - chr3_3:85272261-85272280 None:intergenic 35.0%
! CACATATTTTCTGTGAGCTT+AGG + chr3_3:85272261-85272280 Msa0480090:intron 35.0%
! ATTCATCATCTGCCTCATTT+TGG + chr3_3:85272535-85272554 Msa0480090:three_prime_UTR 35.0%
!!! CCTCATTTTGGAGTAATCAT+GGG + chr3_3:85272547-85272566 Msa0480090:three_prime_UTR 35.0%
TTATTTGACGCAAAGCCTAA+AGG + chr3_3:85272601-85272620 Msa0480090:three_prime_UTR 35.0%
ATCAGGAATACACAACCTTT+AGG - chr3_3:85272619-85272638 None:intergenic 35.0%
AAAATCGAGCTTATTGCATC+AGG - chr3_3:85272636-85272655 None:intergenic 35.0%
TGTTTATGAGAGAAAGACAG+AGG + chr3_3:85272840-85272859 Msa0480090:three_prime_UTR 35.0%
TTAGCAACCGGTATATCCAA+AGG + chr3_3:85260360-85260379 Msa0480090:five_prime_UTR 40.0%
TAGCAACCGGTATATCCAAA+GGG + chr3_3:85260361-85260380 Msa0480090:five_prime_UTR 40.0%
GAATTACTTTACAGAGGTCG+GGG - chr3_3:85260665-85260684 None:intergenic 40.0%
GTTTCCAAGGTGAATTGAAC+CGG - chr3_3:85260798-85260817 None:intergenic 40.0%
! AAGTTGTAGTGGAGAGCTTA+TGG - chr3_3:85260988-85261007 None:intergenic 40.0%
GGCAAGTGTGAACTTGATAT+TGG + chr3_3:85261535-85261554 Msa0480090:intron 40.0%
TTCGAGGTTTCTTGTCAATG+AGG + chr3_3:85261613-85261632 Msa0480090:intron 40.0%
! AGTTTCTGGAGAGGAATTTG+AGG + chr3_3:85261909-85261928 Msa0480090:intron 40.0%
CTGTGCAAGAAAATCTGAAG+TGG - chr3_3:85262020-85262039 None:intergenic 40.0%
CATTTATCCGCAATGGACAA+TGG - chr3_3:85262194-85262213 None:intergenic 40.0%
GTGCACATGTAGAATTGATG+TGG + chr3_3:85262262-85262281 Msa0480090:CDS 40.0%
TAAAGAGAAATCTCGCAAGG+GGG + chr3_3:85262335-85262354 Msa0480090:CDS 40.0%
TTAGAAGGTCACTGTCAAGA+AGG - chr3_3:85262486-85262505 None:intergenic 40.0%
TGTAAGTTCTGTGATGGTTG+TGG + chr3_3:85262642-85262661 Msa0480090:intron 40.0%
TGGAATCATATGTGTCGTGT+CGG - chr3_3:85263729-85263748 None:intergenic 40.0%
ATGAAGTGTGGATACGGATA+CGG - chr3_3:85263836-85263855 None:intergenic 40.0%
AGAGCAATAGCTATGAAGTG+TGG - chr3_3:85263848-85263867 None:intergenic 40.0%
TTAGGGAGATGATGAAGTTG+GGG + chr3_3:85264029-85264048 Msa0480090:intron 40.0%
ATATCAGAAGCCATCAGAAC+AGG - chr3_3:85264072-85264091 None:intergenic 40.0%
!! GGTTTTGACACTATACCTCA+TGG + chr3_3:85264108-85264127 Msa0480090:intron 40.0%
! GCTTTTGATCTTCACCAACA+GGG - chr3_3:85264353-85264372 None:intergenic 40.0%
! TGCTTTTGATCTTCACCAAC+AGG - chr3_3:85264354-85264373 None:intergenic 40.0%
GAAAGTGGAAGAAATTAGGC+GGG + chr3_3:85264430-85264449 Msa0480090:CDS 40.0%
!! GCGAGGAGGTACTATATTTA+AGG + chr3_3:85264551-85264570 Msa0480090:intron 40.0%
TAATAGAGAACAGAGGGAGT+AGG - chr3_3:85265066-85265085 None:intergenic 40.0%
!!! GTGGGAGATTTCTGTTTTTG+AGG - chr3_3:85265266-85265285 None:intergenic 40.0%
TTGCTTATAATAGGGAACGG+AGG + chr3_3:85265584-85265603 Msa0480090:intron 40.0%
TGCTTATAATAGGGAACGGA+GGG + chr3_3:85265585-85265604 Msa0480090:intron 40.0%
GTAACATTGCATGCTATGGA+TGG + chr3_3:85265675-85265694 Msa0480090:intron 40.0%
TGTTCTTCAGTTCAATTCCC+AGG - chr3_3:85265707-85265726 None:intergenic 40.0%
CAGTTGAATGCTACAGAGTA+CGG - chr3_3:85266077-85266096 None:intergenic 40.0%
TTTGGTTGAAAGTCGATGGA+TGG + chr3_3:85266175-85266194 Msa0480090:intron 40.0%
GGTTGTATGACATTGAATGC+TGG + chr3_3:85266229-85266248 Msa0480090:intron 40.0%
GCAACACTAAGCTTACTTTC+TGG - chr3_3:85266270-85266289 None:intergenic 40.0%
CATGTATGAGAAGACCAAGA+AGG + chr3_3:85266408-85266427 Msa0480090:intron 40.0%
TATGAGAAGACCAAGAAGGA+GGG + chr3_3:85266412-85266431 Msa0480090:intron 40.0%
! CTTCTGGCCCAATAACATTT+TGG - chr3_3:85266617-85266636 None:intergenic 40.0%
! AAGTTGGTTGTTTCAGGCAA+AGG - chr3_3:85266644-85266663 None:intergenic 40.0%
GACTTCGTTCACACTTAAGT+TGG - chr3_3:85266660-85266679 None:intergenic 40.0%
!!! ATTTTCTGTTATTGGTGCCG+TGG + chr3_3:85266685-85266704 Msa0480090:intron 40.0%
!!! CCCACTTAAGTTGGTTGTTT+TGG - chr3_3:85266744-85266763 None:intergenic 40.0%
AACAACCAACTTAAGTGGGA+AGG + chr3_3:85266745-85266764 Msa0480090:intron 40.0%
TTTGAACTGGTAGCATCGTT+TGG + chr3_3:85266940-85266959 Msa0480090:intron 40.0%
!! TCTCCATCCGTTCTGTTTTT+GGG - chr3_3:85267087-85267106 None:intergenic 40.0%
! TTCTCCATCCGTTCTGTTTT+TGG - chr3_3:85267088-85267107 None:intergenic 40.0%
GAGAAGAGCTAAAAACCTGA+TGG + chr3_3:85267103-85267122 Msa0480090:intron 40.0%
! ATTCCCTGGATTTTTGCATG+TGG + chr3_3:85267303-85267322 Msa0480090:intron 40.0%
TGGAAATCGACAATCCTGAA+AGG + chr3_3:85267682-85267701 Msa0480090:CDS 40.0%
! CGCTTCTGGAAAAACAAAAG+AGG + chr3_3:85267740-85267759 Msa0480090:CDS 40.0%
! CACCAACATCTTAGTGGTTT+TGG + chr3_3:85267807-85267826 Msa0480090:intron 40.0%
!! TTGAAAGCATCAAACACGCT+TGG - chr3_3:85267849-85267868 None:intergenic 40.0%
TGTCATAATGGCCATTAGGA+AGG + chr3_3:85268179-85268198 Msa0480090:intron 40.0%
!!! CCCATCTGGTCTCTTTTTTT+TGG + chr3_3:85268261-85268280 Msa0480090:intron 40.0%
! TAAAGGGGTGTAAAGTAGGA+AGG - chr3_3:85268297-85268316 None:intergenic 40.0%
TCGGTAATTCTCCTCAACAT+TGG - chr3_3:85268436-85268455 None:intergenic 40.0%
TTCTACTATGGCCAGTCAAA+AGG + chr3_3:85268479-85268498 Msa0480090:intron 40.0%
TCCAATCATGTGGTGATTCT+TGG + chr3_3:85268578-85268597 Msa0480090:intron 40.0%
CAACTTCCTGCACACAAAAA+TGG - chr3_3:85268639-85268658 None:intergenic 40.0%
GAATGCCAAAACATGAACTG+GGG + chr3_3:85268664-85268683 Msa0480090:CDS 40.0%
CCAGGCAAAACTTATTCTCA+TGG - chr3_3:85268937-85268956 None:intergenic 40.0%
! CCATGAGAATAAGTTTTGCC+TGG + chr3_3:85268934-85268953 Msa0480090:intron 40.0%
TTGCTCAACTGAAACTAGAG+GGG - chr3_3:85269022-85269041 None:intergenic 40.0%
ATCAGAAAGGGGGTAAATGT+AGG - chr3_3:85269054-85269073 None:intergenic 40.0%
CATTGACGTTAAGGCAGTTA+AGG - chr3_3:85269281-85269300 None:intergenic 40.0%
TTGTCTATCAATGAGGCTGA+TGG - chr3_3:85269532-85269551 None:intergenic 40.0%
GCTTGCATTGTCTATCAATG+AGG - chr3_3:85269539-85269558 None:intergenic 40.0%
GATAGACAATGCAAGCTCTT+AGG + chr3_3:85269543-85269562 Msa0480090:intron 40.0%
ACAATGCAAGCTCTTAGGAA+TGG + chr3_3:85269548-85269567 Msa0480090:intron 40.0%
CAATACAAAGGCAATGAAGC+AGG - chr3_3:85269604-85269623 None:intergenic 40.0%
! TGAGTTCAGCTGTCGTTTAA+CGG - chr3_3:85270009-85270028 None:intergenic 40.0%
GTCGGTGTATGAAAAGAGAA+AGG + chr3_3:85270079-85270098 Msa0480090:intron 40.0%
AAGAGAAAGGCTTGGAGAAA+AGG + chr3_3:85270092-85270111 Msa0480090:intron 40.0%
GAGAAGCAGTTTGTAGAACA+AGG + chr3_3:85270249-85270268 Msa0480090:intron 40.0%
AAGAGGAACAGTTTGTAGAG+CGG + chr3_3:85270305-85270324 Msa0480090:intron 40.0%
GAATGTGCTTGATTCATTGG+AGG + chr3_3:85270426-85270445 Msa0480090:intron 40.0%
! AAAGGTCCTTGTTTCAAAGG+AGG + chr3_3:85270468-85270487 Msa0480090:intron 40.0%
!! ACTTCTCCTCCTTTGAAACA+AGG - chr3_3:85270477-85270496 None:intergenic 40.0%
GGTGCTTGTTTCAAAGGAAA+AGG - chr3_3:85270697-85270716 None:intergenic 40.0%
!! AGAGAAGGTGCTTGTTTCAA+AGG - chr3_3:85270703-85270722 None:intergenic 40.0%
GCAACTTGAAGAAAGAGAGA+AGG - chr3_3:85270718-85270737 None:intergenic 40.0%
!! GAAGGTGTTTGTTTCAATGG+AGG - chr3_3:85270742-85270761 None:intergenic 40.0%
TTGTAGAACAAGGTGCAAGA+AGG - chr3_3:85270906-85270925 None:intergenic 40.0%
GAGAAGCAGTTTGTAGAACA+AGG - chr3_3:85270249-85270268 None:intergenic 40.0%
AAGGATTGAAGAAAAGGCCA+AGG - chr3_3:85271045-85271064 None:intergenic 40.0%
TCGCTTCAAGATTCGAATCA+TGG - chr3_3:85271134-85271153 None:intergenic 40.0%
! ACTCTTACCTTTGAGAGACA+TGG - chr3_3:85271219-85271238 None:intergenic 40.0%
TTCTTTCTTCTCCTATTGGC+TGG + chr3_3:85271313-85271332 Msa0480090:intron 40.0%
!! TCAACTTTTGAGTCTTGAGC+TGG - chr3_3:85271417-85271436 None:intergenic 40.0%
GCTCAAGACTCAAAAGTTGA+AGG + chr3_3:85271417-85271436 Msa0480090:intron 40.0%
GTTAACAAAGGCAAAGAAGC+AGG + chr3_3:85271465-85271484 Msa0480090:intron 40.0%
!! ACAATGCAAGCGCTTTGAAA+TGG - chr3_3:85271521-85271540 None:intergenic 40.0%
CGCTTGCATTGTCTATCAAT+AGG + chr3_3:85271529-85271548 Msa0480090:intron 40.0%
TTAGGATCTTCAACTTCAGC+AGG - chr3_3:85271612-85271631 None:intergenic 40.0%
TGTTTGACAACAACACATCG+TGG - chr3_3:85271641-85271660 None:intergenic 40.0%
CTGCATCTGTTGTGTTAACT+CGG + chr3_3:85271666-85271685 Msa0480090:intron 40.0%
TGCTCCAAGATTCATCTTGT+CGG - chr3_3:85271740-85271759 None:intergenic 40.0%
! ACATTTTACCAAGCTGGTGA+AGG - chr3_3:85271852-85271871 None:intergenic 40.0%
! TGTGCAACATTTTACCAAGC+TGG - chr3_3:85271858-85271877 None:intergenic 40.0%
GGATCGCTCAACTAAAACTA+GGG + chr3_3:85271965-85271984 Msa0480090:intron 40.0%
GATCGCTCAACTAAAACTAG+GGG + chr3_3:85271966-85271985 Msa0480090:intron 40.0%
AGAGACTACATAGGAGTAGA+AGG - chr3_3:85272184-85272203 None:intergenic 40.0%
TCCTATGTAGTCTCTTCAAC+TGG + chr3_3:85272189-85272208 Msa0480090:intron 40.0%
ACCAGTTGAAGAGACTACAT+AGG - chr3_3:85272193-85272212 None:intergenic 40.0%
GCTCACAGAAAATATGTGAG+GGG - chr3_3:85272259-85272278 None:intergenic 40.0%
TAGCGAACCTGTTAAAGAGA+AGG - chr3_3:85272315-85272334 None:intergenic 40.0%
TCTTTAACAGGTTCGCTATG+AGG + chr3_3:85272317-85272336 Msa0480090:intron 40.0%
!! GATTTTCGAGGAGACAATGA+TGG + chr3_3:85272445-85272464 Msa0480090:CDS 40.0%
!!! GCCTCATTTTGGAGTAATCA+TGG + chr3_3:85272546-85272565 Msa0480090:three_prime_UTR 40.0%
CCCATGATTACTCCAAAATG+AGG - chr3_3:85272550-85272569 None:intergenic 40.0%
TGTGCTCCCTTTGGATATAC+CGG - chr3_3:85260370-85260389 None:intergenic 45.0%
ATAGACGGGGAAGAGTAAGA+TGG + chr3_3:85260423-85260442 Msa0480090:exon 45.0%
TAGACGGGGAAGAGTAAGAT+GGG + chr3_3:85260424-85260443 Msa0480090:exon 45.0%
GATGGGTGTTTGTCATTACG+CGG + chr3_3:85260441-85260460 Msa0480090:exon 45.0%
!! ACTTCGGTGCCATCAAGAAT+TGG + chr3_3:85260819-85260838 Msa0480090:CDS 45.0%
!! CTTCGGTGCCATCAAGAATT+GGG + chr3_3:85260820-85260839 Msa0480090:CDS 45.0%
AAGGGCAACCCAATTCTTGA+TGG - chr3_3:85260831-85260850 None:intergenic 45.0%
GCGACTCACACAAACAAGTA+CGG + chr3_3:85261178-85261197 Msa0480090:intron 45.0%
CTTCATTGTGGATCTGCATG+CGG + chr3_3:85261333-85261352 Msa0480090:CDS 45.0%
GTCAGAACCATTGTCCATTG+CGG + chr3_3:85262184-85262203 Msa0480090:intron 45.0%
ATTCTGTTTAGCCAGCCGAT+TGG - chr3_3:85262306-85262325 None:intergenic 45.0%
! GATATTTAGGCCTTGATGGC+TGG + chr3_3:85263899-85263918 Msa0480090:intron 45.0%
AAAGTCTTCACCAGCCATCA+AGG - chr3_3:85263912-85263931 None:intergenic 45.0%
! CAGTCTGATTTTGTCCCTGT+TGG + chr3_3:85264336-85264355 Msa0480090:intron 45.0%
AGGCGGGTGAGGATTTATAT+TGG + chr3_3:85264446-85264465 Msa0480090:intron 45.0%
TTGTCCATTTATGACAGGCG+AGG + chr3_3:85264534-85264553 Msa0480090:intron 45.0%
! TGCTCCAGTTGGAGGTATAA+GGG - chr3_3:85264675-85264694 None:intergenic 45.0%
TTATACCTCCAACTGGAGCA+CGG + chr3_3:85264675-85264694 Msa0480090:CDS 45.0%
AAAAACCTTCGACAGGCCAT+CGG - chr3_3:85264714-85264733 None:intergenic 45.0%
GTGACTAATGTTTAGGGACG+AGG - chr3_3:85264884-85264903 None:intergenic 45.0%
!! CTGCCTACTCTAGAGCTATT+CGG + chr3_3:85265411-85265430 Msa0480090:intron 45.0%
ATGGCATATCTGAGCAAGTG+TGG + chr3_3:85266023-85266042 Msa0480090:intron 45.0%
GTCAGTCGAGGTAAATTTGC+TGG + chr3_3:85266362-85266381 Msa0480090:intron 45.0%
GTATGAGAAGACCAAGAAGG+AGG + chr3_3:85266411-85266430 Msa0480090:intron 45.0%
ATCTAGTCTACCCTCCTTCT+TGG - chr3_3:85266425-85266444 None:intergenic 45.0%
AAGAAGGAGGGTAGACTAGA+TGG + chr3_3:85266424-85266443 Msa0480090:intron 45.0%
TTCAGGCAAAGGACAACTTC+TGG - chr3_3:85266633-85266652 None:intergenic 45.0%
TCTGGACTATGGTTGGACAA+TGG + chr3_3:85266713-85266732 Msa0480090:intron 45.0%
CTGGACTATGGTTGGACAAT+GGG + chr3_3:85266714-85266733 Msa0480090:intron 45.0%
TACGACCTTCCCACTTAAGT+TGG - chr3_3:85266753-85266772 None:intergenic 45.0%
TTAAGTGGGAAGGTCGTATG+TGG + chr3_3:85266755-85266774 Msa0480090:intron 45.0%
TGCGCATTAGCAAGCTAGAT+TGG + chr3_3:85267018-85267037 Msa0480090:intron 45.0%
CTGATCTGTACGCATCGTTT+AGG - chr3_3:85267045-85267064 None:intergenic 45.0%
AGACCCAAAAACAGAACGGA+TGG + chr3_3:85267081-85267100 Msa0480090:intron 45.0%
! TTTTGTGTGTTGTGGCCATC+AGG - chr3_3:85267121-85267140 None:intergenic 45.0%
TTCATTGCTTGCGCAGCTTT+GGG - chr3_3:85267175-85267194 None:intergenic 45.0%
AAAATCCAGGGAATCAGCCA+TGG - chr3_3:85267297-85267316 None:intergenic 45.0%
CCACCACATGCAAAAATCCA+GGG - chr3_3:85267309-85267328 None:intergenic 45.0%
ACCACCACATGCAAAAATCC+AGG - chr3_3:85267310-85267329 None:intergenic 45.0%
AGCTGTTAGATTCACCACAG+TGG - chr3_3:85267662-85267681 None:intergenic 45.0%
CTGTGGTGAATCTAACAGCT+TGG + chr3_3:85267662-85267681 Msa0480090:intron 45.0%
TCTATATACCAGCTCGCTTC+TGG + chr3_3:85267726-85267745 Msa0480090:CDS 45.0%
!! TTGTTTTTCCAGAAGCGAGC+TGG - chr3_3:85267737-85267756 None:intergenic 45.0%
CAAACACGCTTGGTTGAACA+AGG - chr3_3:85267839-85267858 None:intergenic 45.0%
! ACCAAAAGCACACACTTTGC+AGG - chr3_3:85267906-85267925 None:intergenic 45.0%
! TGGCCATTAGGAAGGTTGAT+TGG + chr3_3:85268187-85268206 Msa0480090:intron 45.0%
! GGCCATTAGGAAGGTTGATT+GGG + chr3_3:85268188-85268207 Msa0480090:intron 45.0%
! GCCATTAGGAAGGTTGATTG+GGG + chr3_3:85268189-85268208 Msa0480090:intron 45.0%
TCCCCAATCAACCTTCCTAA+TGG - chr3_3:85268193-85268212 None:intergenic 45.0%
TAAAGCCCATTGAACCCATC+TGG + chr3_3:85268247-85268266 Msa0480090:intron 45.0%
! AGAGACCAGATGGGTTCAAT+GGG - chr3_3:85268255-85268274 None:intergenic 45.0%
! AAGAGACCAGATGGGTTCAA+TGG - chr3_3:85268256-85268275 None:intergenic 45.0%
GCCAAGAATCACCACATGAT+TGG - chr3_3:85268582-85268601 None:intergenic 45.0%
! ATGTGCCCCAGTTCATGTTT+TGG - chr3_3:85268672-85268691 None:intergenic 45.0%
GGGTTGCAAATGGTCAATCA+AGG - chr3_3:85268716-85268735 None:intergenic 45.0%
TGACCATTTGCAACCCATTC+AGG + chr3_3:85268720-85268739 Msa0480090:CDS 45.0%
!! GAACCTGAATGGGTTGCAAA+TGG - chr3_3:85268726-85268745 None:intergenic 45.0%
AGAAAGGGGGTAAATGTAGG+CGG - chr3_3:85269051-85269070 None:intergenic 45.0%
TGGCACACACATTGACGTTA+AGG - chr3_3:85269290-85269309 None:intergenic 45.0%
CTCGGCAACAAAGAATGCAA+AGG - chr3_3:85269387-85269406 None:intergenic 45.0%
! ATGTGTCGTTGTCAGACAAG+TGG - chr3_3:85269428-85269447 None:intergenic 45.0%
TGTCTGACAACGACACATAG+TGG + chr3_3:85269430-85269449 Msa0480090:intron 45.0%
AATGAGGCTGATGGAAAGAG+CGG - chr3_3:85269523-85269542 None:intergenic 45.0%
! CAAGCTCTTAGGAATGGACT+TGG + chr3_3:85269554-85269573 Msa0480090:intron 45.0%
GACACAGTGTTAGTGAGAGT+CGG - chr3_3:85269791-85269810 None:intergenic 45.0%
GTCGCCTAGACATCAATGAT+AGG + chr3_3:85270030-85270049 Msa0480090:intron 45.0%
AGAGGAACAGTTTGTAGAGC+GGG + chr3_3:85270306-85270325 Msa0480090:intron 45.0%
TTTCTCCAAGTTCCTTCCGT+TGG - chr3_3:85270362-85270381 None:intergenic 45.0%
TCACAAGATTGAAGAGCTCC+TGG - chr3_3:85270547-85270566 None:intergenic 45.0%
AAGAGGAGCAGTTTGTAGAG+CGG - chr3_3:85270860-85270879 None:intergenic 45.0%
! GAAGTACCTTGAGTCGAAAG+AGG - chr3_3:85270877-85270896 None:intergenic 45.0%
CTTGAAGCGATGCAAGTTCT+TGG + chr3_3:85271144-85271163 Msa0480090:intron 45.0%
AGGACAACGATAGTGAGAGT+CGG + chr3_3:85271284-85271303 Msa0480090:intron 45.0%
!! CAAGCGCTTTGAAATGGACT+TGG - chr3_3:85271515-85271534 None:intergenic 45.0%
TCAATAGGCTGATGGAAGAG+CGG + chr3_3:85271544-85271563 Msa0480090:intron 45.0%
!! TCCGGAGAAGTATCTAGATG+AGG + chr3_3:85271575-85271594 Msa0480090:intron 45.0%
CCCTCATCTAGATACTTCTC+CGG - chr3_3:85271579-85271598 None:intergenic 45.0%
!! CCGGAGAAGTATCTAGATGA+GGG + chr3_3:85271576-85271595 Msa0480090:intron 45.0%
!! CGGAGAAGTATCTAGATGAG+GGG + chr3_3:85271577-85271596 Msa0480090:intron 45.0%
TCTTCAACTTCAGCAGGAGT+AGG - chr3_3:85271606-85271625 None:intergenic 45.0%
CTCGGCTACAAAGAATGCAA+AGG + chr3_3:85271684-85271703 Msa0480090:intron 45.0%
CAAAGAATGCAAAGGAACCG+TGG + chr3_3:85271692-85271711 Msa0480090:intron 45.0%
GTGACCGACAAGATGAATCT+TGG + chr3_3:85271733-85271752 Msa0480090:intron 45.0%
GGGATCGCTCAACTAAAACT+AGG + chr3_3:85271964-85271983 Msa0480090:intron 45.0%
GAGGAACTCATGTCAGATTC+AGG + chr3_3:85272336-85272355 Msa0480090:CDS 45.0%
! ACCAAGCAATGGGATTTTCG+AGG + chr3_3:85272433-85272452 Msa0480090:CDS 45.0%
TCCTCGAAAATCCCATTGCT+TGG - chr3_3:85272437-85272456 None:intergenic 45.0%
GTATAGTTGACTGCTGGAAG+TGG + chr3_3:85272573-85272592 Msa0480090:three_prime_UTR 45.0%
! GAGGACTGCATTGATGCTAA+TGG + chr3_3:85272859-85272878 Msa0480090:three_prime_UTR 45.0%
!! AAAGATAAATTAATTAAAAA+TGG - chr3_3:85262391-85262410 None:intergenic 5.0%
!!! TCTATAAATATTTTAAAATT+TGG + chr3_3:85267613-85267632 Msa0480090:intron 5.0%
!! CATATATATTTAAATTTAAA+TGG - chr3_3:85268009-85268028 None:intergenic 5.0%
!!! TTTTTTATAATAATCAATAA+GGG + chr3_3:85271903-85271922 Msa0480090:intron 5.0%
!!! TTATTTTATTATAAAAATAC+TGG + chr3_3:85272047-85272066 Msa0480090:intron 5.0%
! TAGAGTGGTGCAGCATCGAA+TGG - chr3_3:85260611-85260630 None:intergenic 50.0%
!! TGGAGAGGTATCGGATAGAG+TGG - chr3_3:85260626-85260645 None:intergenic 50.0%
TACTTTACAGAGGTCGGGGA+AGG - chr3_3:85260661-85260680 None:intergenic 50.0%
TGCAGGAAACGAGTTGTCTC+CGG + chr3_3:85260761-85260780 Msa0480090:intron 50.0%
! TGAACCGGTAGGTTGAACTC+CGG - chr3_3:85260783-85260802 None:intergenic 50.0%
CCAAGGTGAATTGAACCGGT+AGG - chr3_3:85260794-85260813 None:intergenic 50.0%
!! CCTACCGGTTCAATTCACCT+TGG + chr3_3:85260791-85260810 Msa0480090:CDS 50.0%
! TGGCACCGAAGTAGTTTCCA+AGG - chr3_3:85260811-85260830 None:intergenic 50.0%
! CAAGAATTGGGTTGCCCTTC+AGG + chr3_3:85260832-85260851 Msa0480090:CDS 50.0%
TGTAGTCGGGCTTCGTAACT+AGG + chr3_3:85261582-85261601 Msa0480090:intron 50.0%
TCTTGTCAATGAGGCTGAGC+AGG + chr3_3:85261622-85261641 Msa0480090:intron 50.0%
ACATGCCAGGTAAATGGCTG+CGG - chr3_3:85262092-85262111 None:intergenic 50.0%
CAGCCATTTACCTGGCATGT+GGG + chr3_3:85262092-85262111 Msa0480090:CDS 50.0%
AGCCATTTACCTGGCATGTG+GGG + chr3_3:85262093-85262112 Msa0480090:CDS 50.0%
ATGTGGGGTGGATCCTTCAA+AGG + chr3_3:85262108-85262127 Msa0480090:CDS 50.0%
GTTCTGTAACACCAATCGGC+TGG + chr3_3:85262292-85262311 Msa0480090:CDS 50.0%
ATGAAGCACGGACACTCCTT+AGG + chr3_3:85263683-85263702 Msa0480090:intron 50.0%
GAACACTGACGCCTAACCTA+AGG - chr3_3:85263702-85263721 None:intergenic 50.0%
AGACACGACACAGACACTCA+CGG - chr3_3:85263802-85263821 None:intergenic 50.0%
TGTGGATACGGATACGGACA+CGG - chr3_3:85263830-85263849 None:intergenic 50.0%
TAACCCGCTCAGCTAAGTCA+CGG - chr3_3:85264392-85264411 None:intergenic 50.0%
TGGAAGAAATTAGGCGGGTG+AGG + chr3_3:85264435-85264454 Msa0480090:intron 50.0%
TCCATTTATGACAGGCGAGG+AGG + chr3_3:85264537-85264556 Msa0480090:intron 50.0%
ACCTCCTCGCCTGTCATAAA+TGG - chr3_3:85264541-85264560 None:intergenic 50.0%
! GCTCCAGTTGGAGGTATAAG+GGG - chr3_3:85264674-85264693 None:intergenic 50.0%
! GTGCTCCAGTTGGAGGTATA+AGG - chr3_3:85264676-85264695 None:intergenic 50.0%
ATAATCCGTGCTCCAGTTGG+AGG - chr3_3:85264683-85264702 None:intergenic 50.0%
GACATAATCCGTGCTCCAGT+TGG - chr3_3:85264686-85264705 None:intergenic 50.0%
CGGATTATGTCCCTAACCGA+TGG + chr3_3:85264695-85264714 Msa0480090:CDS 50.0%
!! AGCTCTAGAGTAGGCAGCAA+TGG - chr3_3:85265408-85265427 None:intergenic 50.0%
!! GCACCGAATAGCTCTAGAGT+AGG - chr3_3:85265417-85265436 None:intergenic 50.0%
!! AGCTATTCGGTGCTGTAGCA+TGG + chr3_3:85265424-85265443 Msa0480090:intron 50.0%
!! GCTATTCGGTGCTGTAGCAT+GGG + chr3_3:85265425-85265444 Msa0480090:intron 50.0%
!! CTATTCGGTGCTGTAGCATG+GGG + chr3_3:85265426-85265445 Msa0480090:intron 50.0%
TGCTATGGATGGCATTTGCC+TGG + chr3_3:85265686-85265705 Msa0480090:intron 50.0%
GCTATGGATGGCATTTGCCT+GGG + chr3_3:85265687-85265706 Msa0480090:intron 50.0%
AAGGAGGGTAGACTAGATGG+AGG + chr3_3:85266427-85266446 Msa0480090:intron 50.0%
! GACAAGGTAGAAAGCGCAGT+GGG + chr3_3:85266881-85266900 Msa0480090:intron 50.0%
GCAGTGGGATAAGAGTGACA+TGG + chr3_3:85266896-85266915 Msa0480090:intron 50.0%
GTTCATTGCTTGCGCAGCTT+TGG - chr3_3:85267176-85267195 None:intergenic 50.0%
ACTTGTGGTCAGGCATTCCA+TGG + chr3_3:85267277-85267296 Msa0480090:intron 50.0%
! CCCTGGATTTTTGCATGTGG+TGG + chr3_3:85267306-85267325 Msa0480090:intron 50.0%
! GCCTGCAAAGTGTGTGCTTT+TGG + chr3_3:85267902-85267921 Msa0480090:intron 50.0%
CCAGTCAAAAGGCCTGAGAT+GGG + chr3_3:85268490-85268509 Msa0480090:intron 50.0%
TGCAACATGTTCCGTCGTGT+TGG + chr3_3:85269128-85269147 Msa0480090:intron 50.0%
! ACATGTTCCGTCGTGTTGGT+TGG + chr3_3:85269132-85269151 Msa0480090:intron 50.0%
ATCCACTCCAACCAACACGA+CGG - chr3_3:85269142-85269161 None:intergenic 50.0%
! GCTCTTAGGAATGGACTTGG+TGG + chr3_3:85269557-85269576 Msa0480090:intron 50.0%
AGTGTTAGTGAGAGTCGGTG+GGG - chr3_3:85269786-85269805 None:intergenic 50.0%
CAGTGTTAGTGAGAGTCGGT+GGG - chr3_3:85269787-85269806 None:intergenic 50.0%
ACAGTGTTAGTGAGAGTCGG+TGG - chr3_3:85269788-85269807 None:intergenic 50.0%
AGCGGTTCCATGTCTCTCAA+AGG - chr3_3:85269908-85269927 None:intergenic 50.0%
TCTGCGAATTCCGCATCCAA+AGG + chr3_3:85269958-85269977 Msa0480090:intron 50.0%
ATTGTTGCTCTGCAGGCCTT+TGG - chr3_3:85269977-85269996 None:intergenic 50.0%
TGCCATCATTGTTGCTCTGC+AGG - chr3_3:85269984-85270003 None:intergenic 50.0%
AGAGGAGCAGTTTGTAGAGC+GGG - chr3_3:85270859-85270878 None:intergenic 50.0%
ACTGCTCCTCTTTCGACTCA+AGG + chr3_3:85270868-85270887 Msa0480090:intron 50.0%
CTACAATCCGTTCAAGGCCA+AGG - chr3_3:85271081-85271100 None:intergenic 50.0%
CGACGACTACAATCCGTTCA+AGG - chr3_3:85271087-85271106 None:intergenic 50.0%
!! GCGCTTTGAAATGGACTTGG+TGG - chr3_3:85271512-85271531 None:intergenic 50.0%
!! GGAAGAGCGGATTGTTCATC+CGG + chr3_3:85271557-85271576 Msa0480090:intron 50.0%
! GGTAAGAGTGTGTGTGTGGT+GGG + chr3_3:85271926-85271945 Msa0480090:intron 50.0%
! GTAAGAGTGTGTGTGTGGTG+GGG + chr3_3:85271927-85271946 Msa0480090:intron 50.0%
! TAAGAGTGTGTGTGTGGTGG+GGG + chr3_3:85271928-85271947 Msa0480090:intron 50.0%
GGGCATGTATAGTTGACTGC+TGG + chr3_3:85272567-85272586 Msa0480090:three_prime_UTR 50.0%
CACCACGAGTCGACGATAGA+CGG + chr3_3:85260408-85260427 Msa0480090:five_prime_UTR 55.0%
ACCACGAGTCGACGATAGAC+GGG + chr3_3:85260409-85260428 Msa0480090:five_prime_UTR 55.0%
AGCGATGGGACGAAGCATGA+CGG - chr3_3:85260469-85260488 None:intergenic 55.0%
GAGCGAGTGAGTACAGCGAT+GGG - chr3_3:85260483-85260502 None:intergenic 55.0%
TGAGCGAGTGAGTACAGCGA+TGG - chr3_3:85260484-85260503 None:intergenic 55.0%
! GTGGTGCAGCATCGAATGGT+GGG - chr3_3:85260607-85260626 None:intergenic 55.0%
! AGTGGTGCAGCATCGAATGG+TGG - chr3_3:85260608-85260627 None:intergenic 55.0%
! GGGAGTCTGTGGAGAGGTAT+CGG - chr3_3:85260635-85260654 None:intergenic 55.0%
GTCTCCGGAGTTCAACCTAC+CGG + chr3_3:85260776-85260795 Msa0480090:CDS 55.0%
GTCAACCGCAGCCATTTACC+TGG + chr3_3:85262084-85262103 Msa0480090:CDS 55.0%
GCAGCCATTTACCTGGCATG+TGG + chr3_3:85262091-85262110 Msa0480090:CDS 55.0%
CACCCCACATGCCAGGTAAA+TGG - chr3_3:85262098-85262117 None:intergenic 55.0%
CATTTACCTGGCATGTGGGG+TGG + chr3_3:85262096-85262115 Msa0480090:CDS 55.0%
CATGTGCACGGACATGAGAC+TGG - chr3_3:85262251-85262270 None:intergenic 55.0%
GCACGGACACTCCTTAGGTT+AGG + chr3_3:85263688-85263707 Msa0480090:intron 55.0%
TGACCCGTGACTTAGCTGAG+CGG + chr3_3:85264385-85264404 Msa0480090:CDS 55.0%
AACCCGCTCAGCTAAGTCAC+GGG - chr3_3:85264391-85264410 None:intergenic 55.0%
! GTTGGAGGTATAAGGGGCTC+TGG - chr3_3:85264668-85264687 None:intergenic 55.0%
GAGCCCCTTATACCTCCAAC+TGG + chr3_3:85264668-85264687 Msa0480090:intron 55.0%
! CTTCGACAGGCCATCGGTTA+GGG - chr3_3:85264708-85264727 None:intergenic 55.0%
GTGCACATAAGCGGGGAAAG+AGG - chr3_3:85264746-85264765 None:intergenic 55.0%
CCATAGTCCAGACTCAGCCA+CGG - chr3_3:85266705-85266724 None:intergenic 55.0%
GGCTGAGTCTGGACTATGGT+TGG + chr3_3:85266706-85266725 Msa0480090:intron 55.0%
! CGACAAGGTAGAAAGCGCAG+TGG + chr3_3:85266880-85266899 Msa0480090:intron 55.0%
!! CTTGCGCAGCTTTGGGTCTA+AGG - chr3_3:85267168-85267187 None:intergenic 55.0%
! GCATTCCATGGCTGATTCCC+TGG + chr3_3:85267289-85267308 Msa0480090:intron 55.0%
GCCAGTCAAAAGGCCTGAGA+TGG + chr3_3:85268489-85268508 Msa0480090:intron 55.0%
! CCCATCTCAGGCCTTTTGAC+TGG - chr3_3:85268493-85268512 None:intergenic 55.0%
!! TTCCGTCGTGTTGGTTGGAG+TGG + chr3_3:85269137-85269156 Msa0480090:intron 55.0%
GTGATGCGAGTTCTCTGCAG+CGG - chr3_3:85269926-85269945 None:intergenic 55.0%
GGCCTGCAGAGCAACAATGA+TGG + chr3_3:85269979-85269998 Msa0480090:intron 55.0%
GGCGGTTCCATGTCTCTCAA+AGG + chr3_3:85271209-85271228 Msa0480090:intron 55.0%
CATATGCGCCTTCACCAGCT+TGG + chr3_3:85271841-85271860 Msa0480090:intron 55.0%
! AGGGGGTAAGAGTGTGTGTG+TGG + chr3_3:85271922-85271941 Msa0480090:intron 55.0%
! GGGTAAGAGTGTGTGTGTGG+TGG + chr3_3:85271925-85271944 Msa0480090:intron 55.0%
! AAGAGTGTGTGTGTGGTGGG+GGG + chr3_3:85271929-85271948 Msa0480090:intron 55.0%
CCACGAGTCGACGATAGACG+GGG + chr3_3:85260410-85260429 Msa0480090:five_prime_UTR 60.0%
AGGAGTGGGAGTCTGTGGAG+AGG - chr3_3:85260641-85260660 None:intergenic 60.0%
ACAGAGGTCGGGGAAGGAGT+GGG - chr3_3:85260655-85260674 None:intergenic 60.0%
TACAGAGGTCGGGGAAGGAG+TGG - chr3_3:85260656-85260675 None:intergenic 60.0%
AAGGATCCACCCCACATGCC+AGG - chr3_3:85262105-85262124 None:intergenic 60.0%
GACCCGTGACTTAGCTGAGC+GGG + chr3_3:85264386-85264405 Msa0480090:CDS 60.0%
! CCTTCGACAGGCCATCGGTT+AGG - chr3_3:85264709-85264728 None:intergenic 60.0%
CCTAACCGATGGCCTGTCGA+AGG + chr3_3:85264706-85264725 Msa0480090:CDS 60.0%
TGAGCGCGCGTGCACATAAG+CGG - chr3_3:85264755-85264774 None:intergenic 60.0%
!! ATTGGTGCCGTGGCTGAGTC+TGG + chr3_3:85266695-85266714 Msa0480090:intron 60.0%
CCGTGGCTGAGTCTGGACTA+TGG + chr3_3:85266702-85266721 Msa0480090:intron 60.0%
GTGGGAAGGTCGTATGTGGC+TGG + chr3_3:85266759-85266778 Msa0480090:intron 60.0%
GCTCTGCAGGCCTTTGGATG+CGG - chr3_3:85269971-85269990 None:intergenic 60.0%
! AGAGTGTGTGTGTGGTGGGG+GGG + chr3_3:85271930-85271949 Msa0480090:intron 60.0%
!! CCCCGTCTATCGTCGACTCG+TGG - chr3_3:85260413-85260432 None:intergenic 65.0%
GGGGAAGGAGTGGGAGTCTG+TGG - chr3_3:85260646-85260665 None:intergenic 65.0%
AGCGCGCGTGCACATAAGCG+GGG - chr3_3:85264753-85264772 None:intergenic 65.0%
GAGCGCGCGTGCACATAAGC+GGG - chr3_3:85264754-85264773 None:intergenic 65.0%
! GAGTGTGTGTGTGGTGGGGG+GGG + chr3_3:85271931-85271950 Msa0480090:intron 65.0%
! AGTGTGTGTGTGGTGGGGGG+GGG + chr3_3:85271932-85271951 Msa0480090:intron 65.0%
! GTGTGTGTGTGGTGGGGGGG+GGG + chr3_3:85271933-85271952 Msa0480090:intron 70.0%
! TGTGTGTGTGGTGGGGGGGG+GGG + chr3_3:85271934-85271953 Msa0480090:intron 70.0%
! GTGTGTGTGGTGGGGGGGGG+GGG + chr3_3:85271935-85271954 Msa0480090:intron 75.0%
! TGTGTGTGGTGGGGGGGGGG+GGG + chr3_3:85271936-85271955 Msa0480090:intron 75.0%
!! GTGTGTGGTGGGGGGGGGGG+GGG + chr3_3:85271937-85271956 Msa0480090:intron 80.0%
!! TGTGTGGTGGGGGGGGGGGG+GGG + chr3_3:85271938-85271957 Msa0480090:intron 80.0%
!! GTGTGGTGGGGGGGGGGGGG+GGG + chr3_3:85271939-85271958 Msa0480090:intron 85.0%
!! TGTGGTGGGGGGGGGGGGGG+GGG + chr3_3:85271940-85271959 Msa0480090:intron 85.0%
!! GTGGTGGGGGGGGGGGGGGG+GGG + chr3_3:85271941-85271960 Msa0480090:intron 90.0%
! TGGTGGGGGGGGGGGGGGGG+GGG + chr3_3:85271942-85271961 Msa0480090:intron 90.0%
! GGTGGGGGGGGGGGGGGGGG+GGG + chr3_3:85271943-85271962 Msa0480090:intron 95.0%
! GTGGGGGGGGGGGGGGGGGG+GGG + chr3_3:85271944-85271963 Msa0480090:intron 95.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 85260358 85272925 85260358 ID=Msa0480090;Name=Msa0480090
chr3_3 mRNA 85260358 85272925 85260358 ID=Msa0480090-mRNA-1;Parent=Msa0480090;Name=Msa0480090-mRNA-1;_AED=0.11;_eAED=0.11;_QI=84|0.92|0.86|1|0.64|0.73|15|461|389
chr3_3 exon 85260358 85260488 85260358 ID=Msa0480090-mRNA-1:exon:24401;Parent=Msa0480090-mRNA-1
chr3_3 exon 85260564 85260677 85260564 ID=Msa0480090-mRNA-1:exon:24402;Parent=Msa0480090-mRNA-1
chr3_3 exon 85260766 85260853 85260766 ID=Msa0480090-mRNA-1:exon:24403;Parent=Msa0480090-mRNA-1
chr3_3 exon 85261313 85261354 85261313 ID=Msa0480090-mRNA-1:exon:24404;Parent=Msa0480090-mRNA-1
chr3_3 exon 85262040 85262129 85262040 ID=Msa0480090-mRNA-1:exon:24405;Parent=Msa0480090-mRNA-1
chr3_3 exon 85262234 85262356 85262234 ID=Msa0480090-mRNA-1:exon:24406;Parent=Msa0480090-mRNA-1
chr3_3 exon 85264033 85264104 85264033 ID=Msa0480090-mRNA-1:exon:24407;Parent=Msa0480090-mRNA-1
chr3_3 exon 85264339 85264451 85264339 ID=Msa0480090-mRNA-1:exon:24408;Parent=Msa0480090-mRNA-1
chr3_3 exon 85264551 85264558 85264551 ID=Msa0480090-mRNA-1:exon:24409;Parent=Msa0480090-mRNA-1
chr3_3 exon 85264669 85264727 85264669 ID=Msa0480090-mRNA-1:exon:24410;Parent=Msa0480090-mRNA-1
chr3_3 exon 85265788 85265844 85265788 ID=Msa0480090-mRNA-1:exon:24411;Parent=Msa0480090-mRNA-1
chr3_3 exon 85267504 85267550 85267504 ID=Msa0480090-mRNA-1:exon:24412;Parent=Msa0480090-mRNA-1
chr3_3 exon 85267680 85267761 85267680 ID=Msa0480090-mRNA-1:exon:24413;Parent=Msa0480090-mRNA-1
chr3_3 exon 85268652 85268741 85268652 ID=Msa0480090-mRNA-1:exon:24414;Parent=Msa0480090-mRNA-1
chr3_3 exon 85272327 85272925 85272327 ID=Msa0480090-mRNA-1:exon:24415;Parent=Msa0480090-mRNA-1
chr3_3 five_prime_UTR 85260358 85260441 85260358 ID=Msa0480090-mRNA-1:five_prime_utr;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85260442 85260488 85260442 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85260564 85260677 85260564 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85260766 85260853 85260766 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85261313 85261354 85261313 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85262040 85262129 85262040 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85262234 85262356 85262234 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85264033 85264104 85264033 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85264339 85264451 85264339 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85264551 85264558 85264551 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85264669 85264727 85264669 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85265788 85265844 85265788 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85267504 85267550 85267504 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85267680 85267761 85267680 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85268652 85268741 85268652 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 CDS 85272327 85272464 85272327 ID=Msa0480090-mRNA-1:cds;Parent=Msa0480090-mRNA-1
chr3_3 three_prime_UTR 85272465 85272925 85272465 ID=Msa0480090-mRNA-1:three_prime_utr;Parent=Msa0480090-mRNA-1
Gene Sequence

>Msa0480090

ATGGGTGTTTGTCATTACGCGGTTCCGTCATGCTTCGTCCCATCGCTGTCGTGTGCAGCTTCAACTCTCTTTCGCTCTCGCTTCAGACCCACCATTCGATGCTGCACCACTCTATCCGATACCTCTCCACAGACTCCCACTCCTTCCCCGACCTCTGTAAAGAAACGAGTTGTCTCCGGAGTTCAACCTACCGGTTCAATTCACCTTGGAAACTACTTCGGTGCCATCAAGAATTGGGTTGCCCTTCAGCATGTGTACGATACACTTTACTTCATTGTGGATCTGCATGCGATTACATTACCTCATGACTCACAACAATTATCTAAGGATACAAAGTCAACCGCAGCCATTTACCTGGCATGTGGGGTGGATCCTTCAAAGGCTTCAGTTTTTGTCCAGTCTCATGTCCGTGCACATGTAGAATTGATGTGGCTGCTAAGTTCTGTAACACCAATCGGCTGGCTAAACAGAATGATACAGTTTAAAGAGAAATCTCGCAAGGGGGGAGATGATGAAGTTGGGGTTGCTCTTTTGACTTATCCTGTTCTGATGGCTTCTGATATACTTCTATATCAGTCTGATTTTGTCCCTGTTGGTGAAGATCAAAAGCAACATTTGGAGTTGACCCGTGACTTAGCTGAGCGGGTTAATAATTTATACGGAGGAAGAAAGTGGAAGAAATTAGGCGGGCGAGGAGAGCCCCTTATACCTCCAACTGGAGCACGGATTATGTCCCTAACCGATGGCCTGTCGAAGATGTCAAAGTCTGCACCTTCTGATCAATCCAGAATCAATATTCTTGATCCTAAAGATCTTATAGCAAACAAGATCAAACGTTGCAAAACTGATTCATTTCCAAGCTTGGAAATCGACAATCCTGAAAGGCCTGAATGTAATAATCTTCTCTCTATATACCAGCTCGCTTCTGGAAAAACAAAAGAGGAAGTTGCGCATGAATGCCAAAACATGAACTGGGGCACATTCAAACCTCTTTTAACAGATGCCTTGATTGACCATTTGCAACCCATTCAGGTTCGCTATGAGGAACTCATGTCAGATTCAGGTTATTTAGATAAAGTATTAGGAGAAGGTGCTAAAAATGCAGCAGATATAGCGGATGCTACTCTTCATAATGTTTACCAAGCAATGGGATTTTCGAGGAGACAATGA
Protein sequence

>Msa0480090

MGVCHYAVPSCFVPSLSCAASTLFRSRFRPTIRCCTTLSDTSPQTPTPSPTSVKKRVVSGVQPTGSIHLGNYFGAIKNWVALQHVYDTLYFIVDLHAITLPHDSQQLSKDTKSTAAIYLACGVDPSKASVFVQSHVRAHVELMWLLSSVTPIGWLNRMIQFKEKSRKGGDDEVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRDLAERVNNLYGGRKWKKLGGRGEPLIPPTGARIMSLTDGLSKMSKSAPSDQSRINILDPKDLIANKIKRCKTDSFPSLEIDNPERPECNNLLSIYQLASGKTKEEVAHECQNMNWGTFKPLLTDALIDHLQPIQVRYEELMSDSGYLDKVLGEGAKNAADIADATLHNVYQAMGFSRRQ*