AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0270290


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0270290 MtrunA17_Chr2g0277431 90.787 445 24 2 17 448 49 489 0.0 807
Msa0270290 MtrunA17_Chr2g0277451 75.000 128 29 1 1 128 1 125 3.79e-57 185
Msa0270290 MtrunA17_Chr2g0280611 53.968 126 57 1 83 208 78 202 2.78e-39 141
Msa0270290 MtrunA17_Chr4g0067641 54.464 112 50 1 83 194 80 190 1.28e-37 138
Msa0270290 MtrunA17_Chr1g0166671 45.223 157 69 4 55 198 35 187 3.13e-31 119
Msa0270290 MtrunA17_Chr1g0187251 49.558 113 56 1 86 198 94 205 2.76e-29 114
Msa0270290 MtrunA17_Chr2g0316311 45.133 113 60 2 83 195 86 196 3.10e-23 100
Msa0270290 MtrunA17_Chr1g0148081 32.653 343 171 15 6 322 5 313 3.44e-23 99.8
Msa0270290 MtrunA17_Chr6g0467031 37.037 108 58 3 89 191 72 174 2.05e-12 65.9
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0270290 AT4G20020.2 44.361 266 114 8 15 257 1 255 5.81e-61 204
Msa0270290 AT4G20020.1 44.361 266 114 8 15 257 1 255 1.62e-60 203
Msa0270290 AT5G44780.1 54.545 143 61 2 59 197 45 187 6.24e-42 158
Msa0270290 AT1G11430.1 60.909 110 42 1 83 192 78 186 3.11e-40 144
Msa0270290 AT3G06790.2 57.143 112 46 2 83 194 85 194 1.85e-36 134
Msa0270290 AT3G06790.1 57.143 112 46 2 83 194 85 194 2.74e-36 134
Msa0270290 AT2G35240.1 45.833 144 64 3 86 227 90 221 2.12e-31 120
Msa0270290 AT1G32580.1 43.791 153 72 3 86 236 87 227 8.45e-31 119
Msa0270290 AT3G15000.1 36.410 195 112 5 2 195 15 198 3.77e-25 107
Msa0270290 AT1G72530.1 38.318 107 64 2 86 192 48 152 2.05e-17 80.5
Msa0270290 AT1G72530.2 36.937 111 64 3 86 192 48 156 2.99e-15 74.3
Msa0270290 AT1G53260.2 46.774 62 33 0 134 195 2 63 1.06e-11 65.1
Msa0270290 AT1G53260.1 47.458 59 31 0 134 192 2 60 1.25e-11 65.5

Find 176 sgRNAs with CRISPR-Local

Find 227 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CAGCATGATTATTCCCCTTC+TGG 0.152275 2_3:-1565479 None:intergenic
ACAAATACCTTCAAATTTCT+TGG 0.193516 2_3:-1564144 None:intergenic
GCTGAATCAAACCGGATATT+TGG 0.205342 2_3:-1565024 None:intergenic
TATGCGCCGCAGCAAAATTT+TGG 0.234811 2_3:+1565315 Msa0270290:CDS
TTGAATTGTGTAAATTATAA+AGG 0.249285 2_3:-1566023 None:intergenic
GATGAAATAGAACCGGTAAT+TGG 0.256818 2_3:-1563676 None:intergenic
AGGTGGAGGTTTGTTATCTC+TGG 0.258166 2_3:-1563887 None:intergenic
GTGCTAAGGGTTTCAATATC+AGG 0.262167 2_3:+1563941 Msa0270290:CDS
CGACCTCCACCAGTACAATT+TGG 0.262627 2_3:+1564805 Msa0270290:CDS
TCGCTTTCGGTCCCAATTAC+CGG 0.272059 2_3:+1563664 Msa0270290:CDS
CGGAGTTATCTTTGTGTTGC+CGG 0.290339 2_3:+1564543 Msa0270290:CDS
GGTTGGAGAGAGTAGGGTTT+TGG 0.304529 2_3:-1563554 None:intergenic
AATCAACTTAGAATGCAATT+TGG 0.312821 2_3:-1565793 None:intergenic
TGAACGCCGTCGACGACGTT+TGG 0.320333 2_3:-1563721 None:intergenic
ATAACAAATAAGTTAGAGAT+AGG 0.328503 2_3:-1566000 None:intergenic
GGATTTCAAACCATCATATA+TGG 0.330866 2_3:+1565440 Msa0270290:CDS
GAACGCCGTCGACGACGTTT+GGG 0.334529 2_3:-1563720 None:intergenic
AGCTACTGCGACTTCGCTTT+CGG 0.360324 2_3:+1563651 Msa0270290:CDS
GTGCTTGATCATAGCTCTGC+TGG 0.368496 2_3:-1565065 None:intergenic
GAGGGATTCCCTCGGTTGTT+TGG 0.372916 2_3:-1564874 None:intergenic
ATGCGCCACGGCAGAACTTT+GGG 0.375645 2_3:+1565265 Msa0270290:CDS
TGATAGTAGTTTGGATCTCC+TGG 0.381637 2_3:+1565751 Msa0270290:exon
AGCATGATTATTCCCCTTCT+GGG 0.387365 2_3:-1565478 None:intergenic
CCAAGGGATGGTAGAAACTA+TGG 0.387810 2_3:+1564919 Msa0270290:CDS
ATGTCAAATACGACGTCGTT+TGG 0.388549 2_3:-1566062 None:intergenic
TTCTTTCTCCTTGTCCTGGC+GGG 0.390261 2_3:-1565338 None:intergenic
CCTCCATACTGCTTGTTCAC+AGG 0.391130 2_3:-1564580 None:intergenic
TACAAAGAATGTGGTATGTA+AGG 0.397330 2_3:+1565892 Msa0270290:three_prime_UTR
TATGCGCCACGGCAGAACTT+TGG 0.400286 2_3:+1565264 Msa0270290:CDS
ATGAAATAGAACCGGTAATT+GGG 0.400337 2_3:-1563675 None:intergenic
TTTCCACCTCAACAGAACTA+TGG 0.401446 2_3:+1564955 Msa0270290:CDS
TGCTTGATCATAGCTCTGCT+GGG 0.408969 2_3:-1565064 None:intergenic
ACCGGATATTTGGTTGTTGT+TGG 0.414885 2_3:-1565014 None:intergenic
GGAATCCCTCTTACAACAAT+CGG 0.421869 2_3:+1564887 Msa0270290:CDS
GTACAATTTGGGAGAAATCT+AGG 0.426083 2_3:+1564817 Msa0270290:CDS
TTTCTTCTTTCTCCTTGTCC+TGG 0.430267 2_3:-1565342 None:intergenic
GACCTCCACCAGTACAATTT+GGG 0.430347 2_3:+1564806 Msa0270290:CDS
AGGACCATAGGTTTGCTGTT+TGG 0.430424 2_3:-1565178 None:intergenic
TATCCACCCAAACAAAACTA+TGG 0.437816 2_3:+1565096 Msa0270290:CDS
GACCCTGTGAACAAGCAGTA+TGG 0.438673 2_3:+1564577 Msa0270290:CDS
CGAATCATTTCTTCAGGTGG+AGG 0.439284 2_3:-1563901 None:intergenic
TATGCGCCACAGCAGAACTT+TGG 0.449668 2_3:+1565366 Msa0270290:CDS
GATTGCATGTCCTTGCCAAT+GGG 0.450211 2_3:+1565812 Msa0270290:three_prime_UTR
TTTCTTCTTTCTCCTTCTCC+CGG 0.453717 2_3:-1565240 None:intergenic
GAAGAGTCCAAGAAATTTGA+AGG 0.456510 2_3:+1564137 Msa0270290:CDS
CAGGAGGCGGAAATCTTTGT+TGG 0.457098 2_3:-1565518 None:intergenic
GCCAACAACAACCAAATATC+CGG 0.458194 2_3:+1565013 Msa0270290:CDS
TCAAATTCCTCCATATATGA+TGG 0.460060 2_3:-1565450 None:intergenic
TTTCCTCTTTCTCCCTGTCC+CGG 0.461374 2_3:-1565393 None:intergenic
TATCCACCACAGCAGAGCTT+TGG 0.463958 2_3:+1565213 Msa0270290:CDS
GAACTTTGGACCACCGGGAC+AGG 0.464751 2_3:+1565380 Msa0270290:CDS
CGAGGTTGATCTGAATGAAC+GGG 0.468117 2_3:-1563746 None:intergenic
ACAGCAGAGCTTTGGACCAC+CGG 0.470038 2_3:+1565221 Msa0270290:CDS
GGAATCCCGATTGTTGTAAG+AGG 0.470092 2_3:-1564893 None:intergenic
CAACAAAGATTTCCGCCTCC+TGG 0.472277 2_3:+1565519 Msa0270290:CDS
AGATTTCTCCCAAATTGTAC+TGG 0.474613 2_3:-1564814 None:intergenic
AATTGTACTGGTGGAGGTCG+AGG 0.477720 2_3:-1564802 None:intergenic
GATTCGATTATTGACCCCAT+TGG 0.480674 2_3:-1565827 None:intergenic
CGGCAGAACTTTGGGCCACC+GGG 0.483926 2_3:+1565273 Msa0270290:CDS
TTATGAAGAAACTTGTGCTA+AGG 0.485239 2_3:+1563927 Msa0270290:CDS
ACGGCAGAACTTTGGGCCAC+CGG 0.489335 2_3:+1565272 Msa0270290:CDS
TATGAAGAAACTTGTGCTAA+GGG 0.489463 2_3:+1563928 Msa0270290:CDS
ATGGTGTCAGGACCAATCTC+AGG 0.489874 2_3:-1563814 None:intergenic
GGTGGAGGTTTGTTATCTCT+GGG 0.493016 2_3:-1563886 None:intergenic
CCTTCGAAGAGGATGGTGTC+AGG 0.493439 2_3:-1563826 None:intergenic
CTCCATACTGCTTGTTCACA+GGG 0.493888 2_3:-1564579 None:intergenic
CCAGTAAAATTGCTAGGGCC+AGG 0.494495 2_3:-1565537 None:intergenic
CCACCGGGACAGGGAGAAAG+AGG 0.494921 2_3:+1565390 Msa0270290:CDS
CGAAGTCGCAGTAGCTGAGA+AGG 0.498879 2_3:-1563644 None:intergenic
CTCCCAAATTGTACTGGTGG+AGG 0.499376 2_3:-1564808 None:intergenic
TCAGAACTCAGTCCTGAGAT+TGG 0.500163 2_3:+1563802 Msa0270290:CDS
AGGAGGCGGAAATCTTTGTT+GGG 0.503310 2_3:-1565517 None:intergenic
ACAGCAGAACTTTGGACCAC+CGG 0.505295 2_3:+1565374 Msa0270290:CDS
GATAGTAGTTTGGATCTCCT+GGG 0.505442 2_3:+1565752 Msa0270290:exon
GGCGGTGGTTGGAGAGAGTA+GGG 0.506484 2_3:-1563560 None:intergenic
TTACATAAGCAGGCAGCAGC+TGG 0.507777 2_3:-1565921 None:intergenic
ACAGGGTCAATGTAAGAATC+CGG 0.508563 2_3:-1564562 None:intergenic
TGATTGCATGTCCTTGCCAA+TGG 0.509203 2_3:+1565811 Msa0270290:three_prime_UTR
AAAATGTGATGAAATAGAAC+CGG 0.509305 2_3:-1563683 None:intergenic
TCTCTCTTGTCTTCTCGCTA+CGG 0.509897 2_3:+1563772 Msa0270290:CDS
CTTCTTCTGTCTACTTCTCC+CGG 0.510565 2_3:-1565291 None:intergenic
TGAGAAGGAGTGGTGGAGGC+CGG 0.512480 2_3:-1563629 None:intergenic
TAACAAATAAGTTAGAGATA+GGG 0.512918 2_3:-1565999 None:intergenic
AAGGTTGCGATTACAATCAC+TGG 0.516564 2_3:+1563845 Msa0270290:CDS
TATTCCAAACAGCAAACCTA+TGG 0.521162 2_3:+1565174 Msa0270290:CDS
GAGAATTAGCGACGATGCCA+TGG 0.522594 2_3:-1563581 None:intergenic
GCTGCGATGCTGAATCAAAC+CGG 0.524624 2_3:-1565032 None:intergenic
CTGTGCCTAGTGAAGGTGGA+TGG 0.529404 2_3:+1565418 Msa0270290:CDS
GTGATCTCAGGCTACGGCGG+AGG 0.532432 2_3:-1563603 None:intergenic
GGTGGATACTGTGGCGAAGC+AGG 0.533094 2_3:-1565198 None:intergenic
CCATAGTTTCTACCATCCCT+TGG 0.533589 2_3:-1564919 None:intergenic
TGCAGTACAACTGTTTACAC+TGG 0.536636 2_3:+1564092 Msa0270290:CDS
ACCTCTCCAGTAAAATTGCT+AGG 0.537861 2_3:-1565543 None:intergenic
CATTGTCACATACAATGTCT+TGG 0.540618 2_3:-1565969 None:intergenic
AAACGAATCATTTCTTCAGG+TGG 0.541590 2_3:-1563904 None:intergenic
TAGCTGAGAAGGAGTGGTGG+AGG 0.542761 2_3:-1563633 None:intergenic
GAATCCCTCTTACAACAATC+GGG 0.542891 2_3:+1564888 Msa0270290:CDS
AGCTTTGGACCACCGGGAGA+AGG 0.543753 2_3:+1565228 Msa0270290:CDS
GGAATTTGAACAAGCCCAGA+AGG 0.546452 2_3:+1565464 Msa0270290:CDS
AAATCCCATCCACCTTCACT+AGG 0.549954 2_3:-1565423 None:intergenic
TGATCATAGCTCTGCTGGGG+TGG 0.551769 2_3:-1565060 None:intergenic
CTTCTTTCTCCTTGTCCTGG+CGG 0.551794 2_3:-1565339 None:intergenic
TAGCGACGATGCCATGGCGG+TGG 0.552180 2_3:-1563575 None:intergenic
GACGATGCCATGGCGGTGGT+TGG 0.556448 2_3:-1563571 None:intergenic
CTGTGGCGAAGCAGGACCAT+AGG 0.556513 2_3:-1565190 None:intergenic
GTGGAGGAATGTGTGATGCT+TGG 0.556911 2_3:-1564978 None:intergenic
GGTCCAAAGCTCTGCTGTGG+TGG 0.557931 2_3:-1565216 None:intergenic
TTTCTCCCAAATTGTACTGG+TGG 0.558252 2_3:-1564811 None:intergenic
ACAGGAGATCAGTACATTGA+AGG 0.559699 2_3:+1564769 Msa0270290:intron
TCGAGGTTGATCTGAATGAA+CGG 0.562081 2_3:-1563747 None:intergenic
AACTTCAGCAAGGACCTCCC+AGG 0.563026 2_3:-1565769 None:intergenic
AACGCCGTCGACGACGTTTG+GGG 0.563351 2_3:-1563719 None:intergenic
GTTTCTACCATCCCTTGGCA+TGG 0.563433 2_3:-1564914 None:intergenic
TGGCGGTGGTTGGAGAGAGT+AGG 0.564065 2_3:-1563561 None:intergenic
TGTGCCTAGTGAAGGTGGAT+GGG 0.564317 2_3:+1565419 Msa0270290:CDS
GGCAACACAAAGATAACTCC+GGG 0.564421 2_3:-1564541 None:intergenic
CAGCAGAACTTTGGACCACC+GGG 0.568755 2_3:+1565375 Msa0270290:CDS
AACTCTGTGCCTAGTGAAGG+TGG 0.569286 2_3:+1565414 Msa0270290:CDS
CAGCAGAGCTTTGGACCACC+GGG 0.574321 2_3:+1565222 Msa0270290:CDS
CGGCAACACAAAGATAACTC+CGG 0.575792 2_3:-1564542 None:intergenic
GATTATTGACCCCATTGGCA+AGG 0.576302 2_3:-1565822 None:intergenic
GGAGGCCGGAGAGTGATCTC+AGG 0.580525 2_3:-1563615 None:intergenic
TCGCAGTAGCTGAGAAGGAG+TGG 0.580953 2_3:-1563639 None:intergenic
CCTGACACCATCCTCTTCGA+AGG 0.582398 2_3:+1563826 Msa0270290:CDS
TAATCATGCTGAAGAACAGA+CGG 0.584349 2_3:+1565491 Msa0270290:CDS
GGAAACTCTGTGCCTAGTGA+AGG 0.586295 2_3:+1565411 Msa0270290:CDS
GAATCCCGATTGTTGTAAGA+GGG 0.586300 2_3:-1564892 None:intergenic
AACTTTGGACCACCGGGACA+GGG 0.587378 2_3:+1565381 Msa0270290:CDS
CCTCTTTCTCCCTGTCCCGG+TGG 0.592801 2_3:-1565390 None:intergenic
CCTCTCCAGTAAAATTGCTA+GGG 0.592900 2_3:-1565542 None:intergenic
TAGGAGGAAGACGAGACTAT+CGG 0.594936 2_3:+1564836 Msa0270290:CDS
CGGGATTCCATGCCAAGGGA+TGG 0.595865 2_3:+1564907 Msa0270290:CDS
AGCTATGATCAAGCACCACA+AGG 0.596634 2_3:+1565072 Msa0270290:CDS
CTCTGCTGTGGTGGATACTG+TGG 0.600550 2_3:-1565207 None:intergenic
CGGAGAGTGATCTCAGGCTA+CGG 0.601292 2_3:-1563609 None:intergenic
TGGCCATAGTTCTGTTGAGG+TGG 0.603738 2_3:-1564958 None:intergenic
GCTTGGCCATAGTTCTGTTG+AGG 0.603846 2_3:-1564961 None:intergenic
ATTGTACTGGTGGAGGTCGA+GGG 0.609778 2_3:-1564801 None:intergenic
AAATTGCTAGGGCCAGGAGG+CGG 0.610340 2_3:-1565531 None:intergenic
ATCAATTGCCAAACAACCGA+GGG 0.610471 2_3:+1564866 Msa0270290:CDS
CTTCTTTCTCCTTCTCCCGG+TGG 0.610979 2_3:-1565237 None:intergenic
TGTTGTAAGAGGGATTCCCT+CGG 0.611597 2_3:-1564882 None:intergenic
AATCATGCTGAAGAACAGAC+GGG 0.612561 2_3:+1565492 Msa0270290:CDS
AAATCCCCAAACGTCGTCGA+CGG 0.615141 2_3:+1563715 Msa0270290:CDS
ATCGCAACCTTCGAAGAGGA+TGG 0.615614 2_3:-1563833 None:intergenic
CAGTAGCTGAGAAGGAGTGG+TGG 0.617757 2_3:-1563636 None:intergenic
GGTGGTCCAAAGTTCTGCTG+TGG 0.619499 2_3:-1565372 None:intergenic
ACTCTCTCCAACCACCGCCA+TGG 0.624268 2_3:+1563564 Msa0270290:exon
GGTGGCCCAAAGTTCTGCCG+TGG 0.626931 2_3:-1565270 None:intergenic
TTTGTAATGAAAACAGAACA+TGG 0.627428 2_3:-1565875 None:intergenic
GGTGGTCCAAAGCTCTGCTG+TGG 0.627905 2_3:-1565219 None:intergenic
GAATTTGAACAAGCCCAGAA+GGG 0.628457 2_3:+1565465 Msa0270290:CDS
AGAAGACAAGAGAGAAATCG+AGG 0.630277 2_3:-1563764 None:intergenic
TTTCAAACCATCATATATGG+AGG 0.632324 2_3:+1565443 Msa0270290:CDS
ATTCCTCCACAACAAAACAT+TGG 0.633304 2_3:+1564991 Msa0270290:CDS
CAATCGGGATTCCATGCCAA+GGG 0.634508 2_3:+1564903 Msa0270290:CDS
ATTGCATGTCCTTGCCAATG+GGG 0.637692 2_3:+1565813 Msa0270290:three_prime_UTR
AATTTGAACAAGCCCAGAAG+GGG 0.637787 2_3:+1565466 Msa0270290:CDS
ACAATCGGGATTCCATGCCA+AGG 0.637883 2_3:+1564902 Msa0270290:CDS
AAAGAAGAAATTATGCGCCA+CGG 0.637957 2_3:+1565253 Msa0270290:CDS
AATCAATTGCCAAACAACCG+AGG 0.644295 2_3:+1564865 Msa0270290:CDS
CGCTTGATTGAAGTTCTGCG+AGG 0.644978 2_3:-1565142 None:intergenic
GCTTGATCATAGCTCTGCTG+GGG 0.651267 2_3:-1565063 None:intergenic
GCAATTTGGTAACTTCAGCA+AGG 0.651404 2_3:-1565779 None:intergenic
TGTAATCGCAACCTTCGAAG+AGG 0.655228 2_3:-1563837 None:intergenic
TGTTTGGGTGGATACCCTTG+TGG 0.664703 2_3:-1565087 None:intergenic
GTAAAATTGCTAGGGCCAGG+AGG 0.666157 2_3:-1565534 None:intergenic
CCTGTGAACAAGCAGTATGG+AGG 0.671051 2_3:+1564580 Msa0270290:CDS
GCTATGATCAAGCACCACAA+GGG 0.671691 2_3:+1565073 Msa0270290:CDS
AGTAGTTTGGATCTCCTGGG+AGG 0.674854 2_3:+1565755 Msa0270290:three_prime_UTR
CGTAGCCTGAGATCACTCTC+CGG 0.691705 2_3:+1563610 Msa0270290:CDS
CTTCTGTCTACTTCTCCCGG+TGG 0.703848 2_3:-1565288 None:intergenic
AGAGTGATCTCAGGCTACGG+CGG 0.711287 2_3:-1563606 None:intergenic
AATTAGCGACGATGCCATGG+CGG 0.721913 2_3:-1563578 None:intergenic
CAATTTGGGAGAAATCTAGG+AGG 0.741053 2_3:+1564820 Msa0270290:CDS
ATCATGCTGAAGAACAGACG+GGG 0.746376 2_3:+1565493 Msa0270290:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTAGAAAGATTAATATTA+TGG + chr2_3:1564002-1564021 Msa0270290:intron 10.0%
!!! GTAAATTAAAAAAGTAATTT+TGG + chr2_3:1564300-1564319 Msa0270290:intron 10.0%
!!! TTATACAATGTATCATTTTT+TGG - chr2_3:1564417-1564436 None:intergenic 15.0%
!! AACAAAAAAAAAAATTGCAA+AGG + chr2_3:1565612-1565631 Msa0270290:intron 15.0%
!! TTGAATTGTGTAAATTATAA+AGG - chr2_3:1566026-1566045 None:intergenic 15.0%
!!! AATGCAAGCTATTTTATTTA+TGG + chr2_3:1564678-1564697 Msa0270290:intron 20.0%
!! TTTATGGTTTCTTAAATACT+TGG + chr2_3:1564694-1564713 Msa0270290:intron 20.0%
!!! TTGTTTTTGTTATTTTATGC+AGG + chr2_3:1565720-1565739 Msa0270290:intron 20.0%
!!! TGTTTTTGTTATTTTATGCA+GGG + chr2_3:1565721-1565740 Msa0270290:intron 20.0%
!! TAACAAATAAGTTAGAGATA+GGG - chr2_3:1566002-1566021 None:intergenic 20.0%
!! ATAACAAATAAGTTAGAGAT+AGG - chr2_3:1566003-1566022 None:intergenic 20.0%
! AAAATGTGATGAAATAGAAC+CGG - chr2_3:1563686-1563705 None:intergenic 25.0%
! TAAAAACGAATCATTTCTTC+AGG - chr2_3:1563910-1563929 None:intergenic 25.0%
!!! TGATTTTTTTAGTGTTGAAG+AGG + chr2_3:1564049-1564068 Msa0270290:intron 25.0%
! ACAAATACCTTCAAATTTCT+TGG - chr2_3:1564147-1564166 None:intergenic 25.0%
! CAATGAAATCTAATCTAAGT+CGG - chr2_3:1564178-1564197 None:intergenic 25.0%
! CTTTCTAATCTATAACAAAC+AGG - chr2_3:1564214-1564233 None:intergenic 25.0%
! AATAGGTCAATGAAATCTAA+GGG - chr2_3:1564467-1564486 None:intergenic 25.0%
! AAATAGGTCAATGAAATCTA+AGG - chr2_3:1564468-1564487 None:intergenic 25.0%
! TCTATTGTCTCAACTAAAAT+AGG - chr2_3:1564484-1564503 None:intergenic 25.0%
!! GAGACAATAGAAAATGATTT+TGG + chr2_3:1564493-1564512 Msa0270290:intron 25.0%
! ATTTATTTGAGAGCAACTTT+CGG + chr2_3:1564738-1564757 Msa0270290:intron 25.0%
! AATCAACTTAGAATGCAATT+TGG - chr2_3:1565796-1565815 None:intergenic 25.0%
! TTTGTAATGAAAACAGAACA+TGG - chr2_3:1565878-1565897 None:intergenic 25.0%
!! TGTTTTCATTACAAAGAATG+TGG + chr2_3:1565883-1565902 Msa0270290:three_prime_UTR 25.0%
!! GTTCAAAATTTTACATAAGC+AGG - chr2_3:1565934-1565953 None:intergenic 25.0%
!! GCTTATGTAAAATTTTGAAC+TGG + chr2_3:1565934-1565953 Msa0270290:three_prime_UTR 25.0%
ATGAAATAGAACCGGTAATT+GGG - chr2_3:1563678-1563697 None:intergenic 30.0%
TTATGAAGAAACTTGTGCTA+AGG + chr2_3:1563927-1563946 Msa0270290:CDS 30.0%
TATGAAGAAACTTGTGCTAA+GGG + chr2_3:1563928-1563947 Msa0270290:CDS 30.0%
GATTTCATTGACCTAGTTTA+TGG + chr2_3:1564188-1564207 Msa0270290:intron 30.0%
ATTCTTAAAGAAGCCACAAA+TGG + chr2_3:1564440-1564459 Msa0270290:intron 30.0%
TTCTTAAAGAAGCCACAAAT+GGG + chr2_3:1564441-1564460 Msa0270290:intron 30.0%
GGATTTCAAACCATCATATA+TGG + chr2_3:1565440-1565459 Msa0270290:CDS 30.0%
TTTCAAACCATCATATATGG+AGG + chr2_3:1565443-1565462 Msa0270290:CDS 30.0%
TCAAATTCCTCCATATATGA+TGG - chr2_3:1565453-1565472 None:intergenic 30.0%
! AGAGGTATGATAGAATAGAA+TGG + chr2_3:1565560-1565579 Msa0270290:intron 30.0%
TACACATGATTCGTAAAACA+AGG - chr2_3:1565649-1565668 None:intergenic 30.0%
!! GGAAGATTTTGATAGTAGTT+TGG + chr2_3:1565742-1565761 Msa0270290:exon 30.0%
TACAAAGAATGTGGTATGTA+AGG + chr2_3:1565892-1565911 Msa0270290:three_prime_UTR 30.0%
!!! TTTTGGTTTTGGTGAGAGTA+GGG - chr2_3:1563534-1563553 None:intergenic 35.0%
!!! TAGGGTTTTGGTTTTGGTTT+TGG - chr2_3:1563545-1563564 None:intergenic 35.0%
GATGAAATAGAACCGGTAAT+TGG - chr2_3:1563679-1563698 None:intergenic 35.0%
AAACGAATCATTTCTTCAGG+TGG - chr2_3:1563907-1563926 None:intergenic 35.0%
GAAGAGTCCAAGAAATTTGA+AGG + chr2_3:1564137-1564156 Msa0270290:CDS 35.0%
TAACAAACAGGCCATAAACT+AGG - chr2_3:1564202-1564221 None:intergenic 35.0%
AGATTTCTCCCAAATTGTAC+TGG - chr2_3:1564817-1564836 None:intergenic 35.0%
GTACAATTTGGGAGAAATCT+AGG + chr2_3:1564817-1564836 Msa0270290:CDS 35.0%
! TGTTGAGGTGGAAAATTTTG+TGG - chr2_3:1564949-1564968 None:intergenic 35.0%
ATTCCTCCACAACAAAACAT+TGG + chr2_3:1564991-1565010 Msa0270290:CDS 35.0%
TATCCACCCAAACAAAACTA+TGG + chr2_3:1565096-1565115 Msa0270290:CDS 35.0%
!!! GCTTGACCATAGTTTTGTTT+GGG - chr2_3:1565105-1565124 None:intergenic 35.0%
!!! AGCTTGACCATAGTTTTGTT+TGG - chr2_3:1565106-1565125 None:intergenic 35.0%
!! TGCTGTTTGGAATAGTTTTG+TGG - chr2_3:1565168-1565187 None:intergenic 35.0%
TATTCCAAACAGCAAACCTA+TGG + chr2_3:1565174-1565193 Msa0270290:CDS 35.0%
AAAGAAGAAATTATGCGCCA+CGG + chr2_3:1565253-1565272 Msa0270290:CDS 35.0%
TAATCATGCTGAAGAACAGA+CGG + chr2_3:1565491-1565510 Msa0270290:CDS 35.0%
CGAATCATGTGTACTGTAAA+TGG + chr2_3:1565656-1565675 Msa0270290:intron 35.0%
CATTGTCACATACAATGTCT+TGG - chr2_3:1565972-1565991 None:intergenic 35.0%
!!! GTTTTGGTTTTGGTGAGAGT+AGG - chr2_3:1563535-1563554 None:intergenic 40.0%
!!! AGAGAGTAGGGTTTTGGTTT+TGG - chr2_3:1563551-1563570 None:intergenic 40.0%
! TCGAGGTTGATCTGAATGAA+CGG - chr2_3:1563750-1563769 None:intergenic 40.0%
AGAAGACAAGAGAGAAATCG+AGG - chr2_3:1563767-1563786 None:intergenic 40.0%
AAGGTTGCGATTACAATCAC+TGG + chr2_3:1563845-1563864 Msa0270290:CDS 40.0%
GTGCTAAGGGTTTCAATATC+AGG + chr2_3:1563941-1563960 Msa0270290:CDS 40.0%
TGCAGTACAACTGTTTACAC+TGG + chr2_3:1564092-1564111 Msa0270290:CDS 40.0%
ACAGGGTCAATGTAAGAATC+CGG - chr2_3:1564565-1564584 None:intergenic 40.0%
ACAGGAGATCAGTACATTGA+AGG + chr2_3:1564769-1564788 Msa0270290:intron 40.0%
TTTCTCCCAAATTGTACTGG+TGG - chr2_3:1564814-1564833 None:intergenic 40.0%
CAATTTGGGAGAAATCTAGG+AGG + chr2_3:1564820-1564839 Msa0270290:CDS 40.0%
AATCAATTGCCAAACAACCG+AGG + chr2_3:1564865-1564884 Msa0270290:CDS 40.0%
ATCAATTGCCAAACAACCGA+GGG + chr2_3:1564866-1564885 Msa0270290:CDS 40.0%
GGAATCCCTCTTACAACAAT+CGG + chr2_3:1564887-1564906 Msa0270290:CDS 40.0%
GAATCCCTCTTACAACAATC+GGG + chr2_3:1564888-1564907 Msa0270290:CDS 40.0%
GAATCCCGATTGTTGTAAGA+GGG - chr2_3:1564895-1564914 None:intergenic 40.0%
! TGAGGTGGAAAATTTTGTGG+AGG - chr2_3:1564946-1564965 None:intergenic 40.0%
TTTCCACCTCAACAGAACTA+TGG + chr2_3:1564955-1564974 Msa0270290:CDS 40.0%
!! TGTTGGCCAATGTTTTGTTG+TGG - chr2_3:1565000-1565019 None:intergenic 40.0%
GCCAACAACAACCAAATATC+CGG + chr2_3:1565013-1565032 Msa0270290:CDS 40.0%
ACCGGATATTTGGTTGTTGT+TGG - chr2_3:1565017-1565036 None:intergenic 40.0%
GCTGAATCAAACCGGATATT+TGG - chr2_3:1565027-1565046 None:intergenic 40.0%
!!! TGACCATAGTTTTGTTTGGG+TGG - chr2_3:1565102-1565121 None:intergenic 40.0%
! TGCGAGGCTGAATAATTTTG+TGG - chr2_3:1565129-1565148 None:intergenic 40.0%
TTTCTTCTTTCTCCTTCTCC+CGG - chr2_3:1565243-1565262 None:intergenic 40.0%
TTTCTTCTTTCTCCTTGTCC+TGG - chr2_3:1565345-1565364 None:intergenic 40.0%
GAATTTGAACAAGCCCAGAA+GGG + chr2_3:1565465-1565484 Msa0270290:CDS 40.0%
AATTTGAACAAGCCCAGAAG+GGG + chr2_3:1565466-1565485 Msa0270290:CDS 40.0%
AGCATGATTATTCCCCTTCT+GGG - chr2_3:1565481-1565500 None:intergenic 40.0%
AATCATGCTGAAGAACAGAC+GGG + chr2_3:1565492-1565511 Msa0270290:CDS 40.0%
CCTCTCCAGTAAAATTGCTA+GGG - chr2_3:1565545-1565564 None:intergenic 40.0%
ACCTCTCCAGTAAAATTGCT+AGG - chr2_3:1565546-1565565 None:intergenic 40.0%
TGATAGTAGTTTGGATCTCC+TGG + chr2_3:1565751-1565770 Msa0270290:exon 40.0%
GATAGTAGTTTGGATCTCCT+GGG + chr2_3:1565752-1565771 Msa0270290:exon 40.0%
! GCAATTTGGTAACTTCAGCA+AGG - chr2_3:1565782-1565801 None:intergenic 40.0%
GATTCGATTATTGACCCCAT+TGG - chr2_3:1565830-1565849 None:intergenic 40.0%
!!! GAGTAGGGTTTTGAGAAGCT+TGG - chr2_3:1563519-1563538 None:intergenic 45.0%
! CGAGGTTGATCTGAATGAAC+GGG - chr2_3:1563749-1563768 None:intergenic 45.0%
TCTCTCTTGTCTTCTCGCTA+CGG + chr2_3:1563772-1563791 Msa0270290:CDS 45.0%
TCAGAACTCAGTCCTGAGAT+TGG + chr2_3:1563802-1563821 Msa0270290:CDS 45.0%
TGTAATCGCAACCTTCGAAG+AGG - chr2_3:1563840-1563859 None:intergenic 45.0%
!! GGTGGAGGTTTGTTATCTCT+GGG - chr2_3:1563889-1563908 None:intergenic 45.0%
!! AGGTGGAGGTTTGTTATCTC+TGG - chr2_3:1563890-1563909 None:intergenic 45.0%
CGAATCATTTCTTCAGGTGG+AGG - chr2_3:1563904-1563923 None:intergenic 45.0%
GAAATCTAAGGGCCCATTTG+TGG - chr2_3:1564456-1564475 None:intergenic 45.0%
! GGATTGTTGTGCTTTTCGAC+AGG + chr2_3:1564514-1564533 Msa0270290:intron 45.0%
GGCAACACAAAGATAACTCC+GGG - chr2_3:1564544-1564563 None:intergenic 45.0%
CGGCAACACAAAGATAACTC+CGG - chr2_3:1564545-1564564 None:intergenic 45.0%
CGGAGTTATCTTTGTGTTGC+CGG + chr2_3:1564543-1564562 Msa0270290:CDS 45.0%
CTCCATACTGCTTGTTCACA+GGG - chr2_3:1564582-1564601 None:intergenic 45.0%
ATTTATCGTCTCTCGCGTTC+TGG + chr2_3:1564621-1564640 Msa0270290:intron 45.0%
! CAACTTTCGGTGTGTGATAC+AGG + chr2_3:1564751-1564770 Msa0270290:intron 45.0%
GACCTCCACCAGTACAATTT+GGG + chr2_3:1564806-1564825 Msa0270290:CDS 45.0%
TAGGAGGAAGACGAGACTAT+CGG + chr2_3:1564836-1564855 Msa0270290:CDS 45.0%
TGTTGTAAGAGGGATTCCCT+CGG - chr2_3:1564885-1564904 None:intergenic 45.0%
GGAATCCCGATTGTTGTAAG+AGG - chr2_3:1564896-1564915 None:intergenic 45.0%
CCATAGTTTCTACCATCCCT+TGG - chr2_3:1564922-1564941 None:intergenic 45.0%
CCAAGGGATGGTAGAAACTA+TGG + chr2_3:1564919-1564938 Msa0270290:CDS 45.0%
!! TGGCCAATGTTTTGTTGTGG+AGG - chr2_3:1564997-1565016 None:intergenic 45.0%
! TGCTTGATCATAGCTCTGCT+GGG - chr2_3:1565067-1565086 None:intergenic 45.0%
AGCTATGATCAAGCACCACA+AGG + chr2_3:1565072-1565091 Msa0270290:CDS 45.0%
GCTATGATCAAGCACCACAA+GGG + chr2_3:1565073-1565092 Msa0270290:CDS 45.0%
!! AGGACCATAGGTTTGCTGTT+TGG - chr2_3:1565181-1565200 None:intergenic 45.0%
CTTCTTCTGTCTACTTCTCC+CGG - chr2_3:1565294-1565313 None:intergenic 45.0%
! TATGCGCCGCAGCAAAATTT+TGG + chr2_3:1565315-1565334 Msa0270290:CDS 45.0%
AAATCCCATCCACCTTCACT+AGG - chr2_3:1565426-1565445 None:intergenic 45.0%
GGAATTTGAACAAGCCCAGA+AGG + chr2_3:1565464-1565483 Msa0270290:CDS 45.0%
CAGCATGATTATTCCCCTTC+TGG - chr2_3:1565482-1565501 None:intergenic 45.0%
ATCATGCTGAAGAACAGACG+GGG + chr2_3:1565493-1565512 Msa0270290:CDS 45.0%
AGGAGGCGGAAATCTTTGTT+GGG - chr2_3:1565520-1565539 None:intergenic 45.0%
! CCCTAGCAATTTTACTGGAG+AGG + chr2_3:1565542-1565561 Msa0270290:CDS 45.0%
TGATTGCATGTCCTTGCCAA+TGG + chr2_3:1565811-1565830 Msa0270290:three_prime_UTR 45.0%
GATTGCATGTCCTTGCCAAT+GGG + chr2_3:1565812-1565831 Msa0270290:three_prime_UTR 45.0%
ATTGCATGTCCTTGCCAATG+GGG + chr2_3:1565813-1565832 Msa0270290:three_prime_UTR 45.0%
GATTATTGACCCCATTGGCA+AGG - chr2_3:1565825-1565844 None:intergenic 45.0%
! GGTTGGAGAGAGTAGGGTTT+TGG - chr2_3:1563557-1563576 None:intergenic 50.0%
AATTAGCGACGATGCCATGG+CGG - chr2_3:1563581-1563600 None:intergenic 50.0%
GAGAATTAGCGACGATGCCA+TGG - chr2_3:1563584-1563603 None:intergenic 50.0%
AGCTACTGCGACTTCGCTTT+CGG + chr2_3:1563651-1563670 Msa0270290:CDS 50.0%
TCGCTTTCGGTCCCAATTAC+CGG + chr2_3:1563664-1563683 Msa0270290:CDS 50.0%
AAATCCCCAAACGTCGTCGA+CGG + chr2_3:1563715-1563734 Msa0270290:CDS 50.0%
! ATGGTGTCAGGACCAATCTC+AGG - chr2_3:1563817-1563836 None:intergenic 50.0%
ATCGCAACCTTCGAAGAGGA+TGG - chr2_3:1563836-1563855 None:intergenic 50.0%
! TGCTTTTCGACAGGTTTGCC+CGG + chr2_3:1564523-1564542 Msa0270290:intron 50.0%
GACCCTGTGAACAAGCAGTA+TGG + chr2_3:1564577-1564596 Msa0270290:CDS 50.0%
CCTCCATACTGCTTGTTCAC+AGG - chr2_3:1564583-1564602 None:intergenic 50.0%
CCTGTGAACAAGCAGTATGG+AGG + chr2_3:1564580-1564599 Msa0270290:CDS 50.0%
! ATTGTACTGGTGGAGGTCGA+GGG - chr2_3:1564804-1564823 None:intergenic 50.0%
! AATTGTACTGGTGGAGGTCG+AGG - chr2_3:1564805-1564824 None:intergenic 50.0%
CGACCTCCACCAGTACAATT+TGG + chr2_3:1564805-1564824 Msa0270290:CDS 50.0%
! CTCCCAAATTGTACTGGTGG+AGG - chr2_3:1564811-1564830 None:intergenic 50.0%
ACAATCGGGATTCCATGCCA+AGG + chr2_3:1564902-1564921 Msa0270290:CDS 50.0%
CAATCGGGATTCCATGCCAA+GGG + chr2_3:1564903-1564922 Msa0270290:CDS 50.0%
GTTTCTACCATCCCTTGGCA+TGG - chr2_3:1564917-1564936 None:intergenic 50.0%
! TGGCCATAGTTCTGTTGAGG+TGG - chr2_3:1564961-1564980 None:intergenic 50.0%
! GCTTGGCCATAGTTCTGTTG+AGG - chr2_3:1564964-1564983 None:intergenic 50.0%
GTGGAGGAATGTGTGATGCT+TGG - chr2_3:1564981-1565000 None:intergenic 50.0%
GCTGCGATGCTGAATCAAAC+CGG - chr2_3:1565035-1565054 None:intergenic 50.0%
! GCTTGATCATAGCTCTGCTG+GGG - chr2_3:1565066-1565085 None:intergenic 50.0%
! GTGCTTGATCATAGCTCTGC+TGG - chr2_3:1565068-1565087 None:intergenic 50.0%
TGTTTGGGTGGATACCCTTG+TGG - chr2_3:1565090-1565109 None:intergenic 50.0%
CGCTTGATTGAAGTTCTGCG+AGG - chr2_3:1565145-1565164 None:intergenic 50.0%
TATCCACCACAGCAGAGCTT+TGG + chr2_3:1565213-1565232 Msa0270290:CDS 50.0%
TTCTTTCTCCTTGTCCTGGC+GGG - chr2_3:1565341-1565360 None:intergenic 50.0%
CTTCTTTCTCCTTGTCCTGG+CGG - chr2_3:1565342-1565361 None:intergenic 50.0%
TATGCGCCACAGCAGAACTT+TGG + chr2_3:1565366-1565385 Msa0270290:CDS 50.0%
ACAGCAGAACTTTGGACCAC+CGG + chr2_3:1565374-1565393 Msa0270290:CDS 50.0%
TTTCCTCTTTCTCCCTGTCC+CGG - chr2_3:1565396-1565415 None:intergenic 50.0%
GGAAACTCTGTGCCTAGTGA+AGG + chr2_3:1565411-1565430 Msa0270290:CDS 50.0%
AACTCTGTGCCTAGTGAAGG+TGG + chr2_3:1565414-1565433 Msa0270290:CDS 50.0%
TGTGCCTAGTGAAGGTGGAT+GGG + chr2_3:1565419-1565438 Msa0270290:CDS 50.0%
CAGGAGGCGGAAATCTTTGT+TGG - chr2_3:1565521-1565540 None:intergenic 50.0%
CAACAAAGATTTCCGCCTCC+TGG + chr2_3:1565519-1565538 Msa0270290:CDS 50.0%
GTAAAATTGCTAGGGCCAGG+AGG - chr2_3:1565537-1565556 None:intergenic 50.0%
CCAGTAAAATTGCTAGGGCC+AGG - chr2_3:1565540-1565559 None:intergenic 50.0%
! CCTGGCCCTAGCAATTTTAC+TGG + chr2_3:1565537-1565556 Msa0270290:CDS 50.0%
AGTAGTTTGGATCTCCTGGG+AGG + chr2_3:1565755-1565774 Msa0270290:three_prime_UTR 50.0%
TTACATAAGCAGGCAGCAGC+TGG - chr2_3:1565924-1565943 None:intergenic 50.0%
AGAGTGATCTCAGGCTACGG+CGG - chr2_3:1563609-1563628 None:intergenic 55.0%
CGGAGAGTGATCTCAGGCTA+CGG - chr2_3:1563612-1563631 None:intergenic 55.0%
CGTAGCCTGAGATCACTCTC+CGG + chr2_3:1563610-1563629 Msa0270290:CDS 55.0%
TAGCTGAGAAGGAGTGGTGG+AGG - chr2_3:1563636-1563655 None:intergenic 55.0%
CAGTAGCTGAGAAGGAGTGG+TGG - chr2_3:1563639-1563658 None:intergenic 55.0%
TCGCAGTAGCTGAGAAGGAG+TGG - chr2_3:1563642-1563661 None:intergenic 55.0%
CGAAGTCGCAGTAGCTGAGA+AGG - chr2_3:1563647-1563666 None:intergenic 55.0%
CCTTCGAAGAGGATGGTGTC+AGG - chr2_3:1563829-1563848 None:intergenic 55.0%
CCTGACACCATCCTCTTCGA+AGG + chr2_3:1563826-1563845 Msa0270290:CDS 55.0%
GAGGGATTCCCTCGGTTGTT+TGG - chr2_3:1564877-1564896 None:intergenic 55.0%
! TGATCATAGCTCTGCTGGGG+TGG - chr2_3:1565063-1565082 None:intergenic 55.0%
!! CTCTGCTGTGGTGGATACTG+TGG - chr2_3:1565210-1565229 None:intergenic 55.0%
!! ACAGCAGAGCTTTGGACCAC+CGG + chr2_3:1565221-1565240 Msa0270290:CDS 55.0%
CTTCTTTCTCCTTCTCCCGG+TGG - chr2_3:1565240-1565259 None:intergenic 55.0%
TATGCGCCACGGCAGAACTT+TGG + chr2_3:1565264-1565283 Msa0270290:CDS 55.0%
ATGCGCCACGGCAGAACTTT+GGG + chr2_3:1565265-1565284 Msa0270290:CDS 55.0%
CTTCTGTCTACTTCTCCCGG+TGG - chr2_3:1565291-1565310 None:intergenic 55.0%
! GGCGGGCCAAAATTTTGCTG+CGG - chr2_3:1565324-1565343 None:intergenic 55.0%
!! CAGCAAAATTTTGGCCCGCC+AGG + chr2_3:1565324-1565343 Msa0270290:CDS 55.0%
!! AATTTTGGCCCGCCAGGACA+AGG + chr2_3:1565330-1565349 Msa0270290:CDS 55.0%
GGTGGTCCAAAGTTCTGCTG+TGG - chr2_3:1565375-1565394 None:intergenic 55.0%
CAGCAGAACTTTGGACCACC+GGG + chr2_3:1565375-1565394 Msa0270290:CDS 55.0%
AACTTTGGACCACCGGGACA+GGG + chr2_3:1565381-1565400 Msa0270290:CDS 55.0%
CTGTGCCTAGTGAAGGTGGA+TGG + chr2_3:1565418-1565437 Msa0270290:CDS 55.0%
AAATTGCTAGGGCCAGGAGG+CGG - chr2_3:1565534-1565553 None:intergenic 55.0%
AACTTCAGCAAGGACCTCCC+AGG - chr2_3:1565772-1565791 None:intergenic 55.0%
GGCGGTGGTTGGAGAGAGTA+GGG - chr2_3:1563563-1563582 None:intergenic 60.0%
TGGCGGTGGTTGGAGAGAGT+AGG - chr2_3:1563564-1563583 None:intergenic 60.0%
ACTCTCTCCAACCACCGCCA+TGG + chr2_3:1563564-1563583 Msa0270290:exon 60.0%
! TGAGAAGGAGTGGTGGAGGC+CGG - chr2_3:1563632-1563651 None:intergenic 60.0%
AACGCCGTCGACGACGTTTG+GGG - chr2_3:1563722-1563741 None:intergenic 60.0%
GAACGCCGTCGACGACGTTT+GGG - chr2_3:1563723-1563742 None:intergenic 60.0%
TGAACGCCGTCGACGACGTT+TGG - chr2_3:1563724-1563743 None:intergenic 60.0%
CGGGATTCCATGCCAAGGGA+TGG + chr2_3:1564907-1564926 Msa0270290:CDS 60.0%
CTGTGGCGAAGCAGGACCAT+AGG - chr2_3:1565193-1565212 None:intergenic 60.0%
GGTGGATACTGTGGCGAAGC+AGG - chr2_3:1565201-1565220 None:intergenic 60.0%
GGTCCAAAGCTCTGCTGTGG+TGG - chr2_3:1565219-1565238 None:intergenic 60.0%
GGTGGTCCAAAGCTCTGCTG+TGG - chr2_3:1565222-1565241 None:intergenic 60.0%
!! CAGCAGAGCTTTGGACCACC+GGG + chr2_3:1565222-1565241 Msa0270290:CDS 60.0%
!! AGCTTTGGACCACCGGGAGA+AGG + chr2_3:1565228-1565247 Msa0270290:CDS 60.0%
ACGGCAGAACTTTGGGCCAC+CGG + chr2_3:1565272-1565291 Msa0270290:CDS 60.0%
GAACTTTGGACCACCGGGAC+AGG + chr2_3:1565380-1565399 Msa0270290:CDS 60.0%
GACGATGCCATGGCGGTGGT+TGG - chr2_3:1563574-1563593 None:intergenic 65.0%
TAGCGACGATGCCATGGCGG+TGG - chr2_3:1563578-1563597 None:intergenic 65.0%
GTGATCTCAGGCTACGGCGG+AGG - chr2_3:1563606-1563625 None:intergenic 65.0%
GGAGGCCGGAGAGTGATCTC+AGG - chr2_3:1563618-1563637 None:intergenic 65.0%
GGTGGCCCAAAGTTCTGCCG+TGG - chr2_3:1565273-1565292 None:intergenic 65.0%
CGGCAGAACTTTGGGCCACC+GGG + chr2_3:1565273-1565292 Msa0270290:CDS 65.0%
CCTCTTTCTCCCTGTCCCGG+TGG - chr2_3:1565393-1565412 None:intergenic 65.0%
CCACCGGGACAGGGAGAAAG+AGG + chr2_3:1565390-1565409 Msa0270290:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 1563499 1566080 1563499 ID=Msa0270290;Name=Msa0270290
chr2_3 mRNA 1563499 1566080 1563499 ID=Msa0270290-mRNA-1;Parent=Msa0270290;Name=Msa0270290-mRNA-1;_AED=0.01;_eAED=0.01;_QI=84|1|1|1|1|1|5|327|448
chr2_3 exon 1563499 1563962 1563499 ID=Msa0270290-mRNA-1:exon:641;Parent=Msa0270290-mRNA-1
chr2_3 exon 1564061 1564158 1564061 ID=Msa0270290-mRNA-1:exon:642;Parent=Msa0270290-mRNA-1
chr2_3 exon 1564536 1564601 1564536 ID=Msa0270290-mRNA-1:exon:643;Parent=Msa0270290-mRNA-1
chr2_3 exon 1564773 1565563 1564773 ID=Msa0270290-mRNA-1:exon:644;Parent=Msa0270290-mRNA-1
chr2_3 exon 1565742 1566080 1565742 ID=Msa0270290-mRNA-1:exon:645;Parent=Msa0270290-mRNA-1
chr2_3 five_prime_UTR 1563499 1563582 1563499 ID=Msa0270290-mRNA-1:five_prime_utr;Parent=Msa0270290-mRNA-1
chr2_3 CDS 1563583 1563962 1563583 ID=Msa0270290-mRNA-1:cds;Parent=Msa0270290-mRNA-1
chr2_3 CDS 1564061 1564158 1564061 ID=Msa0270290-mRNA-1:cds;Parent=Msa0270290-mRNA-1
chr2_3 CDS 1564536 1564601 1564536 ID=Msa0270290-mRNA-1:cds;Parent=Msa0270290-mRNA-1
chr2_3 CDS 1564773 1565563 1564773 ID=Msa0270290-mRNA-1:cds;Parent=Msa0270290-mRNA-1
chr2_3 CDS 1565742 1565753 1565742 ID=Msa0270290-mRNA-1:cds;Parent=Msa0270290-mRNA-1
chr2_3 three_prime_UTR 1565754 1566080 1565754 ID=Msa0270290-mRNA-1:three_prime_utr;Parent=Msa0270290-mRNA-1
Gene Sequence

>Msa0270290

ATGGCATCGTCGCTAATTCTCCTCCGCCGTAGCCTGAGATCACTCTCCGGCCTCCACCACTCCTTCTCAGCTACTGCGACTTCGCTTTCGGTCCCAATTACCGGTTCTATTTCATCACATTTTTCACTTTCGAAATCCCCAAACGTCGTCGACGGCGTTCAATCCCGTTCATTCAGATCAACCTCGATTTCTCTCTTGTCTTCTCGCTACGGAGAAACATCAGAACTCAGTCCTGAGATTGGTCCTGACACCATCCTCTTCGAAGGTTGCGATTACAATCACTGGCTCATCGTTTGTGATTTTCCCAGAGATAACAAACCTCCACCTGAAGAAATGATTCGTTTTTATGAAGAAACTTGTGCTAAGGGTTTCAATATCAGTGTTGAAGAGGCGAAGAAGAAAATTTATGCTTGCAGTACAACTGTTTACACTGGATTTCAAGCTGTTATGACTGAAGAAGAGTCCAAGAAATTTGAAGGTTTGCCCGGAGTTATCTTTGTGTTGCCGGATTCTTACATTGACCCTGTGAACAAGCAGTATGGAGGAGATCAGTACATTGAAGGACAAATCATCCCTCGACCTCCACCAGTACAATTTGGGAGAAATCTAGGAGGAAGACGAGACTATCGGCAGAATAATCAATTGCCAAACAACCGAGGGAATCCCTCTTACAACAATCGGGATTCCATGCCAAGGGATGGTAGAAACTATGGACCTCCACAAAATTTTCCACCTCAACAGAACTATGGCCAAGCATCACACATTCCTCCACAACAAAACATTGGCCAACAACAACCAAATATCCGGTTTGATTCAGCATCGCAGCGTTTTCCACCCCAGCAGAGCTATGATCAAGCACCACAAGGGTATCCACCCAAACAAAACTATGGTCAAGCTCCACAAAATTATTCAGCCTCGCAGAACTTCAATCAAGCGCCACAAAACTATTCCAAACAGCAAACCTATGGTCCTGCTTCGCCACAGTATCCACCACAGCAGAGCTTTGGACCACCGGGAGAAGGAGAAAGAAGAAATTATGCGCCACGGCAGAACTTTGGGCCACCGGGAGAAGTAGACAGAAGAAGTTATGCGCCGCAGCAAAATTTTGGCCCGCCAGGACAAGGAGAAAGAAGAAATTATGCGCCACAGCAGAACTTTGGACCACCGGGACAGGGAGAAAGAGGAAACTCTGTGCCTAGTGAAGGTGGATGGGATTTCAAACCATCATATATGGAGGAATTTGAACAAGCCCAGAAGGGGAATAATCATGCTGAAGAACAGACGGGGTCCCAACAAAGATTTCCGCCTCCTGGCCCTAGCAATTTTACTGGAGAGGGAAGATTTTGA

Protein sequence

>Msa0270290

MASSLILLRRSLRSLSGLHHSFSATATSLSVPITGSISSHFSLSKSPNVVDGVQSRSFRSTSISLLSSRYGETSELSPEIGPDTILFEGCDYNHWLIVCDFPRDNKPPPEEMIRFYEETCAKGFNISVEEAKKKIYACSTTVYTGFQAVMTEEESKKFEGLPGVIFVLPDSYIDPVNKQYGGDQYIEGQIIPRPPPVQFGRNLGGRRDYRQNNQLPNNRGNPSYNNRDSMPRDGRNYGPPQNFPPQQNYGQASHIPPQQNIGQQQPNIRFDSASQRFPPQQSYDQAPQGYPPKQNYGQAPQNYSASQNFNQAPQNYSKQQTYGPASPQYPPQQSFGPPGEGERRNYAPRQNFGPPGEVDRRSYAPQQNFGPPGQGERRNYAPQQNFGPPGQGERGNSVPSEGGWDFKPSYMEEFEQAQKGNNHAEEQTGSQQRFPPPGPSNFTGEGRF*