Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182120 | XP_024630870.1 | 83.817 | 482 | 48 | 2 | 14 | 480 | 187 | 653 | 0.0 | 816 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182120 | sp|O00370|LORF2_HUMAN | 23.333 | 480 | 313 | 10 | 27 | 461 | 384 | 853 | 4.25e-29 | 127 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182120 | A0A2Z6PFU2 | 56.055 | 512 | 191 | 1 | 12 | 489 | 222 | 733 | 0.0 | 606 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0182030 | Msa0182120 | 0.885835 | 5.770253e-72 | -8.615850e-47 |
| Msa0182120 | Msa0708610 | 0.909652 | 4.494656e-82 | -8.615850e-47 |
| Msa0182120 | Msa1394290 | 0.811944 | 5.433996e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182120 | MtrunA17_Chr1g0162511 | 78.351 | 291 | 63 | 0 | 190 | 480 | 1 | 291 | 8.52e-172 | 497 |
| Msa0182120 | MtrunA17_Chr2g0306281 | 54.595 | 370 | 168 | 0 | 107 | 476 | 38 | 407 | 1.17e-145 | 432 |
| Msa0182120 | MtrunA17_Chr5g0423361 | 80.000 | 245 | 49 | 0 | 236 | 480 | 1 | 245 | 1.94e-140 | 426 |
| Msa0182120 | MtrunA17_Chr1g0201701 | 92.414 | 145 | 8 | 1 | 471 | 615 | 43 | 184 | 4.46e-91 | 279 |
| Msa0182120 | MtrunA17_Chr4g0023831 | 34.038 | 473 | 282 | 12 | 12 | 479 | 926 | 1373 | 2.93e-71 | 250 |
| Msa0182120 | MtrunA17_Chr4g0006871 | 30.906 | 508 | 308 | 7 | 5 | 475 | 349 | 850 | 4.97e-64 | 229 |
| Msa0182120 | MtrunA17_Chr8g0341191 | 32.383 | 386 | 256 | 3 | 104 | 489 | 91 | 471 | 1.26e-61 | 219 |
| Msa0182120 | MtrunA17_Chr8g0357281 | 31.663 | 439 | 260 | 5 | 55 | 457 | 17 | 451 | 1.27e-61 | 219 |
| Msa0182120 | MtrunA17_Chr1g0162521 | 58.378 | 185 | 43 | 1 | 11 | 161 | 328 | 512 | 1.03e-58 | 205 |
| Msa0182120 | MtrunA17_Chr6g0480701 | 38.489 | 278 | 170 | 1 | 193 | 469 | 3 | 280 | 1.64e-58 | 209 |
| Msa0182120 | MtrunA17_Chr6g0450501 | 30.807 | 409 | 270 | 6 | 95 | 498 | 83 | 483 | 1.68e-58 | 207 |
| Msa0182120 | MtrunA17_Chr4g0020731 | 34.012 | 344 | 222 | 3 | 101 | 443 | 111 | 450 | 2.98e-58 | 208 |
| Msa0182120 | MtrunA17_Chr3g0085761 | 31.590 | 459 | 272 | 8 | 5 | 427 | 157 | 609 | 4.65e-57 | 205 |
| Msa0182120 | MtrunA17_Chr6g0452011 | 28.450 | 471 | 292 | 8 | 25 | 457 | 2 | 465 | 4.32e-56 | 196 |
| Msa0182120 | MtrunA17_Chr4g0075191 | 31.635 | 373 | 244 | 6 | 104 | 472 | 60 | 425 | 1.59e-54 | 197 |
| Msa0182120 | MtrunA17_Chr5g0408771 | 33.856 | 319 | 176 | 2 | 13 | 296 | 46 | 364 | 1.41e-52 | 185 |
| Msa0182120 | MtrunA17_Chr2g0332521 | 29.787 | 376 | 258 | 3 | 90 | 462 | 35 | 407 | 2.07e-50 | 187 |
| Msa0182120 | MtrunA17_Chr8g0359381 | 35.065 | 308 | 192 | 6 | 174 | 479 | 303 | 604 | 8.92e-47 | 177 |
| Msa0182120 | MtrunA17_Chr1g0209241 | 43.017 | 179 | 101 | 1 | 109 | 287 | 40 | 217 | 4.44e-44 | 157 |
| Msa0182120 | MtrunA17_Chr1g0204171 | 51.773 | 141 | 68 | 0 | 336 | 476 | 78 | 218 | 1.79e-42 | 157 |
| Msa0182120 | MtrunA17_Chr5g0411291 | 29.932 | 294 | 202 | 2 | 174 | 467 | 109 | 398 | 4.88e-41 | 159 |
| Msa0182120 | MtrunA17_Chr2g0295981 | 53.279 | 122 | 57 | 0 | 117 | 238 | 12 | 133 | 1.11e-40 | 144 |
| Msa0182120 | MtrunA17_Chr5g0431011 | 33.205 | 259 | 168 | 5 | 223 | 479 | 1 | 256 | 1.59e-34 | 139 |
| Msa0182120 | MtrunA17_Chr6g0469141 | 31.179 | 263 | 175 | 4 | 201 | 461 | 1 | 259 | 2.41e-33 | 128 |
| Msa0182120 | MtrunA17_Chr8g0374951 | 29.936 | 314 | 157 | 3 | 76 | 355 | 29 | 313 | 5.79e-33 | 129 |
| Msa0182120 | MtrunA17_Chr7g0250341 | 38.065 | 155 | 93 | 1 | 133 | 287 | 2 | 153 | 3.38e-31 | 119 |
| Msa0182120 | MtrunA17_Chr3g0144591 | 48.148 | 108 | 56 | 0 | 383 | 490 | 1 | 108 | 6.10e-29 | 121 |
| Msa0182120 | MtrunA17_Chr5g0430681 | 37.888 | 161 | 97 | 1 | 104 | 264 | 7 | 164 | 7.27e-29 | 112 |
| Msa0182120 | MtrunA17_Chr3g0079991 | 37.908 | 153 | 81 | 3 | 317 | 469 | 2 | 140 | 1.21e-25 | 109 |
| Msa0182120 | MtrunA17_Chr8g0361981 | 53.750 | 80 | 37 | 0 | 383 | 462 | 1 | 80 | 4.85e-24 | 99.0 |
| Msa0182120 | MtrunA17_Chr4g0002791 | 33.684 | 190 | 121 | 5 | 292 | 479 | 8 | 194 | 5.94e-22 | 99.4 |
| Msa0182120 | MtrunA17_Chr3g0085661 | 30.631 | 222 | 150 | 4 | 223 | 442 | 1 | 220 | 1.05e-21 | 99.0 |
| Msa0182120 | MtrunA17_Chr3g0083701 | 36.364 | 176 | 111 | 1 | 298 | 473 | 21 | 195 | 2.01e-21 | 93.6 |
| Msa0182120 | MtrunA17_Chr7g0220681 | 42.857 | 77 | 44 | 0 | 379 | 455 | 44 | 120 | 8.04e-16 | 73.9 |
| Msa0182120 | MtrunA17_Chr6g0451721 | 38.776 | 98 | 59 | 1 | 101 | 197 | 7 | 104 | 1.25e-15 | 73.2 |
| Msa0182120 | MtrunA17_Chr8g0392081 | 26.087 | 184 | 134 | 2 | 306 | 489 | 22 | 203 | 5.33e-15 | 77.4 |
| Msa0182120 | MtrunA17_Chr3g0087691 | 49.275 | 69 | 35 | 0 | 422 | 490 | 1 | 69 | 5.89e-15 | 78.2 |
| Msa0182120 | MtrunA17_Chr1g0156631 | 36.000 | 100 | 64 | 0 | 8 | 107 | 116 | 215 | 7.60e-13 | 69.3 |
| Msa0182120 | MtrunA17_Chr5g0430691 | 29.927 | 137 | 95 | 1 | 306 | 442 | 23 | 158 | 3.57e-11 | 65.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0182120 | AT5G09270.1 | 52.778 | 108 | 44 | 3 | 508 | 615 | 8 | 108 | 2.45e-28 | 109 |
| Msa0182120 | AT5G09270.2 | 52.778 | 108 | 44 | 3 | 508 | 615 | 8 | 108 | 2.45e-28 | 109 |
| Msa0182120 | ATMG01250.1 | 55.882 | 68 | 30 | 0 | 248 | 315 | 13 | 80 | 1.63e-19 | 85.1 |
| Msa0182120 | AT3G24255.7 | 30.263 | 152 | 105 | 1 | 306 | 457 | 8 | 158 | 3.16e-14 | 76.6 |
| Msa0182120 | AT3G24255.4 | 30.263 | 152 | 105 | 1 | 306 | 457 | 8 | 158 | 4.56e-14 | 75.5 |
| Msa0182120 | AT3G24255.5 | 30.263 | 152 | 105 | 1 | 306 | 457 | 8 | 158 | 4.56e-14 | 75.5 |
| Msa0182120 | AT4G20520.1 | 40.964 | 83 | 48 | 1 | 151 | 233 | 1 | 82 | 4.14e-13 | 71.6 |
Find 162 sgRNAs with CRISPR-Local
Find 418 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTCCTGCTGCAGGCTTTA+TGG | 0.092653 | 1_4:-70537418 | Msa0182120:CDS |
| TGAAGCTATTCTTACCAAAA+TGG | 0.165211 | 1_4:-70538508 | Msa0182120:CDS |
| GAATATCATGTTATTCTTAA+TGG | 0.184710 | 1_4:-70538435 | Msa0182120:CDS |
| TTTAGAATTAAACCCCATTT+TGG | 0.196521 | 1_4:+70538494 | None:intergenic |
| AAATGGGGTTTAATTCTAAA+TGG | 0.216312 | 1_4:-70538491 | Msa0182120:CDS |
| CTTATCTTAAGGATCGTATT+TGG | 0.220593 | 1_4:-70537978 | Msa0182120:CDS |
| ACAAACATTTCATCTCTTCT+TGG | 0.239749 | 1_4:-70538078 | Msa0182120:CDS |
| TATATGGCGGCTTTGGTCTT+TGG | 0.247259 | 1_4:-70537317 | Msa0182120:CDS |
| CTTGGTGTCTCTAATACTAT+TGG | 0.268833 | 1_4:-70538060 | Msa0182120:CDS |
| TCCATTATATGCGTTGTAAA+AGG | 0.278899 | 1_4:-70538605 | Msa0182120:CDS |
| TTAATTCTAAATGGATTTCT+TGG | 0.283553 | 1_4:-70538482 | Msa0182120:CDS |
| TCAGGGCCCGGAGACTTATT+TGG | 0.284590 | 1_4:+70538950 | None:intergenic |
| GGCCATTCCTTCTTACTGTA+TGG | 0.294094 | 1_4:-70537881 | Msa0182120:CDS |
| ATAGATATAGAAAGCTTCTT+AGG | 0.309898 | 1_4:-70537287 | Msa0182120:CDS |
| AATAAGAGAGAACTTCCTTT+AGG | 0.314877 | 1_4:+70538181 | None:intergenic |
| AGCTATCGTCAGCAAATAAA+AGG | 0.326555 | 1_4:+70538241 | None:intergenic |
| GAAGCTATTCTTACCAAAAT+GGG | 0.336824 | 1_4:-70538507 | Msa0182120:CDS |
| GGTTCCTATATTCTTGTATA+TGG | 0.337081 | 1_4:-70537333 | Msa0182120:CDS |
| ATTCTTGTATATGGCGGCTT+TGG | 0.347000 | 1_4:-70537324 | Msa0182120:CDS |
| TGTAAAAGGAAAGGCAAAAC+TGG | 0.351082 | 1_4:-70538591 | Msa0182120:CDS |
| TTCTGCCAAAGTGGTTGAAA+AGG | 0.353945 | 1_4:-70537178 | Msa0182120:CDS |
| CTTGGTCCTCACCAGTTTCC+AGG | 0.356142 | 1_4:+70537451 | None:intergenic |
| TCAGGGCAAGGTATTAATTA+TGG | 0.359736 | 1_4:-70538147 | Msa0182120:CDS |
| TGAACAAAGGCTGCCTGCTC+AGG | 0.360678 | 1_4:+70538672 | None:intergenic |
| AAACAGCTGCGTGATTCTTC+TGG | 0.362221 | 1_4:-70539166 | Msa0182120:CDS |
| TCTTATTATGAATCCGCATC+AGG | 0.365594 | 1_4:-70538165 | Msa0182120:CDS |
| GTATCTAGGACTTCCTTCTA+TGG | 0.368175 | 1_4:-70538028 | Msa0182120:CDS |
| TGCAGGCTTTATGGATTCAT+TGG | 0.369416 | 1_4:-70537409 | Msa0182120:CDS |
| CAGAAACTTATCCTTATGTA+TGG | 0.372733 | 1_4:-70537356 | Msa0182120:CDS |
| GGTAAGAATAGCTTCAAGAT+AGG | 0.375606 | 1_4:+70538515 | None:intergenic |
| ACGGTAGTCGTGGAATTAAC+TGG | 0.378700 | 1_4:-70537780 | Msa0182120:CDS |
| TTATGGATTCATTGGAAAAT+CGG | 0.384322 | 1_4:-70537401 | Msa0182120:CDS |
| GCACATTACACAAGGATATA+GGG | 0.385433 | 1_4:+70538760 | None:intergenic |
| GCTCTATAAAACTATCTCTA+AGG | 0.398749 | 1_4:-70538739 | Msa0182120:CDS |
| AGCACATTACACAAGGATAT+AGG | 0.399099 | 1_4:+70538759 | None:intergenic |
| ATTTCTGCATACCTTCCAAC+TGG | 0.404004 | 1_4:+70539323 | None:intergenic |
| TGCGTGATTCTTCTGGTAAC+TGG | 0.405822 | 1_4:-70539159 | Msa0182120:CDS |
| GTCTCAAGGGTGTCAACCTT+GGG | 0.406631 | 1_4:+70538798 | None:intergenic |
| CTGCTGCCTCGGCCAGGAAA+AGG | 0.408318 | 1_4:-70539201 | Msa0182120:CDS |
| TGATTTGCCATGTCCTTGGC+TGG | 0.408407 | 1_4:+70537519 | None:intergenic |
| AAGAAGCTTTCTATATCTAT+AGG | 0.413891 | 1_4:+70537290 | None:intergenic |
| TTGCTACGACCAACCATAGA+AGG | 0.415855 | 1_4:+70538015 | None:intergenic |
| GTCGGTGCCCCTCCTGCTGC+AGG | 0.419080 | 1_4:-70537426 | Msa0182120:CDS |
| CAGGAGGGGCACCGACTACT+TGG | 0.421600 | 1_4:+70537433 | None:intergenic |
| AAGTTCTGCAGCACCTATCC+TGG | 0.422828 | 1_4:-70537469 | Msa0182120:CDS |
| ACGGAGAGAGTGGGCATCCT+TGG | 0.426618 | 1_4:+70538373 | None:intergenic |
| AGATTGTTGCTTTGCAGAAA+AGG | 0.437082 | 1_4:+70538217 | None:intergenic |
| TTGAATTCAGCTTCAGAGAA+AGG | 0.437796 | 1_4:+70538995 | None:intergenic |
| ATTCTTAATGGAGATCGTAT+TGG | 0.439638 | 1_4:-70538423 | Msa0182120:CDS |
| GCCATTCCTTCTTACTGTAT+GGG | 0.443809 | 1_4:-70537880 | Msa0182120:CDS |
| AGGATAGGTGCTGCAGAACT+TGG | 0.446859 | 1_4:+70537471 | None:intergenic |
| ATTCGTAAGGTCATGCTTGA+TGG | 0.448015 | 1_4:-70539355 | None:intergenic |
| TCCATGCTGCTGCCTCGGCC+AGG | 0.457474 | 1_4:-70539207 | Msa0182120:CDS |
| CTAGATCTCTTTCACGTGTC+GGG | 0.460392 | 1_4:-70537933 | Msa0182120:CDS |
| GCAGCACCTATCCTGGAAAC+TGG | 0.465240 | 1_4:-70537462 | Msa0182120:CDS |
| ATTGGCTCTAGGAAGTATCT+AGG | 0.466158 | 1_4:-70538042 | Msa0182120:CDS |
| TCCGTCCTCTCATCAACAAA+TGG | 0.471220 | 1_4:-70538701 | Msa0182120:CDS |
| AAATATTGTTCTTGCTCCCA+AGG | 0.473598 | 1_4:-70538814 | Msa0182120:CDS |
| ATTTGTGGCGTTGAGTTCCA+TGG | 0.474558 | 1_4:+70538833 | None:intergenic |
| TCATCTCCTCGGTTCAATCA+AGG | 0.476293 | 1_4:-70539051 | Msa0182120:CDS |
| GCCGCCATATACAAGAATAT+AGG | 0.480158 | 1_4:+70537329 | None:intergenic |
| AGACCACGTTGAGGAGTGAT+AGG | 0.483007 | 1_4:+70538399 | None:intergenic |
| TGGTTGATTTGCCATGTCCT+TGG | 0.486730 | 1_4:+70537515 | None:intergenic |
| TGGAATTAACTGGATGCGTT+GGG | 0.488752 | 1_4:-70537770 | Msa0182120:CDS |
| ACTACGTGAGATGGTTGAAA+AGG | 0.493284 | 1_4:-70537232 | Msa0182120:CDS |
| AGCTTCTTAGGACAGAGGAC+AGG | 0.494425 | 1_4:-70537275 | Msa0182120:CDS |
| TATAGCCTTCAGTGCAAATA+CGG | 0.496025 | 1_4:-70538115 | Msa0182120:CDS |
| TACAGTAAGAAGGAATGGCC+TGG | 0.499482 | 1_4:+70537884 | None:intergenic |
| AGAAACTTATCCTTATGTAT+GGG | 0.501079 | 1_4:-70537355 | Msa0182120:CDS |
| TTCTAATAATTCTGCCAAAG+TGG | 0.501415 | 1_4:-70537187 | Msa0182120:CDS |
| TCTGCCAAAGTGGTTGAAAA+GGG | 0.502981 | 1_4:-70537177 | Msa0182120:CDS |
| CAAATGGATTTCTCCTGAGC+AGG | 0.503851 | 1_4:-70538685 | Msa0182120:CDS |
| AGTCTCAAGGGTGTCAACCT+TGG | 0.504774 | 1_4:+70538797 | None:intergenic |
| ATATAGGAACCCCATACATA+AGG | 0.508413 | 1_4:+70537345 | None:intergenic |
| CTAGGACTTCCTTCTATGGT+TGG | 0.509969 | 1_4:-70538024 | Msa0182120:CDS |
| ACCATGCTGCGAAGAGAAGA+TGG | 0.512065 | 1_4:+70539087 | None:intergenic |
| GGCGTTGAGTTCCATGGGCA+AGG | 0.515541 | 1_4:+70538839 | None:intergenic |
| TCCTATATTCTTGTATATGG+CGG | 0.516713 | 1_4:-70537330 | Msa0182120:CDS |
| GGAGTCTAGCTCCTTGCCCA+TGG | 0.520771 | 1_4:-70538850 | Msa0182120:intron |
| ATGTTGCAATGTAGGCTACT+TGG | 0.523428 | 1_4:+70537131 | None:intergenic |
| CATAAAGCCTGCAGCAGGAG+GGG | 0.525453 | 1_4:+70537419 | None:intergenic |
| GATCTCATCACAGAGGGAGG+TGG | 0.526150 | 1_4:+70537843 | None:intergenic |
| GTGGAATTAACTGGATGCGT+TGG | 0.526313 | 1_4:-70537771 | Msa0182120:CDS |
| TCCTCACCAGTTTCCAGGAT+AGG | 0.526596 | 1_4:+70537456 | None:intergenic |
| TCCATAAAGCCTGCAGCAGG+AGG | 0.530529 | 1_4:+70537417 | None:intergenic |
| ATCTCATCACAGAGGGAGGT+GGG | 0.531347 | 1_4:+70537844 | None:intergenic |
| GGGAGCAAGAACAATATTTG+TGG | 0.532302 | 1_4:+70538818 | None:intergenic |
| TTAGGACAGAGGACAGGGTA+CGG | 0.537011 | 1_4:-70537269 | Msa0182120:CDS |
| TCCATCTTCTCTTCGCAGCA+TGG | 0.537899 | 1_4:-70539088 | Msa0182120:CDS |
| CTTGATTAAATCAGTTGCCC+AGG | 0.537987 | 1_4:-70537902 | Msa0182120:CDS |
| CTCTATATCTTATGTGCCGA+GGG | 0.541711 | 1_4:-70538348 | Msa0182120:CDS |
| ACAGTAAGAAGGAATGGCCT+GGG | 0.543360 | 1_4:+70537885 | None:intergenic |
| GAATCCATAAAGCCTGCAGC+AGG | 0.543830 | 1_4:+70537414 | None:intergenic |
| ATTCTTCCATGCTGCTGCCT+CGG | 0.544805 | 1_4:-70539212 | Msa0182120:CDS |
| ATATAGAGATACGGAGAGAG+TGG | 0.545486 | 1_4:+70538363 | None:intergenic |
| TCCATTTGTTGATGAGAGGA+CGG | 0.548309 | 1_4:+70538700 | None:intergenic |
| GTAAAAGGAAAGGCAAAACT+GGG | 0.548509 | 1_4:-70538590 | Msa0182120:CDS |
| ATCTCTTTCACGTGTCGGGA+AGG | 0.549144 | 1_4:-70537929 | Msa0182120:CDS |
| CATCTCCTCGGTTCAATCAA+GGG | 0.549317 | 1_4:-70539050 | Msa0182120:CDS |
| TTTCTGCATACCTTCCAACT+GGG | 0.550315 | 1_4:+70539324 | None:intergenic |
| TAGGACAGAGGACAGGGTAC+GGG | 0.558112 | 1_4:-70537268 | Msa0182120:CDS |
| GAAATCCATTTGTTGATGAG+AGG | 0.558784 | 1_4:+70538696 | None:intergenic |
| AAGCCTTTGACAGTGTAAGT+TGG | 0.558914 | 1_4:-70538539 | Msa0182120:CDS |
| TCTCTAATACTATTGGCTCT+AGG | 0.560289 | 1_4:-70538053 | Msa0182120:CDS |
| TTTGTGGCGTTGAGTTCCAT+GGG | 0.562605 | 1_4:+70538834 | None:intergenic |
| AGAGTCCGTATTTGCACTGA+AGG | 0.564363 | 1_4:+70538110 | None:intergenic |
| GGAAGGAATCTCAGAAGATG+TGG | 0.565631 | 1_4:+70537152 | None:intergenic |
| GCCCATACAGTAAGAAGGAA+TGG | 0.567851 | 1_4:+70537879 | None:intergenic |
| GAGCTTCATGGTAAATTGCA+CGG | 0.568593 | 1_4:-70538300 | Msa0182120:CDS |
| GAAACTTATCCTTATGTATG+GGG | 0.570070 | 1_4:-70537354 | Msa0182120:CDS |
| GCTAGATCTCTTTCACGTGT+CGG | 0.570107 | 1_4:-70537934 | Msa0182120:CDS |
| AAAGCGCCCATACAGTAAGA+AGG | 0.575136 | 1_4:+70537874 | None:intergenic |
| CATCACGGATAATGCTCTAA+CGG | 0.575275 | 1_4:-70538640 | Msa0182120:CDS |
| ATTAATACCTTGCCCTGATG+CGG | 0.577371 | 1_4:+70538152 | None:intergenic |
| GAAGGTCCTTCATAGTCTCA+AGG | 0.578511 | 1_4:+70538784 | None:intergenic |
| TTCGATCTCATCACAGAGGG+AGG | 0.578992 | 1_4:+70537840 | None:intergenic |
| TATATGCGTTGTAAAAGGAA+AGG | 0.579878 | 1_4:-70538600 | Msa0182120:CDS |
| TCTCTATATCTTATGTGCCG+AGG | 0.580296 | 1_4:-70538349 | Msa0182120:CDS |
| GGACCAACTTACACTGTCAA+AGG | 0.584406 | 1_4:+70538536 | None:intergenic |
| AAGCTATTCTTACCAAAATG+GGG | 0.585972 | 1_4:-70538506 | Msa0182120:CDS |
| GCACATAAGATATAGAGATA+CGG | 0.587289 | 1_4:+70538354 | None:intergenic |
| CTTATTATGAATCCGCATCA+GGG | 0.588850 | 1_4:-70538164 | Msa0182120:CDS |
| GAGGACGGAGGCTGTTGGCA+AGG | 0.589673 | 1_4:+70538715 | None:intergenic |
| TGTTCATTCTCGCTCCATCA+CGG | 0.590593 | 1_4:-70538655 | Msa0182120:CDS |
| TCAAGCAAGACTACGTGAGA+TGG | 0.592566 | 1_4:-70537241 | Msa0182120:CDS |
| TATGAATCCGCATCAGGGCA+AGG | 0.598222 | 1_4:-70538159 | Msa0182120:CDS |
| CCGAGGAGATGATGTGTTGG+TGG | 0.602744 | 1_4:+70539062 | None:intergenic |
| CGTTAGAGCATTATCCGTGA+TGG | 0.604687 | 1_4:+70538641 | None:intergenic |
| TATGGTTGGTCGTAGCAAGA+AGG | 0.607307 | 1_4:-70538010 | Msa0182120:CDS |
| TATAGAGATACGGAGAGAGT+GGG | 0.609025 | 1_4:+70538364 | None:intergenic |
| TGACACCCTTGAGACTATGA+AGG | 0.612501 | 1_4:-70538790 | Msa0182120:CDS |
| TCCTGGCCGAGGCAGCAGCA+TGG | 0.616991 | 1_4:+70539206 | None:intergenic |
| CCATAAAGCCTGCAGCAGGA+GGG | 0.618716 | 1_4:+70537418 | None:intergenic |
| TAGCTGGAACACTCCAGCCA+AGG | 0.621030 | 1_4:-70537532 | Msa0182120:CDS |
| AAGGTCCTTCATAGTCTCAA+GGG | 0.622112 | 1_4:+70538785 | None:intergenic |
| CCACCAACACATCATCTCCT+CGG | 0.622580 | 1_4:-70539062 | Msa0182120:CDS |
| GATGAGAGGACGGAGGCTGT+TGG | 0.625028 | 1_4:+70538710 | None:intergenic |
| GATAATGGAAGAGAGTCCCT+CGG | 0.632037 | 1_4:+70538332 | None:intergenic |
| AGGTGAAGTAATCACGCACA+AGG | 0.636333 | 1_4:+70539110 | None:intergenic |
| GAACACTCCAGCCAAGGACA+TGG | 0.636957 | 1_4:-70537526 | Msa0182120:CDS |
| GCTTCTTAGGACAGAGGACA+GGG | 0.639564 | 1_4:-70537274 | Msa0182120:CDS |
| AATAAAAGGTGACTAACTCG+TGG | 0.640289 | 1_4:+70538255 | None:intergenic |
| TCTGCATACCTTCCAACTGG+GGG | 0.640437 | 1_4:+70539326 | None:intergenic |
| ACCTATCCTGGAAACTGGTG+AGG | 0.641675 | 1_4:-70537457 | Msa0182120:CDS |
| GAACCGAGGAGATGATGTGT+TGG | 0.645688 | 1_4:+70539059 | None:intergenic |
| TGCAATGTAGGCTACTTGGA+AGG | 0.646398 | 1_4:+70537135 | None:intergenic |
| TTCTGCATACCTTCCAACTG+GGG | 0.647546 | 1_4:+70539325 | None:intergenic |
| TTTATAGAGCACATTACACA+AGG | 0.648741 | 1_4:+70538752 | None:intergenic |
| TAGAAAGCTTCTTAGGACAG+AGG | 0.663471 | 1_4:-70537280 | Msa0182120:CDS |
| ACTGGTGAGGACCAAGTAGT+CGG | 0.664340 | 1_4:-70537444 | Msa0182120:CDS |
| TGTTACCCTTGATTGAACCG+AGG | 0.668291 | 1_4:+70539045 | None:intergenic |
| TACACAAGGATATAGGGCGA+AGG | 0.668515 | 1_4:+70538766 | None:intergenic |
| CCTCAACGTGGTCTACGCCA+AGG | 0.673159 | 1_4:-70538390 | Msa0182120:CDS |
| AATCACGCACAAGGGCACAA+AGG | 0.676243 | 1_4:+70539119 | None:intergenic |
| GGTGAAGTAATCACGCACAA+GGG | 0.697913 | 1_4:+70539111 | None:intergenic |
| ATTTGTTGATGAGAGGACGG+AGG | 0.713545 | 1_4:+70538703 | None:intergenic |
| CCTTGGCGTAGACCACGTTG+AGG | 0.715125 | 1_4:+70538390 | None:intergenic |
| GGTCCTATCACTCCTCAACG+TGG | 0.715909 | 1_4:-70538402 | Msa0182120:CDS |
| AATAACATGATATTCGACAG+AGG | 0.722469 | 1_4:+70538443 | None:intergenic |
| GATGGAGCGAGAATGAACAA+AGG | 0.723860 | 1_4:+70538659 | None:intergenic |
| ATGCTGCGAAGAGAAGATGG+AGG | 0.747967 | 1_4:+70539090 | None:intergenic |
| TAAAAGGAAAGGCAAAACTG+GGG | 0.761744 | 1_4:-70538589 | Msa0182120:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCTAAAATCTATTAGTTAG+CGG | - | chr1_4:70537235-70537254 | Msa0182120:CDS | 20.0% |
| !!! | TTAATTCTAAATGGATTTCT+TGG | - | chr1_4:70538007-70538026 | Msa0182120:CDS | 20.0% |
| !! | GAATATCATGTTATTCTTAA+TGG | - | chr1_4:70538054-70538073 | Msa0182120:CDS | 20.0% |
| !! | TTATGGATTCATTGAAAAAT+CGG | - | chr1_4:70538917-70538936 | Msa0182120:intron | 20.0% |
| !!! | ATCTAAAATCTATTAGTTAG+CGG | - | chr1_4:70537235-70537254 | Msa0182120:CDS | 20.0% |
| !!! | TTAATTCTAAATGGATTTCT+TGG | - | chr1_4:70538007-70538026 | Msa0182120:CDS | 20.0% |
| !! | GAATATCATGTTATTCTTAA+TGG | - | chr1_4:70538054-70538073 | Msa0182120:CDS | 20.0% |
| !! | TTATGGATTCATTGAAAAAT+CGG | - | chr1_4:70538917-70538936 | Msa0182120:intron | 20.0% |
| ! | TCTTGCTTATTTAATTCTTC+AGG | - | chr1_4:70537190-70537209 | Msa0182120:CDS | 25.0% |
| !! | TATAGTATTTTTCCTTTTCC+TGG | + | chr1_4:70537303-70537322 | None:intergenic | 25.0% |
| !! | TGGATTTCATTCCAAAATTT+TGG | + | chr1_4:70537586-70537605 | None:intergenic | 25.0% |
| !!! | TTTAGAATTAAACCCCATTT+TGG | + | chr1_4:70537998-70538017 | None:intergenic | 25.0% |
| ! | AAATGGGGTTTAATTCTAAA+TGG | - | chr1_4:70537998-70538017 | Msa0182120:CDS | 25.0% |
| !! | AAGCTCATAGTTTTTGATAA+TGG | + | chr1_4:70538175-70538194 | None:intergenic | 25.0% |
| !! | AAATCATGAACTCCTTTTAT+TGG | - | chr1_4:70538673-70538692 | Msa0182120:CDS | 25.0% |
| !! | AATCATGAACTCCTTTTATT+GGG | - | chr1_4:70538674-70538693 | Msa0182120:CDS | 25.0% |
| ! | ATCAAAAAATCATAGATAGC+TGG | - | chr1_4:70538941-70538960 | Msa0182120:intron | 25.0% |
| ! | TTATGGATTCATTGGAAAAT+CGG | - | chr1_4:70539088-70539107 | Msa0182120:CDS | 25.0% |
| ! | AGAAACTTATCCTTATGTAT+GGG | - | chr1_4:70539134-70539153 | Msa0182120:CDS | 25.0% |
| ! | AAGAAGCTTTCTATATCTAT+AGG | + | chr1_4:70539202-70539221 | None:intergenic | 25.0% |
| ! | ATAGATATAGAAAGCTTCTT+AGG | - | chr1_4:70539202-70539221 | Msa0182120:CDS | 25.0% |
| ! | TCTTGCTTATTTAATTCTTC+AGG | - | chr1_4:70537190-70537209 | Msa0182120:CDS | 25.0% |
| !! | TATAGTATTTTTCCTTTTCC+TGG | + | chr1_4:70537303-70537322 | None:intergenic | 25.0% |
| !! | TGGATTTCATTCCAAAATTT+TGG | + | chr1_4:70537586-70537605 | None:intergenic | 25.0% |
| !!! | TTTAGAATTAAACCCCATTT+TGG | + | chr1_4:70537998-70538017 | None:intergenic | 25.0% |
| ! | AAATGGGGTTTAATTCTAAA+TGG | - | chr1_4:70537998-70538017 | Msa0182120:CDS | 25.0% |
| !! | AAGCTCATAGTTTTTGATAA+TGG | + | chr1_4:70538175-70538194 | None:intergenic | 25.0% |
| !! | AAATCATGAACTCCTTTTAT+TGG | - | chr1_4:70538673-70538692 | Msa0182120:CDS | 25.0% |
| !! | AATCATGAACTCCTTTTATT+GGG | - | chr1_4:70538674-70538693 | Msa0182120:CDS | 25.0% |
| ! | ATCAAAAAATCATAGATAGC+TGG | - | chr1_4:70538941-70538960 | Msa0182120:intron | 25.0% |
| ! | TTATGGATTCATTGGAAAAT+CGG | - | chr1_4:70539088-70539107 | Msa0182120:CDS | 25.0% |
| ! | AGAAACTTATCCTTATGTAT+GGG | - | chr1_4:70539134-70539153 | Msa0182120:CDS | 25.0% |
| ! | AAGAAGCTTTCTATATCTAT+AGG | + | chr1_4:70539202-70539221 | None:intergenic | 25.0% |
| ! | ATAGATATAGAAAGCTTCTT+AGG | - | chr1_4:70539202-70539221 | Msa0182120:CDS | 25.0% |
| TGCTTATTTAATTCTTCAGG+AGG | - | chr1_4:70537193-70537212 | Msa0182120:CDS | 30.0% | |
| AAAATCTATTAGTTAGCGGA+TGG | - | chr1_4:70537239-70537258 | Msa0182120:CDS | 30.0% | |
| ATTTGGATGCATGCTAAAAA+TGG | + | chr1_4:70537525-70537544 | None:intergenic | 30.0% | |
| !! | CCAAAATTTTGGAAAAAAGC+CGG | + | chr1_4:70537575-70537594 | None:intergenic | 30.0% |
| TTTATAGAGCACATTACACA+AGG | + | chr1_4:70537740-70537759 | None:intergenic | 30.0% | |
| GCTCTATAAAACTATCTCTA+AGG | - | chr1_4:70537750-70537769 | Msa0182120:CDS | 30.0% | |
| TCCATTATATGCGTTGTAAA+AGG | - | chr1_4:70537884-70537903 | Msa0182120:CDS | 30.0% | |
| ! | TCCTTTTACAACGCATATAA+TGG | + | chr1_4:70537888-70537907 | None:intergenic | 30.0% |
| TATATGCGTTGTAAAAGGAA+AGG | - | chr1_4:70537889-70537908 | Msa0182120:CDS | 30.0% | |
| TGAAGCTATTCTTACCAAAA+TGG | - | chr1_4:70537981-70538000 | Msa0182120:CDS | 30.0% | |
| GAAGCTATTCTTACCAAAAT+GGG | - | chr1_4:70537982-70538001 | Msa0182120:CDS | 30.0% | |
| AAGCTATTCTTACCAAAATG+GGG | - | chr1_4:70537983-70538002 | Msa0182120:CDS | 30.0% | |
| AATAACATGATATTCGACAG+AGG | + | chr1_4:70538049-70538068 | None:intergenic | 30.0% | |
| ATTCTTAATGGAGATCGTAT+TGG | - | chr1_4:70538066-70538085 | Msa0182120:CDS | 30.0% | |
| GCACATAAGATATAGAGATA+CGG | + | chr1_4:70538138-70538157 | None:intergenic | 30.0% | |
| ATCAAAAACTATGAGCTTCA+TGG | - | chr1_4:70538177-70538196 | Msa0182120:CDS | 30.0% | |
| AATAAGAGAGAACTTCCTTT+AGG | + | chr1_4:70538311-70538330 | None:intergenic | 30.0% | |
| ACAAACATTTCATCTCTTCT+TGG | - | chr1_4:70538411-70538430 | Msa0182120:CDS | 30.0% | |
| ! | GGCAATCTTTTCTTATCTTA+AGG | - | chr1_4:70538500-70538519 | Msa0182120:CDS | 30.0% |
| CTTATCTTAAGGATCGTATT+TGG | - | chr1_4:70538511-70538530 | Msa0182120:CDS | 30.0% | |
| TTTGGAAAAATTGCAAAGCA+TGG | - | chr1_4:70538529-70538548 | Msa0182120:CDS | 30.0% | |
| ! | ATCATGAACTCCTTTTATTG+GGG | - | chr1_4:70538675-70538694 | Msa0182120:CDS | 30.0% |
| !!! | CTTTTTAGAACCCCAATAAA+AGG | + | chr1_4:70538688-70538707 | None:intergenic | 30.0% |
| !! | TATTGGGGTTCTAAAAAGAA+CGG | - | chr1_4:70538690-70538709 | Msa0182120:CDS | 30.0% |
| TTAACTCACCACAAAAGTTT+GGG | - | chr1_4:70538747-70538766 | Msa0182120:CDS | 30.0% | |
| !!! | GCTTGTTGCTTTTCATTATT+TGG | + | chr1_4:70538997-70539016 | None:intergenic | 30.0% |
| CAGAAACTTATCCTTATGTA+TGG | - | chr1_4:70539133-70539152 | Msa0182120:CDS | 30.0% | |
| GAAACTTATCCTTATGTATG+GGG | - | chr1_4:70539135-70539154 | Msa0182120:CDS | 30.0% | |
| GGTTCCTATATTCTTGTATA+TGG | - | chr1_4:70539156-70539175 | Msa0182120:CDS | 30.0% | |
| TCCTATATTCTTGTATATGG+CGG | - | chr1_4:70539159-70539178 | Msa0182120:CDS | 30.0% | |
| TTCTAATAATTCTGCCAAAG+TGG | - | chr1_4:70539302-70539321 | Msa0182120:intron | 30.0% | |
| TGCTTATTTAATTCTTCAGG+AGG | - | chr1_4:70537193-70537212 | Msa0182120:CDS | 30.0% | |
| AAAATCTATTAGTTAGCGGA+TGG | - | chr1_4:70537239-70537258 | Msa0182120:CDS | 30.0% | |
| ATTTGGATGCATGCTAAAAA+TGG | + | chr1_4:70537525-70537544 | None:intergenic | 30.0% | |
| !! | CCAAAATTTTGGAAAAAAGC+CGG | + | chr1_4:70537575-70537594 | None:intergenic | 30.0% |
| TTTATAGAGCACATTACACA+AGG | + | chr1_4:70537740-70537759 | None:intergenic | 30.0% | |
| GCTCTATAAAACTATCTCTA+AGG | - | chr1_4:70537750-70537769 | Msa0182120:CDS | 30.0% | |
| TCCATTATATGCGTTGTAAA+AGG | - | chr1_4:70537884-70537903 | Msa0182120:CDS | 30.0% | |
| ! | TCCTTTTACAACGCATATAA+TGG | + | chr1_4:70537888-70537907 | None:intergenic | 30.0% |
| TATATGCGTTGTAAAAGGAA+AGG | - | chr1_4:70537889-70537908 | Msa0182120:CDS | 30.0% | |
| TGAAGCTATTCTTACCAAAA+TGG | - | chr1_4:70537981-70538000 | Msa0182120:CDS | 30.0% | |
| GAAGCTATTCTTACCAAAAT+GGG | - | chr1_4:70537982-70538001 | Msa0182120:CDS | 30.0% | |
| AAGCTATTCTTACCAAAATG+GGG | - | chr1_4:70537983-70538002 | Msa0182120:CDS | 30.0% | |
| AATAACATGATATTCGACAG+AGG | + | chr1_4:70538049-70538068 | None:intergenic | 30.0% | |
| ATTCTTAATGGAGATCGTAT+TGG | - | chr1_4:70538066-70538085 | Msa0182120:CDS | 30.0% | |
| GCACATAAGATATAGAGATA+CGG | + | chr1_4:70538138-70538157 | None:intergenic | 30.0% | |
| ATCAAAAACTATGAGCTTCA+TGG | - | chr1_4:70538177-70538196 | Msa0182120:CDS | 30.0% | |
| AATAAGAGAGAACTTCCTTT+AGG | + | chr1_4:70538311-70538330 | None:intergenic | 30.0% | |
| ACAAACATTTCATCTCTTCT+TGG | - | chr1_4:70538411-70538430 | Msa0182120:CDS | 30.0% | |
| ! | GGCAATCTTTTCTTATCTTA+AGG | - | chr1_4:70538500-70538519 | Msa0182120:CDS | 30.0% |
| CTTATCTTAAGGATCGTATT+TGG | - | chr1_4:70538511-70538530 | Msa0182120:CDS | 30.0% | |
| TTTGGAAAAATTGCAAAGCA+TGG | - | chr1_4:70538529-70538548 | Msa0182120:CDS | 30.0% | |
| ! | ATCATGAACTCCTTTTATTG+GGG | - | chr1_4:70538675-70538694 | Msa0182120:CDS | 30.0% |
| !!! | CTTTTTAGAACCCCAATAAA+AGG | + | chr1_4:70538688-70538707 | None:intergenic | 30.0% |
| !! | TATTGGGGTTCTAAAAAGAA+CGG | - | chr1_4:70538690-70538709 | Msa0182120:CDS | 30.0% |
| TTAACTCACCACAAAAGTTT+GGG | - | chr1_4:70538747-70538766 | Msa0182120:CDS | 30.0% | |
| !!! | GCTTGTTGCTTTTCATTATT+TGG | + | chr1_4:70538997-70539016 | None:intergenic | 30.0% |
| CAGAAACTTATCCTTATGTA+TGG | - | chr1_4:70539133-70539152 | Msa0182120:CDS | 30.0% | |
| GAAACTTATCCTTATGTATG+GGG | - | chr1_4:70539135-70539154 | Msa0182120:CDS | 30.0% | |
| GGTTCCTATATTCTTGTATA+TGG | - | chr1_4:70539156-70539175 | Msa0182120:CDS | 30.0% | |
| TCCTATATTCTTGTATATGG+CGG | - | chr1_4:70539159-70539178 | Msa0182120:CDS | 30.0% | |
| TTCTAATAATTCTGCCAAAG+TGG | - | chr1_4:70539302-70539321 | Msa0182120:intron | 30.0% | |
| TTCTTCAGGAGGAATCTTAT+TGG | - | chr1_4:70537204-70537223 | Msa0182120:CDS | 35.0% | |
| TTGAATTCAGCTTCAGAGAA+AGG | + | chr1_4:70537497-70537516 | None:intergenic | 35.0% | |
| !!! | CCGGCTTTTTTCCAAAATTT+TGG | - | chr1_4:70537572-70537591 | Msa0182120:intron | 35.0% |
| CCACGATGATTTATTTACCT+CGG | - | chr1_4:70537603-70537622 | Msa0182120:intron | 35.0% | |
| AAATATTGTTCTTGCTCCCA+AGG | - | chr1_4:70537675-70537694 | Msa0182120:intron | 35.0% | |
| GCACATTACACAAGGATATA+GGG | + | chr1_4:70537732-70537751 | None:intergenic | 35.0% | |
| AGCACATTACACAAGGATAT+AGG | + | chr1_4:70537733-70537752 | None:intergenic | 35.0% | |
| ! | GAAATCCATTTGTTGATGAG+AGG | + | chr1_4:70537796-70537815 | None:intergenic | 35.0% |
| TGTAAAAGGAAAGGCAAAAC+TGG | - | chr1_4:70537898-70537917 | Msa0182120:CDS | 35.0% | |
| GTAAAAGGAAAGGCAAAACT+GGG | - | chr1_4:70537899-70537918 | Msa0182120:CDS | 35.0% | |
| TAAAAGGAAAGGCAAAACTG+GGG | - | chr1_4:70537900-70537919 | Msa0182120:CDS | 35.0% | |
| GGTAAGAATAGCTTCAAGAT+AGG | + | chr1_4:70537977-70537996 | None:intergenic | 35.0% | |
| AATAAAAGGTGACTAACTCG+TGG | + | chr1_4:70538237-70538256 | None:intergenic | 35.0% | |
| AGCTATCGTCAGCAAATAAA+AGG | + | chr1_4:70538251-70538270 | None:intergenic | 35.0% | |
| !! | AGATTGTTGCTTTGCAGAAA+AGG | + | chr1_4:70538275-70538294 | None:intergenic | 35.0% |
| CTCAAAAACGCAAAACCTAA+AGG | - | chr1_4:70538293-70538312 | Msa0182120:CDS | 35.0% | |
| TCTTATTATGAATCCGCATC+AGG | - | chr1_4:70538324-70538343 | Msa0182120:CDS | 35.0% | |
| CTTATTATGAATCCGCATCA+GGG | - | chr1_4:70538325-70538344 | Msa0182120:CDS | 35.0% | |
| ! | TCAGGGCAAGGTATTAATTA+TGG | - | chr1_4:70538342-70538361 | Msa0182120:CDS | 35.0% |
| TATAGCCTTCAGTGCAAATA+CGG | - | chr1_4:70538374-70538393 | Msa0182120:CDS | 35.0% | |
| !! | CTTGGTGTCTCTAATACTAT+TGG | - | chr1_4:70538429-70538448 | Msa0182120:CDS | 35.0% |
| !! | TCTCTAATACTATTGGCTCT+AGG | - | chr1_4:70538436-70538455 | Msa0182120:CDS | 35.0% |
| !! | TTTTTCGATCTCATCACAGA+GGG | + | chr1_4:70538655-70538674 | None:intergenic | 35.0% |
| !!! | TTTTTTCGATCTCATCACAG+AGG | + | chr1_4:70538656-70538675 | None:intergenic | 35.0% |
| GTTAACTCACCACAAAAGTT+TGG | - | chr1_4:70538746-70538765 | Msa0182120:CDS | 35.0% | |
| ATATAGGAACCCCATACATA+AGG | + | chr1_4:70539147-70539166 | None:intergenic | 35.0% | |
| TTCTTCAGGAGGAATCTTAT+TGG | - | chr1_4:70537204-70537223 | Msa0182120:CDS | 35.0% | |
| TTGAATTCAGCTTCAGAGAA+AGG | + | chr1_4:70537497-70537516 | None:intergenic | 35.0% | |
| !!! | CCGGCTTTTTTCCAAAATTT+TGG | - | chr1_4:70537572-70537591 | Msa0182120:intron | 35.0% |
| CCACGATGATTTATTTACCT+CGG | - | chr1_4:70537603-70537622 | Msa0182120:intron | 35.0% | |
| AAATATTGTTCTTGCTCCCA+AGG | - | chr1_4:70537675-70537694 | Msa0182120:intron | 35.0% | |
| GCACATTACACAAGGATATA+GGG | + | chr1_4:70537732-70537751 | None:intergenic | 35.0% | |
| AGCACATTACACAAGGATAT+AGG | + | chr1_4:70537733-70537752 | None:intergenic | 35.0% | |
| ! | GAAATCCATTTGTTGATGAG+AGG | + | chr1_4:70537796-70537815 | None:intergenic | 35.0% |
| TGTAAAAGGAAAGGCAAAAC+TGG | - | chr1_4:70537898-70537917 | Msa0182120:CDS | 35.0% | |
| GTAAAAGGAAAGGCAAAACT+GGG | - | chr1_4:70537899-70537918 | Msa0182120:CDS | 35.0% | |
| TAAAAGGAAAGGCAAAACTG+GGG | - | chr1_4:70537900-70537919 | Msa0182120:CDS | 35.0% | |
| GGTAAGAATAGCTTCAAGAT+AGG | + | chr1_4:70537977-70537996 | None:intergenic | 35.0% | |
| AATAAAAGGTGACTAACTCG+TGG | + | chr1_4:70538237-70538256 | None:intergenic | 35.0% | |
| AGCTATCGTCAGCAAATAAA+AGG | + | chr1_4:70538251-70538270 | None:intergenic | 35.0% | |
| !! | AGATTGTTGCTTTGCAGAAA+AGG | + | chr1_4:70538275-70538294 | None:intergenic | 35.0% |
| CTCAAAAACGCAAAACCTAA+AGG | - | chr1_4:70538293-70538312 | Msa0182120:CDS | 35.0% | |
| TCTTATTATGAATCCGCATC+AGG | - | chr1_4:70538324-70538343 | Msa0182120:CDS | 35.0% | |
| CTTATTATGAATCCGCATCA+GGG | - | chr1_4:70538325-70538344 | Msa0182120:CDS | 35.0% | |
| ! | TCAGGGCAAGGTATTAATTA+TGG | - | chr1_4:70538342-70538361 | Msa0182120:CDS | 35.0% |
| TATAGCCTTCAGTGCAAATA+CGG | - | chr1_4:70538374-70538393 | Msa0182120:CDS | 35.0% | |
| !! | CTTGGTGTCTCTAATACTAT+TGG | - | chr1_4:70538429-70538448 | Msa0182120:CDS | 35.0% |
| !! | TCTCTAATACTATTGGCTCT+AGG | - | chr1_4:70538436-70538455 | Msa0182120:CDS | 35.0% |
| !! | TTTTTCGATCTCATCACAGA+GGG | + | chr1_4:70538655-70538674 | None:intergenic | 35.0% |
| !!! | TTTTTTCGATCTCATCACAG+AGG | + | chr1_4:70538656-70538675 | None:intergenic | 35.0% |
| GTTAACTCACCACAAAAGTT+TGG | - | chr1_4:70538746-70538765 | Msa0182120:CDS | 35.0% | |
| ATATAGGAACCCCATACATA+AGG | + | chr1_4:70539147-70539166 | None:intergenic | 35.0% | |
| TTTCTGCATACCTTCCAACT+GGG | + | chr1_4:70537168-70537187 | None:intergenic | 40.0% | |
| ATTTCTGCATACCTTCCAAC+TGG | + | chr1_4:70537169-70537188 | None:intergenic | 40.0% | |
| CATGCATCCAAATAAGTCTC+CGG | - | chr1_4:70537532-70537551 | Msa0182120:CDS | 40.0% | |
| ATGCATCCAAATAAGTCTCC+GGG | - | chr1_4:70537533-70537552 | Msa0182120:CDS | 40.0% | |
| CCGAGGTAAATAAATCATCG+TGG | + | chr1_4:70537606-70537625 | None:intergenic | 40.0% | |
| TATTTACCTCGGCTCTATCT+TGG | - | chr1_4:70537614-70537633 | Msa0182120:intron | 40.0% | |
| GGGAGCAAGAACAATATTTG+TGG | + | chr1_4:70537674-70537693 | None:intergenic | 40.0% | |
| AAGGTCCTTCATAGTCTCAA+GGG | + | chr1_4:70537707-70537726 | None:intergenic | 40.0% | |
| ! | TCCATTTGTTGATGAGAGGA+CGG | + | chr1_4:70537792-70537811 | None:intergenic | 40.0% |
| CATCACGGATAATGCTCTAA+CGG | - | chr1_4:70537849-70537868 | Msa0182120:CDS | 40.0% | |
| AAGCCTTTGACAGTGTAAGT+TGG | - | chr1_4:70537950-70537969 | Msa0182120:CDS | 40.0% | |
| TATAGAGATACGGAGAGAGT+GGG | + | chr1_4:70538128-70538147 | None:intergenic | 40.0% | |
| ATATAGAGATACGGAGAGAG+TGG | + | chr1_4:70538129-70538148 | None:intergenic | 40.0% | |
| TCTCTATATCTTATGTGCCG+AGG | - | chr1_4:70538140-70538159 | Msa0182120:CDS | 40.0% | |
| CTCTATATCTTATGTGCCGA+GGG | - | chr1_4:70538141-70538160 | Msa0182120:CDS | 40.0% | |
| GAGCTTCATGGTAAATTGCA+CGG | - | chr1_4:70538189-70538208 | Msa0182120:CDS | 40.0% | |
| ATTAATACCTTGCCCTGATG+CGG | + | chr1_4:70538340-70538359 | None:intergenic | 40.0% | |
| !! | ATTGGCTCTAGGAAGTATCT+AGG | - | chr1_4:70538447-70538466 | Msa0182120:CDS | 40.0% |
| ! | GTATCTAGGACTTCCTTCTA+TGG | - | chr1_4:70538461-70538480 | Msa0182120:CDS | 40.0% |
| CTTGATTAAATCAGTTGCCC+AGG | - | chr1_4:70538587-70538606 | Msa0182120:CDS | 40.0% | |
| GCCATTCCTTCTTACTGTAT+GGG | - | chr1_4:70538609-70538628 | Msa0182120:CDS | 40.0% | |
| TCTAAAAAGAACGGTAGTCG+TGG | - | chr1_4:70538699-70538718 | Msa0182120:CDS | 40.0% | |
| TGGAATTAACTGGATGCGTT+GGG | - | chr1_4:70538719-70538738 | Msa0182120:CDS | 40.0% | |
| ! | TGCAGGCTTTATGGATTCAT+TGG | - | chr1_4:70539080-70539099 | Msa0182120:CDS | 40.0% |
| GCCGCCATATACAAGAATAT+AGG | + | chr1_4:70539163-70539182 | None:intergenic | 40.0% | |
| ATTCTTGTATATGGCGGCTT+TGG | - | chr1_4:70539165-70539184 | Msa0182120:CDS | 40.0% | |
| TAGAAAGCTTCTTAGGACAG+AGG | - | chr1_4:70539209-70539228 | Msa0182120:CDS | 40.0% | |
| ACTACGTGAGATGGTTGAAA+AGG | - | chr1_4:70539257-70539276 | Msa0182120:intron | 40.0% | |
| TTCTGCCAAAGTGGTTGAAA+AGG | - | chr1_4:70539311-70539330 | Msa0182120:intron | 40.0% | |
| TCTGCCAAAGTGGTTGAAAA+GGG | - | chr1_4:70539312-70539331 | Msa0182120:intron | 40.0% | |
| TTTCTGCATACCTTCCAACT+GGG | + | chr1_4:70537168-70537187 | None:intergenic | 40.0% | |
| ATTTCTGCATACCTTCCAAC+TGG | + | chr1_4:70537169-70537188 | None:intergenic | 40.0% | |
| CATGCATCCAAATAAGTCTC+CGG | - | chr1_4:70537532-70537551 | Msa0182120:CDS | 40.0% | |
| ATGCATCCAAATAAGTCTCC+GGG | - | chr1_4:70537533-70537552 | Msa0182120:CDS | 40.0% | |
| CCGAGGTAAATAAATCATCG+TGG | + | chr1_4:70537606-70537625 | None:intergenic | 40.0% | |
| TATTTACCTCGGCTCTATCT+TGG | - | chr1_4:70537614-70537633 | Msa0182120:intron | 40.0% | |
| GGGAGCAAGAACAATATTTG+TGG | + | chr1_4:70537674-70537693 | None:intergenic | 40.0% | |
| AAGGTCCTTCATAGTCTCAA+GGG | + | chr1_4:70537707-70537726 | None:intergenic | 40.0% | |
| ! | TCCATTTGTTGATGAGAGGA+CGG | + | chr1_4:70537792-70537811 | None:intergenic | 40.0% |
| CATCACGGATAATGCTCTAA+CGG | - | chr1_4:70537849-70537868 | Msa0182120:CDS | 40.0% | |
| AAGCCTTTGACAGTGTAAGT+TGG | - | chr1_4:70537950-70537969 | Msa0182120:CDS | 40.0% | |
| TATAGAGATACGGAGAGAGT+GGG | + | chr1_4:70538128-70538147 | None:intergenic | 40.0% | |
| ATATAGAGATACGGAGAGAG+TGG | + | chr1_4:70538129-70538148 | None:intergenic | 40.0% | |
| TCTCTATATCTTATGTGCCG+AGG | - | chr1_4:70538140-70538159 | Msa0182120:CDS | 40.0% | |
| CTCTATATCTTATGTGCCGA+GGG | - | chr1_4:70538141-70538160 | Msa0182120:CDS | 40.0% | |
| GAGCTTCATGGTAAATTGCA+CGG | - | chr1_4:70538189-70538208 | Msa0182120:CDS | 40.0% | |
| ATTAATACCTTGCCCTGATG+CGG | + | chr1_4:70538340-70538359 | None:intergenic | 40.0% | |
| !! | ATTGGCTCTAGGAAGTATCT+AGG | - | chr1_4:70538447-70538466 | Msa0182120:CDS | 40.0% |
| ! | GTATCTAGGACTTCCTTCTA+TGG | - | chr1_4:70538461-70538480 | Msa0182120:CDS | 40.0% |
| CTTGATTAAATCAGTTGCCC+AGG | - | chr1_4:70538587-70538606 | Msa0182120:CDS | 40.0% | |
| GCCATTCCTTCTTACTGTAT+GGG | - | chr1_4:70538609-70538628 | Msa0182120:CDS | 40.0% | |
| TCTAAAAAGAACGGTAGTCG+TGG | - | chr1_4:70538699-70538718 | Msa0182120:CDS | 40.0% | |
| TGGAATTAACTGGATGCGTT+GGG | - | chr1_4:70538719-70538738 | Msa0182120:CDS | 40.0% | |
| ! | TGCAGGCTTTATGGATTCAT+TGG | - | chr1_4:70539080-70539099 | Msa0182120:CDS | 40.0% |
| GCCGCCATATACAAGAATAT+AGG | + | chr1_4:70539163-70539182 | None:intergenic | 40.0% | |
| ATTCTTGTATATGGCGGCTT+TGG | - | chr1_4:70539165-70539184 | Msa0182120:CDS | 40.0% | |
| TAGAAAGCTTCTTAGGACAG+AGG | - | chr1_4:70539209-70539228 | Msa0182120:CDS | 40.0% | |
| ACTACGTGAGATGGTTGAAA+AGG | - | chr1_4:70539257-70539276 | Msa0182120:intron | 40.0% | |
| TTCTGCCAAAGTGGTTGAAA+AGG | - | chr1_4:70539311-70539330 | Msa0182120:intron | 40.0% | |
| TCTGCCAAAGTGGTTGAAAA+GGG | - | chr1_4:70539312-70539331 | Msa0182120:intron | 40.0% | |
| TTCTGCATACCTTCCAACTG+GGG | + | chr1_4:70537167-70537186 | None:intergenic | 45.0% | |
| ! | ATTTTTCCTTTTCCTGGCCG+AGG | + | chr1_4:70537297-70537316 | None:intergenic | 45.0% |
| AAACAGCTGCGTGATTCTTC+TGG | - | chr1_4:70537323-70537342 | Msa0182120:CDS | 45.0% | |
| TGCGTGATTCTTCTGGTAAC+TGG | - | chr1_4:70537330-70537349 | Msa0182120:CDS | 45.0% | |
| GGTGAAGTAATCACGCACAA+GGG | + | chr1_4:70537381-70537400 | None:intergenic | 45.0% | |
| AGGTGAAGTAATCACGCACA+AGG | + | chr1_4:70537382-70537401 | None:intergenic | 45.0% | |
| TCATCTCCTCGGTTCAATCA+AGG | - | chr1_4:70537438-70537457 | Msa0182120:CDS | 45.0% | |
| CATCTCCTCGGTTCAATCAA+GGG | - | chr1_4:70537439-70537458 | Msa0182120:CDS | 45.0% | |
| TGTTACCCTTGATTGAACCG+AGG | + | chr1_4:70537447-70537466 | None:intergenic | 45.0% | |
| AAGCCGGATTAAGTCTGTCA+GGG | + | chr1_4:70537559-70537578 | None:intergenic | 45.0% | |
| AAAGCCGGATTAAGTCTGTC+AGG | + | chr1_4:70537560-70537579 | None:intergenic | 45.0% | |
| ! | TTTGTGGCGTTGAGTTCCAT+GGG | + | chr1_4:70537658-70537677 | None:intergenic | 45.0% |
| ! | ATTTGTGGCGTTGAGTTCCA+TGG | + | chr1_4:70537659-70537678 | None:intergenic | 45.0% |
| TGACACCCTTGAGACTATGA+AGG | - | chr1_4:70537699-70537718 | Msa0182120:intron | 45.0% | |
| GAAGGTCCTTCATAGTCTCA+AGG | + | chr1_4:70537708-70537727 | None:intergenic | 45.0% | |
| TACACAAGGATATAGGGCGA+AGG | + | chr1_4:70537726-70537745 | None:intergenic | 45.0% | |
| ! | ATTTGTTGATGAGAGGACGG+AGG | + | chr1_4:70537789-70537808 | None:intergenic | 45.0% |
| TCCGTCCTCTCATCAACAAA+TGG | - | chr1_4:70537788-70537807 | Msa0182120:CDS | 45.0% | |
| ! | CAAATGGATTTCTCCTGAGC+AGG | - | chr1_4:70537804-70537823 | Msa0182120:CDS | 45.0% |
| GATGGAGCGAGAATGAACAA+AGG | + | chr1_4:70537833-70537852 | None:intergenic | 45.0% | |
| TGTTCATTCTCGCTCCATCA+CGG | - | chr1_4:70537834-70537853 | Msa0182120:CDS | 45.0% | |
| ! | CGTTAGAGCATTATCCGTGA+TGG | + | chr1_4:70537851-70537870 | None:intergenic | 45.0% |
| GGACCAACTTACACTGTCAA+AGG | + | chr1_4:70537956-70537975 | None:intergenic | 45.0% | |
| !! | GATAATGGAAGAGAGTCCCT+CGG | + | chr1_4:70538160-70538179 | None:intergenic | 45.0% |
| AGAGTCCGTATTTGCACTGA+AGG | + | chr1_4:70538382-70538401 | None:intergenic | 45.0% | |
| CTAGGACTTCCTTCTATGGT+TGG | - | chr1_4:70538465-70538484 | Msa0182120:CDS | 45.0% | |
| TTGCTACGACCAACCATAGA+AGG | + | chr1_4:70538477-70538496 | None:intergenic | 45.0% | |
| ! | TATGGTTGGTCGTAGCAAGA+AGG | - | chr1_4:70538479-70538498 | Msa0182120:CDS | 45.0% |
| GCTAGATCTCTTTCACGTGT+CGG | - | chr1_4:70538555-70538574 | Msa0182120:CDS | 45.0% | |
| CTAGATCTCTTTCACGTGTC+GGG | - | chr1_4:70538556-70538575 | Msa0182120:CDS | 45.0% | |
| ACAGTAAGAAGGAATGGCCT+GGG | + | chr1_4:70538607-70538626 | None:intergenic | 45.0% | |
| TACAGTAAGAAGGAATGGCC+TGG | + | chr1_4:70538608-70538627 | None:intergenic | 45.0% | |
| GGCCATTCCTTCTTACTGTA+TGG | - | chr1_4:70538608-70538627 | Msa0182120:CDS | 45.0% | |
| GCCCATACAGTAAGAAGGAA+TGG | + | chr1_4:70538613-70538632 | None:intergenic | 45.0% | |
| ! | AAAGCGCCCATACAGTAAGA+AGG | + | chr1_4:70538618-70538637 | None:intergenic | 45.0% |
| ACGGTAGTCGTGGAATTAAC+TGG | - | chr1_4:70538709-70538728 | Msa0182120:CDS | 45.0% | |
| GTGGAATTAACTGGATGCGT+TGG | - | chr1_4:70538718-70538737 | Msa0182120:CDS | 45.0% | |
| ACTCACCACAAAAGTTTGGG+TGG | - | chr1_4:70538750-70538769 | Msa0182120:CDS | 45.0% | |
| ! | NGAGTCCACCCAAACTTTTG+TGG | + | chr1_4:70538758-70538777 | None:intergenic | 45.0% |
| CTCTTCTGCTAAGGGCTTTA+TGG | - | chr1_4:70538900-70538919 | Msa0182120:intron | 45.0% | |
| !! | TGGTTGATTTGCCATGTCCT+TGG | + | chr1_4:70538977-70538996 | None:intergenic | 45.0% |
| ! | TATATGGCGGCTTTGGTCTT+TGG | - | chr1_4:70539172-70539191 | Msa0182120:CDS | 45.0% |
| TCAAGCAAGACTACGTGAGA+TGG | - | chr1_4:70539248-70539267 | Msa0182120:intron | 45.0% | |
| ! | GGAACCCTTTTCAACCACTT+TGG | + | chr1_4:70539319-70539338 | None:intergenic | 45.0% |
| GGAAGGAATCTCAGAAGATG+TGG | + | chr1_4:70539340-70539359 | None:intergenic | 45.0% | |
| TTCTGCATACCTTCCAACTG+GGG | + | chr1_4:70537167-70537186 | None:intergenic | 45.0% | |
| ! | ATTTTTCCTTTTCCTGGCCG+AGG | + | chr1_4:70537297-70537316 | None:intergenic | 45.0% |
| AAACAGCTGCGTGATTCTTC+TGG | - | chr1_4:70537323-70537342 | Msa0182120:CDS | 45.0% | |
| TGCGTGATTCTTCTGGTAAC+TGG | - | chr1_4:70537330-70537349 | Msa0182120:CDS | 45.0% | |
| GGTGAAGTAATCACGCACAA+GGG | + | chr1_4:70537381-70537400 | None:intergenic | 45.0% | |
| AGGTGAAGTAATCACGCACA+AGG | + | chr1_4:70537382-70537401 | None:intergenic | 45.0% | |
| TCATCTCCTCGGTTCAATCA+AGG | - | chr1_4:70537438-70537457 | Msa0182120:CDS | 45.0% | |
| CATCTCCTCGGTTCAATCAA+GGG | - | chr1_4:70537439-70537458 | Msa0182120:CDS | 45.0% | |
| TGTTACCCTTGATTGAACCG+AGG | + | chr1_4:70537447-70537466 | None:intergenic | 45.0% | |
| AAGCCGGATTAAGTCTGTCA+GGG | + | chr1_4:70537559-70537578 | None:intergenic | 45.0% | |
| AAAGCCGGATTAAGTCTGTC+AGG | + | chr1_4:70537560-70537579 | None:intergenic | 45.0% | |
| ! | TTTGTGGCGTTGAGTTCCAT+GGG | + | chr1_4:70537658-70537677 | None:intergenic | 45.0% |
| ! | ATTTGTGGCGTTGAGTTCCA+TGG | + | chr1_4:70537659-70537678 | None:intergenic | 45.0% |
| TGACACCCTTGAGACTATGA+AGG | - | chr1_4:70537699-70537718 | Msa0182120:intron | 45.0% | |
| GAAGGTCCTTCATAGTCTCA+AGG | + | chr1_4:70537708-70537727 | None:intergenic | 45.0% | |
| TACACAAGGATATAGGGCGA+AGG | + | chr1_4:70537726-70537745 | None:intergenic | 45.0% | |
| ! | ATTTGTTGATGAGAGGACGG+AGG | + | chr1_4:70537789-70537808 | None:intergenic | 45.0% |
| TCCGTCCTCTCATCAACAAA+TGG | - | chr1_4:70537788-70537807 | Msa0182120:CDS | 45.0% | |
| ! | CAAATGGATTTCTCCTGAGC+AGG | - | chr1_4:70537804-70537823 | Msa0182120:CDS | 45.0% |
| GATGGAGCGAGAATGAACAA+AGG | + | chr1_4:70537833-70537852 | None:intergenic | 45.0% | |
| TGTTCATTCTCGCTCCATCA+CGG | - | chr1_4:70537834-70537853 | Msa0182120:CDS | 45.0% | |
| ! | CGTTAGAGCATTATCCGTGA+TGG | + | chr1_4:70537851-70537870 | None:intergenic | 45.0% |
| GGACCAACTTACACTGTCAA+AGG | + | chr1_4:70537956-70537975 | None:intergenic | 45.0% | |
| !! | GATAATGGAAGAGAGTCCCT+CGG | + | chr1_4:70538160-70538179 | None:intergenic | 45.0% |
| AGAGTCCGTATTTGCACTGA+AGG | + | chr1_4:70538382-70538401 | None:intergenic | 45.0% | |
| CTAGGACTTCCTTCTATGGT+TGG | - | chr1_4:70538465-70538484 | Msa0182120:CDS | 45.0% | |
| TTGCTACGACCAACCATAGA+AGG | + | chr1_4:70538477-70538496 | None:intergenic | 45.0% | |
| ! | TATGGTTGGTCGTAGCAAGA+AGG | - | chr1_4:70538479-70538498 | Msa0182120:CDS | 45.0% |
| GCTAGATCTCTTTCACGTGT+CGG | - | chr1_4:70538555-70538574 | Msa0182120:CDS | 45.0% | |
| CTAGATCTCTTTCACGTGTC+GGG | - | chr1_4:70538556-70538575 | Msa0182120:CDS | 45.0% | |
| ACAGTAAGAAGGAATGGCCT+GGG | + | chr1_4:70538607-70538626 | None:intergenic | 45.0% | |
| TACAGTAAGAAGGAATGGCC+TGG | + | chr1_4:70538608-70538627 | None:intergenic | 45.0% | |
| GGCCATTCCTTCTTACTGTA+TGG | - | chr1_4:70538608-70538627 | Msa0182120:CDS | 45.0% | |
| GCCCATACAGTAAGAAGGAA+TGG | + | chr1_4:70538613-70538632 | None:intergenic | 45.0% | |
| ! | AAAGCGCCCATACAGTAAGA+AGG | + | chr1_4:70538618-70538637 | None:intergenic | 45.0% |
| ACGGTAGTCGTGGAATTAAC+TGG | - | chr1_4:70538709-70538728 | Msa0182120:CDS | 45.0% | |
| GTGGAATTAACTGGATGCGT+TGG | - | chr1_4:70538718-70538737 | Msa0182120:CDS | 45.0% | |
| ACTCACCACAAAAGTTTGGG+TGG | - | chr1_4:70538750-70538769 | Msa0182120:CDS | 45.0% | |
| ! | NGAGTCCACCCAAACTTTTG+TGG | + | chr1_4:70538758-70538777 | None:intergenic | 45.0% |
| CTCTTCTGCTAAGGGCTTTA+TGG | - | chr1_4:70538900-70538919 | Msa0182120:intron | 45.0% | |
| !! | TGGTTGATTTGCCATGTCCT+TGG | + | chr1_4:70538977-70538996 | None:intergenic | 45.0% |
| ! | TATATGGCGGCTTTGGTCTT+TGG | - | chr1_4:70539172-70539191 | Msa0182120:CDS | 45.0% |
| TCAAGCAAGACTACGTGAGA+TGG | - | chr1_4:70539248-70539267 | Msa0182120:intron | 45.0% | |
| ! | GGAACCCTTTTCAACCACTT+TGG | + | chr1_4:70539319-70539338 | None:intergenic | 45.0% |
| GGAAGGAATCTCAGAAGATG+TGG | + | chr1_4:70539340-70539359 | None:intergenic | 45.0% | |
| TCTGCATACCTTCCAACTGG+GGG | + | chr1_4:70537166-70537185 | None:intergenic | 50.0% | |
| ATTCTTCCATGCTGCTGCCT+CGG | - | chr1_4:70537277-70537296 | Msa0182120:CDS | 50.0% | |
| ! | AATCACGCACAAGGGCACAA+AGG | + | chr1_4:70537373-70537392 | None:intergenic | 50.0% |
| ATGCTGCGAAGAGAAGATGG+AGG | + | chr1_4:70537402-70537421 | None:intergenic | 50.0% | |
| TCCATCTTCTCTTCGCAGCA+TGG | - | chr1_4:70537401-70537420 | Msa0182120:CDS | 50.0% | |
| ACCATGCTGCGAAGAGAAGA+TGG | + | chr1_4:70537405-70537424 | None:intergenic | 50.0% | |
| CCACCAACACATCATCTCCT+CGG | - | chr1_4:70537427-70537446 | Msa0182120:CDS | 50.0% | |
| GAACCGAGGAGATGATGTGT+TGG | + | chr1_4:70537433-70537452 | None:intergenic | 50.0% | |
| !! | GTCTCAAGGGTGTCAACCTT+GGG | + | chr1_4:70537694-70537713 | None:intergenic | 50.0% |
| !! | AGTCTCAAGGGTGTCAACCT+TGG | + | chr1_4:70537695-70537714 | None:intergenic | 50.0% |
| AGACCACGTTGAGGAGTGAT+AGG | + | chr1_4:70538093-70538112 | None:intergenic | 50.0% | |
| TATGAATCCGCATCAGGGCA+AGG | - | chr1_4:70538330-70538349 | Msa0182120:CDS | 50.0% | |
| ATCTCTTTCACGTGTCGGGA+AGG | - | chr1_4:70538560-70538579 | Msa0182120:CDS | 50.0% | |
| ATCTCATCACAGAGGGAGGT+GGG | + | chr1_4:70538648-70538667 | None:intergenic | 50.0% | |
| TTCGATCTCATCACAGAGGG+AGG | + | chr1_4:70538652-70538671 | None:intergenic | 50.0% | |
| ! | TGATTTGCCATGTCCTTGGC+TGG | + | chr1_4:70538973-70538992 | None:intergenic | 50.0% |
| ! | AGGATAGGTGCTGCAGAACT+TGG | + | chr1_4:70539021-70539040 | None:intergenic | 50.0% |
| AAGTTCTGCAGCACCTATCC+TGG | - | chr1_4:70539020-70539039 | Msa0182120:CDS | 50.0% | |
| ACCTATCCTGGAAACTGGTG+AGG | - | chr1_4:70539032-70539051 | Msa0182120:CDS | 50.0% | |
| TCCTCACCAGTTTCCAGGAT+AGG | + | chr1_4:70539036-70539055 | None:intergenic | 50.0% | |
| ACTGGTGAGGACCAAGTAGT+CGG | - | chr1_4:70539045-70539064 | Msa0182120:CDS | 50.0% | |
| GAATCCATAAAGCCTGCAGC+AGG | + | chr1_4:70539078-70539097 | None:intergenic | 50.0% | |
| AGCTTCTTAGGACAGAGGAC+AGG | - | chr1_4:70539214-70539233 | Msa0182120:CDS | 50.0% | |
| GCTTCTTAGGACAGAGGACA+GGG | - | chr1_4:70539215-70539234 | Msa0182120:CDS | 50.0% | |
| TTAGGACAGAGGACAGGGTA+CGG | - | chr1_4:70539220-70539239 | Msa0182120:CDS | 50.0% | |
| TCTGCATACCTTCCAACTGG+GGG | + | chr1_4:70537166-70537185 | None:intergenic | 50.0% | |
| ATTCTTCCATGCTGCTGCCT+CGG | - | chr1_4:70537277-70537296 | Msa0182120:CDS | 50.0% | |
| ! | AATCACGCACAAGGGCACAA+AGG | + | chr1_4:70537373-70537392 | None:intergenic | 50.0% |
| ATGCTGCGAAGAGAAGATGG+AGG | + | chr1_4:70537402-70537421 | None:intergenic | 50.0% | |
| TCCATCTTCTCTTCGCAGCA+TGG | - | chr1_4:70537401-70537420 | Msa0182120:CDS | 50.0% | |
| ACCATGCTGCGAAGAGAAGA+TGG | + | chr1_4:70537405-70537424 | None:intergenic | 50.0% | |
| CCACCAACACATCATCTCCT+CGG | - | chr1_4:70537427-70537446 | Msa0182120:CDS | 50.0% | |
| GAACCGAGGAGATGATGTGT+TGG | + | chr1_4:70537433-70537452 | None:intergenic | 50.0% | |
| !! | GTCTCAAGGGTGTCAACCTT+GGG | + | chr1_4:70537694-70537713 | None:intergenic | 50.0% |
| !! | AGTCTCAAGGGTGTCAACCT+TGG | + | chr1_4:70537695-70537714 | None:intergenic | 50.0% |
| AGACCACGTTGAGGAGTGAT+AGG | + | chr1_4:70538093-70538112 | None:intergenic | 50.0% | |
| TATGAATCCGCATCAGGGCA+AGG | - | chr1_4:70538330-70538349 | Msa0182120:CDS | 50.0% | |
| ATCTCTTTCACGTGTCGGGA+AGG | - | chr1_4:70538560-70538579 | Msa0182120:CDS | 50.0% | |
| ATCTCATCACAGAGGGAGGT+GGG | + | chr1_4:70538648-70538667 | None:intergenic | 50.0% | |
| TTCGATCTCATCACAGAGGG+AGG | + | chr1_4:70538652-70538671 | None:intergenic | 50.0% | |
| ! | TGATTTGCCATGTCCTTGGC+TGG | + | chr1_4:70538973-70538992 | None:intergenic | 50.0% |
| ! | AGGATAGGTGCTGCAGAACT+TGG | + | chr1_4:70539021-70539040 | None:intergenic | 50.0% |
| AAGTTCTGCAGCACCTATCC+TGG | - | chr1_4:70539020-70539039 | Msa0182120:CDS | 50.0% | |
| ACCTATCCTGGAAACTGGTG+AGG | - | chr1_4:70539032-70539051 | Msa0182120:CDS | 50.0% | |
| TCCTCACCAGTTTCCAGGAT+AGG | + | chr1_4:70539036-70539055 | None:intergenic | 50.0% | |
| ACTGGTGAGGACCAAGTAGT+CGG | - | chr1_4:70539045-70539064 | Msa0182120:CDS | 50.0% | |
| GAATCCATAAAGCCTGCAGC+AGG | + | chr1_4:70539078-70539097 | None:intergenic | 50.0% | |
| AGCTTCTTAGGACAGAGGAC+AGG | - | chr1_4:70539214-70539233 | Msa0182120:CDS | 50.0% | |
| GCTTCTTAGGACAGAGGACA+GGG | - | chr1_4:70539215-70539234 | Msa0182120:CDS | 50.0% | |
| TTAGGACAGAGGACAGGGTA+CGG | - | chr1_4:70539220-70539239 | Msa0182120:CDS | 50.0% | |
| CCGAGGAGATGATGTGTTGG+TGG | + | chr1_4:70537430-70537449 | None:intergenic | 55.0% | |
| TCAGGGCCCGGAGACTTATT+TGG | + | chr1_4:70537542-70537561 | None:intergenic | 55.0% | |
| GGATTAAGTCTGTCAGGGCC+CGG | + | chr1_4:70537554-70537573 | None:intergenic | 55.0% | |
| GGGCCCTGACAGACTTAATC+CGG | - | chr1_4:70537553-70537572 | Msa0182120:intron | 55.0% | |
| TACCTCGGCTCTATCTTGGC+TGG | - | chr1_4:70537618-70537637 | Msa0182120:intron | 55.0% | |
| TGAACAAAGGCTGCCTGCTC+AGG | + | chr1_4:70537820-70537839 | None:intergenic | 55.0% | |
| GGTCCTATCACTCCTCAACG+TGG | - | chr1_4:70538087-70538106 | Msa0182120:CDS | 55.0% | |
| GATCTCATCACAGAGGGAGG+TGG | + | chr1_4:70538649-70538668 | None:intergenic | 55.0% | |
| AGTCGGTGGCTCTTCTGCTA+AGG | - | chr1_4:70538891-70538910 | Msa0182120:intron | 55.0% | |
| GTCGGTGGCTCTTCTGCTAA+GGG | - | chr1_4:70538892-70538911 | Msa0182120:intron | 55.0% | |
| TAGCTGGAACACTCCAGCCA+AGG | - | chr1_4:70538957-70538976 | Msa0182120:intron | 55.0% | |
| GAACACTCCAGCCAAGGACA+TGG | - | chr1_4:70538963-70538982 | Msa0182120:intron | 55.0% | |
| GCAGCACCTATCCTGGAAAC+TGG | - | chr1_4:70539027-70539046 | Msa0182120:CDS | 55.0% | |
| CTTGGTCCTCACCAGTTTCC+AGG | + | chr1_4:70539041-70539060 | None:intergenic | 55.0% | |
| CATAAAGCCTGCAGCAGGAG+GGG | + | chr1_4:70539073-70539092 | None:intergenic | 55.0% | |
| CCATAAAGCCTGCAGCAGGA+GGG | + | chr1_4:70539074-70539093 | None:intergenic | 55.0% | |
| TCCATAAAGCCTGCAGCAGG+AGG | + | chr1_4:70539075-70539094 | None:intergenic | 55.0% | |
| TAGGACAGAGGACAGGGTAC+GGG | - | chr1_4:70539221-70539240 | Msa0182120:CDS | 55.0% | |
| CCGAGGAGATGATGTGTTGG+TGG | + | chr1_4:70537430-70537449 | None:intergenic | 55.0% | |
| TCAGGGCCCGGAGACTTATT+TGG | + | chr1_4:70537542-70537561 | None:intergenic | 55.0% | |
| GGATTAAGTCTGTCAGGGCC+CGG | + | chr1_4:70537554-70537573 | None:intergenic | 55.0% | |
| GGGCCCTGACAGACTTAATC+CGG | - | chr1_4:70537553-70537572 | Msa0182120:intron | 55.0% | |
| TACCTCGGCTCTATCTTGGC+TGG | - | chr1_4:70537618-70537637 | Msa0182120:intron | 55.0% | |
| TGAACAAAGGCTGCCTGCTC+AGG | + | chr1_4:70537820-70537839 | None:intergenic | 55.0% | |
| GGTCCTATCACTCCTCAACG+TGG | - | chr1_4:70538087-70538106 | Msa0182120:CDS | 55.0% | |
| GATCTCATCACAGAGGGAGG+TGG | + | chr1_4:70538649-70538668 | None:intergenic | 55.0% | |
| AGTCGGTGGCTCTTCTGCTA+AGG | - | chr1_4:70538891-70538910 | Msa0182120:intron | 55.0% | |
| GTCGGTGGCTCTTCTGCTAA+GGG | - | chr1_4:70538892-70538911 | Msa0182120:intron | 55.0% | |
| TAGCTGGAACACTCCAGCCA+AGG | - | chr1_4:70538957-70538976 | Msa0182120:intron | 55.0% | |
| GAACACTCCAGCCAAGGACA+TGG | - | chr1_4:70538963-70538982 | Msa0182120:intron | 55.0% | |
| GCAGCACCTATCCTGGAAAC+TGG | - | chr1_4:70539027-70539046 | Msa0182120:CDS | 55.0% | |
| CTTGGTCCTCACCAGTTTCC+AGG | + | chr1_4:70539041-70539060 | None:intergenic | 55.0% | |
| CATAAAGCCTGCAGCAGGAG+GGG | + | chr1_4:70539073-70539092 | None:intergenic | 55.0% | |
| CCATAAAGCCTGCAGCAGGA+GGG | + | chr1_4:70539074-70539093 | None:intergenic | 55.0% | |
| TCCATAAAGCCTGCAGCAGG+AGG | + | chr1_4:70539075-70539094 | None:intergenic | 55.0% | |
| TAGGACAGAGGACAGGGTAC+GGG | - | chr1_4:70539221-70539240 | Msa0182120:CDS | 55.0% | |
| ! | TGATGGTAGCGACCCCCAGT+TGG | - | chr1_4:70537151-70537170 | Msa0182120:CDS | 60.0% |
| CTCCAGCCAAGATAGAGCCG+AGG | + | chr1_4:70537623-70537642 | None:intergenic | 60.0% | |
| ! | GGAGTCTAGCTCCTTGCCCA+TGG | - | chr1_4:70537639-70537658 | Msa0182120:intron | 60.0% |
| ! | GGCGTTGAGTTCCATGGGCA+AGG | + | chr1_4:70537653-70537672 | None:intergenic | 60.0% |
| GATGAGAGGACGGAGGCTGT+TGG | + | chr1_4:70537782-70537801 | None:intergenic | 60.0% | |
| CCTTGGCGTAGACCACGTTG+AGG | + | chr1_4:70538102-70538121 | None:intergenic | 60.0% | |
| CCTCAACGTGGTCTACGCCA+AGG | - | chr1_4:70538099-70538118 | Msa0182120:CDS | 60.0% | |
| ACGGAGAGAGTGGGCATCCT+TGG | + | chr1_4:70538119-70538138 | None:intergenic | 60.0% | |
| GGCGAGGATCAAGTAGTCGG+TGG | - | chr1_4:70538877-70538896 | Msa0182120:intron | 60.0% | |
| CCCTCCTGCTGCAGGCTTTA+TGG | - | chr1_4:70539071-70539090 | Msa0182120:CDS | 60.0% | |
| ! | TGATGGTAGCGACCCCCAGT+TGG | - | chr1_4:70537151-70537170 | Msa0182120:CDS | 60.0% |
| CTCCAGCCAAGATAGAGCCG+AGG | + | chr1_4:70537623-70537642 | None:intergenic | 60.0% | |
| ! | GGAGTCTAGCTCCTTGCCCA+TGG | - | chr1_4:70537639-70537658 | Msa0182120:intron | 60.0% |
| ! | GGCGTTGAGTTCCATGGGCA+AGG | + | chr1_4:70537653-70537672 | None:intergenic | 60.0% |
| GATGAGAGGACGGAGGCTGT+TGG | + | chr1_4:70537782-70537801 | None:intergenic | 60.0% | |
| CCTTGGCGTAGACCACGTTG+AGG | + | chr1_4:70538102-70538121 | None:intergenic | 60.0% | |
| CCTCAACGTGGTCTACGCCA+AGG | - | chr1_4:70538099-70538118 | Msa0182120:CDS | 60.0% | |
| ACGGAGAGAGTGGGCATCCT+TGG | + | chr1_4:70538119-70538138 | None:intergenic | 60.0% | |
| GGCGAGGATCAAGTAGTCGG+TGG | - | chr1_4:70538877-70538896 | Msa0182120:intron | 60.0% | |
| CCCTCCTGCTGCAGGCTTTA+TGG | - | chr1_4:70539071-70539090 | Msa0182120:CDS | 60.0% | |
| GGTAGCGACCCCCAGTTGGA+AGG | - | chr1_4:70537155-70537174 | Msa0182120:CDS | 65.0% | |
| CTGCTGCCTCGGCCAGGAAA+AGG | - | chr1_4:70537288-70537307 | Msa0182120:CDS | 65.0% | |
| GAGGACGGAGGCTGTTGGCA+AGG | + | chr1_4:70537777-70537796 | None:intergenic | 65.0% | |
| !! | CAGGAGGGGCACCGACTACT+TGG | + | chr1_4:70539059-70539078 | None:intergenic | 65.0% |
| GGTAGCGACCCCCAGTTGGA+AGG | - | chr1_4:70537155-70537174 | Msa0182120:CDS | 65.0% | |
| CTGCTGCCTCGGCCAGGAAA+AGG | - | chr1_4:70537288-70537307 | Msa0182120:CDS | 65.0% | |
| GAGGACGGAGGCTGTTGGCA+AGG | + | chr1_4:70537777-70537796 | None:intergenic | 65.0% | |
| !! | CAGGAGGGGCACCGACTACT+TGG | + | chr1_4:70539059-70539078 | None:intergenic | 65.0% |
| TCCATGCTGCTGCCTCGGCC+AGG | - | chr1_4:70537282-70537301 | Msa0182120:CDS | 70.0% | |
| TCCTGGCCGAGGCAGCAGCA+TGG | + | chr1_4:70537286-70537305 | None:intergenic | 70.0% | |
| TCCATGCTGCTGCCTCGGCC+AGG | - | chr1_4:70537282-70537301 | Msa0182120:CDS | 70.0% | |
| TCCTGGCCGAGGCAGCAGCA+TGG | + | chr1_4:70537286-70537305 | None:intergenic | 70.0% | |
| ! | GTCGGTGCCCCTCCTGCTGC+AGG | - | chr1_4:70539063-70539082 | Msa0182120:CDS | 75.0% |
| ! | GTCGGTGCCCCTCCTGCTGC+AGG | - | chr1_4:70539063-70539082 | Msa0182120:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 70537146 | 70539365 | 70537146 | ID=Msa0182120;Name=Msa0182120 |
| chr1_4 | mRNA | 70537146 | 70539365 | 70537146 | ID=Msa0182120-mRNA-1;Parent=Msa0182120;Name=Msa0182120-mRNA-1;_AED=0.47;_eAED=0.47;_QI=0|0|0|0.75|1|1|4|0|615 |
| chr1_4 | exon | 70539335 | 70539365 | 70539335 | ID=Msa0182120-mRNA-1:exon:23607;Parent=Msa0182120-mRNA-1 |
| chr1_4 | exon | 70538965 | 70539256 | 70538965 | ID=Msa0182120-mRNA-1:exon:23606;Parent=Msa0182120-mRNA-1 |
| chr1_4 | exon | 70537749 | 70538863 | 70537749 | ID=Msa0182120-mRNA-1:exon:23605;Parent=Msa0182120-mRNA-1 |
| chr1_4 | exon | 70537146 | 70537555 | 70537146 | ID=Msa0182120-mRNA-1:exon:23604;Parent=Msa0182120-mRNA-1 |
| chr1_4 | CDS | 70539335 | 70539365 | 70539335 | ID=Msa0182120-mRNA-1:cds;Parent=Msa0182120-mRNA-1 |
| chr1_4 | CDS | 70538965 | 70539256 | 70538965 | ID=Msa0182120-mRNA-1:cds;Parent=Msa0182120-mRNA-1 |
| chr1_4 | CDS | 70537749 | 70538863 | 70537749 | ID=Msa0182120-mRNA-1:cds;Parent=Msa0182120-mRNA-1 |
| chr1_4 | CDS | 70537146 | 70537555 | 70537146 | ID=Msa0182120-mRNA-1:cds;Parent=Msa0182120-mRNA-1 |
| Gene Sequence |
| Protein sequence |
