AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0186060

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186060 MtrunA17_Chr1g0192761 96.933 978 24 2 1 973 1 977 0.0 1935
Msa0186060 MtrunA17_Chr4g0055151 38.472 746 397 13 227 963 184 876 5.54e-154 477
Msa0186060 MtrunA17_Chr5g0400081 39.200 750 387 17 227 963 179 872 1.51e-147 460
Msa0186060 MtrunA17_Chr1g0192711 93.548 186 10 1 788 973 1 184 1.02e-116 355
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0186060 AT5G26860.1 72.774 977 222 7 1 970 46 985 0.0 1412
Msa0186060 AT3G05790.2 68.545 976 247 14 1 964 1 928 0.0 1276
Msa0186060 AT3G05790.1 67.781 987 247 15 1 964 1 939 0.0 1265
Msa0186060 AT3G05780.1 61.610 969 254 13 19 963 46 920 0.0 1139
Msa0186060 AT5G47040.1 37.685 743 407 10 227 963 183 875 3.90e-145 454
Msa0186060 AT3G05775.1 55.147 136 39 2 356 491 18 131 3.31e-43 154

Find 265 sgRNAs with CRISPR-Local

Find 806 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGATATTTACCTTCTTTA+TGG 0.118362 2_1:-691439 None:intergenic
TATTTATTCAAATTTATATT+TGG 0.174457 2_1:+697064 Msa0186060:three_prime_UTR
TATCCAAGGCTAGCAGATTT+TGG 0.196088 2_1:+690977 Msa0186060:CDS
CAAACTATTGGCAGCTTTAC+AGG 0.199476 2_1:+687495 Msa0186060:CDS
CAGATCTTTGATTTGGCTTT+TGG 0.207377 2_1:+696817 Msa0186060:CDS
GAGTCGGAGTCATCGTTATT+TGG 0.208456 2_1:+685945 Msa0186060:CDS
CAGAGTCTGGCTCATCTTTA+AGG 0.209228 2_1:-687558 None:intergenic
GGTACTACTACCATTCAAAA+AGG 0.243783 2_1:+695312 Msa0186060:CDS
CGCGACAAGAAAGGAAAATT+TGG 0.248028 2_1:+685568 Msa0186060:five_prime_UTR
ATTCATCTTGTCCCGTGTTC+AGG 0.256690 2_1:+696983 Msa0186060:three_prime_UTR
AAGAGTGGCGTGTTCGATTC+TGG 0.263849 2_1:-685670 None:intergenic
AAATCTTCTTCAGCTTTCTT+TGG 0.265036 2_1:-695279 None:intergenic
CTGGTTGACTGCACTGCCTT+GGG 0.267506 2_1:+692504 Msa0186060:CDS
ATGAGCTTCAACATTGGATT+AGG 0.279204 2_1:-685814 None:intergenic
AACACCTATTGGCGTTGTTA+TGG 0.279528 2_1:+695989 Msa0186060:CDS
TTCTTAAAACAAGTTCTCTT+TGG 0.287368 2_1:+688259 Msa0186060:CDS
ACAAGCAAGAAAGGACATTT+TGG 0.292654 2_1:+685599 Msa0186060:five_prime_UTR
ACTGGGGAAGTGACACTTAC+AGG 0.295346 2_1:+696332 Msa0186060:CDS
CTATATGCAGATCTTTGATT+TGG 0.296609 2_1:+696810 Msa0186060:CDS
ATGGAGGTTGTTACTATTGC+TGG 0.307211 2_1:+694681 Msa0186060:CDS
CTGTAAAGCTGCCAATAGTT+TGG 0.307431 2_1:-687494 None:intergenic
AAGAGTGTATATGATTTAAA+AGG 0.309568 2_1:+687613 Msa0186060:CDS
TGTAAAGCTGCCAATAGTTT+GGG 0.309772 2_1:-687493 None:intergenic
CAACATTGGATTAGGGGATT+AGG 0.310764 2_1:-685806 None:intergenic
ATCCTATCCAATAGGGGATT+TGG 0.313473 2_1:-694660 None:intergenic
GCACATTGCAAGAGATTATC+TGG 0.313888 2_1:+694725 Msa0186060:CDS
ATCTTTGATCAAACACCTAT+TGG 0.323599 2_1:+695978 Msa0186060:CDS
ACACCTATTGGCGTTGTTAT+GGG 0.332720 2_1:+695990 Msa0186060:CDS
TCATGTTGCGACTTACTCTA+AGG 0.333632 2_1:+688287 Msa0186060:CDS
GATGGAAATCAGTAAGATTC+AGG 0.339212 2_1:+691257 Msa0186060:CDS
TTCTGTTCGGAGTCGGAATC+CGG 0.342934 2_1:+685982 Msa0186060:CDS
TTGCATATCACCGGTCAATT+AGG 0.347116 2_1:+696092 Msa0186060:CDS
CGGAGAACCGGAACCGCGGC+GGG 0.348037 2_1:-685865 None:intergenic
TGAGCTTCAACATTGGATTA+GGG 0.350002 2_1:-685813 None:intergenic
AGGCATTGTACCATCTTTCC+TGG 0.351046 2_1:-694079 None:intergenic
GGTGAACGTGTGAATTGAAT+TGG 0.351436 2_1:-685785 None:intergenic
GAAAACTATTGCCGAGAATC+AGG 0.352602 2_1:+694960 Msa0186060:CDS
AGTCGGAGTCATCGTTATTT+GGG 0.352726 2_1:+685946 Msa0186060:CDS
GACGACAAGACAGCACTTAC+AGG 0.353278 2_1:+691977 Msa0186060:CDS
AACCTCCATCCTATCCAATA+GGG 0.354645 2_1:-694667 None:intergenic
CCAGCACTTGGTCCATCCTT+TGG 0.358352 2_1:-696242 None:intergenic
CAGTGTTACCCGTAACTACT+TGG 0.360213 2_1:+692480 Msa0186060:CDS
CAACCTCCATCCTATCCAAT+AGG 0.361697 2_1:-694668 None:intergenic
TGATGTGAAGGAAAGAATAT+TGG 0.374667 2_1:+693012 Msa0186060:CDS
ACTGGTTGACTGCACTGCCT+TGG 0.375558 2_1:+692503 Msa0186060:CDS
TAGCATTCTGCTCGGGGTCT+AGG 0.389231 2_1:-694402 None:intergenic
TGGCTGTTCCCACATTCTTA+AGG 0.390705 2_1:-694099 None:intergenic
CACTGCCTTGGGGTGAATAC+AGG 0.393770 2_1:+692515 Msa0186060:CDS
TCAAATAAATAAAACATGTT+TGG 0.394825 2_1:-697087 None:intergenic
AAAATTGGCATGTAAAATCC+TGG 0.395201 2_1:-687186 None:intergenic
GATGATACCAAATCCCCTAT+TGG 0.398960 2_1:+694653 Msa0186060:CDS
GCAGAAGAAGCAGCCTTTGA+CGG 0.404688 2_1:-686057 None:intergenic
TCGTTAATTGTGCAGCATAT+AGG 0.409197 2_1:+690944 Msa0186060:intron
CTTCTTCACAGGCTTCTTCA+AGG 0.409313 2_1:-696297 None:intergenic
AGCTCTAGCAAAGCACTTGC+TGG 0.410126 2_1:-694379 None:intergenic
TTGTTCTATTTGCAGGAATT+GGG 0.411751 2_1:+691944 Msa0186060:intron
AGGAGGAAGGCACCAGCATA+AGG 0.414304 2_1:-687538 None:intergenic
CTAGCTCTTCAAGAACTTGT+TGG 0.416877 2_1:-691033 None:intergenic
TCGGATGCCGGTCGGAGAAC+CGG 0.421239 2_1:-685877 None:intergenic
CATCCAGGACCCCAAACTAT+TGG 0.421388 2_1:+687483 Msa0186060:intron
ATTCTTGATGAAGACCATTA+CGG 0.422676 2_1:+692983 Msa0186060:CDS
TAAGACTATAATATTTCCTT+CGG 0.430379 2_1:+696717 Msa0186060:CDS
AGTGAGGTAATCTTCAGGTC+TGG 0.432451 2_1:-686097 None:intergenic
CGCTTCGCTTCCACCATCAA+TGG 0.432506 2_1:+685703 Msa0186060:five_prime_UTR
AAAAGAAAGAGAGGAAGATA+AGG 0.435059 2_1:+695866 Msa0186060:CDS
CGCGGTTCCGGTTCTCCGAC+CGG 0.435668 2_1:+685870 Msa0186060:CDS
TTCTTCCGATTCTCTGTTGG+AGG 0.437637 2_1:+693912 Msa0186060:CDS
TCCTTTGGTGTAGCCCCTGC+AGG 0.441469 2_1:-696227 None:intergenic
CATTACATCTCCTAATTGAC+CGG 0.444442 2_1:-696102 None:intergenic
GCTGCTCATTTAACAAATAA+CGG 0.445307 2_1:-691410 None:intergenic
ACTACATTGGGATCAGAGTC+TGG 0.445698 2_1:-687571 None:intergenic
GGATCCGCCCATTGCAGTCC+AGG 0.446975 2_1:-696018 None:intergenic
CAAAGATGATGACATCATAA+AGG 0.451957 2_1:+688200 Msa0186060:CDS
TTTGTTAAATGAGCAGCTTA+AGG 0.452656 2_1:+691416 Msa0186060:CDS
TTTAACCGTCTTCATGAAGT+TGG 0.454685 2_1:+687646 Msa0186060:CDS
GGAAGATTCTTCCCATTGGC+GGG 0.455433 2_1:+696354 Msa0186060:CDS
GGGCATCGTCGAACATATAT+AGG 0.456607 2_1:+694049 Msa0186060:CDS
TTTCTCCCGTAGTATATCTC+TGG 0.456893 2_1:-696156 None:intergenic
GGACTTGCCTGGACTGCAAT+GGG 0.458484 2_1:+696011 Msa0186060:CDS
ATGCGCTCTGCATGGAAGAC+AGG 0.461919 2_1:-695957 None:intergenic
TCGGAAGAACTTACGGTTCA+AGG 0.462402 2_1:-693898 None:intergenic
CCAACAGTGAGGTAATCTTC+AGG 0.462835 2_1:-686102 None:intergenic
GGTTTCTGACTCCTGATTCT+CGG 0.463551 2_1:-694971 None:intergenic
AGTCCCATAACAACGCCAAT+AGG 0.466901 2_1:-695993 None:intergenic
TCAACCAGTCCAAGTAGTTA+CGG 0.467423 2_1:-692489 None:intergenic
ATCAATCAATACAAGAGGAT+TGG 0.467735 2_1:-694119 None:intergenic
CACATGATCGGGTCCGTCGC+CGG 0.469622 2_1:-686001 None:intergenic
ATTCAGTTCCGCGACAAGAA+AGG 0.470383 2_1:+685559 Msa0186060:five_prime_UTR
GTGAGGTAATCTTCAGGTCT+GGG 0.470829 2_1:-686096 None:intergenic
AGAAAATTAGCATTCTGCTC+GGG 0.472974 2_1:-694409 None:intergenic
TTTCACCTCCATGTTCCTGC+AGG 0.474314 2_1:+696212 Msa0186060:CDS
ACGTCTGCGCATAACAGATA+TGG 0.474819 2_1:+687838 Msa0186060:CDS
AAGATATTTAGAGAATTGAA+TGG 0.477254 2_1:-685748 None:intergenic
AGCTGATGTGGCTGAAATCA+AGG 0.477589 2_1:+693938 Msa0186060:CDS
ATCTTCAGGTCTGGGATAAG+TGG 0.477893 2_1:-686088 None:intergenic
ATGGAGGTGAAACTTTGTAT+TGG 0.479069 2_1:-696201 None:intergenic
CAGAGAATCGGAAGAACTTA+CGG 0.479231 2_1:-693905 None:intergenic
GGAGGAAGGCACCAGCATAA+GGG 0.480370 2_1:-687537 None:intergenic
CGCAAAGCTACAGCTGTTGG+AGG 0.483633 2_1:+692441 Msa0186060:CDS
TTAACCGTCTTCATGAAGTT+GGG 0.483727 2_1:+687647 Msa0186060:CDS
TTCATCTTGTCCCGTGTTCA+GGG 0.483981 2_1:+696984 Msa0186060:three_prime_UTR
TTCACCTCCATGTTCCTGCA+GGG 0.487052 2_1:+696213 Msa0186060:CDS
CAACCAGTCCAAGTAGTTAC+GGG 0.489175 2_1:-692488 None:intergenic
GATGAAATGAGCTTCAACAT+TGG 0.489422 2_1:-685820 None:intergenic
CTATTTGCAGGAATTGGGAC+TGG 0.490136 2_1:+691949 Msa0186060:intron
GTGAACGTGTGAATTGAATT+GGG 0.490666 2_1:-685784 None:intergenic
TATTGGAATTCATAGCTGTT+GGG 0.491082 2_1:+693029 Msa0186060:CDS
CTTGAAGAAGCCTGTGAAGA+AGG 0.492602 2_1:+696298 Msa0186060:CDS
TCTTTCTGGTCCACCAGGCG+TGG 0.492953 2_1:+693842 Msa0186060:CDS
ATCTGTCTTTCTGGTCCACC+AGG 0.496614 2_1:+693837 Msa0186060:CDS
GGAGATGCGGAGTCGGATGC+CGG 0.497275 2_1:-685889 None:intergenic
TACCAGATTTCAAGTATCCA+TGG 0.498537 2_1:+687788 Msa0186060:intron
AAGAAGGATCTAGCAATGAC+TGG 0.500187 2_1:+696314 Msa0186060:CDS
AAGTTCTTCCGATTCTCTGT+TGG 0.500807 2_1:+693909 Msa0186060:CDS
GCAGACGTCGATGACCAATC+AGG 0.501261 2_1:-687823 None:intergenic
TTCAGCATCAACCACATGAT+CGG 0.501309 2_1:-686013 None:intergenic
GCTCCAAAATCTGCTAGCCT+TGG 0.502465 2_1:-690980 None:intergenic
TTTCAGGTAAATTCAGGGAA+AGG 0.503118 2_1:+692359 Msa0186060:intron
GATCGACAAGCCCCTTATGC+TGG 0.504477 2_1:+687526 Msa0186060:CDS
GAGAACCGGAACCGCGGCGG+GGG 0.505635 2_1:-685863 None:intergenic
GGGACTTGCCTGGACTGCAA+TGG 0.506970 2_1:+696010 Msa0186060:CDS
ATTGCTAGATCCTTCTTCAC+AGG 0.508073 2_1:-696308 None:intergenic
ACTCGCAAAGCTACAGCTGT+TGG 0.510817 2_1:+692438 Msa0186060:CDS
GCGTTGTTATGGGACTTGCC+TGG 0.510909 2_1:+696000 Msa0186060:CDS
CTAATCCTCCAACAGAGAAT+CGG 0.510914 2_1:-693917 None:intergenic
GTGGCGATAACCACCATTGA+TGG 0.511996 2_1:-685716 None:intergenic
GTTGAACAAGGGGACGGAAA+AGG 0.512423 2_1:+696065 Msa0186060:CDS
TTCAATTGATAGTTGGGCAA+AGG 0.515247 2_1:+694343 Msa0186060:intron
GGGGATCAAGTGATCCTGAT+TGG 0.515553 2_1:+687809 Msa0186060:CDS
AGATATTTAGAGAATTGAAT+GGG 0.516776 2_1:-685747 None:intergenic
GTAGGTTACAAAAGAAAGAG+AGG 0.517536 2_1:+695857 Msa0186060:intron
AGGTGCTATGCCAGGAAAGA+TGG 0.518171 2_1:+694069 Msa0186060:CDS
CGATGGGAACATCAAGATAG+TGG 0.518244 2_1:-694435 None:intergenic
ATGTAAAATCCTGGGAAAAG+AGG 0.521237 2_1:-687177 None:intergenic
TCAGCATCAACCACATGATC+GGG 0.521329 2_1:-686012 None:intergenic
TCAGAGCTAGATACTACATT+GGG 0.523442 2_1:-687583 None:intergenic
AAATCCCCTATTGGATAGGA+TGG 0.523871 2_1:+694662 Msa0186060:CDS
ATATTGGAATTCATAGCTGT+TGG 0.524360 2_1:+693028 Msa0186060:CDS
CGATAAATCTACAGATATTG+AGG 0.524661 2_1:+695440 Msa0186060:CDS
TCGGAGAACCGGAACCGCGG+CGG 0.525377 2_1:-685866 None:intergenic
TCGAGGTCATATCAACACTA+AGG 0.526191 2_1:+688232 Msa0186060:CDS
TCACAGGCTTCTTCAAGGCA+AGG 0.527647 2_1:-696292 None:intergenic
TTTCAACATACCCCGCCAAT+GGG 0.528178 2_1:-696365 None:intergenic
GCAATTGAAGAAAAGATAAG+TGG 0.530216 2_1:+691378 Msa0186060:CDS
ATTGAAACTTACACTCGAGT+TGG 0.530852 2_1:+691224 Msa0186060:CDS
CTAGCACCTAATGTAAAAGA+AGG 0.533550 2_1:+696763 Msa0186060:CDS
AGCTGAGGAAACTCCGTCAA+AGG 0.534058 2_1:+686044 Msa0186060:CDS
GTGTAGCCCCTGCAGGAACA+TGG 0.534094 2_1:-696220 None:intergenic
TCACATCAGTTAATCCGTAA+TGG 0.534207 2_1:-692997 None:intergenic
GGAGAACCGGAACCGCGGCG+GGG 0.537227 2_1:-685864 None:intergenic
TGGAGGTTGTTACTATTGCT+GGG 0.538931 2_1:+694682 Msa0186060:CDS
CATAAAGGCCACATCTTTCG+AGG 0.539389 2_1:+688215 Msa0186060:CDS
GGGAAGATTCTTCCCATTGG+CGG 0.539390 2_1:+696353 Msa0186060:CDS
TCCTTATTTGCAGGTTAGCG+AGG 0.540613 2_1:+688014 Msa0186060:intron
ACACAGAGAGATTGATCTGC+CGG 0.541557 2_1:-695414 None:intergenic
CAGAAAATTAGCATTCTGCT+CGG 0.543929 2_1:-694410 None:intergenic
CCAAAGGATGGACCAAGTGC+TGG 0.544861 2_1:+696242 Msa0186060:CDS
ACCAACCTTCGATAGATCGA+TGG 0.546134 2_1:-694452 None:intergenic
GGATAGACGAGGGTTTATGA+AGG 0.547445 2_1:+685628 Msa0186060:five_prime_UTR
GAGAAGTAAATCACTAATGC+CGG 0.548477 2_1:+696862 Msa0186060:exon
AAGAAGCGGAGATGCGGAGT+CGG 0.548637 2_1:-685896 None:intergenic
TATTGGCCGTTCAATTGCAC+GGG 0.548721 2_1:+693875 Msa0186060:CDS
GGTACAATGCCTTAAGAATG+TGG 0.549700 2_1:+694090 Msa0186060:CDS
AAATCTCTCTTATTTGCCGA+AGG 0.551137 2_1:-696733 None:intergenic
CACAGGCTTCTTCAAGGCAA+GGG 0.551692 2_1:-696291 None:intergenic
ATGAGAACTTTCATGTCACT+CGG 0.551746 2_1:+692951 Msa0186060:CDS
ACAGGGAAGATTCTTCCCAT+TGG 0.553268 2_1:+696350 Msa0186060:CDS
CTTTCTGGTCCACCAGGCGT+GGG 0.553340 2_1:+693843 Msa0186060:CDS
ACCAGATTTCAAGTATCCAT+GGG 0.554863 2_1:+687789 Msa0186060:intron
CAAAGCACTTGCTGGATCAC+CGG 0.556600 2_1:-694371 None:intergenic
CTGGGGAAGTGACACTTACA+GGG 0.558048 2_1:+696333 Msa0186060:CDS
AACTCTAAGAAGCGGAGATG+CGG 0.558089 2_1:-685902 None:intergenic
GAGGAAGGCACCAGCATAAG+GGG 0.562567 2_1:-687536 None:intergenic
CAATTGCCAGAGATATACTA+CGG 0.563266 2_1:+696150 Msa0186060:CDS
GTCATCGTGCAACCAGCACT+TGG 0.567012 2_1:-696254 None:intergenic
TCACCTCCATGTTCCTGCAG+GGG 0.567880 2_1:+696214 Msa0186060:CDS
TGAAGCATGTGGAATAAAGC+CGG 0.570845 2_1:+694761 Msa0186060:CDS
GAAAATTAGCATTCTGCTCG+GGG 0.572122 2_1:-694408 None:intergenic
GCAGCTTAAGGCCATAAAGA+AGG 0.572516 2_1:+691428 Msa0186060:CDS
TCCTGCAGGGGCTACACCAA+AGG 0.573234 2_1:+696226 Msa0186060:CDS
GACTAAATCTGTTGAACAAG+GGG 0.573898 2_1:+696055 Msa0186060:CDS
CGAGTTGGTAAAGAAAGAGA+TGG 0.574235 2_1:+691239 Msa0186060:CDS
TGGTTGACTGCACTGCCTTG+GGG 0.574302 2_1:+692505 Msa0186060:CDS
GATAGACGAGGGTTTATGAA+GGG 0.574654 2_1:+685629 Msa0186060:five_prime_UTR
ATTTCATCAATCAATACAAG+AGG 0.574893 2_1:-694124 None:intergenic
CGGAGTCATCGTTATTTGGG+AGG 0.577310 2_1:+685949 Msa0186060:CDS
GAGCTTCAACATTGGATTAG+GGG 0.578639 2_1:-685812 None:intergenic
CTTGCCTGGACTGCAATGGG+CGG 0.579469 2_1:+696014 Msa0186060:CDS
GTATTGGCCGTTCAATTGCA+CGG 0.579673 2_1:+693874 Msa0186060:CDS
TGGCTCATCTTTAAGGAGGA+AGG 0.579983 2_1:-687551 None:intergenic
ACATATATAGGTGCTATGCC+AGG 0.581505 2_1:+694061 Msa0186060:CDS
GTTTCATCTCAAGATCCTAC+CGG 0.581968 2_1:-696881 None:intergenic
AGAAAACTATTGCTGCAAGA+AGG 0.583435 2_1:+696686 Msa0186060:CDS
TTCGCTTCCACCATCAATGG+TGG 0.583472 2_1:+685706 Msa0186060:five_prime_UTR
TCAAGGCCCGTGCAATTGAA+CGG 0.585038 2_1:-693881 None:intergenic
AAATTGGCATGTAAAATCCT+GGG 0.585606 2_1:-687185 None:intergenic
AGAAGGATCTAGCAATGACT+GGG 0.587164 2_1:+696315 Msa0186060:CDS
TTACCCGTAACTACTTGGAC+TGG 0.587817 2_1:+692485 Msa0186060:CDS
ATAGCTGTTGGGAAATTGAG+AGG 0.587899 2_1:+693040 Msa0186060:CDS
TGTTGGAGGATTAGCTGATG+TGG 0.590169 2_1:+693926 Msa0186060:CDS
TGCTGAAGCTAAAGCAGCTG+AGG 0.591116 2_1:+686029 Msa0186060:CDS
GGAGTCATCGTTATTTGGGA+GGG 0.592287 2_1:+685950 Msa0186060:CDS
ATAACTTGTAACACATGAGG+TGG 0.593186 2_1:-692406 None:intergenic
CGAGGTCATATCAACACTAA+GGG 0.595033 2_1:+688233 Msa0186060:CDS
AAAGGAGCATTGCATATCAC+CGG 0.595784 2_1:+696083 Msa0186060:CDS
GATCAAAGATGCGCTCTGCA+TGG 0.595860 2_1:-695965 None:intergenic
GAATTCAAAACTCTAAGAAG+CGG 0.598158 2_1:-685910 None:intergenic
TAGCTGTTGGGAAATTGAGA+GGG 0.598517 2_1:+693041 Msa0186060:CDS
TCAGGATCACTTGATCCCCA+TGG 0.598561 2_1:-687805 None:intergenic
TTACGGATTAACTGATGTGA+AGG 0.600376 2_1:+693000 Msa0186060:CDS
TCGGAGTCGGAATCCGGCGA+CGG 0.603037 2_1:+685988 Msa0186060:CDS
CCAACCTTCGATAGATCGAT+GGG 0.604425 2_1:-694451 None:intergenic
GAAGATTCTTCCCATTGGCG+GGG 0.605198 2_1:+696355 Msa0186060:CDS
ATATAATACAAAACTCAGAC+CGG 0.605595 2_1:-696927 None:intergenic
TGAATCGAAGACTGTTGAGA+AGG 0.606498 2_1:+695893 Msa0186060:CDS
GGTTAAGCGGTGGATGCAAG+AGG 0.609761 2_1:-685842 None:intergenic
GCGATAACCACCATTGATGG+TGG 0.609948 2_1:-685713 None:intergenic
ATTCTCTCAGCGGATTGAGT+CGG 0.610901 2_1:+685929 Msa0186060:CDS
GTCAGAGCTAGATACTACAT+TGG 0.612372 2_1:-687584 None:intergenic
TACCAAATCCCCTATTGGAT+AGG 0.612747 2_1:+694658 Msa0186060:CDS
GAGACTAAATCTGTTGAACA+AGG 0.612839 2_1:+696053 Msa0186060:CDS
CGGCGACGGACCCGATCATG+TGG 0.613445 2_1:+686002 Msa0186060:CDS
GCAGGGGCTACACCAAAGGA+TGG 0.614871 2_1:+696230 Msa0186060:CDS
TGATGGTGGAAGCGAAGCGG+AGG 0.615181 2_1:-685699 None:intergenic
AAAAGAGGTCTATGTTGCAA+CGG 0.615327 2_1:-687162 None:intergenic
TTGCTACTCTCTATCAACAC+GGG 0.615994 2_1:-695339 None:intergenic
TGTTTGCACTGCAAATGTAG+TGG 0.616187 2_1:+694629 Msa0186060:CDS
GAGTCCCAACTTCATGAAGA+CGG 0.618939 2_1:-687651 None:intergenic
ACCTCCATCCTATCCAATAG+GGG 0.626225 2_1:-694666 None:intergenic
GTACAATGCCTTAAGAATGT+GGG 0.627193 2_1:+694091 Msa0186060:CDS
TTGGTCATTTGGATAGACGA+GGG 0.627325 2_1:+685618 Msa0186060:five_prime_UTR
GGCAAGGGACAACATAGAAG+TGG 0.633373 2_1:-696276 None:intergenic
ATGCGGAGTCGGATGCCGGT+CGG 0.634475 2_1:-685885 None:intergenic
TAGTTGGGCAAAGGACATGC+CGG 0.635078 2_1:+694352 Msa0186060:intron
AAGCGGAGGAAGAAGAAGAG+TGG 0.636088 2_1:-685685 None:intergenic
TCCCCTATTGGATAGGATGG+AGG 0.636687 2_1:+694665 Msa0186060:CDS
TGTTCCCATCGATCTATCGA+AGG 0.639058 2_1:+694447 Msa0186060:CDS
AAAACTACACGTGAAGCATG+TGG 0.641017 2_1:+694750 Msa0186060:CDS
TGAGATGAACACAAATCCAC+CGG 0.643292 2_1:+695395 Msa0186060:CDS
AAATTGAGAGGGACTTCACA+AGG 0.643864 2_1:+693052 Msa0186060:CDS
AAATCTGTTGAACAAGGGGA+CGG 0.651170 2_1:+696059 Msa0186060:CDS
AGTAAATCACTAATGCCGGT+AGG 0.651252 2_1:+696866 Msa0186060:exon
AGACTAAATCTGTTGAACAA+GGG 0.652455 2_1:+696054 Msa0186060:CDS
TATTGCTGCAAGAAGGAGTG+AGG 0.652496 2_1:+696693 Msa0186060:CDS
TTTGGTCATTTGGATAGACG+AGG 0.653553 2_1:+685617 Msa0186060:five_prime_UTR
GTAAAGCTGCCAATAGTTTG+GGG 0.653963 2_1:-687492 None:intergenic
TCTATAACTTGTAACACATG+AGG 0.655916 2_1:-692409 None:intergenic
TTTAGTCTCTATATACAGTG+TGG 0.656615 2_1:-696039 None:intergenic
CGGTCGGAGAACCGGAACCG+CGG 0.661798 2_1:-685869 None:intergenic
TAACTTGTAACACATGAGGT+GGG 0.663798 2_1:-692405 None:intergenic
ATTGCTACTCTCTATCAACA+CGG 0.665388 2_1:-695340 None:intergenic
AATTGCCAGAGATATACTAC+GGG 0.666821 2_1:+696151 Msa0186060:CDS
AGATAGCGCTACGACTTGTG+AGG 0.667785 2_1:+695226 Msa0186060:intron
TGAGAACTTTCATGTCACTC+GGG 0.669113 2_1:+692952 Msa0186060:CDS
CATTGATGGTGGAAGCGAAG+CGG 0.670697 2_1:-685702 None:intergenic
CAGAGAGATTGATCTGCCGG+TGG 0.680139 2_1:-695411 None:intergenic
AGTCTGGCTCATCTTTAAGG+AGG 0.681007 2_1:-687555 None:intergenic
ACAAACCTGTATTCACCCCA+AGG 0.685382 2_1:-692520 None:intergenic
TGATATGACCTCGAAAGATG+TGG 0.692394 2_1:-688223 None:intergenic
TGCTACTCTCTATCAACACG+GGG 0.697572 2_1:-695338 None:intergenic
GCTACGACTTGTGAGGCACG+TGG 0.709175 2_1:+695233 Msa0186060:CDS
CCAGATTTCAAGTATCCATG+GGG 0.727231 2_1:+687790 Msa0186060:intron
GAAGGATCTAGCAATGACTG+GGG 0.732838 2_1:+696316 Msa0186060:CDS
TAGCCCCTGCAGGAACATGG+AGG 0.733655 2_1:-696217 None:intergenic
TGTGTTACAAGTTATAGACG+AGG 0.751251 2_1:+692414 Msa0186060:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTTTTTAATTTA+TGG + chr2_1:696396-696415 Msa0186060:intron 0.0%
!!! TTTTTTTTTTATTATTCTTG+TGG + chr2_1:686604-686623 Msa0186060:intron 10.0%
!! TGCTAAAATTAATTAAAAAA+TGG + chr2_1:687874-687893 Msa0186060:intron 10.0%
!! TAAGCAATAATAAATAATAA+GGG - chr2_1:688468-688487 None:intergenic 10.0%
!! ATAAGCAATAATAAATAATA+AGG - chr2_1:688469-688488 None:intergenic 10.0%
!! TTTATTTATTCTTAAACAAA+CGG + chr2_1:689897-689916 Msa0186060:intron 10.0%
!!! TTTAATAAGAGTATTTTATA+TGG + chr2_1:690641-690660 Msa0186060:intron 10.0%
!!! TTAATAAGAGTATTTTATAT+GGG + chr2_1:690642-690661 Msa0186060:intron 10.0%
!! ATATATAGAGAAAAAAAATT+GGG - chr2_1:693285-693304 None:intergenic 10.0%
!! TATATATAGAGAAAAAAAAT+TGG - chr2_1:693286-693305 None:intergenic 10.0%
!! ATAAAATTATAAATGTTCAA+TGG + chr2_1:693303-693322 Msa0186060:intron 10.0%
!!! TGAATTTTAAATAAATGAAT+TGG - chr2_1:693741-693760 None:intergenic 10.0%
!! TAAAATTTCTAATAAACAAA+TGG - chr2_1:696541-696560 None:intergenic 10.0%
!!! TTTTAATTTGATTGGAAAAT+GGG + chr2_1:686212-686231 Msa0186060:intron 15.0%
!!! GTGTTTTTTATTATAGATAT+AGG + chr2_1:686291-686310 Msa0186060:intron 15.0%
!!! TTTTCGATAAAATTATAATC+AGG - chr2_1:687035-687054 None:intergenic 15.0%
!! AAAAGTCAATAAAAGATAAA+AGG - chr2_1:688152-688171 None:intergenic 15.0%
!! AAGCAATAATAAATAATAAG+GGG - chr2_1:688467-688486 None:intergenic 15.0%
!!! GAACCTTTTTTTTTTTTAAA+CGG + chr2_1:688740-688759 Msa0186060:intron 15.0%
!!! TCAAGATATCTTAATTTTTA+AGG - chr2_1:688784-688803 None:intergenic 15.0%
!! TTATTTATTCTTAAACAAAC+GGG + chr2_1:689898-689917 Msa0186060:intron 15.0%
!! CTTGTATTAACATATATAAT+AGG - chr2_1:690228-690247 None:intergenic 15.0%
!! ATTATATATGTTAATACAAG+AGG + chr2_1:690228-690247 Msa0186060:intron 15.0%
!! TTATATATGTTAATACAAGA+GGG + chr2_1:690229-690248 Msa0186060:intron 15.0%
!!! TTAATTTTCTCAGAAATTAA+TGG + chr2_1:690744-690763 Msa0186060:intron 15.0%
!!! TTTGAATTTTTTCTATATGT+GGG + chr2_1:691606-691625 Msa0186060:intron 15.0%
!!! GTTATAATCTTTTTTTAAGA+TGG + chr2_1:692003-692022 Msa0186060:intron 15.0%
!! AAAAAAAATAAAAACCAGTT+AGG - chr2_1:692159-692178 None:intergenic 15.0%
!!! TAACTGGTTTTTATTTTTTT+TGG + chr2_1:692158-692177 Msa0186060:intron 15.0%
!!! TTAACTATACTTTTTATTTC+AGG + chr2_1:692343-692362 Msa0186060:intron 15.0%
!! ATAGCAATTTAATATATTAC+AGG + chr2_1:693396-693415 Msa0186060:intron 15.0%
!!! TTATAATGACTGAATTTTAA+AGG - chr2_1:693651-693670 None:intergenic 15.0%
!!! TCATTAATATTGAATTTTAC+AGG + chr2_1:694027-694046 Msa0186060:intron 15.0%
!!! CATTAATATTGAATTTTACA+GGG + chr2_1:694028-694047 Msa0186060:intron 15.0%
!!! ATTAATATTGAATTTTACAG+GGG + chr2_1:694029-694048 Msa0186060:intron 15.0%
!! ATTCATGCATTATATTTATT+AGG - chr2_1:694240-694259 None:intergenic 15.0%
!! CGTAAAAAATTTAACAAAAT+TGG - chr2_1:694264-694283 None:intergenic 15.0%
!! ATATTTATGTATGTTAATGT+TGG + chr2_1:695835-695854 Msa0186060:intron 15.0%
!! AATAAACAAATGGTATTTAT+TGG - chr2_1:696531-696550 None:intergenic 15.0%
!!! TTAAGATAAATTTTACAACT+GGG - chr2_1:697044-697063 None:intergenic 15.0%
!!! ATTAAGATAAATTTTACAAC+TGG - chr2_1:697045-697064 None:intergenic 15.0%
!! TCAAATAAATAAAACATGTT+TGG - chr2_1:697090-697109 None:intergenic 15.0%
!! AGATATTTAGAGAATTGAAT+GGG - chr2_1:685750-685769 None:intergenic 20.0%
!! AAGATATTTAGAGAATTGAA+TGG - chr2_1:685751-685770 None:intergenic 20.0%
!!! ATGTTACGTTTTAATTTGAT+TGG + chr2_1:686204-686223 Msa0186060:intron 20.0%
!!! GTTTTAATTTGATTGGAAAA+TGG + chr2_1:686211-686230 Msa0186060:intron 20.0%
!!! TTTAATTTGATTGGAAAATG+GGG + chr2_1:686213-686232 Msa0186060:intron 20.0%
!! TTGTTAAATAGTAGTTATAG+TGG + chr2_1:686418-686437 Msa0186060:intron 20.0%
!! AATAATAAATACTTGGTTGT+AGG - chr2_1:686569-686588 None:intergenic 20.0%
!! AGGAAAGAATAATAAATACT+TGG - chr2_1:686576-686595 None:intergenic 20.0%
!!! TCTATTGATAATATAATCAG+AGG - chr2_1:686952-686971 None:intergenic 20.0%
!!! AAGAGTGTATATGATTTAAA+AGG + chr2_1:687613-687632 Msa0186060:CDS 20.0%
!!! AATGGTGTTTGATAATATTT+TGG + chr2_1:687892-687911 Msa0186060:intron 20.0%
!!! ATCTTTTATTGACTTTTACT+TGG + chr2_1:688155-688174 Msa0186060:intron 20.0%
!! GATCCGTTTAAAAAAAAAAA+AGG - chr2_1:688746-688765 None:intergenic 20.0%
!! TATTGTTATGGGAAAATTAA+CGG - chr2_1:688927-688946 None:intergenic 20.0%
!! AAACTAAAGTAAAAAGGTAA+GGG - chr2_1:688976-688995 None:intergenic 20.0%
!! AAAACTAAAGTAAAAAGGTA+AGG - chr2_1:688977-688996 None:intergenic 20.0%
!!! TTACCTTTTTACTTTAGTTT+TGG + chr2_1:688976-688995 Msa0186060:intron 20.0%
!! ATATTTAAACTGTGTAACTT+GGG - chr2_1:689229-689248 None:intergenic 20.0%
!! TTACACAGTTTAAATATCTT+GGG + chr2_1:689232-689251 Msa0186060:intron 20.0%
!! GCCCAAAAAAAATAAAAAAT+GGG + chr2_1:690031-690050 Msa0186060:intron 20.0%
!!! GCCCATTTTTTATTTTTTTT+GGG - chr2_1:690035-690054 None:intergenic 20.0%
!! ACATCAATGAATTTATTTGT+AGG + chr2_1:690611-690630 Msa0186060:intron 20.0%
!!! ACTTCTAAAATTCAAAAAGT+TGG + chr2_1:691528-691547 Msa0186060:intron 20.0%
!!! GTTTGAATTTTTTCTATATG+TGG + chr2_1:691605-691624 Msa0186060:intron 20.0%
!!! ATAATCTTTTTTTAAGATGG+TGG + chr2_1:692006-692025 Msa0186060:intron 20.0%
!!! TTTTTATTTCAGGTAAATTC+AGG + chr2_1:692353-692372 Msa0186060:intron 20.0%
!!! TTTTATTTCAGGTAAATTCA+GGG + chr2_1:692354-692373 Msa0186060:intron 20.0%
!!! TGAATTTTGGACAAAATAAT+AGG - chr2_1:693456-693475 None:intergenic 20.0%
!!! TTATTTAAAATTCAAGCCTT+TGG + chr2_1:693747-693766 Msa0186060:intron 20.0%
!! TGTAGAATATTTATGAGATT+AGG - chr2_1:694290-694309 None:intergenic 20.0%
!! CTCATAAATATTCTACATAA+AGG + chr2_1:694293-694312 Msa0186060:intron 20.0%
!!! TGTTTTATTCAATTGATAGT+TGG + chr2_1:694336-694355 Msa0186060:intron 20.0%
!!! GTTTTATTCAATTGATAGTT+GGG + chr2_1:694337-694356 Msa0186060:intron 20.0%
!! TACTAATTTCAAGCATTAAT+GGG + chr2_1:695553-695572 Msa0186060:intron 20.0%
!!! TCAAATTTGTTAATCATTAG+CGG - chr2_1:695816-695835 None:intergenic 20.0%
!!! TTTTAAAGTTATTTCTGAGT+TGG + chr2_1:696479-696498 Msa0186060:intron 20.0%
!!! ATTAGAAATTTTAGTCATGT+AGG + chr2_1:696548-696567 Msa0186060:intron 20.0%
!!! TGAATAATAATCAGTTTGTT+GGG - chr2_1:696582-696601 None:intergenic 20.0%
!! ATGAATAATAATCAGTTTGT+TGG - chr2_1:696583-696602 None:intergenic 20.0%
!! AAAAGAAATCATGACAATAT+GGG - chr2_1:696611-696630 None:intergenic 20.0%
!! AAAAAGAAATCATGACAATA+TGG - chr2_1:696612-696631 None:intergenic 20.0%
!! TAAGACTATAATATTTCCTT+CGG + chr2_1:696717-696736 Msa0186060:CDS 20.0%
!!! TTGATGTTATATTTTTGCTA+AGG + chr2_1:697106-697125 Msa0186060:three_prime_UTR 20.0%
! TGGATAAGCAACAAATTTAA+AGG - chr2_1:686678-686697 None:intergenic 25.0%
! AACAAAACTAACTAACTATC+CGG - chr2_1:686727-686746 None:intergenic 25.0%
! TCGATAAAATTATAATCAGG+AGG - chr2_1:687032-687051 None:intergenic 25.0%
!!! TTATTTTTTCTCCTTTCTGT+TGG + chr2_1:687122-687141 Msa0186060:intron 25.0%
!! TTACATGCCAATTTTTGTTA+AGG + chr2_1:687194-687213 Msa0186060:CDS 25.0%
!! CTAAACAAGTAATTTGTAGA+AGG - chr2_1:687724-687743 None:intergenic 25.0%
! AGGATTATTGACAAAAAGTT+AGG - chr2_1:687760-687779 None:intergenic 25.0%
! ACAAAACTCAAACACAAATA+TGG - chr2_1:687926-687945 None:intergenic 25.0%
!!! TGTGTTTGAGTTTTGTTTAT+AGG + chr2_1:687930-687949 Msa0186060:intron 25.0%
!!! GTGTTTGAGTTTTGTTTATA+GGG + chr2_1:687931-687950 Msa0186060:intron 25.0%
! TTCAATGAGAATACAAAATG+AGG - chr2_1:688093-688112 None:intergenic 25.0%
!! ATTTTGTATTCTCATTGAAG+TGG + chr2_1:688094-688113 Msa0186060:intron 25.0%
! TTCTTAAAACAAGTTCTCTT+TGG + chr2_1:688259-688278 Msa0186060:CDS 25.0%
! AAAAAAGGTTCATTATCTCA+AGG - chr2_1:688731-688750 None:intergenic 25.0%
! TTCTTATATTAGAGCTATCA+AGG + chr2_1:688853-688872 Msa0186060:intron 25.0%
!! GTTAATTTTCCCATAACAAT+AGG + chr2_1:688926-688945 Msa0186060:intron 25.0%
! CATCCAAAACTAAAGTAAAA+AGG - chr2_1:688982-689001 None:intergenic 25.0%
! TATTTAAACTGTGTAACTTG+GGG - chr2_1:689228-689247 None:intergenic 25.0%
! GATATTTAAACTGTGTAACT+TGG - chr2_1:689230-689249 None:intergenic 25.0%
! GTTACACAGTTTAAATATCT+TGG + chr2_1:689231-689250 Msa0186060:intron 25.0%
! CTTATCACATAAAACATATG+AGG - chr2_1:689335-689354 None:intergenic 25.0%
! TAGAAAAGATGGTAGAAAAT+AGG + chr2_1:689568-689587 Msa0186060:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr2_1:689699-689718 None:intergenic 25.0%
! AACTATCAAGAATGATTTAG+AGG + chr2_1:689716-689735 Msa0186060:intron 25.0%
! GGCCCAAAAAAAATAAAAAA+TGG + chr2_1:690030-690049 Msa0186060:intron 25.0%
!!! GGCCCATTTTTTATTTTTTT+TGG - chr2_1:690036-690055 None:intergenic 25.0%
!!! AGTGTTGTTTTATGAAGTAA+AGG + chr2_1:690299-690318 Msa0186060:intron 25.0%
! CTTTAAATATGAAAGTCTTG+TGG - chr2_1:690389-690408 None:intergenic 25.0%
!! TCTCAGAAATTAATGGATAA+TGG + chr2_1:690751-690770 Msa0186060:intron 25.0%
!! CAATTAAAGAGTACAAGAAA+AGG - chr2_1:690823-690842 None:intergenic 25.0%
!!! GCACTGAATTTTTTAACATT+TGG + chr2_1:691163-691182 Msa0186060:intron 25.0%
!!! CTGAATTTTTTAACATTTGG+AGG + chr2_1:691166-691185 Msa0186060:intron 25.0%
! AAGGATATTTACCTTCTTTA+TGG - chr2_1:691442-691461 None:intergenic 25.0%
! TTTATCAAACCAAATCATGA+AGG - chr2_1:691461-691480 None:intergenic 25.0%
! TAACATAAAGGATTCTACAA+TGG - chr2_1:691575-691594 None:intergenic 25.0%
! GCTATACTTACTATATAAGT+TGG + chr2_1:691891-691910 Msa0186060:intron 25.0%
!! TTGAATTTTGTTCTATTTGC+AGG + chr2_1:691937-691956 Msa0186060:intron 25.0%
! GGTGAACATATTTAGTAATT+TGG - chr2_1:692138-692157 None:intergenic 25.0%
! TATTCATAGCAAACAAAAAG+AGG - chr2_1:692206-692225 None:intergenic 25.0%
! TATCTTTCAAAACTGTTGTA+TGG + chr2_1:692224-692243 Msa0186060:intron 25.0%
!!! ATTTTAGTTGTCAACTTCTA+AGG - chr2_1:692642-692661 None:intergenic 25.0%
!! TGCATAAGCATAATTTTCAT+AGG + chr2_1:692661-692680 Msa0186060:intron 25.0%
!!! ATTTTAGTTGTCAACTTCTA+AGG - chr2_1:692642-692661 None:intergenic 25.0%
!! TGCATAAGCATAATTTTCAT+AGG + chr2_1:692661-692680 Msa0186060:intron 25.0%
!!! TAATGACTGAATTTTAAAGG+CGG - chr2_1:693648-693667 None:intergenic 25.0%
!! AATAAATGAATTGGCTTATG+AGG - chr2_1:693732-693751 None:intergenic 25.0%
! ATTTCATCAATCAATACAAG+AGG - chr2_1:694127-694146 None:intergenic 25.0%
! TAGACAGTTCAATTTATTTG+TGG + chr2_1:694166-694185 Msa0186060:intron 25.0%
!!! TTTGTTTTCTAATTTCCCTT+TGG + chr2_1:694198-694217 Msa0186060:intron 25.0%
! TGCACTGTTTATTTATTACA+TGG + chr2_1:694514-694533 Msa0186060:intron 25.0%
! GAAAAGAAAAATACTTGTTC+CGG - chr2_1:694783-694802 None:intergenic 25.0%
!!! ATTGCCTTATTGGTTTTAAT+TGG + chr2_1:694862-694881 Msa0186060:intron 25.0%
! TCAACCAATTAAAACCAATA+AGG - chr2_1:694869-694888 None:intergenic 25.0%
!!! TTGGTTTTAATTGGTTGAAA+AGG + chr2_1:694871-694890 Msa0186060:intron 25.0%
!!! TTTTTTCTATGTGCTTTTGA+AGG - chr2_1:694995-695014 None:intergenic 25.0%
! AGCACATAGAAAAAATTTAC+CGG + chr2_1:695000-695019 Msa0186060:CDS 25.0%
!!! TGAAGAAGATTTTGATGAAA+CGG + chr2_1:695290-695309 Msa0186060:CDS 25.0%
!!! ATCAAGTTTAGAGTTTTCAT+CGG - chr2_1:695376-695395 None:intergenic 25.0%
! CATTAATGCTTGAAATTAGT+AGG - chr2_1:695554-695573 None:intergenic 25.0%
! CTACTAATTTCAAGCATTAA+TGG + chr2_1:695552-695571 Msa0186060:intron 25.0%
! CACAAAAAAATGCAACTATA+TGG - chr2_1:695634-695653 None:intergenic 25.0%
! TTATGTATGTTAATGTTGGT+AGG + chr2_1:695839-695858 Msa0186060:intron 25.0%
!! TCGAATTTAGATGATTTTGT+TGG + chr2_1:695930-695949 Msa0186060:CDS 25.0%
! TAAAAAGAAATTCCAGAACT+TGG - chr2_1:696464-696483 None:intergenic 25.0%
! ATATAATACAAAACTCAGAC+CGG - chr2_1:696930-696949 None:intergenic 25.0%
!!! TGATGATACTCGTTTTTTTT+TGG + chr2_1:697135-697154 Msa0186060:three_prime_UTR 25.0%
!!! GTTTTTTTGACAAGCAAGAA+AGG + chr2_1:685590-685609 Msa0186060:five_prime_UTR 30.0%
! GAATTCAAAACTCTAAGAAG+CGG - chr2_1:685913-685932 None:intergenic 30.0%
!! TGATCCTTTTTCGTTTATGA+AGG + chr2_1:686180-686199 Msa0186060:intron 30.0%
CATTCCTTCATAAACGAAAA+AGG - chr2_1:686187-686206 None:intergenic 30.0%
! TCAATTTCTTCTAGCAGTTT+TGG - chr2_1:686357-686376 None:intergenic 30.0%
TGTAGGATAAAAACTCTATC+TGG - chr2_1:686552-686571 None:intergenic 30.0%
AACTACGATAACATTCTCAT+TGG - chr2_1:686698-686717 None:intergenic 30.0%
CATAGACATATTGTTGAACT+TGG + chr2_1:686870-686889 Msa0186060:intron 30.0%
AAATTGGCATGTAAAATCCT+GGG - chr2_1:687188-687207 None:intergenic 30.0%
AAAATTGGCATGTAAAATCC+TGG - chr2_1:687189-687208 None:intergenic 30.0%
! TGCCAATTTTTGTTAAGGTA+TGG + chr2_1:687199-687218 Msa0186060:intron 30.0%
CACCATACCTTAACAAAAAT+TGG - chr2_1:687204-687223 None:intergenic 30.0%
TGGCTTAATCATATGTGATT+TGG + chr2_1:687332-687351 Msa0186060:intron 30.0%
TTTCCATATGTATGTGTTCA+TGG + chr2_1:687392-687411 Msa0186060:intron 30.0%
AATCCATGAACACATACATA+TGG - chr2_1:687398-687417 None:intergenic 30.0%
ATATGTATGTGTTCATGGAT+TGG + chr2_1:687397-687416 Msa0186060:intron 30.0%
! ATTGGCTTAATCATGTGATT+TGG + chr2_1:687415-687434 Msa0186060:intron 30.0%
GCATACAAAATCACATACTT+GGG - chr2_1:687680-687699 None:intergenic 30.0%
! CAAGTATGTGATTTTGTATG+CGG + chr2_1:687679-687698 Msa0186060:intron 30.0%
! TGAAATCTGGTATTGAAAAC+AGG - chr2_1:687780-687799 None:intergenic 30.0%
! TTAACACTTTCCTTATTTGC+AGG + chr2_1:688005-688024 Msa0186060:intron 30.0%
! TGATCAACTTTTACAGTAAG+CGG - chr2_1:688042-688061 None:intergenic 30.0%
! TGTAAAAGTTGATCACCTTA+AGG + chr2_1:688047-688066 Msa0186060:intron 30.0%
ATCAATAAAGACATGCCTTA+AGG - chr2_1:688065-688084 None:intergenic 30.0%
CAAAGATGATGACATCATAA+AGG + chr2_1:688200-688219 Msa0186060:CDS 30.0%
CAATAAATGCAAGCACAAAA+GGG - chr2_1:688326-688345 None:intergenic 30.0%
ATTTATTGGAACATGGGAAT+GGG + chr2_1:688338-688357 Msa0186060:intron 30.0%
CACAGCACATAAATAAACAA+AGG - chr2_1:688382-688401 None:intergenic 30.0%
!! TTTGTTTTCATTGCTTTGCT+AGG + chr2_1:688402-688421 Msa0186060:intron 30.0%
!!! ATTGCTTTGCTAGGATTTTT+TGG + chr2_1:688411-688430 Msa0186060:intron 30.0%
!!! TTCTCTGTCATTTTGTACTA+TGG - chr2_1:689259-689278 None:intergenic 30.0%
TGTATATCATTGTTCAAGCT+AGG + chr2_1:689290-689309 Msa0186060:intron 30.0%
! TCTACCATCTTTTCTACTAT+AGG - chr2_1:689564-689583 None:intergenic 30.0%
!!! CTACTTTTTCTTTGCAGAAA+AGG + chr2_1:689840-689859 Msa0186060:intron 30.0%
ATAACACACTATAAATCCTG+CGG + chr2_1:690189-690208 Msa0186060:intron 30.0%
ATAAAACAACACTTCCTTGA+AGG - chr2_1:690292-690311 None:intergenic 30.0%
! TAACTGAAGTACTTAGTATG+TGG + chr2_1:690858-690877 Msa0186060:intron 30.0%
!! TATGTGGTTGGTATATGTTT+TGG + chr2_1:690874-690893 Msa0186060:intron 30.0%
! TAGGTGATTTTACATATCCA+AGG + chr2_1:690963-690982 Msa0186060:CDS 30.0%
AAGTTTGTGTGAATTATTGC+AGG + chr2_1:691341-691360 Msa0186060:intron 30.0%
GCAATTGAAGAAAAGATAAG+TGG + chr2_1:691378-691397 Msa0186060:CDS 30.0%
GCTGCTCATTTAACAAATAA+CGG - chr2_1:691413-691432 None:intergenic 30.0%
TTTGTTAAATGAGCAGCTTA+AGG + chr2_1:691416-691435 Msa0186060:CDS 30.0%
GGTAAATATCCTTCATGATT+TGG + chr2_1:691449-691468 Msa0186060:intron 30.0%
AGGTTCAACACATAGAATTA+GGG - chr2_1:691726-691745 None:intergenic 30.0%
ATTATAACTGCACTTGTGTT+AGG - chr2_1:691839-691858 None:intergenic 30.0%
TTTGTTCTATTTGCAGGAAT+TGG + chr2_1:691943-691962 Msa0186060:intron 30.0%
TTGTTCTATTTGCAGGAATT+GGG + chr2_1:691944-691963 Msa0186060:intron 30.0%
ACTAAATATGTTCACCTAAC+TGG + chr2_1:692142-692161 Msa0186060:intron 30.0%
TTGTTTGTGCTTTAGTCTAT+AGG + chr2_1:692274-692293 Msa0186060:intron 30.0%
! CTTTAGTCTATAGGTTTTTC+TGG + chr2_1:692283-692302 Msa0186060:intron 30.0%
! TCTATAACTTGTAACACATG+AGG - chr2_1:692412-692431 None:intergenic 30.0%
ATTCTTGATGAAGACCATTA+TGG + chr2_1:692785-692804 Msa0186060:intron 30.0%
CTTCATCAGTTAATCCATAA+TGG - chr2_1:692802-692821 None:intergenic 30.0%
AATTAACAGATTCAGACTCA+TGG - chr2_1:692918-692937 None:intergenic 30.0%
ATTCTTGATGAAGACCATTA+CGG + chr2_1:692785-692804 Msa0186060:intron 30.0%
TGATGTGAAGGAAAGAATAT+TGG + chr2_1:693012-693031 Msa0186060:CDS 30.0%
ATATTGGAATTCATAGCTGT+TGG + chr2_1:693028-693047 Msa0186060:CDS 30.0%
TATTGGAATTCATAGCTGTT+GGG + chr2_1:693029-693048 Msa0186060:CDS 30.0%
TGTGATTAATGTCTACCAAA+TGG + chr2_1:693193-693212 Msa0186060:intron 30.0%
ATCGAGATATATGGTGATTT+AGG - chr2_1:693261-693280 None:intergenic 30.0%
!!! GTGCTATTGGTTATTTTAAC+TGG + chr2_1:693350-693369 Msa0186060:intron 30.0%
!! AATGACTGAATTTTAAAGGC+GGG - chr2_1:693647-693666 None:intergenic 30.0%
TCCTGATCTTTCTTATATAC+AGG + chr2_1:693807-693826 Msa0186060:intron 30.0%
TCCTGTATATAAGAAAGATC+AGG - chr2_1:693811-693830 None:intergenic 30.0%
GGAAAAATTATCTGTCTTTC+TGG + chr2_1:693828-693847 Msa0186060:intron 30.0%
ATAAATCTGTTTCCTTCACT+AGG + chr2_1:693964-693983 Msa0186060:intron 30.0%
TTGATACCAGTTATATAGTG+TGG + chr2_1:693992-694011 Msa0186060:intron 30.0%
ATCAATCAATACAAGAGGAT+TGG - chr2_1:694122-694141 None:intergenic 30.0%
GCATTATATTTATTAGGACC+AGG - chr2_1:694234-694253 None:intergenic 30.0%
!!! AAGGTTGGTTTTTGATAATC+TGG + chr2_1:694466-694485 Msa0186060:intron 30.0%
!!! AGGTTGGTTTTTGATAATCT+GGG + chr2_1:694467-694486 Msa0186060:intron 30.0%
!!! ATGTGCCAATTTTGATTTCA+GGG - chr2_1:694553-694572 None:intergenic 30.0%
!!! AATGTGCCAATTTTGATTTC+AGG - chr2_1:694554-694573 None:intergenic 30.0%
ACCAATAAGGCAATAAAAGA+TGG - chr2_1:694856-694875 None:intergenic 30.0%
!! TACACAAATTAACTTGCTAC+AGG + chr2_1:694902-694921 Msa0186060:intron 30.0%
CATAGAAAAAATTTACCGGA+AGG + chr2_1:695004-695023 Msa0186060:CDS 30.0%
AAAAAATACTACAGACCTTC+CGG - chr2_1:695022-695041 None:intergenic 30.0%
! GAGATATGCTATGATTTGTA+TGG + chr2_1:695077-695096 Msa0186060:intron 30.0%
GTCCTGAAATATTCTGTTTA+TGG + chr2_1:695197-695216 Msa0186060:intron 30.0%
TGCCATAAACAGAATATTTC+AGG - chr2_1:695202-695221 None:intergenic 30.0%
AAATCTTCTTCAGCTTTCTT+TGG - chr2_1:695282-695301 None:intergenic 30.0%
!! GAAGAAGATTTTGATGAAAC+GGG + chr2_1:695291-695310 Msa0186060:CDS 30.0%
GTACTACTACCATTCAAAAA+GGG + chr2_1:695313-695332 Msa0186060:CDS 30.0%
CGATAAATCTACAGATATTG+AGG + chr2_1:695440-695459 Msa0186060:CDS 30.0%
TTAAGCGGCAAAATATTATG+AGG + chr2_1:695690-695709 Msa0186060:intron 30.0%
GTTATTGAAACACAAGATCT+TGG - chr2_1:695741-695760 None:intergenic 30.0%
! GGAAAAAATAGTTTGTGTAG+TGG - chr2_1:695763-695782 None:intergenic 30.0%
!! AATTTGTTAATCATTAGCGG+TGG - chr2_1:695813-695832 None:intergenic 30.0%
AAAAGAAAGAGAGGAAGATA+AGG + chr2_1:695866-695885 Msa0186060:CDS 30.0%
ATCTTTGATCAAACACCTAT+TGG + chr2_1:695978-695997 Msa0186060:CDS 30.0%
TTTAGTCTCTATATACAGTG+TGG - chr2_1:696042-696061 None:intergenic 30.0%
AGACTAAATCTGTTGAACAA+GGG + chr2_1:696054-696073 Msa0186060:CDS 30.0%
! TTTTAGTCATGTAGGAACTT+TGG + chr2_1:696556-696575 Msa0186060:intron 30.0%
! ATTTCTTTTTGCATTGTGTC+TGG + chr2_1:696622-696641 Msa0186060:intron 30.0%
CTATATGCAGATCTTTGATT+TGG + chr2_1:696810-696829 Msa0186060:CDS 30.0%
! ATGTTTTTCTCTTTTAAGCC+TGG + chr2_1:697013-697032 Msa0186060:three_prime_UTR 30.0%
! CAAATTTTCCTTTCTTGTCG+CGG - chr2_1:685570-685589 None:intergenic 35.0%
! ACAAGCAAGAAAGGACATTT+TGG + chr2_1:685599-685618 Msa0186060:five_prime_UTR 35.0%
!! GAAAGGACATTTTGGTCATT+TGG + chr2_1:685607-685626 Msa0186060:five_prime_UTR 35.0%
!! GAGAATTGAATGGGTTTTGA+CGG - chr2_1:685741-685760 None:intergenic 35.0%
GTGAACGTGTGAATTGAATT+GGG - chr2_1:685787-685806 None:intergenic 35.0%
TGAGCTTCAACATTGGATTA+GGG - chr2_1:685816-685835 None:intergenic 35.0%
ATGAGCTTCAACATTGGATT+AGG - chr2_1:685817-685836 None:intergenic 35.0%
GATGAAATGAGCTTCAACAT+TGG - chr2_1:685823-685842 None:intergenic 35.0%
!!! AGAGTTTTGAATTCTCTCAG+CGG + chr2_1:685919-685938 Msa0186060:CDS 35.0%
!!! AGGGAGAGTATTTTTCTGTT+CGG + chr2_1:685969-685988 Msa0186060:CDS 35.0%
! AGTATTTTTCTGTTCGGAGT+CGG + chr2_1:685975-685994 Msa0186060:CDS 35.0%
! ATAGGTGTTGTACTGTTGTT+TGG + chr2_1:686309-686328 Msa0186060:intron 35.0%
! TAGGTGTTGTACTGTTGTTT+GGG + chr2_1:686310-686329 Msa0186060:intron 35.0%
TTATAGTGGCACTATAGCAT+TGG + chr2_1:686432-686451 Msa0186060:intron 35.0%
! GCAATTGACAACACTAGTTT+CGG + chr2_1:686496-686515 Msa0186060:intron 35.0%
! CAATTGACAACACTAGTTTC+GGG + chr2_1:686497-686516 Msa0186060:intron 35.0%
! TGTTATCGTAGTTTTCTGTC+CGG + chr2_1:686705-686724 Msa0186060:intron 35.0%
AGTATGTCGACATAAGAGTT+CGG - chr2_1:686824-686843 None:intergenic 35.0%
ACATACTCACCATCTAAATG+AGG + chr2_1:686837-686856 Msa0186060:intron 35.0%
TTGACTCAACCTCATTTAGA+TGG - chr2_1:686849-686868 None:intergenic 35.0%
!! ATGACACTTTTAAGTCATGC+TGG + chr2_1:686894-686913 Msa0186060:intron 35.0%
ATAGGACACGACAAAGTTTA+GGG - chr2_1:686991-687010 None:intergenic 35.0%
TATAGGACACGACAAAGTTT+AGG - chr2_1:686992-687011 None:intergenic 35.0%
TTGATGAAAGAGGGTAGTAT+AGG - chr2_1:687009-687028 None:intergenic 35.0%
AAAAGAGGTCTATGTTGCAA+CGG - chr2_1:687165-687184 None:intergenic 35.0%
ATGTAAAATCCTGGGAAAAG+AGG - chr2_1:687180-687199 None:intergenic 35.0%
!! GATTATTTTTCCATGCATCC+AGG + chr2_1:687468-687487 Msa0186060:intron 35.0%
TGTAAAGCTGCCAATAGTTT+GGG - chr2_1:687496-687515 None:intergenic 35.0%
TCAGAGCTAGATACTACATT+GGG - chr2_1:687586-687605 None:intergenic 35.0%
TTTAACCGTCTTCATGAAGT+TGG + chr2_1:687646-687665 Msa0186060:CDS 35.0%
TTAACCGTCTTCATGAAGTT+GGG + chr2_1:687647-687666 Msa0186060:CDS 35.0%
CGCATACAAAATCACATACT+TGG - chr2_1:687681-687700 None:intergenic 35.0%
! TACCAGATTTCAAGTATCCA+TGG + chr2_1:687788-687807 Msa0186060:intron 35.0%
! ACCAGATTTCAAGTATCCAT+GGG + chr2_1:687789-687808 Msa0186060:intron 35.0%
! GATCAACTTTTACAGTAAGC+GGG - chr2_1:688041-688060 None:intergenic 35.0%
CCAATAAATGCAAGCACAAA+AGG - chr2_1:688327-688346 None:intergenic 35.0%
! CCTTTTGTGCTTGCATTTAT+TGG + chr2_1:688324-688343 Msa0186060:intron 35.0%
TGCTTGCATTTATTGGAACA+TGG + chr2_1:688331-688350 Msa0186060:intron 35.0%
GCTTGCATTTATTGGAACAT+GGG + chr2_1:688332-688351 Msa0186060:intron 35.0%
CATTTATTGGAACATGGGAA+TGG + chr2_1:688337-688356 Msa0186060:intron 35.0%
TTTATTGGAACATGGGAATG+GGG + chr2_1:688339-688358 Msa0186060:intron 35.0%
TAAGGGGCAGAAACTATTAA+AGG - chr2_1:688451-688470 None:intergenic 35.0%
ATATGAAGTCAACTCATTCG+GGG - chr2_1:688672-688691 None:intergenic 35.0%
CATATGAAGTCAACTCATTC+GGG - chr2_1:688673-688692 None:intergenic 35.0%
CCATATGAAGTCAACTCATT+CGG - chr2_1:688674-688693 None:intergenic 35.0%
TAACATTAGGGTTGTTTGCA+TGG - chr2_1:688703-688722 None:intergenic 35.0%
! TGATGCCTAGAGAGATTTTA+TGG + chr2_1:688801-688820 Msa0186060:intron 35.0%
CATCTCCATAAAATCTCTCT+AGG - chr2_1:688809-688828 None:intergenic 35.0%
TGGTGCAATCCTATTGTTAT+GGG - chr2_1:688938-688957 None:intergenic 35.0%
TTGGTGCAATCCTATTGTTA+TGG - chr2_1:688939-688958 None:intergenic 35.0%
ATAACAATAGGATTGCACCA+AGG + chr2_1:688938-688957 Msa0186060:intron 35.0%
TAACAATAGGATTGCACCAA+GGG + chr2_1:688939-688958 Msa0186060:intron 35.0%
AGTAAAAAGGTAAGGGCTTA+GGG - chr2_1:688969-688988 None:intergenic 35.0%
AAGTAAAAAGGTAAGGGCTT+AGG - chr2_1:688970-688989 None:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG - chr2_1:689041-689060 None:intergenic 35.0%
TAGAAGCAAGACATAGTACA+TGG + chr2_1:689140-689159 Msa0186060:intron 35.0%
TGGAATGTAACTTCAGCAAA+AGG + chr2_1:689160-689179 Msa0186060:intron 35.0%
TTCAAGCTAGGTAGTTGAAA+TGG + chr2_1:689302-689321 Msa0186060:intron 35.0%
!! AGTACTCTGCTTAAGTTGAA+AGG + chr2_1:689357-689376 Msa0186060:intron 35.0%
!! TAAGATTAGACGGATTAGGT+AGG + chr2_1:689503-689522 Msa0186060:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG + chr2_1:689557-689576 Msa0186060:intron 35.0%
AGATGGTAGAAAATAGGCTT+AGG + chr2_1:689574-689593 Msa0186060:intron 35.0%
AGTCAGATCAAAAGATGTAG+AGG + chr2_1:689663-689682 Msa0186060:intron 35.0%
!!! AGCAATGTCGGCATTTTTTA+GGG - chr2_1:689924-689943 None:intergenic 35.0%
!!! TAGCAATGTCGGCATTTTTT+AGG - chr2_1:689925-689944 None:intergenic 35.0%
TAAAAAATGCCGACATTGCT+AGG + chr2_1:689924-689943 Msa0186060:intron 35.0%
TTGCATCCTGAATCTAAGTT+TGG + chr2_1:690073-690092 Msa0186060:intron 35.0%
ACTTCACCAAACTTAGATTC+AGG - chr2_1:690082-690101 None:intergenic 35.0%
! TCTAAGTTTGGTGAAGTCTT+TGG + chr2_1:690085-690104 Msa0186060:intron 35.0%
!! GAAATTTACTCTGAAGTGCA+CGG + chr2_1:690251-690270 Msa0186060:intron 35.0%
CAAACTGTATGAGAAACAAG+AGG - chr2_1:690343-690362 None:intergenic 35.0%
GGACTCATTAATGCTTATGT+AGG - chr2_1:690790-690809 None:intergenic 35.0%
!! ACAAGAAAAGGCACTTAGTA+CGG - chr2_1:690811-690830 None:intergenic 35.0%
! TGAAGTACTTAGTATGTGGT+TGG + chr2_1:690862-690881 Msa0186060:intron 35.0%
TCGTTAATTGTGCAGCATAT+AGG + chr2_1:690944-690963 Msa0186060:intron 35.0%
!!! ATTTTGGAGCTGCAATATCT+GGG + chr2_1:690993-691012 Msa0186060:CDS 35.0%
!! CATTTGTTGTGTTGTTGAAC+AGG + chr2_1:691191-691210 Msa0186060:intron 35.0%
ATTGAAACTTACACTCGAGT+TGG + chr2_1:691224-691243 Msa0186060:CDS 35.0%
GATGGAAATCAGTAAGATTC+AGG + chr2_1:691257-691276 Msa0186060:CDS 35.0%
AGAGAAAAACAAGCTTGTCT+AGG - chr2_1:691497-691516 None:intergenic 35.0%
CATAAAGGATTCTACAATGG+AGG - chr2_1:691572-691591 None:intergenic 35.0%
GTAGAATCCTTTATGTTAGC+AGG + chr2_1:691577-691596 Msa0186060:intron 35.0%
ACAGTATCCTGCTAACATAA+AGG - chr2_1:691587-691606 None:intergenic 35.0%
GGTTCAACACATAGAATTAG+GGG - chr2_1:691725-691744 None:intergenic 35.0%
CAGGTTCAACACATAGAATT+AGG - chr2_1:691727-691746 None:intergenic 35.0%
AACTCATGATTGACAGTTCA+CGG + chr2_1:691747-691766 Msa0186060:intron 35.0%
AGACGTTATAGTTTATCCTG+TGG + chr2_1:691777-691796 Msa0186060:intron 35.0%
!! AGGAAGTTTTGGTGTGATTT+AGG + chr2_1:691803-691822 Msa0186060:intron 35.0%
CACTTGTGTTAGGATATCAA+AGG - chr2_1:691829-691848 None:intergenic 35.0%
!!! TTCGGGGTTGAAATCTTTTT+TGG + chr2_1:692109-692128 Msa0186060:intron 35.0%
! TTTCAGGTAAATTCAGGGAA+AGG + chr2_1:692359-692378 Msa0186060:intron 35.0%
! TAACTTGTAACACATGAGGT+GGG - chr2_1:692408-692427 None:intergenic 35.0%
! ATAACTTGTAACACATGAGG+TGG - chr2_1:692409-692428 None:intergenic 35.0%
TGTGTTACAAGTTATAGACG+AGG + chr2_1:692414-692433 Msa0186060:CDS 35.0%
! GCATAATTTTCATAGGCTCT+TGG + chr2_1:692668-692687 Msa0186060:intron 35.0%
ATGAGAACTTTCATGTCACT+CGG + chr2_1:692753-692772 Msa0186060:intron 35.0%
! GCATAATTTTCATAGGCTCT+TGG + chr2_1:692668-692687 Msa0186060:intron 35.0%
ATGAGAACTTTCATGTCACT+CGG + chr2_1:692753-692772 Msa0186060:intron 35.0%
TCACATCAGTTAATCCGTAA+TGG - chr2_1:693000-693019 None:intergenic 35.0%
! TTACGGATTAACTGATGTGA+AGG + chr2_1:693000-693019 Msa0186060:CDS 35.0%
TCACTTATGTATTGTACCTC+AGG + chr2_1:693084-693103 Msa0186060:intron 35.0%
! TATTGTACCTCAGGTTTTTC+TGG + chr2_1:693093-693112 Msa0186060:intron 35.0%
! ATTGTACCTCAGGTTTTTCT+GGG + chr2_1:693094-693113 Msa0186060:intron 35.0%
TCACAGATCAACATTTAGCA+GGG - chr2_1:693178-693197 None:intergenic 35.0%
ATCACAGATCAACATTTAGC+AGG - chr2_1:693179-693198 None:intergenic 35.0%
!! AAATTGGGCATCGAGATATA+TGG - chr2_1:693270-693289 None:intergenic 35.0%
GTCCAAAATTCAGTCATGAT+AGG + chr2_1:693464-693483 Msa0186060:intron 35.0%
! TGCCTATCATGACTGAATTT+TGG - chr2_1:693469-693488 None:intergenic 35.0%
CGTACAATACATCAATTGGT+GGG - chr2_1:693528-693547 None:intergenic 35.0%
!! ATGACTGAATTTTAAAGGCG+GGG - chr2_1:693646-693665 None:intergenic 35.0%
ATACCAGTTATATAGTGTGG+TGG + chr2_1:693995-694014 Msa0186060:intron 35.0%
GTACAATGCCTTAAGAATGT+GGG + chr2_1:694091-694110 Msa0186060:CDS 35.0%
! TTCAATTGATAGTTGGGCAA+AGG + chr2_1:694343-694362 Msa0186060:intron 35.0%
AGAAAATTAGCATTCTGCTC+GGG - chr2_1:694412-694431 None:intergenic 35.0%
CAGAAAATTAGCATTCTGCT+CGG - chr2_1:694413-694432 None:intergenic 35.0%
!! TTGGTTTTTGATAATCTGGG+TGG + chr2_1:694470-694489 Msa0186060:intron 35.0%
GAGTACCCTGAAATCAAAAT+TGG + chr2_1:694545-694564 Msa0186060:intron 35.0%
TAGCAATTCATTGCAGGAAA+AGG - chr2_1:694823-694842 None:intergenic 35.0%
TTATGCTAGCAATTCATTGC+AGG - chr2_1:694829-694848 None:intergenic 35.0%
! GCCATCTTTTATTGCCTTAT+TGG + chr2_1:694852-694871 Msa0186060:intron 35.0%
!! ACAAATTAACTTGCTACAGG+TGG + chr2_1:694905-694924 Msa0186060:intron 35.0%
GGTACTACTACCATTCAAAA+AGG + chr2_1:695312-695331 Msa0186060:CDS 35.0%
ATTGCTACTCTCTATCAACA+CGG - chr2_1:695343-695362 None:intergenic 35.0%
TTTGCCAACAATCGTACAAT+TGG + chr2_1:695656-695675 Msa0186060:intron 35.0%
TGTACCAATTGTACGATTGT+TGG - chr2_1:695663-695682 None:intergenic 35.0%
CAATCGTACAATTGGTACAA+CGG + chr2_1:695664-695683 Msa0186060:intron 35.0%
!! TTGGTACAACGGTTTTTAAG+CGG + chr2_1:695675-695694 Msa0186060:intron 35.0%
TAAAAGTAAGGTTGCACAGA+AGG - chr2_1:695784-695803 None:intergenic 35.0%
!! TGTGCAACCTTACTTTTATG+TGG + chr2_1:695786-695805 Msa0186060:intron 35.0%
GTAGGTTACAAAAGAAAGAG+AGG + chr2_1:695857-695876 Msa0186060:intron 35.0%
GAGACTAAATCTGTTGAACA+AGG + chr2_1:696053-696072 Msa0186060:CDS 35.0%
GACTAAATCTGTTGAACAAG+GGG + chr2_1:696055-696074 Msa0186060:CDS 35.0%
CATTACATCTCCTAATTGAC+CGG - chr2_1:696105-696124 None:intergenic 35.0%
CAATTGCCAGAGATATACTA+CGG + chr2_1:696150-696169 Msa0186060:CDS 35.0%
AATTGCCAGAGATATACTAC+GGG + chr2_1:696151-696170 Msa0186060:CDS 35.0%
ATGGAGGTGAAACTTTGTAT+TGG - chr2_1:696204-696223 None:intergenic 35.0%
TTTGTGCTCGTCATCTTTAA+TGG + chr2_1:696428-696447 Msa0186060:intron 35.0%
AGAAAACTATTGCTGCAAGA+AGG + chr2_1:696686-696705 Msa0186060:CDS 35.0%
! AAATCTCTCTTATTTGCCGA+AGG - chr2_1:696736-696755 None:intergenic 35.0%
CTAGCACCTAATGTAAAAGA+AGG + chr2_1:696763-696782 Msa0186060:CDS 35.0%
! TCGAGACCTTCTTTTACATT+AGG - chr2_1:696772-696791 None:intergenic 35.0%
!!! CAGATCTTTGATTTGGCTTT+TGG + chr2_1:696817-696836 Msa0186060:CDS 35.0%
GAGAAGTAAATCACTAATGC+CGG + chr2_1:696862-696881 Msa0186060:exon 35.0%
! AACGAGATTTTCTATTGAGC+TGG + chr2_1:696901-696920 Msa0186060:three_prime_UTR 35.0%
! ACGAGATTTTCTATTGAGCT+GGG + chr2_1:696902-696921 Msa0186060:three_prime_UTR 35.0%
! AACATATTTTGCCCTGAACA+CGG - chr2_1:696998-697017 None:intergenic 35.0%
CGCGACAAGAAAGGAAAATT+TGG + chr2_1:685568-685587 Msa0186060:five_prime_UTR 40.0%
TTTGGTCATTTGGATAGACG+AGG + chr2_1:685617-685636 Msa0186060:five_prime_UTR 40.0%
TTGGTCATTTGGATAGACGA+GGG + chr2_1:685618-685637 Msa0186060:five_prime_UTR 40.0%
GATAGACGAGGGTTTATGAA+GGG + chr2_1:685629-685648 Msa0186060:five_prime_UTR 40.0%
!! AATTGAATGGGTTTTGACGG+TGG - chr2_1:685738-685757 None:intergenic 40.0%
GGTGAACGTGTGAATTGAAT+TGG - chr2_1:685788-685807 None:intergenic 40.0%
! CAACATTGGATTAGGGGATT+AGG - chr2_1:685809-685828 None:intergenic 40.0%
! GAGCTTCAACATTGGATTAG+GGG - chr2_1:685815-685834 None:intergenic 40.0%
AGTCGGAGTCATCGTTATTT+GGG + chr2_1:685946-685965 Msa0186060:CDS 40.0%
TTCAGCATCAACCACATGAT+CGG - chr2_1:686016-686035 None:intergenic 40.0%
!! GATTACCTCACTGTTGGTTT+CGG + chr2_1:686108-686127 Msa0186060:intron 40.0%
AAATTCCGAAACCAACAGTG+AGG - chr2_1:686116-686135 None:intergenic 40.0%
! TCTGTTTGATGTTGCTTCGA+TGG + chr2_1:686630-686649 Msa0186060:intron 40.0%
! CTGTTTGATGTTGCTTCGAT+GGG + chr2_1:686631-686650 Msa0186060:intron 40.0%
!!! ATGCTGGTTTGCGTTTGTTT+TGG + chr2_1:686910-686929 Msa0186060:intron 40.0%
!!! TGCTGGTTTGCGTTTGTTTT+GGG + chr2_1:686911-686930 Msa0186060:intron 40.0%
! CAAAGTTTAGGGCAGCAATA+GGG - chr2_1:686980-686999 None:intergenic 40.0%
! ACAAAGTTTAGGGCAGCAAT+AGG - chr2_1:686981-687000 None:intergenic 40.0%
!! ATCAGGAGGTTGATGAAAGA+GGG - chr2_1:687018-687037 None:intergenic 40.0%
!! AATCAGGAGGTTGATGAAAG+AGG - chr2_1:687019-687038 None:intergenic 40.0%
TTTCTCCTTTCTGTTGGATC+AGG + chr2_1:687128-687147 Msa0186060:intron 40.0%
CAAAACCTGATCCAACAGAA+AGG - chr2_1:687136-687155 None:intergenic 40.0%
! CTTTCTGTTGGATCAGGTTT+TGG + chr2_1:687134-687153 Msa0186060:intron 40.0%
TATCCGTCTTTGCTCATTAC+AGG + chr2_1:687248-687267 Msa0186060:intron 40.0%
AAGCCTGTAATGAGCAAAGA+CGG - chr2_1:687254-687273 None:intergenic 40.0%
TCAGTGCATGTATGTGTTCA+TGG + chr2_1:687307-687326 Msa0186060:intron 40.0%
GCATGTATGTGTTCATGGAT+TGG + chr2_1:687312-687331 Msa0186060:intron 40.0%
GTAAAGCTGCCAATAGTTTG+GGG - chr2_1:687495-687514 None:intergenic 40.0%
CTGTAAAGCTGCCAATAGTT+TGG - chr2_1:687497-687516 None:intergenic 40.0%
CAAACTATTGGCAGCTTTAC+AGG + chr2_1:687495-687514 Msa0186060:CDS 40.0%
GTCAGAGCTAGATACTACAT+TGG - chr2_1:687587-687606 None:intergenic 40.0%
! CCAGATTTCAAGTATCCATG+GGG + chr2_1:687790-687809 Msa0186060:intron 40.0%
!!! TGACTTTTACTTGGTGTTGC+AGG + chr2_1:688164-688183 Msa0186060:intron 40.0%
TGATATGACCTCGAAAGATG+TGG - chr2_1:688226-688245 None:intergenic 40.0%
TCGAGGTCATATCAACACTA+AGG + chr2_1:688232-688251 Msa0186060:CDS 40.0%
CGAGGTCATATCAACACTAA+GGG + chr2_1:688233-688252 Msa0186060:CDS 40.0%
TCATGTTGCGACTTACTCTA+AGG + chr2_1:688287-688306 Msa0186060:CDS 40.0%
TATGAAGTCAACTCATTCGG+GGG - chr2_1:688671-688690 None:intergenic 40.0%
! CCGAATGAGTTGACTTCATA+TGG + chr2_1:688671-688690 Msa0186060:intron 40.0%
! CTCAAGGCACTCTAACATTA+GGG - chr2_1:688715-688734 None:intergenic 40.0%
! TCTCAAGGCACTCTAACATT+AGG - chr2_1:688716-688735 None:intergenic 40.0%
TGGAGATGCCTAGAGAATAA+AGG + chr2_1:688821-688840 Msa0186060:intron 40.0%
GGAGATGCCTAGAGAATAAA+GGG + chr2_1:688822-688841 Msa0186060:intron 40.0%
GAGATGCCTAGAGAATAAAG+GGG + chr2_1:688823-688842 Msa0186060:intron 40.0%
TCCTAACCCCTTTATTCTCT+AGG - chr2_1:688832-688851 None:intergenic 40.0%
AGCTATCAAGGATGTGTATG+AGG + chr2_1:688865-688884 Msa0186060:intron 40.0%
GCTATCAAGGATGTGTATGA+GGG + chr2_1:688866-688885 Msa0186060:intron 40.0%
TAGTCATGCTTGAAGAGTTG+AGG + chr2_1:689066-689085 Msa0186060:intron 40.0%
AGTCATGCTTGAAGAGTTGA+GGG + chr2_1:689067-689086 Msa0186060:intron 40.0%
AGTTGAGGGAGGAACTAAAT+GGG + chr2_1:689081-689100 Msa0186060:intron 40.0%
ATGTCTTGCTTCTACTCAAG+CGG - chr2_1:689134-689153 None:intergenic 40.0%
CAAAAGGTGAAGTTCTACCT+TGG + chr2_1:689176-689195 Msa0186060:intron 40.0%
ATATCCAACTTTCACCTCCA+AGG - chr2_1:689196-689215 None:intergenic 40.0%
GTCAGACTAGTGATGTTGTA+TGG + chr2_1:689399-689418 Msa0186060:intron 40.0%
GGATGAGTGGTAAGATTAGA+CGG + chr2_1:689493-689512 Msa0186060:intron 40.0%
! GTGGTAAGATTAGACGGATT+AGG + chr2_1:689499-689518 Msa0186060:intron 40.0%
ACCATTAGAGAGAGAGAGTT+GGG + chr2_1:689532-689551 Msa0186060:intron 40.0%
TGGTAGAAAATAGGCTTAGG+TGG + chr2_1:689577-689596 Msa0186060:intron 40.0%
AGTACGAAGAGTAGATCAGA+TGG + chr2_1:689635-689654 Msa0186060:intron 40.0%
ATCAAAAGATGTAGAGGCAG+AGG + chr2_1:689669-689688 Msa0186060:intron 40.0%
AACTCACACACACAAATGTG+AGG - chr2_1:689982-690001 None:intergenic 40.0%
!!! ATGCTTGCCATTTTGTCTAC+AGG + chr2_1:690009-690028 Msa0186060:intron 40.0%
! TTTTGGGCCTGTAGACAAAA+TGG - chr2_1:690019-690038 None:intergenic 40.0%
GCAAATTGATGCACAGCTTA+GGG - chr2_1:690057-690076 None:intergenic 40.0%
TGCAAATTGATGCACAGCTT+AGG - chr2_1:690058-690077 None:intergenic 40.0%
AGGTAAAATAACGAAACCGC+AGG - chr2_1:690208-690227 None:intergenic 40.0%
! TGCATTGTTGTTGTCCTTCA+AGG + chr2_1:690275-690294 Msa0186060:intron 40.0%
! TATCCAAGGCTAGCAGATTT+TGG + chr2_1:690977-690996 Msa0186060:CDS 40.0%
!!! GATTTTGGAGCTGCAATATC+TGG + chr2_1:690992-691011 Msa0186060:CDS 40.0%
!!! TTTTGGAGCTGCAATATCTG+GGG + chr2_1:690994-691013 Msa0186060:CDS 40.0%
! CTAGCTCTTCAAGAACTTGT+TGG - chr2_1:691036-691055 None:intergenic 40.0%
!! CGAGTTGGTAAAGAAAGAGA+TGG + chr2_1:691239-691258 Msa0186060:CDS 40.0%
! ACAAGCTTGTCTAGGATTTG+AGG - chr2_1:691489-691508 None:intergenic 40.0%
GAACTGTCAATCATGAGTTC+AGG - chr2_1:691746-691765 None:intergenic 40.0%
TATAGTTTATCCTGTGGTCG+AGG + chr2_1:691783-691802 Msa0186060:intron 40.0%
! GTTTGTTTCTCGAAGGACTT+CGG + chr2_1:692091-692110 Msa0186060:intron 40.0%
! TTTGTTTCTCGAAGGACTTC+GGG + chr2_1:692092-692111 Msa0186060:intron 40.0%
TCAACCAGTCCAAGTAGTTA+CGG - chr2_1:692492-692511 None:intergenic 40.0%
AGATTTCGATGTATGCCTCA+TGG + chr2_1:692579-692598 Msa0186060:intron 40.0%
TTGCTGAAACCTTGTTCTAG+GGG - chr2_1:692616-692635 None:intergenic 40.0%
CTTGCTGAAACCTTGTTCTA+GGG - chr2_1:692617-692636 None:intergenic 40.0%
TCTTGCTGAAACCTTGTTCT+AGG - chr2_1:692618-692637 None:intergenic 40.0%
TCACAACAGATTCAGACTCA+TGG - chr2_1:692734-692753 None:intergenic 40.0%
TGAGAACTTTCATGTCACTC+GGG + chr2_1:692754-692773 Msa0186060:intron 40.0%
GACATGAAAGTTCTCATCAC+TGG - chr2_1:692750-692769 None:intergenic 40.0%
TGAGAACTTTCATGTCACTC+GGG + chr2_1:692754-692773 Msa0186060:intron 40.0%
ATAGCTGTTGGGAAATTGAG+AGG + chr2_1:693040-693059 Msa0186060:CDS 40.0%
TAGCTGTTGGGAAATTGAGA+GGG + chr2_1:693041-693060 Msa0186060:CDS 40.0%
AAATTGAGAGGGACTTCACA+AGG + chr2_1:693052-693071 Msa0186060:CDS 40.0%
TAAACACCCAGAAAAACCTG+AGG - chr2_1:693103-693122 None:intergenic 40.0%
ACCAAATGGTTTCTTGAACC+AGG + chr2_1:693207-693226 Msa0186060:intron 40.0%
AATAGCACACAATTCAGAGC+AGG - chr2_1:693338-693357 None:intergenic 40.0%
! TGCTCTGAATTGTGTGCTAT+TGG + chr2_1:693337-693356 Msa0186060:intron 40.0%
TATTACAGGCATGCTTGACT+TGG + chr2_1:693410-693429 Msa0186060:intron 40.0%
GCGTACAATACATCAATTGG+TGG - chr2_1:693529-693548 None:intergenic 40.0%
GCTGCGTACAATACATCAAT+TGG - chr2_1:693532-693551 None:intergenic 40.0%
CTTGTGTCAAAAACAGGGTA+AGG - chr2_1:693554-693573 None:intergenic 40.0%
!!! TACCCTGTTTTTGACACAAG+AGG + chr2_1:693554-693573 Msa0186060:intron 40.0%
AGCCTCTTGTGTCAAAAACA+GGG - chr2_1:693559-693578 None:intergenic 40.0%
!!! CAGGAACAAAGTTAGCCTTT+TGG - chr2_1:693792-693811 None:intergenic 40.0%
CAGAGAATCGGAAGAACTTA+CGG - chr2_1:693908-693927 None:intergenic 40.0%
AAGTTCTTCCGATTCTCTGT+TGG + chr2_1:693909-693928 Msa0186060:CDS 40.0%
CTAATCCTCCAACAGAGAAT+CGG - chr2_1:693920-693939 None:intergenic 40.0%
GTATCAATTCAGCCTAGTGA+AGG - chr2_1:693979-693998 None:intergenic 40.0%
ACACCACCACACTATATAAC+TGG - chr2_1:694001-694020 None:intergenic 40.0%
! ACATATATAGGTGCTATGCC+AGG + chr2_1:694061-694080 Msa0186060:CDS 40.0%
GGTACAATGCCTTAAGAATG+TGG + chr2_1:694090-694109 Msa0186060:CDS 40.0%
GAAAATTAGCATTCTGCTCG+GGG - chr2_1:694411-694430 None:intergenic 40.0%
! CGAGCAGAATGCTAATTTTC+TGG + chr2_1:694411-694430 Msa0186060:CDS 40.0%
TGTTTGCACTGCAAATGTAG+TGG + chr2_1:694629-694648 Msa0186060:CDS 40.0%
GATGATACCAAATCCCCTAT+TGG + chr2_1:694653-694672 Msa0186060:CDS 40.0%
TACCAAATCCCCTATTGGAT+AGG + chr2_1:694658-694677 Msa0186060:CDS 40.0%
ATCCTATCCAATAGGGGATT+TGG - chr2_1:694663-694682 None:intergenic 40.0%
AAATCCCCTATTGGATAGGA+TGG + chr2_1:694662-694681 Msa0186060:CDS 40.0%
AACCTCCATCCTATCCAATA+GGG - chr2_1:694670-694689 None:intergenic 40.0%
ATGGAGGTTGTTACTATTGC+TGG + chr2_1:694681-694700 Msa0186060:CDS 40.0%
TGGAGGTTGTTACTATTGCT+GGG + chr2_1:694682-694701 Msa0186060:CDS 40.0%
GCACATTGCAAGAGATTATC+TGG + chr2_1:694725-694744 Msa0186060:CDS 40.0%
AAAACTACACGTGAAGCATG+TGG + chr2_1:694750-694769 Msa0186060:CDS 40.0%
TGAAGCATGTGGAATAAAGC+CGG + chr2_1:694761-694780 Msa0186060:CDS 40.0%
! TTTCTTTTCCACCCGTTTAC+AGG + chr2_1:694794-694813 Msa0186060:intron 40.0%
! TTCTTTTCCACCCGTTTACA+GGG + chr2_1:694795-694814 Msa0186060:intron 40.0%
AGGAAAAGGAACCCTGTAAA+CGG - chr2_1:694809-694828 None:intergenic 40.0%
!! AATTAACTTGCTACAGGTGG+AGG + chr2_1:694908-694927 Msa0186060:intron 40.0%
GAAAACTATTGCCGAGAATC+AGG + chr2_1:694960-694979 Msa0186060:CDS 40.0%
TTGCTACTCTCTATCAACAC+GGG - chr2_1:695342-695361 None:intergenic 40.0%
! GAGTTTTCATCGGTATGTTC+AGG - chr2_1:695366-695385 None:intergenic 40.0%
TGAGATGAACACAAATCCAC+CGG + chr2_1:695395-695414 Msa0186060:CDS 40.0%
GATGATTGAAGTCTTCATGC+AGG - chr2_1:695719-695738 None:intergenic 40.0%
TGAATCGAAGACTGTTGAGA+AGG + chr2_1:695893-695912 Msa0186060:CDS 40.0%
AACACCTATTGGCGTTGTTA+TGG + chr2_1:695989-696008 Msa0186060:CDS 40.0%
ACACCTATTGGCGTTGTTAT+GGG + chr2_1:695990-696009 Msa0186060:CDS 40.0%
AAATCTGTTGAACAAGGGGA+CGG + chr2_1:696059-696078 Msa0186060:CDS 40.0%
!! AAAGGAGCATTGCATATCAC+CGG + chr2_1:696083-696102 Msa0186060:CDS 40.0%
TTGCATATCACCGGTCAATT+AGG + chr2_1:696092-696111 Msa0186060:CDS 40.0%
TTTCTCCCGTAGTATATCTC+TGG - chr2_1:696159-696178 None:intergenic 40.0%
!!! TTGGCAAAGAAAGCGTTTTC+TGG - chr2_1:696185-696204 None:intergenic 40.0%
ATTGCTAGATCCTTCTTCAC+AGG - chr2_1:696311-696330 None:intergenic 40.0%
AAGAAGGATCTAGCAATGAC+TGG + chr2_1:696314-696333 Msa0186060:CDS 40.0%
AGAAGGATCTAGCAATGACT+GGG + chr2_1:696315-696334 Msa0186060:CDS 40.0%
TCGTCATCTTTAATGGTCAC+TGG + chr2_1:696435-696454 Msa0186060:intron 40.0%
! AACCTGCAATTTTCACAGCA+TGG - chr2_1:696662-696681 None:intergenic 40.0%
GCTGTGAAAATTGCAGGTTA+AGG + chr2_1:696663-696682 Msa0186060:intron 40.0%
AGTAAATCACTAATGCCGGT+AGG + chr2_1:696866-696885 Msa0186060:exon 40.0%
GTTTCATCTCAAGATCCTAC+CGG - chr2_1:696884-696903 None:intergenic 40.0%
! TTTTCTATTGAGCTGGGAAC+CGG + chr2_1:696908-696927 Msa0186060:three_prime_UTR 40.0%
! ACATATTTTGCCCTGAACAC+GGG - chr2_1:696997-697016 None:intergenic 40.0%
! TTTTACAACTGGGATACACC+AGG - chr2_1:697034-697053 None:intergenic 40.0%
ATTCAGTTCCGCGACAAGAA+AGG + chr2_1:685559-685578 Msa0186060:five_prime_UTR 45.0%
GGATAGACGAGGGTTTATGA+AGG + chr2_1:685628-685647 Msa0186060:five_prime_UTR 45.0%
! AACTCTAAGAAGCGGAGATG+CGG - chr2_1:685905-685924 None:intergenic 45.0%
!! ATTCTCTCAGCGGATTGAGT+CGG + chr2_1:685929-685948 Msa0186060:CDS 45.0%
GAGTCGGAGTCATCGTTATT+TGG + chr2_1:685945-685964 Msa0186060:CDS 45.0%
GGAGTCATCGTTATTTGGGA+GGG + chr2_1:685950-685969 Msa0186060:CDS 45.0%
TCAGCATCAACCACATGATC+GGG - chr2_1:686015-686034 None:intergenic 45.0%
! ATCTTCAGGTCTGGGATAAG+TGG - chr2_1:686091-686110 None:intergenic 45.0%
GTGAGGTAATCTTCAGGTCT+GGG - chr2_1:686099-686118 None:intergenic 45.0%
AGTGAGGTAATCTTCAGGTC+TGG - chr2_1:686100-686119 None:intergenic 45.0%
CCAACAGTGAGGTAATCTTC+AGG - chr2_1:686105-686124 None:intergenic 45.0%
CCTGAAGATTACCTCACTGT+TGG + chr2_1:686102-686121 Msa0186060:intron 45.0%
TTGCTTCGATGGGATCTTGT+TGG + chr2_1:686641-686660 Msa0186060:intron 45.0%
AGTTCGGAGAGAAAGACAGA+AGG - chr2_1:686808-686827 None:intergenic 45.0%
! CAACATAGACCTCTTTTCCC+AGG + chr2_1:687168-687187 Msa0186060:CDS 45.0%
CTTTGCTCATTACAGGCTTC+TGG + chr2_1:687255-687274 Msa0186060:intron 45.0%
! TGGCTCATCTTTAAGGAGGA+AGG - chr2_1:687554-687573 None:intergenic 45.0%
! AGTCTGGCTCATCTTTAAGG+AGG - chr2_1:687558-687577 None:intergenic 45.0%
! CAGAGTCTGGCTCATCTTTA+AGG - chr2_1:687561-687580 None:intergenic 45.0%
ACTACATTGGGATCAGAGTC+TGG - chr2_1:687574-687593 None:intergenic 45.0%
GAGTCCCAACTTCATGAAGA+CGG - chr2_1:687654-687673 None:intergenic 45.0%
CCCCATGGATACTTGAAATC+TGG - chr2_1:687793-687812 None:intergenic 45.0%
ACGTCTGCGCATAACAGATA+TGG + chr2_1:687838-687857 Msa0186060:CDS 45.0%
CTGCGCATAACAGATATGGT+AGG + chr2_1:687842-687861 Msa0186060:intron 45.0%
! TCCTTATTTGCAGGTTAGCG+AGG + chr2_1:688014-688033 Msa0186060:intron 45.0%
TCCTCGCTAACCTGCAAATA+AGG - chr2_1:688018-688037 None:intergenic 45.0%
CATAAAGGCCACATCTTTCG+AGG + chr2_1:688215-688234 Msa0186060:CDS 45.0%
GGGGCAGAAACTATTAAAGG+TGG - chr2_1:688448-688467 None:intergenic 45.0%
GCCTAGAGAATAAAGGGGTT+AGG + chr2_1:688828-688847 Msa0186060:intron 45.0%
TTCAACTAGTGTGAGGATGC+AGG + chr2_1:688892-688911 Msa0186060:intron 45.0%
GAGTTGAGGGAGGAACTAAA+TGG + chr2_1:689080-689099 Msa0186060:intron 45.0%
TTGCTTCTACTCAAGCGGTA+AGG - chr2_1:689129-689148 None:intergenic 45.0%
AAGGTGAAGTTCTACCTTGG+AGG + chr2_1:689179-689198 Msa0186060:intron 45.0%
TCTACCTTGGAGGTGAAAGT+TGG + chr2_1:689189-689208 Msa0186060:intron 45.0%
TGTTGTATGGTGCAGAGTGT+TGG + chr2_1:689412-689431 Msa0186060:intron 45.0%
! GTTGTATGGTGCAGAGTGTT+GGG + chr2_1:689413-689432 Msa0186060:intron 45.0%
CGCTTACTTGATTCTCGTGT+TGG - chr2_1:689449-689468 None:intergenic 45.0%
TCAAGTAAGCGTAGACGAGA+TGG + chr2_1:689458-689477 Msa0186060:intron 45.0%
CAAGTAAGCGTAGACGAGAT+GGG + chr2_1:689459-689478 Msa0186060:intron 45.0%
AAGTAAGCGTAGACGAGATG+GGG + chr2_1:689460-689479 Msa0186060:intron 45.0%
CACCATTAGAGAGAGAGAGT+TGG + chr2_1:689531-689550 Msa0186060:intron 45.0%
CCATTAGAGAGAGAGAGTTG+GGG + chr2_1:689533-689552 Msa0186060:intron 45.0%
CTTCGTACTACAGTGTCTAC+AGG - chr2_1:689624-689643 None:intergenic 45.0%
ACGAAGAGTAGATCAGATGG+AGG + chr2_1:689638-689657 Msa0186060:intron 45.0%
AAATGCCGACATTGCTAGGT+TGG + chr2_1:689928-689947 Msa0186060:intron 45.0%
CTGAGTTCAAACCTAGGTGA+AGG - chr2_1:689957-689976 None:intergenic 45.0%
CTTCACCTAGGTTTGAACTC+AGG + chr2_1:689955-689974 Msa0186060:intron 45.0%
!! ATGAAGTAAAGGCGCTTCGT+AGG + chr2_1:690310-690329 Msa0186060:intron 45.0%
TATGAGAAACAAGAGGCCAG+TGG - chr2_1:690336-690355 None:intergenic 45.0%
AGTTTGCGAACGCATAGATG+TGG + chr2_1:690357-690376 Msa0186060:intron 45.0%
CCACAAAGTCGATGTCTCTT+AGG - chr2_1:691083-691102 None:intergenic 45.0%
!! CCTAAGAGACATCGACTTTG+TGG + chr2_1:691080-691099 Msa0186060:intron 45.0%
GCAGCTTAAGGCCATAAAGA+AGG + chr2_1:691428-691447 Msa0186060:CDS 45.0%
TTAGGGGTTCTGCAAAGCAA+TGG - chr2_1:691709-691728 None:intergenic 45.0%
CTATTTGCAGGAATTGGGAC+TGG + chr2_1:691949-691968 Msa0186060:intron 45.0%
!! AGGTGCTACACCAGTCTTTT+GGG - chr2_1:692054-692073 None:intergenic 45.0%
!! TAGGTGCTACACCAGTCTTT+TGG - chr2_1:692055-692074 None:intergenic 45.0%
AACACCTTGCCTACGTGTAT+AGG - chr2_1:692074-692093 None:intergenic 45.0%
! GCAAGGTGTTTGTTTCTCGA+AGG + chr2_1:692084-692103 Msa0186060:intron 45.0%
! TTGTTTCTCGAAGGACTTCG+GGG + chr2_1:692093-692112 Msa0186060:intron 45.0%
CAGTGTTACCCGTAACTACT+TGG + chr2_1:692480-692499 Msa0186060:CDS 45.0%
TTACCCGTAACTACTTGGAC+TGG + chr2_1:692485-692504 Msa0186060:CDS 45.0%
CAACCAGTCCAAGTAGTTAC+GGG - chr2_1:692491-692510 None:intergenic 45.0%
ACAAACCTGTATTCACCCCA+AGG - chr2_1:692523-692542 None:intergenic 45.0%
! TGCTGAAACCTTGTTCTAGG+GGG - chr2_1:692615-692634 None:intergenic 45.0%
GCCTGGTTCAAGAAACCATT+TGG - chr2_1:693211-693230 None:intergenic 45.0%
CTTAATGAGAGCAACTAGCC+TGG - chr2_1:693228-693247 None:intergenic 45.0%
CAGCCTCTTGTGTCAAAAAC+AGG - chr2_1:693560-693579 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG - chr2_1:693605-693624 None:intergenic 45.0%
!! AAGCCTTTGGTGCTTGCTTA+CGG + chr2_1:693760-693779 Msa0186060:intron 45.0%
TGCTTACGGTCTTTGCCAAA+AGG + chr2_1:693774-693793 Msa0186060:intron 45.0%
! GTATTGGCCGTTCAATTGCA+CGG + chr2_1:693874-693893 Msa0186060:CDS 45.0%
TATTGGCCGTTCAATTGCAC+GGG + chr2_1:693875-693894 Msa0186060:CDS 45.0%
TCGGAAGAACTTACGGTTCA+AGG - chr2_1:693901-693920 None:intergenic 45.0%
TTCTTCCGATTCTCTGTTGG+AGG + chr2_1:693912-693931 Msa0186060:CDS 45.0%
!! TGTTGGAGGATTAGCTGATG+TGG + chr2_1:693926-693945 Msa0186060:CDS 45.0%
AGCTGATGTGGCTGAAATCA+AGG + chr2_1:693938-693957 Msa0186060:CDS 45.0%
! GGGCATCGTCGAACATATAT+AGG + chr2_1:694049-694068 Msa0186060:CDS 45.0%
! AGGCATTGTACCATCTTTCC+TGG - chr2_1:694082-694101 None:intergenic 45.0%
TGGCTGTTCCCACATTCTTA+AGG - chr2_1:694102-694121 None:intergenic 45.0%
CGATGGGAACATCAAGATAG+TGG - chr2_1:694438-694457 None:intergenic 45.0%
TGTTCCCATCGATCTATCGA+AGG + chr2_1:694447-694466 Msa0186060:CDS 45.0%
CCAACCTTCGATAGATCGAT+GGG - chr2_1:694454-694473 None:intergenic 45.0%
ACCAACCTTCGATAGATCGA+TGG - chr2_1:694455-694474 None:intergenic 45.0%
CTGGGTGGTTATGTAAGAGT+CGG + chr2_1:694485-694504 Msa0186060:intron 45.0%
TTCCAGTGCATCAGTTGTCA+TGG - chr2_1:694590-694609 None:intergenic 45.0%
ACCTCCATCCTATCCAATAG+GGG - chr2_1:694669-694688 None:intergenic 45.0%
CAACCTCCATCCTATCCAAT+AGG - chr2_1:694671-694690 None:intergenic 45.0%
GGAAAAGGAACCCTGTAAAC+GGG - chr2_1:694808-694827 None:intergenic 45.0%
GGTTTCTGACTCCTGATTCT+CGG - chr2_1:694974-694993 None:intergenic 45.0%
TGCTACTCTCTATCAACACG+GGG - chr2_1:695341-695360 None:intergenic 45.0%
ACACAGAGAGATTGATCTGC+CGG - chr2_1:695417-695436 None:intergenic 45.0%
CGGTGGACCACATAAAAGTA+AGG - chr2_1:695796-695815 None:intergenic 45.0%
AGTCCCATAACAACGCCAAT+AGG - chr2_1:695996-696015 None:intergenic 45.0%
CTTCTTCACAGGCTTCTTCA+AGG - chr2_1:696300-696319 None:intergenic 45.0%
CTTGAAGAAGCCTGTGAAGA+AGG + chr2_1:696298-696317 Msa0186060:CDS 45.0%
GAAGGATCTAGCAATGACTG+GGG + chr2_1:696316-696335 Msa0186060:CDS 45.0%
ACAGGGAAGATTCTTCCCAT+TGG + chr2_1:696350-696369 Msa0186060:CDS 45.0%
TTTCAACATACCCCGCCAAT+GGG - chr2_1:696368-696387 None:intergenic 45.0%
! TTTTCAACATACCCCGCCAA+TGG - chr2_1:696369-696388 None:intergenic 45.0%
TGCCATGCTGTGAAAATTGC+AGG + chr2_1:696657-696676 Msa0186060:intron 45.0%
TATTGCTGCAAGAAGGAGTG+AGG + chr2_1:696693-696712 Msa0186060:CDS 45.0%
ATTCATCTTGTCCCGTGTTC+AGG + chr2_1:696983-697002 Msa0186060:three_prime_UTR 45.0%
TTCATCTTGTCCCGTGTTCA+GGG + chr2_1:696984-697003 Msa0186060:three_prime_UTR 45.0%
!! ATAAAAAAAAAAAAATTTGA+AGG - chr2_1:686596-686615 None:intergenic 5.0%
!! TATATATATATATATTCAAA+TGG - chr2_1:690417-690436 None:intergenic 5.0%
!! TATTTATTCAAATTTATATT+TGG + chr2_1:697064-697083 Msa0186060:three_prime_UTR 5.0%
AAGAGTGGCGTGTTCGATTC+TGG - chr2_1:685673-685692 None:intergenic 50.0%
AAGCGGAGGAAGAAGAAGAG+TGG - chr2_1:685688-685707 None:intergenic 50.0%
!! CATTGATGGTGGAAGCGAAG+CGG - chr2_1:685705-685724 None:intergenic 50.0%
TTCGCTTCCACCATCAATGG+TGG + chr2_1:685706-685725 Msa0186060:five_prime_UTR 50.0%
GCGATAACCACCATTGATGG+TGG - chr2_1:685716-685735 None:intergenic 50.0%
GTGGCGATAACCACCATTGA+TGG - chr2_1:685719-685738 None:intergenic 50.0%
CGGAGTCATCGTTATTTGGG+AGG + chr2_1:685949-685968 Msa0186060:CDS 50.0%
TTCTGTTCGGAGTCGGAATC+CGG + chr2_1:685982-686001 Msa0186060:CDS 50.0%
TGCTGAAGCTAAAGCAGCTG+AGG + chr2_1:686029-686048 Msa0186060:CDS 50.0%
AGCTGAGGAAACTCCGTCAA+AGG + chr2_1:686044-686063 Msa0186060:CDS 50.0%
GCAGAAGAAGCAGCCTTTGA+CGG - chr2_1:686060-686079 None:intergenic 50.0%
CTAGTTTCGGGCTTCTGCAA+TGG + chr2_1:686509-686528 Msa0186060:intron 50.0%
CTTCGATGGGATCTTGTTGG+AGG + chr2_1:686644-686663 Msa0186060:intron 50.0%
! AGTTTAGGGCAGCAATAGGG+AGG - chr2_1:686977-686996 None:intergenic 50.0%
CATCCAGGACCCCAAACTAT+TGG + chr2_1:687483-687502 Msa0186060:intron 50.0%
TCAGGATCACTTGATCCCCA+TGG - chr2_1:687808-687827 None:intergenic 50.0%
GGGGATCAAGTGATCCTGAT+TGG + chr2_1:687809-687828 Msa0186060:CDS 50.0%
TTGGAACATGGGAATGGGGA+AGG + chr2_1:688343-688362 Msa0186060:intron 50.0%
TGGAACATGGGAATGGGGAA+GGG + chr2_1:688344-688363 Msa0186060:intron 50.0%
AGGGAGCTTCAACTAGTGTG+AGG + chr2_1:688885-688904 Msa0186060:intron 50.0%
AACTAGTGTGAGGATGCAGG+AGG + chr2_1:688895-688914 Msa0186060:intron 50.0%
ACTAGTGTGAGGATGCAGGA+GGG + chr2_1:688896-688915 Msa0186060:intron 50.0%
! CGGTGCTAACTGCTAACTCT+TGG - chr2_1:689021-689040 None:intergenic 50.0%
CATGCTTGAAGAGTTGAGGG+AGG + chr2_1:689070-689089 Msa0186060:intron 50.0%
TGAGGGAGGAACTAAATGGG+AGG + chr2_1:689084-689103 Msa0186060:intron 50.0%
ACGAGATGGGGATGTTGCAT+TGG + chr2_1:689472-689491 Msa0186060:intron 50.0%
GGGATGTTGCATTGGATGAG+TGG + chr2_1:689480-689499 Msa0186060:intron 50.0%
CCCCAACTCTCTCTCTCTAA+TGG - chr2_1:689536-689555 None:intergenic 50.0%
! GGTGGTTTGTGCATGTAGAG+AGG + chr2_1:689595-689614 Msa0186060:intron 50.0%
GGTGTCCAACCTAGCAATGT+CGG - chr2_1:689936-689955 None:intergenic 50.0%
! TAGGTTGGACACCTTCACCT+AGG + chr2_1:689943-689962 Msa0186060:intron 50.0%
GAGGTCCTGAGTTCAAACCT+AGG - chr2_1:689963-689982 None:intergenic 50.0%
! GCTCCAAAATCTGCTAGCCT+TGG - chr2_1:690983-691002 None:intergenic 50.0%
! TCCTGTGGTCGAGGAAGTTT+TGG + chr2_1:691792-691811 Msa0186060:intron 50.0%
ACCAAAACTTCCTCGACCAC+AGG - chr2_1:691796-691815 None:intergenic 50.0%
GACGACAAGACAGCACTTAC+AGG + chr2_1:691977-691996 Msa0186060:CDS 50.0%
TTGTTCCCTGCCCAAAAGAC+TGG + chr2_1:692041-692060 Msa0186060:intron 50.0%
! CTACACCAGTCTTTTGGGCA+GGG - chr2_1:692049-692068 None:intergenic 50.0%
GGTGTAGCACCTATACACGT+AGG + chr2_1:692062-692081 Msa0186060:intron 50.0%
AGCACCTATACACGTAGGCA+AGG + chr2_1:692067-692086 Msa0186060:intron 50.0%
! GGTGGGCATTTTTCTCGCTT+AGG - chr2_1:692391-692410 None:intergenic 50.0%
ACTCGCAAAGCTACAGCTGT+TGG + chr2_1:692438-692457 Msa0186060:CDS 50.0%
!! GCTGAAACCTTGTTCTAGGG+GGG - chr2_1:692614-692633 None:intergenic 50.0%
!! ACAGGCATGCTTGACTTGGT+CGG + chr2_1:693414-693433 Msa0186060:intron 50.0%
TTCAGTCATGATAGGCAGCC+CGG + chr2_1:693472-693491 Msa0186060:intron 50.0%
AAGGTCACGGGTTCAAGTAC+TGG - chr2_1:693586-693605 None:intergenic 50.0%
TCACGTGACTGAAAGGTCAC+GGG - chr2_1:693598-693617 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+CGG - chr2_1:693599-693618 None:intergenic 50.0%
ACAACTTTACCGTTGCGCCA+AGG + chr2_1:693620-693639 Msa0186060:intron 50.0%
!! GAATTTTAAAGGCGGGGCCT+TGG - chr2_1:693640-693659 None:intergenic 50.0%
AGACCGTAAGCAAGCACCAA+AGG - chr2_1:693766-693785 None:intergenic 50.0%
! ATCTGTCTTTCTGGTCCACC+AGG + chr2_1:693837-693856 Msa0186060:CDS 50.0%
!! ATACTCGTTTTTCCCACGCC+TGG - chr2_1:693858-693877 None:intergenic 50.0%
GGCGTGGGAAAAACGAGTAT+TGG + chr2_1:693858-693877 Msa0186060:CDS 50.0%
TCAAGGCCCGTGCAATTGAA+CGG - chr2_1:693884-693903 None:intergenic 50.0%
! AGGTGCTATGCCAGGAAAGA+TGG + chr2_1:694069-694088 Msa0186060:CDS 50.0%
! CCAGGAGAGCGTATACCAAA+GGG - chr2_1:694216-694235 None:intergenic 50.0%
! ACCAGGAGAGCGTATACCAA+AGG - chr2_1:694217-694236 None:intergenic 50.0%
TAGTTGGGCAAAGGACATGC+CGG + chr2_1:694352-694371 Msa0186060:intron 50.0%
! CAAAGCACTTGCTGGATCAC+CGG - chr2_1:694374-694393 None:intergenic 50.0%
! AGCTCTAGCAAAGCACTTGC+TGG - chr2_1:694382-694401 None:intergenic 50.0%
CCCATCGATCTATCGAAGGT+TGG + chr2_1:694451-694470 Msa0186060:intron 50.0%
GACCATGACAACTGATGCAC+TGG + chr2_1:694585-694604 Msa0186060:intron 50.0%
ATGCACTGGAATCATGCTGC+AGG + chr2_1:694599-694618 Msa0186060:intron 50.0%
TCCCCTATTGGATAGGATGG+AGG + chr2_1:694665-694684 Msa0186060:CDS 50.0%
AAAGGAACCCTGTAAACGGG+TGG - chr2_1:694805-694824 None:intergenic 50.0%
AGATAGCGCTACGACTTGTG+AGG + chr2_1:695226-695245 Msa0186060:intron 50.0%
! CACGGGGTTCCCTTTTTGAA+TGG - chr2_1:695325-695344 None:intergenic 50.0%
GATCAAAGATGCGCTCTGCA+TGG - chr2_1:695968-695987 None:intergenic 50.0%
GTTGAACAAGGGGACGGAAA+AGG + chr2_1:696065-696084 Msa0186060:CDS 50.0%
TTTCACCTCCATGTTCCTGC+AGG + chr2_1:696212-696231 Msa0186060:CDS 50.0%
TTCACCTCCATGTTCCTGCA+GGG + chr2_1:696213-696232 Msa0186060:CDS 50.0%
GGCAAGGGACAACATAGAAG+TGG - chr2_1:696279-696298 None:intergenic 50.0%
CACAGGCTTCTTCAAGGCAA+GGG - chr2_1:696294-696313 None:intergenic 50.0%
TCACAGGCTTCTTCAAGGCA+AGG - chr2_1:696295-696314 None:intergenic 50.0%
ACTGGGGAAGTGACACTTAC+AGG + chr2_1:696332-696351 Msa0186060:CDS 50.0%
CTGGGGAAGTGACACTTACA+GGG + chr2_1:696333-696352 Msa0186060:CDS 50.0%
GGGAAGATTCTTCCCATTGG+CGG + chr2_1:696353-696372 Msa0186060:CDS 50.0%
GGAAGATTCTTCCCATTGGC+GGG + chr2_1:696354-696373 Msa0186060:CDS 50.0%
GAAGATTCTTCCCATTGGCG+GGG + chr2_1:696355-696374 Msa0186060:CDS 50.0%
!! GGTCACTGGTTTCCAAGTTC+TGG + chr2_1:696449-696468 Msa0186060:intron 50.0%
CGCTTCGCTTCCACCATCAA+TGG + chr2_1:685703-685722 Msa0186060:five_prime_UTR 55.0%
GGTTAAGCGGTGGATGCAAG+AGG - chr2_1:685845-685864 None:intergenic 55.0%
AAGAAGCGGAGATGCGGAGT+CGG - chr2_1:685899-685918 None:intergenic 55.0%
! AGTTTGGGGTCCTGGATGCA+TGG - chr2_1:687481-687500 None:intergenic 55.0%
! CTGCCAATAGTTTGGGGTCC+TGG - chr2_1:687489-687508 None:intergenic 55.0%
GATCGACAAGCCCCTTATGC+TGG + chr2_1:687526-687545 Msa0186060:CDS 55.0%
!! GAGGAAGGCACCAGCATAAG+GGG - chr2_1:687539-687558 None:intergenic 55.0%
!! GGAGGAAGGCACCAGCATAA+GGG - chr2_1:687540-687559 None:intergenic 55.0%
!! AGGAGGAAGGCACCAGCATA+AGG - chr2_1:687541-687560 None:intergenic 55.0%
GCAGACGTCGATGACCAATC+AGG - chr2_1:687826-687845 None:intergenic 55.0%
GGAACATGGGAATGGGGAAG+GGG + chr2_1:688345-688364 Msa0186060:intron 55.0%
CTAGTGTGAGGATGCAGGAG+GGG + chr2_1:688897-688916 Msa0186060:intron 55.0%
TAGTGTGAGGATGCAGGAGG+GGG + chr2_1:688898-688917 Msa0186060:intron 55.0%
AAGGGCTTAGGGTTGACCCT+TGG - chr2_1:688958-688977 None:intergenic 55.0%
!! GTATGGTGCAGAGTGTTGGG+AGG + chr2_1:689416-689435 Msa0186060:intron 55.0%
! GCTACACCAGTCTTTTGGGC+AGG - chr2_1:692050-692069 None:intergenic 55.0%
CGCAAAGCTACAGCTGTTGG+AGG + chr2_1:692441-692460 Msa0186060:CDS 55.0%
ACTGGTTGACTGCACTGCCT+TGG + chr2_1:692503-692522 Msa0186060:CDS 55.0%
CTGGTTGACTGCACTGCCTT+GGG + chr2_1:692504-692523 Msa0186060:CDS 55.0%
TGGTTGACTGCACTGCCTTG+GGG + chr2_1:692505-692524 Msa0186060:CDS 55.0%
CACTGCCTTGGGGTGAATAC+AGG + chr2_1:692515-692534 Msa0186060:CDS 55.0%
!! CAGGCATGCTTGACTTGGTC+GGG + chr2_1:693415-693434 Msa0186060:intron 55.0%
CAATTGGTGGGATCCCTTCC+CGG - chr2_1:693516-693535 None:intergenic 55.0%
CCCTTTGGTATACGCTCTCC+TGG + chr2_1:694213-694232 Msa0186060:intron 55.0%
TAGCATTCTGCTCGGGGTCT+AGG - chr2_1:694405-694424 None:intergenic 55.0%
CAGAGAGATTGATCTGCCGG+TGG - chr2_1:695414-695433 None:intergenic 55.0%
ATGCGCTCTGCATGGAAGAC+AGG - chr2_1:695960-695979 None:intergenic 55.0%
GCGTTGTTATGGGACTTGCC+TGG + chr2_1:696000-696019 Msa0186060:CDS 55.0%
GGACTTGCCTGGACTGCAAT+GGG + chr2_1:696011-696030 Msa0186060:CDS 55.0%
TCACCTCCATGTTCCTGCAG+GGG + chr2_1:696214-696233 Msa0186060:CDS 55.0%
CCAGCACTTGGTCCATCCTT+TGG - chr2_1:696245-696264 None:intergenic 55.0%
CCAAAGGATGGACCAAGTGC+TGG + chr2_1:696242-696261 Msa0186060:CDS 55.0%
GTCATCGTGCAACCAGCACT+TGG - chr2_1:696257-696276 None:intergenic 55.0%
!! TGATGGTGGAAGCGAAGCGG+AGG - chr2_1:685702-685721 None:intergenic 60.0%
!! AAAGGCGCTTCGTAGGCCAC+TGG + chr2_1:690317-690336 Msa0186060:intron 60.0%
AACGCAGCCCCCCTAGAACA+AGG + chr2_1:692604-692623 Msa0186060:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr2_1:693500-693519 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr2_1:693501-693520 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr2_1:693500-693519 Msa0186060:intron 60.0%
! TCTTTCTGGTCCACCAGGCG+TGG + chr2_1:693842-693861 Msa0186060:CDS 60.0%
! CTTTCTGGTCCACCAGGCGT+GGG + chr2_1:693843-693862 Msa0186060:CDS 60.0%
!! CTCGTTTTTCCCACGCCTGG+TGG - chr2_1:693855-693874 None:intergenic 60.0%
GCTACGACTTGTGAGGCACG+TGG + chr2_1:695233-695252 Msa0186060:CDS 60.0%
GGGACTTGCCTGGACTGCAA+TGG + chr2_1:696010-696029 Msa0186060:CDS 60.0%
CTTGCCTGGACTGCAATGGG+CGG + chr2_1:696014-696033 Msa0186060:CDS 60.0%
TAGCCCCTGCAGGAACATGG+AGG - chr2_1:696220-696239 None:intergenic 60.0%
GTGTAGCCCCTGCAGGAACA+TGG - chr2_1:696223-696242 None:intergenic 60.0%
TCCTGCAGGGGCTACACCAA+AGG + chr2_1:696226-696245 Msa0186060:CDS 60.0%
! TCCTTTGGTGTAGCCCCTGC+AGG - chr2_1:696230-696249 None:intergenic 60.0%
GCAGGGGCTACACCAAAGGA+TGG + chr2_1:696230-696249 Msa0186060:CDS 60.0%
TCGGATGCCGGTCGGAGAAC+CGG - chr2_1:685880-685899 None:intergenic 65.0%
ATGCGGAGTCGGATGCCGGT+CGG - chr2_1:685888-685907 None:intergenic 65.0%
GGAGATGCGGAGTCGGATGC+CGG - chr2_1:685892-685911 None:intergenic 65.0%
TCGGAGTCGGAATCCGGCGA+CGG + chr2_1:685988-686007 Msa0186060:CDS 65.0%
CACATGATCGGGTCCGTCGC+CGG - chr2_1:686004-686023 None:intergenic 65.0%
ACCCTGCATATGCGGGCACC+GGG - chr2_1:693493-693512 None:intergenic 65.0%
GACCCTGCATATGCGGGCAC+CGG - chr2_1:693494-693513 None:intergenic 65.0%
GTGCCCGCATATGCAGGGTC+CGG + chr2_1:693494-693513 Msa0186060:intron 65.0%
TGCCCGCATATGCAGGGTCC+GGG + chr2_1:693495-693514 Msa0186060:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr2_1:693499-693518 Msa0186060:intron 65.0%
GGATCCGCCCATTGCAGTCC+AGG - chr2_1:696021-696040 None:intergenic 65.0%
GAACCGCGGCGGGGGTTAAG+CGG - chr2_1:685858-685877 None:intergenic 70.0%
CTTAACCCCCGCCGCGGTTC+CGG + chr2_1:685858-685877 Msa0186060:CDS 70.0%
TCGGAGAACCGGAACCGCGG+CGG - chr2_1:685869-685888 None:intergenic 70.0%
CGGTCGGAGAACCGGAACCG+CGG - chr2_1:685872-685891 None:intergenic 70.0%
CGCGGTTCCGGTTCTCCGAC+CGG + chr2_1:685870-685889 Msa0186060:CDS 70.0%
CGGCGACGGACCCGATCATG+TGG + chr2_1:686002-686021 Msa0186060:CDS 70.0%
GGGGGGCTGCGTTCTCCATG+AGG - chr2_1:692597-692616 None:intergenic 70.0%
AGCCCGGTGCCCGCATATGC+AGG + chr2_1:693488-693507 Msa0186060:intron 70.0%
GCCCGGTGCCCGCATATGCA+GGG + chr2_1:693489-693508 Msa0186060:intron 70.0%
AAGGCGGGGCCTTGGCGCAA+CGG - chr2_1:693632-693651 None:intergenic 70.0%
CCACCGCTTAACCCCCGCCG+CGG + chr2_1:685852-685871 Msa0186060:CDS 75.0%
GAGAACCGGAACCGCGGCGG+GGG - chr2_1:685866-685885 None:intergenic 75.0%
GGAGAACCGGAACCGCGGCG+GGG - chr2_1:685867-685886 None:intergenic 75.0%
CGGAGAACCGGAACCGCGGC+GGG - chr2_1:685868-685887 None:intergenic 75.0%
! CCGCGGCGGGGGTTAAGCGG+TGG - chr2_1:685855-685874 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 685546 697228 685546 ID=Msa0186060;Name=Msa0186060
chr2_1 mRNA 685546 697228 685546 ID=Msa0186060-mRNA-1;Parent=Msa0186060;Name=Msa0186060-mRNA-1;_AED=0.19;_eAED=0.19;_QI=277|0.94|0.95|1|1|1|20|358|973
chr2_1 exon 685546 686119 685546 ID=Msa0186060-mRNA-1:exon:158;Parent=Msa0186060-mRNA-1
chr2_1 exon 687150 687215 687150 ID=Msa0186060-mRNA-1:exon:159;Parent=Msa0186060-mRNA-1
chr2_1 exon 687490 687681 687490 ID=Msa0186060-mRNA-1:exon:160;Parent=Msa0186060-mRNA-1
chr2_1 exon 687794 687859 687794 ID=Msa0186060-mRNA-1:exon:161;Parent=Msa0186060-mRNA-1
chr2_1 exon 688027 688053 688027 ID=Msa0186060-mRNA-1:exon:162;Parent=Msa0186060-mRNA-1
chr2_1 exon 688186 688308 688186 ID=Msa0186060-mRNA-1:exon:163;Parent=Msa0186060-mRNA-1
chr2_1 exon 690959 691057 690959 ID=Msa0186060-mRNA-1:exon:164;Parent=Msa0186060-mRNA-1
chr2_1 exon 691213 691278 691213 ID=Msa0186060-mRNA-1:exon:165;Parent=Msa0186060-mRNA-1
chr2_1 exon 691363 691449 691363 ID=Msa0186060-mRNA-1:exon:166;Parent=Msa0186060-mRNA-1
chr2_1 exon 691959 691998 691959 ID=Msa0186060-mRNA-1:exon:167;Parent=Msa0186060-mRNA-1
chr2_1 exon 692365 692536 692365 ID=Msa0186060-mRNA-1:exon:168;Parent=Msa0186060-mRNA-1
chr2_1 exon 692949 693073 692949 ID=Msa0186060-mRNA-1:exon:169;Parent=Msa0186060-mRNA-1
chr2_1 exon 693829 693959 693829 ID=Msa0186060-mRNA-1:exon:170;Parent=Msa0186060-mRNA-1
chr2_1 exon 694049 694153 694049 ID=Msa0186060-mRNA-1:exon:171;Parent=Msa0186060-mRNA-1
chr2_1 exon 694355 694468 694355 ID=Msa0186060-mRNA-1:exon:172;Parent=Msa0186060-mRNA-1
chr2_1 exon 694621 694788 694621 ID=Msa0186060-mRNA-1:exon:173;Parent=Msa0186060-mRNA-1
chr2_1 exon 694924 695025 694924 ID=Msa0186060-mRNA-1:exon:174;Parent=Msa0186060-mRNA-1
chr2_1 exon 695228 695461 695228 ID=Msa0186060-mRNA-1:exon:175;Parent=Msa0186060-mRNA-1
chr2_1 exon 695861 696376 695861 ID=Msa0186060-mRNA-1:exon:176;Parent=Msa0186060-mRNA-1
chr2_1 exon 696679 697228 696679 ID=Msa0186060-mRNA-1:exon:177;Parent=Msa0186060-mRNA-1
chr2_1 five_prime_UTR 685546 685822 685546 ID=Msa0186060-mRNA-1:five_prime_utr;Parent=Msa0186060-mRNA-1
chr2_1 CDS 685823 686119 685823 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 687150 687215 687150 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 687490 687681 687490 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 687794 687859 687794 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 688027 688053 688027 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 688186 688308 688186 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 690959 691057 690959 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 691213 691278 691213 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 691363 691449 691363 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 691959 691998 691959 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 692365 692536 692365 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 692949 693073 692949 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 693829 693959 693829 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 694049 694153 694049 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 694355 694468 694355 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 694621 694788 694621 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 694924 695025 694924 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 695228 695461 695228 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 695861 696376 695861 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 CDS 696679 696870 696679 ID=Msa0186060-mRNA-1:cds;Parent=Msa0186060-mRNA-1
chr2_1 three_prime_UTR 696871 697228 696871 ID=Msa0186060-mRNA-1:three_prime_utr;Parent=Msa0186060-mRNA-1
Gene Sequence

>Msa0186060

ATGTTGAAGCTCATTTCATCCTCTTGCATCCACCGCTTAACCCCCGCCGCGGTTCCGGTTCTCCGACCGGCATCCGACTCCGCATCTCCGCTTCTTAGAGTTTTGAATTCTCTCAGCGGATTGAGTCGGAGTCATCGTTATTTGGGAGGGAGAGTATTTTTCTGTTCGGAGTCGGAATCCGGCGACGGACCCGATCATGTGGTTGATGCTGAAGCTAAAGCAGCTGAGGAAACTCCGTCAAAGGCTGCTTCTTCTGCTATTGTCTCCACTTATCCCAGACCTGAAGATTACCTCACTGTTTTGGCTTTGCCGTTGCAACATAGACCTCTTTTCCCAGGATTTTACATGCCAATTTTTGTTAAGGACCCCAAACTATTGGCAGCTTTACAGGAAAGTCGAGATCGACAAGCCCCTTATGCTGGTGCCTTCCTCCTTAAAGATGAGCCAGACTCTGATCCCAATGTAGTATCTAGCTCTGACACAGAAAAGAGTGTATATGATTTAAAAGGAAAAGAGTTGTTTAACCGTCTTCATGAAGTTGGGACTCTTGCCCAAATTTCAAGTATCCATGGGGATCAAGTGATCCTGATTGGTCATCGACGTCTGCGCATAACAGATATGGTTAGCGAGGACCCGCTTACTGTAAAAGATAAAGCTTATAACAAAGATGATGACATCATAAAGGCCACATCTTTCGAGGTCATATCAACACTAAGGGACGTTCTTAAAACAAGTTCTCTTTGGAGAGATCATGTTGCGACTTACTCTAAGCATATAGGTGATTTTACATATCCAAGGCTAGCAGATTTTGGAGCTGCAATATCTGGGGCTAACAAATTGCAATGCCAACAAGTTCTTGAAGAGCTAGATGTGTATAAACGATTGAAACTTACACTCGAGTTGGTAAAGAAAGAGATGGAAATCAGTAAGATTCAGGAAACAATTGCGAAAGCAATTGAAGAAAAGATAAGTGGTGAGCAGCGCCGTTATTTGTTAAATGAGCAGCTTAAGGCCATAAAGAAGGAATTGGGACTGGAGACTGACGACAAGACAGCACTTACAGGTAAATTCAGGGAAAGGATTGAACCTAAGCGAGAAAAATGCCCACCTCATGTGTTACAAGTTATAGACGAGGAACTCGCAAAGCTACAGCTGTTGGAGGCTAGTTCTAGTGAATTCAGTGTTACCCGTAACTACTTGGACTGGTTGACTGCACTGCCTTGGGGTGAATACAGTGATGAGAACTTTCATGTCACTCGGGCACAAAAGATTCTTGATGAAGACCATTACGGATTAACTGATGTGAAGGAAAGAATATTGGAATTCATAGCTGTTGGGAAATTGAGAGGGACTTCACAAGGAAAAATTATCTGTCTTTCTGGTCCACCAGGCGTGGGAAAAACGAGTATTGGCCGTTCAATTGCACGGGCCTTGAACCGTAAGTTCTTCCGATTCTCTGTTGGAGGATTAGCTGATGTGGCTGAAATCAAGGGGCATCGTCGAACATATATAGGTGCTATGCCAGGAAAGATGGTACAATGCCTTAAGAATGTGGGAACAGCCAATCCTCTTGTATTGATTGATGAAATTGACAAATTGGGCAAAGGACATGCCGGTGATCCAGCAAGTGCTTTGCTAGAGCTCCTAGACCCCGAGCAGAATGCTAATTTTCTGGACCACTATCTTGATGTTCCCATCGATCTATCGAAGGTTCTTTTTGTTTGCACTGCAAATGTAGTGGAGATGATACCAAATCCCCTATTGGATAGGATGGAGGTTGTTACTATTGCTGGGTATATTGCTGATGAGAAAATGCACATTGCAAGAGATTATCTGGAGAAAACTACACGTGAAGCATGTGGAATAAAGCCGGAACAAGTGGAGGTGACTGATGCTGCTCTTCTTGCTCTAATAGAAAACTATTGCCGAGAATCAGGAGTCAGAAACCTTCAAAAGCACATAGAAAAAATTTACCGGAAGATAGCGCTACGACTTGTGAGGCACGTGGAAACAAATGATGATGCTATTGAACCAAAGAAAGCTGAAGAAGATTTTGATGAAACGGGTACTACTACCATTCAAAAAGGGAACCCCGTGTTGATAGAGAGTAGCAATCCTGAACATACCGATGAAAACTCTAAACTTGATGAGATGAACACAAATCCACCGGCAGATCAATCTCTCTGTGTTGACGATAAATCTACAGATATTGAGGTTACAAAAGAAAGAGAGGAAGATAAGGAAACTGAATCGAAGACTGTTGAGAAGGTATTAATTGATAAATCGAATTTAGATGATTTTGTTGGCAAGCCTGTCTTCCATGCAGAGCGCATCTTTGATCAAACACCTATTGGCGTTGTTATGGGACTTGCCTGGACTGCAATGGGCGGATCCACACTGTATATAGAGACTAAATCTGTTGAACAAGGGGACGGAAAAGGAGCATTGCATATCACCGGTCAATTAGGAGATGTAATGAAAGAAAGTGCTCAACTAGCTCACACAATTGCCAGAGATATACTACGGGAGAAAGAACCAGAAAACGCTTTCTTTGCCAATACAAAGTTTCACCTCCATGTTCCTGCAGGGGCTACACCAAAGGATGGACCAAGTGCTGGTTGCACGATGACCACTTCTATGTTGTCCCTTGCCTTGAAGAAGCCTGTGAAGAAGGATCTAGCAATGACTGGGGAAGTGACACTTACAGGGAAGATTCTTCCCATTGGCGGGGTTAAGGAGAAAACTATTGCTGCAAGAAGGAGTGAGGTTAAGACTATAATATTTCCTTCGGCAAATAAGAGAGATTTTGATGAGCTAGCACCTAATGTAAAAGAAGGTCTCGAAGTGCACTTTGTTGATGACTATATGCAGATCTTTGATTTGGCTTTTGGTGATGAGAAATCTCACAATGCAGAGAAGTAA
Protein sequence

>Msa0186060

MLKLISSSCIHRLTPAAVPVLRPASDSASPLLRVLNSLSGLSRSHRYLGGRVFFCSESESGDGPDHVVDAEAKAAEETPSKAASSAIVSTYPRPEDYLTVLALPLQHRPLFPGFYMPIFVKDPKLLAALQESRDRQAPYAGAFLLKDEPDSDPNVVSSSDTEKSVYDLKGKELFNRLHEVGTLAQISSIHGDQVILIGHRRLRITDMVSEDPLTVKDKAYNKDDDIIKATSFEVISTLRDVLKTSSLWRDHVATYSKHIGDFTYPRLADFGAAISGANKLQCQQVLEELDVYKRLKLTLELVKKEMEISKIQETIAKAIEEKISGEQRRYLLNEQLKAIKKELGLETDDKTALTGKFRERIEPKREKCPPHVLQVIDEELAKLQLLEASSSEFSVTRNYLDWLTALPWGEYSDENFHVTRAQKILDEDHYGLTDVKERILEFIAVGKLRGTSQGKIICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLADVAEIKGHRRTYIGAMPGKMVQCLKNVGTANPLVLIDEIDKLGKGHAGDPASALLELLDPEQNANFLDHYLDVPIDLSKVLFVCTANVVEMIPNPLLDRMEVVTIAGYIADEKMHIARDYLEKTTREACGIKPEQVEVTDAALLALIENYCRESGVRNLQKHIEKIYRKIALRLVRHVETNDDAIEPKKAEEDFDETGTTTIQKGNPVLIESSNPEHTDENSKLDEMNTNPPADQSLCVDDKSTDIEVTKEREEDKETESKTVEKVLIDKSNLDDFVGKPVFHAERIFDQTPIGVVMGLAWTAMGGSTLYIETKSVEQGDGKGALHITGQLGDVMKESAQLAHTIARDILREKEPENAFFANTKFHLHVPAGATPKDGPSAGCTMTTSMLSLALKKPVKKDLAMTGEVTLTGKILPIGGVKEKTIAARRSEVKTIIFPSANKRDFDELAPNVKEGLEVHFVDDYMQIFDLAFGDEKSHNAEK*