AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0173150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173150 MtrunA17_Chr1g0192761 96.933 978 24 2 1 973 1 977 0.0 1935
Msa0173150 MtrunA17_Chr4g0055151 38.472 746 397 13 227 963 184 876 5.54e-154 477
Msa0173150 MtrunA17_Chr5g0400081 39.200 750 387 17 227 963 179 872 1.51e-147 460
Msa0173150 MtrunA17_Chr1g0192711 93.548 186 10 1 788 973 1 184 1.02e-116 355
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0173150 AT5G26860.1 72.774 977 222 7 1 970 46 985 0.0 1412
Msa0173150 AT3G05790.2 68.545 976 247 14 1 964 1 928 0.0 1276
Msa0173150 AT3G05790.1 67.781 987 247 15 1 964 1 939 0.0 1265
Msa0173150 AT3G05780.1 61.610 969 254 13 19 963 46 920 0.0 1139
Msa0173150 AT5G47040.1 37.685 743 407 10 227 963 183 875 3.90e-145 454
Msa0173150 AT3G05775.1 55.147 136 39 2 356 491 18 131 3.31e-43 154

Find 266 sgRNAs with CRISPR-Local

Find 813 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGATATTTACCTTCTTTA+TGG 0.118362 1_4:-58366573 None:intergenic
TATTTATTCAAATTTATATT+TGG 0.174457 1_4:+58372196 Msa0173150:three_prime_UTR
TATCCAAGGCTAGCAGATTT+TGG 0.196088 1_4:+58366109 Msa0173150:CDS
CAAACTATTGGCAGCTTTAC+AGG 0.199476 1_4:+58362709 Msa0173150:CDS
CAGATCTTTGATTTGGCTTT+TGG 0.207377 1_4:+58371949 Msa0173150:CDS
GAGTCGGAGTCATCGTTATT+TGG 0.208456 1_4:+58361149 Msa0173150:CDS
CAGAGTCTGGCTCATCTTTA+AGG 0.209228 1_4:-58362772 None:intergenic
GGTACTACTACCATTCAAAA+AGG 0.243783 1_4:+58370444 Msa0173150:CDS
CGCGACAAGAAAGGAAAATT+TGG 0.248028 1_4:+58360772 Msa0173150:five_prime_UTR
ATTCATCTTGTCCCGTGTTC+AGG 0.256690 1_4:+58372115 Msa0173150:three_prime_UTR
AAGAGTGGCGTGTTCGATTC+TGG 0.263849 1_4:-58360874 None:intergenic
AAATCTTCTTCAGCTTTCTT+TGG 0.265036 1_4:-58370411 None:intergenic
CTGGTTGACTGCACTGCCTT+GGG 0.267506 1_4:+58367634 Msa0173150:CDS
ATGAGCTTCAACATTGGATT+AGG 0.279204 1_4:-58361018 None:intergenic
AACACCTATTGGCGTTGTTA+TGG 0.279528 1_4:+58371121 Msa0173150:CDS
TTCTTAAAACAAGTTCTCTT+TGG 0.287368 1_4:+58363473 Msa0173150:CDS
ACAAGCAAGAAAGGACATTT+TGG 0.292654 1_4:+58360803 Msa0173150:five_prime_UTR
ACTGGGGAAGTGACACTTAC+AGG 0.295346 1_4:+58371464 Msa0173150:CDS
CTATATGCAGATCTTTGATT+TGG 0.296609 1_4:+58371942 Msa0173150:CDS
ATGGAGGTTGTTACTATTGC+TGG 0.307211 1_4:+58369813 Msa0173150:CDS
CTGTAAAGCTGCCAATAGTT+TGG 0.307431 1_4:-58362708 None:intergenic
AAGAGTGTATATGATTTAAA+AGG 0.309568 1_4:+58362827 Msa0173150:CDS
TGTAAAGCTGCCAATAGTTT+GGG 0.309772 1_4:-58362707 None:intergenic
CAACATTGGATTAGGGGATT+AGG 0.310764 1_4:-58361010 None:intergenic
ATCCTATCCAATAGGGGATT+TGG 0.313473 1_4:-58369792 None:intergenic
GCACATTGCAAGAGATTATC+TGG 0.313888 1_4:+58369857 Msa0173150:CDS
ATCTTTGATCAAACACCTAT+TGG 0.323599 1_4:+58371110 Msa0173150:CDS
ACACCTATTGGCGTTGTTAT+GGG 0.332720 1_4:+58371122 Msa0173150:CDS
TCATGTTGCGACTTACTCTA+AGG 0.333632 1_4:+58363501 Msa0173150:CDS
GATGGAAATCAGTAAGATTC+AGG 0.339212 1_4:+58366391 Msa0173150:CDS
TTCTGTTCGGAGTCGGAATC+CGG 0.342934 1_4:+58361186 Msa0173150:CDS
TTGCATATCACCGGTCAATT+AGG 0.347116 1_4:+58371224 Msa0173150:CDS
CGGAGAACCGGAACCGCGGC+GGG 0.348037 1_4:-58361069 None:intergenic
TGAGCTTCAACATTGGATTA+GGG 0.350002 1_4:-58361017 None:intergenic
AGGCATTGTACCATCTTTCC+TGG 0.351046 1_4:-58369211 None:intergenic
GGTGAACGTGTGAATTGAAT+TGG 0.351436 1_4:-58360989 None:intergenic
GAAAACTATTGCCGAGAATC+AGG 0.352602 1_4:+58370092 Msa0173150:CDS
AGTCGGAGTCATCGTTATTT+GGG 0.352726 1_4:+58361150 Msa0173150:CDS
GACGACAAGACAGCACTTAC+AGG 0.353278 1_4:+58367110 Msa0173150:CDS
AACCTCCATCCTATCCAATA+GGG 0.354645 1_4:-58369799 None:intergenic
CCAGCACTTGGTCCATCCTT+TGG 0.358352 1_4:-58371374 None:intergenic
CAGTGTTACCCGTAACTACT+TGG 0.360213 1_4:+58367610 Msa0173150:CDS
CAACCTCCATCCTATCCAAT+AGG 0.361697 1_4:-58369800 None:intergenic
TGATGTGAAGGAAAGAATAT+TGG 0.374667 1_4:+58368142 Msa0173150:CDS
ACTGGTTGACTGCACTGCCT+TGG 0.375558 1_4:+58367633 Msa0173150:CDS
TAGCATTCTGCTCGGGGTCT+AGG 0.389231 1_4:-58369534 None:intergenic
TGGCTGTTCCCACATTCTTA+AGG 0.390705 1_4:-58369231 None:intergenic
CACTGCCTTGGGGTGAATAC+AGG 0.393770 1_4:+58367645 Msa0173150:CDS
TCAAATAAATAAAACATGTT+TGG 0.394825 1_4:-58372219 None:intergenic
AAAATTGGCATGTAAAATCC+TGG 0.395201 1_4:-58362400 None:intergenic
GATGATACCAAATCCCCTAT+TGG 0.398960 1_4:+58369785 Msa0173150:CDS
GCAGAAGAAGCAGCCTTTGA+CGG 0.404688 1_4:-58361261 None:intergenic
TCGTTAATTGTGCAGCATAT+AGG 0.409197 1_4:+58366076 Msa0173150:intron
CTTCTTCACAGGCTTCTTCA+AGG 0.409313 1_4:-58371429 None:intergenic
AGCTCTAGCAAAGCACTTGC+TGG 0.410126 1_4:-58369511 None:intergenic
TTGTTCTATTTGCAGGAATT+GGG 0.411751 1_4:+58367077 Msa0173150:intron
AGGAGGAAGGCACCAGCATA+AGG 0.414304 1_4:-58362752 None:intergenic
CTAGCTCTTCAAGAACTTGT+TGG 0.416877 1_4:-58366165 None:intergenic
TCGGATGCCGGTCGGAGAAC+CGG 0.421239 1_4:-58361081 None:intergenic
CATCCAGGACCCCAAACTAT+TGG 0.421388 1_4:+58362697 Msa0173150:intron
ATTCTTGATGAAGACCATTA+CGG 0.422676 1_4:+58368113 Msa0173150:CDS
TAAGACTATAATATTTCCTT+CGG 0.430379 1_4:+58371849 Msa0173150:CDS
GGTAGGATCTTGAGATGAAC+CGG 0.430443 1_4:+58372015 Msa0173150:three_prime_UTR
AGTGAGGTAATCTTCAGGTC+TGG 0.432451 1_4:-58361301 None:intergenic
CGCTTCGCTTCCACCATCAA+TGG 0.432506 1_4:+58360907 Msa0173150:five_prime_UTR
AAAAGAAAGAGAGGAAGATA+AGG 0.435059 1_4:+58370998 Msa0173150:CDS
CGCGGTTCCGGTTCTCCGAC+CGG 0.435668 1_4:+58361074 Msa0173150:CDS
TTCTTCCGATTCTCTGTTGG+AGG 0.437637 1_4:+58369044 Msa0173150:CDS
TCCTTTGGTGTAGCCCCTGC+AGG 0.441469 1_4:-58371359 None:intergenic
CATTACATCTCCTAATTGAC+CGG 0.444442 1_4:-58371234 None:intergenic
GCTGCTCATTTAACAAATAA+CGG 0.445307 1_4:-58366544 None:intergenic
ACTACATTGGGATCAGAGTC+TGG 0.445698 1_4:-58362785 None:intergenic
GGATCCGCCCATTGCAGTCC+AGG 0.446975 1_4:-58371150 None:intergenic
CAAAGATGATGACATCATAA+AGG 0.451957 1_4:+58363414 Msa0173150:CDS
TTTGTTAAATGAGCAGCTTA+AGG 0.452656 1_4:+58366550 Msa0173150:CDS
TTTAACCGTCTTCATGAAGT+TGG 0.454685 1_4:+58362860 Msa0173150:CDS
GGAAGATTCTTCCCATTGGC+GGG 0.455433 1_4:+58371486 Msa0173150:CDS
GGGCATCGTCGAACATATAT+AGG 0.456607 1_4:+58369181 Msa0173150:CDS
TTTCTCCCGTAGTATATCTC+TGG 0.456893 1_4:-58371288 None:intergenic
GGACTTGCCTGGACTGCAAT+GGG 0.458484 1_4:+58371143 Msa0173150:CDS
ATGCGCTCTGCATGGAAGAC+AGG 0.461919 1_4:-58371089 None:intergenic
TCGGAAGAACTTACGGTTCA+AGG 0.462402 1_4:-58369030 None:intergenic
CCAACAGTGAGGTAATCTTC+AGG 0.462835 1_4:-58361306 None:intergenic
GGTTTCTGACTCCTGATTCT+CGG 0.463551 1_4:-58370103 None:intergenic
AGTCCCATAACAACGCCAAT+AGG 0.466901 1_4:-58371125 None:intergenic
TCAACCAGTCCAAGTAGTTA+CGG 0.467423 1_4:-58367619 None:intergenic
ATCAATCAATACAAGAGGAT+TGG 0.467735 1_4:-58369251 None:intergenic
CACATGATCGGGTCCGTCGC+CGG 0.469622 1_4:-58361205 None:intergenic
ATTCAGTTCCGCGACAAGAA+AGG 0.470383 1_4:+58360763 Msa0173150:five_prime_UTR
GTGAGGTAATCTTCAGGTCT+GGG 0.470829 1_4:-58361300 None:intergenic
AGAAAATTAGCATTCTGCTC+GGG 0.472974 1_4:-58369541 None:intergenic
TTTCACCTCCATGTTCCTGC+AGG 0.474314 1_4:+58371344 Msa0173150:CDS
ACGTCTGCGCATAACAGATA+TGG 0.474819 1_4:+58363052 Msa0173150:CDS
AAGATATTTAGAGAATTGAA+TGG 0.477254 1_4:-58360952 None:intergenic
AGCTGATGTGGCTGAAATCA+AGG 0.477589 1_4:+58369070 Msa0173150:CDS
ATCTTCAGGTCTGGGATAAG+TGG 0.477893 1_4:-58361292 None:intergenic
ATGGAGGTGAAACTTTGTAT+TGG 0.479069 1_4:-58371333 None:intergenic
CAGAGAATCGGAAGAACTTA+CGG 0.479231 1_4:-58369037 None:intergenic
GGAGGAAGGCACCAGCATAA+GGG 0.480370 1_4:-58362751 None:intergenic
CGCAAAGCTACAGCTGTTGG+AGG 0.483633 1_4:+58367571 Msa0173150:CDS
TTAACCGTCTTCATGAAGTT+GGG 0.483727 1_4:+58362861 Msa0173150:CDS
TTCATCTTGTCCCGTGTTCA+GGG 0.483981 1_4:+58372116 Msa0173150:three_prime_UTR
TTCACCTCCATGTTCCTGCA+GGG 0.487052 1_4:+58371345 Msa0173150:CDS
CAACCAGTCCAAGTAGTTAC+GGG 0.489175 1_4:-58367618 None:intergenic
GATGAAATGAGCTTCAACAT+TGG 0.489422 1_4:-58361024 None:intergenic
CTATTTGCAGGAATTGGGAC+TGG 0.490136 1_4:+58367082 Msa0173150:intron
GTGAACGTGTGAATTGAATT+GGG 0.490666 1_4:-58360988 None:intergenic
TATTGGAATTCATAGCTGTT+GGG 0.491082 1_4:+58368159 Msa0173150:CDS
CTTGAAGAAGCCTGTGAAGA+AGG 0.492602 1_4:+58371430 Msa0173150:CDS
TCTTTCTGGTCCACCAGGCG+TGG 0.492953 1_4:+58368974 Msa0173150:CDS
ATCTGTCTTTCTGGTCCACC+AGG 0.496614 1_4:+58368969 Msa0173150:CDS
GGAGATGCGGAGTCGGATGC+CGG 0.497275 1_4:-58361093 None:intergenic
TACCAGATTTCAAGTATCCA+TGG 0.498537 1_4:+58363002 Msa0173150:intron
AAGAAGGATCTAGCAATGAC+TGG 0.500187 1_4:+58371446 Msa0173150:CDS
AAGTTCTTCCGATTCTCTGT+TGG 0.500807 1_4:+58369041 Msa0173150:CDS
GCAGACGTCGATGACCAATC+AGG 0.501261 1_4:-58363037 None:intergenic
TTCAGCATCAACCACATGAT+CGG 0.501309 1_4:-58361217 None:intergenic
GCTCCAAAATCTGCTAGCCT+TGG 0.502465 1_4:-58366112 None:intergenic
TTTCAGGTAAATTCAGGGAA+AGG 0.503118 1_4:+58367489 Msa0173150:intron
GATCGACAAGCCCCTTATGC+TGG 0.504477 1_4:+58362740 Msa0173150:CDS
GAGAACCGGAACCGCGGCGG+GGG 0.505635 1_4:-58361067 None:intergenic
GGGACTTGCCTGGACTGCAA+TGG 0.506970 1_4:+58371142 Msa0173150:CDS
ATTGCTAGATCCTTCTTCAC+AGG 0.508073 1_4:-58371440 None:intergenic
ACTCGCAAAGCTACAGCTGT+TGG 0.510817 1_4:+58367568 Msa0173150:CDS
GCGTTGTTATGGGACTTGCC+TGG 0.510909 1_4:+58371132 Msa0173150:CDS
CTAATCCTCCAACAGAGAAT+CGG 0.510914 1_4:-58369049 None:intergenic
GTGGCGATAACCACCATTGA+TGG 0.511996 1_4:-58360920 None:intergenic
GTTGAACAAGGGGACGGAAA+AGG 0.512423 1_4:+58371197 Msa0173150:CDS
TTCAATTGATAGTTGGGCAA+AGG 0.515247 1_4:+58369475 Msa0173150:intron
GGGGATCAAGTGATCCTGAT+TGG 0.515553 1_4:+58363023 Msa0173150:CDS
AGATATTTAGAGAATTGAAT+GGG 0.516776 1_4:-58360951 None:intergenic
GTAGGTTACAAAAGAAAGAG+AGG 0.517536 1_4:+58370989 Msa0173150:intron
AGGTGCTATGCCAGGAAAGA+TGG 0.518171 1_4:+58369201 Msa0173150:CDS
CGATGGGAACATCAAGATAG+TGG 0.518244 1_4:-58369567 None:intergenic
ATGTAAAATCCTGGGAAAAG+AGG 0.521237 1_4:-58362391 None:intergenic
TCAGCATCAACCACATGATC+GGG 0.521329 1_4:-58361216 None:intergenic
TCAGAGCTAGATACTACATT+GGG 0.523442 1_4:-58362797 None:intergenic
AAATCCCCTATTGGATAGGA+TGG 0.523871 1_4:+58369794 Msa0173150:CDS
ATATTGGAATTCATAGCTGT+TGG 0.524360 1_4:+58368158 Msa0173150:CDS
CGATAAATCTACAGATATTG+AGG 0.524661 1_4:+58370572 Msa0173150:CDS
TCGGAGAACCGGAACCGCGG+CGG 0.525377 1_4:-58361070 None:intergenic
TCGAGGTCATATCAACACTA+AGG 0.526191 1_4:+58363446 Msa0173150:CDS
TCACAGGCTTCTTCAAGGCA+AGG 0.527647 1_4:-58371424 None:intergenic
TTTCAACATACCCCGCCAAT+GGG 0.528178 1_4:-58371497 None:intergenic
GCAATTGAAGAAAAGATAAG+TGG 0.530216 1_4:+58366512 Msa0173150:CDS
ATTGAAACTTACACTCGAGT+TGG 0.530852 1_4:+58366358 Msa0173150:CDS
CTAGCACCTAATGTAAAAGA+AGG 0.533550 1_4:+58371895 Msa0173150:CDS
AGCTGAGGAAACTCCGTCAA+AGG 0.534058 1_4:+58361248 Msa0173150:CDS
GTGTAGCCCCTGCAGGAACA+TGG 0.534094 1_4:-58371352 None:intergenic
TCACATCAGTTAATCCGTAA+TGG 0.534207 1_4:-58368127 None:intergenic
GGAGAACCGGAACCGCGGCG+GGG 0.537227 1_4:-58361068 None:intergenic
TGGAGGTTGTTACTATTGCT+GGG 0.538931 1_4:+58369814 Msa0173150:CDS
CATAAAGGCCACATCTTTCG+AGG 0.539389 1_4:+58363429 Msa0173150:CDS
GGGAAGATTCTTCCCATTGG+CGG 0.539390 1_4:+58371485 Msa0173150:CDS
TCCTTATTTGCAGGTTAGCG+AGG 0.540613 1_4:+58363228 Msa0173150:intron
ACACAGAGAGATTGATCTGC+CGG 0.541557 1_4:-58370546 None:intergenic
CAGAAAATTAGCATTCTGCT+CGG 0.543929 1_4:-58369542 None:intergenic
CCAAAGGATGGACCAAGTGC+TGG 0.544861 1_4:+58371374 Msa0173150:CDS
ACCAACCTTCGATAGATCGA+TGG 0.546134 1_4:-58369584 None:intergenic
GGATAGACGAGGGTTTATGA+AGG 0.547445 1_4:+58360832 Msa0173150:five_prime_UTR
GAGAAGTAAATCACTAATGC+CGG 0.548477 1_4:+58371994 Msa0173150:exon
AAGAAGCGGAGATGCGGAGT+CGG 0.548637 1_4:-58361100 None:intergenic
TATTGGCCGTTCAATTGCAC+GGG 0.548721 1_4:+58369007 Msa0173150:CDS
GGTACAATGCCTTAAGAATG+TGG 0.549700 1_4:+58369222 Msa0173150:CDS
AAATCTCTCTTATTTGCCGA+AGG 0.551137 1_4:-58371865 None:intergenic
CACAGGCTTCTTCAAGGCAA+GGG 0.551692 1_4:-58371423 None:intergenic
ACAGGGAAGATTCTTCCCAT+TGG 0.553268 1_4:+58371482 Msa0173150:CDS
CTTTCTGGTCCACCAGGCGT+GGG 0.553340 1_4:+58368975 Msa0173150:CDS
ACCAGATTTCAAGTATCCAT+GGG 0.554863 1_4:+58363003 Msa0173150:intron
CAAAGCACTTGCTGGATCAC+CGG 0.556600 1_4:-58369503 None:intergenic
CTGGGGAAGTGACACTTACA+GGG 0.558048 1_4:+58371465 Msa0173150:CDS
AACTCTAAGAAGCGGAGATG+CGG 0.558089 1_4:-58361106 None:intergenic
GAGGAAGGCACCAGCATAAG+GGG 0.562567 1_4:-58362750 None:intergenic
CAATTGCCAGAGATATACTA+CGG 0.563266 1_4:+58371282 Msa0173150:CDS
GTCATCGTGCAACCAGCACT+TGG 0.567012 1_4:-58371386 None:intergenic
TCACCTCCATGTTCCTGCAG+GGG 0.567880 1_4:+58371346 Msa0173150:CDS
TGAAGCATGTGGAATAAAGC+CGG 0.570845 1_4:+58369893 Msa0173150:CDS
GAAAATTAGCATTCTGCTCG+GGG 0.572122 1_4:-58369540 None:intergenic
GCAGCTTAAGGCCATAAAGA+AGG 0.572516 1_4:+58366562 Msa0173150:CDS
TCCTGCAGGGGCTACACCAA+AGG 0.573234 1_4:+58371358 Msa0173150:CDS
GACTAAATCTGTTGAACAAG+GGG 0.573898 1_4:+58371187 Msa0173150:CDS
CGAGTTGGTAAAGAAAGAGA+TGG 0.574235 1_4:+58366373 Msa0173150:CDS
TGGTTGACTGCACTGCCTTG+GGG 0.574302 1_4:+58367635 Msa0173150:CDS
GATAGACGAGGGTTTATGAA+GGG 0.574654 1_4:+58360833 Msa0173150:five_prime_UTR
ATTTCATCAATCAATACAAG+AGG 0.574893 1_4:-58369256 None:intergenic
CGGAGTCATCGTTATTTGGG+AGG 0.577310 1_4:+58361153 Msa0173150:CDS
GAGCTTCAACATTGGATTAG+GGG 0.578639 1_4:-58361016 None:intergenic
CTTGCCTGGACTGCAATGGG+CGG 0.579469 1_4:+58371146 Msa0173150:CDS
GTATTGGCCGTTCAATTGCA+CGG 0.579673 1_4:+58369006 Msa0173150:CDS
TGGCTCATCTTTAAGGAGGA+AGG 0.579983 1_4:-58362765 None:intergenic
ACATATATAGGTGCTATGCC+AGG 0.581505 1_4:+58369193 Msa0173150:CDS
AGAAAACTATTGCTGCAAGA+AGG 0.583435 1_4:+58371818 Msa0173150:CDS
TTCGCTTCCACCATCAATGG+TGG 0.583472 1_4:+58360910 Msa0173150:five_prime_UTR
TCAAGGCCCGTGCAATTGAA+CGG 0.585038 1_4:-58369013 None:intergenic
AAATTGGCATGTAAAATCCT+GGG 0.585606 1_4:-58362399 None:intergenic
AGAAGGATCTAGCAATGACT+GGG 0.587164 1_4:+58371447 Msa0173150:CDS
TTACCCGTAACTACTTGGAC+TGG 0.587817 1_4:+58367615 Msa0173150:CDS
ATAGCTGTTGGGAAATTGAG+AGG 0.587899 1_4:+58368170 Msa0173150:CDS
TGTTGGAGGATTAGCTGATG+TGG 0.590169 1_4:+58369058 Msa0173150:CDS
TGCTGAAGCTAAAGCAGCTG+AGG 0.591116 1_4:+58361233 Msa0173150:CDS
GGAGTCATCGTTATTTGGGA+GGG 0.592287 1_4:+58361154 Msa0173150:CDS
ATAACTTGTAACACATGAGG+TGG 0.593186 1_4:-58367536 None:intergenic
CCCAGCTCAATAGAAAATCC+CGG 0.594026 1_4:-58372034 None:intergenic
CGAGGTCATATCAACACTAA+GGG 0.595033 1_4:+58363447 Msa0173150:CDS
AAAGGAGCATTGCATATCAC+CGG 0.595784 1_4:+58371215 Msa0173150:CDS
GATCAAAGATGCGCTCTGCA+TGG 0.595860 1_4:-58371097 None:intergenic
GAATTCAAAACTCTAAGAAG+CGG 0.598158 1_4:-58361114 None:intergenic
TAGCTGTTGGGAAATTGAGA+GGG 0.598517 1_4:+58368171 Msa0173150:CDS
TCAGGATCACTTGATCCCCA+TGG 0.598561 1_4:-58363019 None:intergenic
TTACGGATTAACTGATGTGA+AGG 0.600376 1_4:+58368130 Msa0173150:CDS
TCGGAGTCGGAATCCGGCGA+CGG 0.603037 1_4:+58361192 Msa0173150:CDS
GGTTCATCTCAAGATCCTAC+CGG 0.603109 1_4:-58372013 None:intergenic
CCAACCTTCGATAGATCGAT+GGG 0.604425 1_4:-58369583 None:intergenic
GAAGATTCTTCCCATTGGCG+GGG 0.605198 1_4:+58371487 Msa0173150:CDS
ATATAATACAAAACTCAGAC+CGG 0.605595 1_4:-58372059 None:intergenic
TGAATCGAAGACTGTTGAGA+AGG 0.606498 1_4:+58371025 Msa0173150:CDS
GGTTAAGCGGTGGATGCAAG+AGG 0.609761 1_4:-58361046 None:intergenic
GCGATAACCACCATTGATGG+TGG 0.609948 1_4:-58360917 None:intergenic
ATTCTCTCAGCGGATTGAGT+CGG 0.610901 1_4:+58361133 Msa0173150:CDS
GTCAGAGCTAGATACTACAT+TGG 0.612372 1_4:-58362798 None:intergenic
TACCAAATCCCCTATTGGAT+AGG 0.612747 1_4:+58369790 Msa0173150:CDS
GAGACTAAATCTGTTGAACA+AGG 0.612839 1_4:+58371185 Msa0173150:CDS
CGGCGACGGACCCGATCATG+TGG 0.613445 1_4:+58361206 Msa0173150:CDS
GCAGGGGCTACACCAAAGGA+TGG 0.614871 1_4:+58371362 Msa0173150:CDS
TGATGGTGGAAGCGAAGCGG+AGG 0.615181 1_4:-58360903 None:intergenic
AAAAGAGGTCTATGTTGCAA+CGG 0.615327 1_4:-58362376 None:intergenic
TTGCTACTCTCTATCAACAC+GGG 0.615994 1_4:-58370471 None:intergenic
TGTTTGCACTGCAAATGTAG+TGG 0.616187 1_4:+58369761 Msa0173150:CDS
GAGTCCCAACTTCATGAAGA+CGG 0.618939 1_4:-58362865 None:intergenic
ACCTCCATCCTATCCAATAG+GGG 0.626225 1_4:-58369798 None:intergenic
GTACAATGCCTTAAGAATGT+GGG 0.627193 1_4:+58369223 Msa0173150:CDS
TTGGTCATTTGGATAGACGA+GGG 0.627325 1_4:+58360822 Msa0173150:five_prime_UTR
GGCAAGGGACAACATAGAAG+TGG 0.633373 1_4:-58371408 None:intergenic
ATGCGGAGTCGGATGCCGGT+CGG 0.634475 1_4:-58361089 None:intergenic
TAGTTGGGCAAAGGACATGC+CGG 0.635078 1_4:+58369484 Msa0173150:intron
AAGCGGAGGAAGAAGAAGAG+TGG 0.636088 1_4:-58360889 None:intergenic
TCCCCTATTGGATAGGATGG+AGG 0.636687 1_4:+58369797 Msa0173150:CDS
TGTTCCCATCGATCTATCGA+AGG 0.639058 1_4:+58369579 Msa0173150:CDS
AAAACTACACGTGAAGCATG+TGG 0.641017 1_4:+58369882 Msa0173150:CDS
TGAGATGAACACAAATCCAC+CGG 0.643292 1_4:+58370527 Msa0173150:CDS
AAATTGAGAGGGACTTCACA+AGG 0.643864 1_4:+58368182 Msa0173150:CDS
AAATCTGTTGAACAAGGGGA+CGG 0.651170 1_4:+58371191 Msa0173150:CDS
AGTAAATCACTAATGCCGGT+AGG 0.651252 1_4:+58371998 Msa0173150:exon
AGACTAAATCTGTTGAACAA+GGG 0.652455 1_4:+58371186 Msa0173150:CDS
TATTGCTGCAAGAAGGAGTG+AGG 0.652496 1_4:+58371825 Msa0173150:CDS
TTTGGTCATTTGGATAGACG+AGG 0.653553 1_4:+58360821 Msa0173150:five_prime_UTR
GTAAAGCTGCCAATAGTTTG+GGG 0.653963 1_4:-58362706 None:intergenic
TCTATAACTTGTAACACATG+AGG 0.655916 1_4:-58367539 None:intergenic
TTTAGTCTCTATATACAGTG+TGG 0.656615 1_4:-58371171 None:intergenic
CGGTCGGAGAACCGGAACCG+CGG 0.661798 1_4:-58361073 None:intergenic
TAACTTGTAACACATGAGGT+GGG 0.663798 1_4:-58367535 None:intergenic
ATTGCTACTCTCTATCAACA+CGG 0.665388 1_4:-58370472 None:intergenic
AATTGCCAGAGATATACTAC+GGG 0.666821 1_4:+58371283 Msa0173150:CDS
AGATAGCGCTACGACTTGTG+AGG 0.667785 1_4:+58370358 Msa0173150:intron
CATTGATGGTGGAAGCGAAG+CGG 0.670697 1_4:-58360906 None:intergenic
CAGAGAGATTGATCTGCCGG+TGG 0.680139 1_4:-58370543 None:intergenic
AGTCTGGCTCATCTTTAAGG+AGG 0.681007 1_4:-58362769 None:intergenic
GTAGGATCTTGAGATGAACC+GGG 0.681710 1_4:+58372016 Msa0173150:three_prime_UTR
ACAAACCTGTATTCACCCCA+AGG 0.685382 1_4:-58367650 None:intergenic
TGATATGACCTCGAAAGATG+TGG 0.692394 1_4:-58363437 None:intergenic
TGCTACTCTCTATCAACACG+GGG 0.697572 1_4:-58370470 None:intergenic
GCTACGACTTGTGAGGCACG+TGG 0.709175 1_4:+58370365 Msa0173150:CDS
CCAGATTTCAAGTATCCATG+GGG 0.727231 1_4:+58363004 Msa0173150:intron
GAAGGATCTAGCAATGACTG+GGG 0.732838 1_4:+58371448 Msa0173150:CDS
TAGCCCCTGCAGGAACATGG+AGG 0.733655 1_4:-58371349 None:intergenic
TGTGTTACAAGTTATAGACG+AGG 0.751251 1_4:+58367544 Msa0173150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTTTTTAATTTA+TGG + chr1_4:58371528-58371547 Msa0173150:intron 0.0%
!! AAAAAAAATTATTATTCTTG+TGG + chr1_4:58361806-58361825 Msa0173150:intron 10.0%
!! TGCTAAAATTAATTAAAAAA+TGG + chr1_4:58363088-58363107 Msa0173150:intron 10.0%
!! TTTATTTATTCTTAAACAAA+CGG + chr1_4:58364968-58364987 Msa0173150:intron 10.0%
!!! TTTAATAAGAGTATTTTATA+TGG + chr1_4:58365626-58365645 Msa0173150:intron 10.0%
!!! TTAATAAGAGTATTTTATAT+GGG + chr1_4:58365627-58365646 Msa0173150:intron 10.0%
!! ATATATAGAGAAAAAAAATT+GGG - chr1_4:58368417-58368436 None:intergenic 10.0%
!! TATATATAGAGAAAAAAAAT+TGG - chr1_4:58368418-58368437 None:intergenic 10.0%
!! ATAAAATTATAAATGTTCAA+TGG + chr1_4:58368435-58368454 Msa0173150:intron 10.0%
!!! TGAATTTTAAATAAATGAAT+TGG - chr1_4:58368873-58368892 None:intergenic 10.0%
!! TAAAATTTCTAATAAACAAA+TGG - chr1_4:58371673-58371692 None:intergenic 10.0%
!!! TTTTAATTTGATTGGAAAAT+GGG + chr1_4:58361416-58361435 Msa0173150:intron 15.0%
!!! GTGTTTTTTATTATAGATAT+AGG + chr1_4:58361495-58361514 Msa0173150:intron 15.0%
!!! TTTTCGATAAAATTATAATC+AGG - chr1_4:58362249-58362268 None:intergenic 15.0%
!! AAAAGTCAATAAAAGATAAA+AGG - chr1_4:58363366-58363385 None:intergenic 15.0%
!! ATTCAGAAACTAAAAATTAA+AGG - chr1_4:58363665-58363684 None:intergenic 15.0%
!! ATCCGTTTAAAAAAAAAAAA+GGG - chr1_4:58363816-58363835 None:intergenic 15.0%
!!! TCAAGATATCTTAATTTTTA+AGG - chr1_4:58363855-58363874 None:intergenic 15.0%
!! TTATTTATTCTTAAACAAAC+GGG + chr1_4:58364969-58364988 Msa0173150:intron 15.0%
!! CTTGTATTAACATATATAAT+AGG - chr1_4:58365299-58365318 None:intergenic 15.0%
!! ATTATATATGTTAATACAAG+AGG + chr1_4:58365299-58365318 Msa0173150:intron 15.0%
!! TTATATATGTTAATACAAGA+GGG + chr1_4:58365300-58365319 Msa0173150:intron 15.0%
!!! TAAGAAAAAATTGACTTTTT+AGG - chr1_4:58365960-58365979 None:intergenic 15.0%
!!! GTCAATTTTTTCTTATAATA+AGG + chr1_4:58365965-58365984 Msa0173150:intron 15.0%
!!! TTTGAATTTTTTCTATATGT+GGG + chr1_4:58366740-58366759 Msa0173150:intron 15.0%
!!! GTTATAATCTTTTTTTAAGA+TGG + chr1_4:58367136-58367155 Msa0173150:intron 15.0%
!! AAAAAAAATAAAAACCAGTT+AGG - chr1_4:58367292-58367311 None:intergenic 15.0%
!!! TAACTGGTTTTTATTTTTTT+TGG + chr1_4:58367291-58367310 Msa0173150:intron 15.0%
!!! TTAACTATACTTTTTATTTC+AGG + chr1_4:58367473-58367492 Msa0173150:intron 15.0%
!! ATAGCAATTTAATATATTAC+AGG + chr1_4:58368528-58368547 Msa0173150:intron 15.0%
!!! TTATAATGACTGAATTTTAA+AGG - chr1_4:58368783-58368802 None:intergenic 15.0%
!!! TCATTAATATTGAATTTTAC+AGG + chr1_4:58369159-58369178 Msa0173150:intron 15.0%
!!! CATTAATATTGAATTTTACA+GGG + chr1_4:58369160-58369179 Msa0173150:intron 15.0%
!!! ATTAATATTGAATTTTACAG+GGG + chr1_4:58369161-58369180 Msa0173150:intron 15.0%
!! ATTCATGCATTATATTTATT+AGG - chr1_4:58369372-58369391 None:intergenic 15.0%
!! CGTAAAAAATTTAACAAAAT+TGG - chr1_4:58369396-58369415 None:intergenic 15.0%
!! ATATTTATGTATGTTAATGT+TGG + chr1_4:58370967-58370986 Msa0173150:intron 15.0%
!! AATAAACAAATGGTATTTAT+TGG - chr1_4:58371663-58371682 None:intergenic 15.0%
!!! TTAAGATAAATTTTACAACT+GGG - chr1_4:58372176-58372195 None:intergenic 15.0%
!!! ATTAAGATAAATTTTACAAC+TGG - chr1_4:58372177-58372196 None:intergenic 15.0%
!! TCAAATAAATAAAACATGTT+TGG - chr1_4:58372222-58372241 None:intergenic 15.0%
!! AGATATTTAGAGAATTGAAT+GGG - chr1_4:58360954-58360973 None:intergenic 20.0%
!! AAGATATTTAGAGAATTGAA+TGG - chr1_4:58360955-58360974 None:intergenic 20.0%
!!! ATGTTACGTTTTAATTTGAT+TGG + chr1_4:58361408-58361427 Msa0173150:intron 20.0%
!!! GTTTTAATTTGATTGGAAAA+TGG + chr1_4:58361415-58361434 Msa0173150:intron 20.0%
!!! TTTAATTTGATTGGAAAATG+GGG + chr1_4:58361417-58361436 Msa0173150:intron 20.0%
!! TTGTTAAATAGTAGTTATAG+TGG + chr1_4:58361622-58361641 Msa0173150:intron 20.0%
!! AATAATAAATACTTGGTTGT+AGG - chr1_4:58361773-58361792 None:intergenic 20.0%
!! AGGAAAGAATAATAAATACT+TGG - chr1_4:58361780-58361799 None:intergenic 20.0%
!!! TCTATTGATAATATAATCAG+AGG - chr1_4:58362166-58362185 None:intergenic 20.0%
!! AAGGAGAAAAAATAATCATT+AGG - chr1_4:58362331-58362350 None:intergenic 20.0%
!!! AAGAGTGTATATGATTTAAA+AGG + chr1_4:58362827-58362846 Msa0173150:CDS 20.0%
!!! AATGGTGTTTGATAATATTT+TGG + chr1_4:58363106-58363125 Msa0173150:intron 20.0%
!!! ATCTTTTATTGACTTTTACT+TGG + chr1_4:58363369-58363388 Msa0173150:intron 20.0%
!!! GACCCTTTTTTTTTTTTAAA+CGG + chr1_4:58363811-58363830 Msa0173150:intron 20.0%
!! GATCCGTTTAAAAAAAAAAA+AGG - chr1_4:58363817-58363836 None:intergenic 20.0%
!! TATTGTTATGGGAAAATTAA+CGG - chr1_4:58363998-58364017 None:intergenic 20.0%
!! AAACTAAAGTAAAAAGGTAA+GGG - chr1_4:58364047-58364066 None:intergenic 20.0%
!! AAAACTAAAGTAAAAAGGTA+AGG - chr1_4:58364048-58364067 None:intergenic 20.0%
!!! TTACCTTTTTACTTTAGTTT+TGG + chr1_4:58364047-58364066 Msa0173150:intron 20.0%
!! ATATTTAAACTGTGTAACTT+GGG - chr1_4:58364300-58364319 None:intergenic 20.0%
!! TTACACAGTTTAAATATCTT+GGG + chr1_4:58364303-58364322 Msa0173150:intron 20.0%
!! GCCCAAAAAAAATAAAAAAT+GGG + chr1_4:58365102-58365121 Msa0173150:intron 20.0%
!!! GCCCATTTTTTATTTTTTTT+GGG - chr1_4:58365106-58365125 None:intergenic 20.0%
!! ACATCAATGAATTTATTTGT+AGG + chr1_4:58365596-58365615 Msa0173150:intron 20.0%
!!! GTCAATTGTTTCTTATAATA+AGG - chr1_4:58365866-58365885 None:intergenic 20.0%
!!! TAAGAAACAATTGACTTTTT+TGG + chr1_4:58365871-58365890 Msa0173150:intron 20.0%
!!! TTTTTTCTTATAATAAGGAC+CGG + chr1_4:58365970-58365989 Msa0173150:intron 20.0%
!!! ACTTCTAAAATTCAAAAAGT+TGG + chr1_4:58366662-58366681 Msa0173150:intron 20.0%
!!! GTTTGAATTTTTTCTATATG+TGG + chr1_4:58366739-58366758 Msa0173150:intron 20.0%
!!! ATAATCTTTTTTTAAGATGG+TGG + chr1_4:58367139-58367158 Msa0173150:intron 20.0%
!!! TTTTTATTTCAGGTAAATTC+AGG + chr1_4:58367483-58367502 Msa0173150:intron 20.0%
!!! TTTTATTTCAGGTAAATTCA+GGG + chr1_4:58367484-58367503 Msa0173150:intron 20.0%
!!! TGAATTTTGGACAAAATAAT+AGG - chr1_4:58368588-58368607 None:intergenic 20.0%
!!! TTATTTAAAATTCAAGCCTT+TGG + chr1_4:58368879-58368898 Msa0173150:intron 20.0%
!! TGTAGAATATTTATGAGATT+AGG - chr1_4:58369422-58369441 None:intergenic 20.0%
!! CTCATAAATATTCTACATAA+AGG + chr1_4:58369425-58369444 Msa0173150:intron 20.0%
!!! TGTTTTATTCAATTGATAGT+TGG + chr1_4:58369468-58369487 Msa0173150:intron 20.0%
!!! GTTTTATTCAATTGATAGTT+GGG + chr1_4:58369469-58369488 Msa0173150:intron 20.0%
!! TACTAATTTCAAGCATTAAT+GGG + chr1_4:58370685-58370704 Msa0173150:intron 20.0%
!!! TCAAATTTGTTAATCATTAG+CGG - chr1_4:58370948-58370967 None:intergenic 20.0%
!!! TTTTAAAGTTATTTCTGAGT+TGG + chr1_4:58371611-58371630 Msa0173150:intron 20.0%
!!! ATTAGAAATTTTAGTCATGT+AGG + chr1_4:58371680-58371699 Msa0173150:intron 20.0%
!!! TGAATAATAATCAGTTTGTT+GGG - chr1_4:58371714-58371733 None:intergenic 20.0%
!! ATGAATAATAATCAGTTTGT+TGG - chr1_4:58371715-58371734 None:intergenic 20.0%
!! AAAAGAAATCATGACAATAT+GGG - chr1_4:58371743-58371762 None:intergenic 20.0%
!! AAAAAGAAATCATGACAATA+TGG - chr1_4:58371744-58371763 None:intergenic 20.0%
!! TAAGACTATAATATTTCCTT+CGG + chr1_4:58371849-58371868 Msa0173150:CDS 20.0%
!!! TTGATGTTATATTTTTGCTA+AGG + chr1_4:58372238-58372257 Msa0173150:three_prime_UTR 20.0%
! TGGATAAGCAACAAATTTAA+AGG - chr1_4:58361880-58361899 None:intergenic 25.0%
! ATAGAAACTACTATTCTCAT+TGG - chr1_4:58361900-58361919 None:intergenic 25.0%
! AACAAAACTAACTAACTATC+CGG - chr1_4:58361941-58361960 None:intergenic 25.0%
! TCGATAAAATTATAATCAGG+AGG - chr1_4:58362246-58362265 None:intergenic 25.0%
!!! TTATTTTTTCTCCTTTCTGT+TGG + chr1_4:58362336-58362355 Msa0173150:intron 25.0%
!! TTACATGCCAATTTTTGTTA+AGG + chr1_4:58362408-58362427 Msa0173150:CDS 25.0%
!! CTAAACAAGTAATTTGTAGA+AGG - chr1_4:58362938-58362957 None:intergenic 25.0%
! AGGATTATTGACAAAAAGTT+AGG - chr1_4:58362974-58362993 None:intergenic 25.0%
! ACAAAACTCAAACACAAATA+TGG - chr1_4:58363140-58363159 None:intergenic 25.0%
!!! TGTGTTTGAGTTTTGTTTAT+AGG + chr1_4:58363144-58363163 Msa0173150:intron 25.0%
!!! GTGTTTGAGTTTTGTTTATA+GGG + chr1_4:58363145-58363164 Msa0173150:intron 25.0%
! TTCAATGAGAATACAAAATG+AGG - chr1_4:58363307-58363326 None:intergenic 25.0%
!! ATTTTGTATTCTCATTGAAG+TGG + chr1_4:58363308-58363327 Msa0173150:intron 25.0%
! TTCTTAAAACAAGTTCTCTT+TGG + chr1_4:58363473-58363492 Msa0173150:CDS 25.0%
! CAGAAACTAAAAATTAAAGG+TGG - chr1_4:58363662-58363681 None:intergenic 25.0%
! TTCTTATATTAGAGCTATCA+AGG + chr1_4:58363924-58363943 Msa0173150:intron 25.0%
!! GTTAATTTTCCCATAACAAT+AGG + chr1_4:58363997-58364016 Msa0173150:intron 25.0%
! CATCCAAAACTAAAGTAAAA+AGG - chr1_4:58364053-58364072 None:intergenic 25.0%
! TATTTAAACTGTGTAACTTG+GGG - chr1_4:58364299-58364318 None:intergenic 25.0%
! GATATTTAAACTGTGTAACT+TGG - chr1_4:58364301-58364320 None:intergenic 25.0%
! GTTACACAGTTTAAATATCT+TGG + chr1_4:58364302-58364321 Msa0173150:intron 25.0%
! CTTATCACATAAAACATATG+AGG - chr1_4:58364406-58364425 None:intergenic 25.0%
! TAGAAAAGATGGTAGAAAAT+AGG + chr1_4:58364641-58364660 Msa0173150:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG - chr1_4:58364772-58364791 None:intergenic 25.0%
! AACTATCAAGAATGATTTAG+AGG + chr1_4:58364789-58364808 Msa0173150:intron 25.0%
! GGCCCAAAAAAAATAAAAAA+TGG + chr1_4:58365101-58365120 Msa0173150:intron 25.0%
!!! GGCCCATTTTTTATTTTTTT+TGG - chr1_4:58365107-58365126 None:intergenic 25.0%
!!! AGTGTTGTTTTATGAAGTAA+AGG + chr1_4:58365370-58365389 Msa0173150:intron 25.0%
! CTTTAAATATGAAAGTCTTG+TGG - chr1_4:58365460-58365479 None:intergenic 25.0%
!! CAATTAAAGAGTACAAGAAA+AGG - chr1_4:58365806-58365825 None:intergenic 25.0%
!! TTGTTTCTTATAATAAGGAC+CGG - chr1_4:58365861-58365880 None:intergenic 25.0%
!!! GCACTGAATTTTTTAACATT+TGG + chr1_4:58366297-58366316 Msa0173150:intron 25.0%
!!! CTGAATTTTTTAACATTTGG+AGG + chr1_4:58366300-58366319 Msa0173150:intron 25.0%
! AAGGATATTTACCTTCTTTA+TGG - chr1_4:58366576-58366595 None:intergenic 25.0%
! TTTATCAAACCAAATCATGA+AGG - chr1_4:58366595-58366614 None:intergenic 25.0%
! TAACATAAAGGATTCTACAA+TGG - chr1_4:58366709-58366728 None:intergenic 25.0%
!! TTGAATTTTGTTCTATTTGC+AGG + chr1_4:58367070-58367089 Msa0173150:intron 25.0%
! GGTGAACATATTTAGTAATT+TGG - chr1_4:58367271-58367290 None:intergenic 25.0%
! TATCTTTCAAAACTGTTGTA+TGG + chr1_4:58367354-58367373 Msa0173150:intron 25.0%
!!! ATTTTAGTTGTCAACTTCTA+AGG - chr1_4:58367772-58367791 None:intergenic 25.0%
!! TGCATAAGCATAATTTTCAT+AGG + chr1_4:58367791-58367810 Msa0173150:intron 25.0%
!!! ATTTTAGTTGTCAACTTCTA+AGG - chr1_4:58367772-58367791 None:intergenic 25.0%
!! TGCATAAGCATAATTTTCAT+AGG + chr1_4:58367791-58367810 Msa0173150:intron 25.0%
!!! TAATGACTGAATTTTAAAGG+CGG - chr1_4:58368780-58368799 None:intergenic 25.0%
!! AATAAATGAATTGGCTTATG+AGG - chr1_4:58368864-58368883 None:intergenic 25.0%
! ATTTCATCAATCAATACAAG+AGG - chr1_4:58369259-58369278 None:intergenic 25.0%
! TAGACAGTTCAATTTATTTG+TGG + chr1_4:58369298-58369317 Msa0173150:intron 25.0%
!!! TTTGTTTTCTAATTTCCCTT+TGG + chr1_4:58369330-58369349 Msa0173150:intron 25.0%
! TGCACTGTTTATTTATTACA+TGG + chr1_4:58369646-58369665 Msa0173150:intron 25.0%
! GAAAAGAAAAATACTTGTTC+CGG - chr1_4:58369915-58369934 None:intergenic 25.0%
!!! ATTGCCTTATTGGTTTTAAT+TGG + chr1_4:58369994-58370013 Msa0173150:intron 25.0%
! TCAACCAATTAAAACCAATA+AGG - chr1_4:58370001-58370020 None:intergenic 25.0%
!!! TTGGTTTTAATTGGTTGAAA+AGG + chr1_4:58370003-58370022 Msa0173150:intron 25.0%
!!! TTTTTTCTATGTGCTTTTGA+AGG - chr1_4:58370127-58370146 None:intergenic 25.0%
! AGCACATAGAAAAAATTTAC+CGG + chr1_4:58370132-58370151 Msa0173150:CDS 25.0%
!!! TGAAGAAGATTTTGATGAAA+CGG + chr1_4:58370422-58370441 Msa0173150:CDS 25.0%
!!! ATCAAGTTTAGAGTTTTCAT+CGG - chr1_4:58370508-58370527 None:intergenic 25.0%
! CATTAATGCTTGAAATTAGT+AGG - chr1_4:58370686-58370705 None:intergenic 25.0%
! CTACTAATTTCAAGCATTAA+TGG + chr1_4:58370684-58370703 Msa0173150:intron 25.0%
! CACAAAAAAATGCAACTATA+TGG - chr1_4:58370766-58370785 None:intergenic 25.0%
! TTATGTATGTTAATGTTGGT+AGG + chr1_4:58370971-58370990 Msa0173150:intron 25.0%
!! TCGAATTTAGATGATTTTGT+TGG + chr1_4:58371062-58371081 Msa0173150:CDS 25.0%
! TAAAAAGAAATTCCAGAACT+TGG - chr1_4:58371596-58371615 None:intergenic 25.0%
! ATATAATACAAAACTCAGAC+CGG - chr1_4:58372062-58372081 None:intergenic 25.0%
!!! TGATGATACTCGTTTTTTTT+TGG + chr1_4:58372267-58372286 Msa0173150:three_prime_UTR 25.0%
!!! GTTTTTTTGACAAGCAAGAA+AGG + chr1_4:58360794-58360813 Msa0173150:five_prime_UTR 30.0%
! GAATTCAAAACTCTAAGAAG+CGG - chr1_4:58361117-58361136 None:intergenic 30.0%
!! TGATCCTTTTTCGTTTATGA+AGG + chr1_4:58361384-58361403 Msa0173150:intron 30.0%
CATTCCTTCATAAACGAAAA+AGG - chr1_4:58361391-58361410 None:intergenic 30.0%
! TCAATTTCTTCTAGCAGTTT+TGG - chr1_4:58361561-58361580 None:intergenic 30.0%
TGTAGGATAAAAACTCTATC+TGG - chr1_4:58361756-58361775 None:intergenic 30.0%
CATAGACATATTGTTGAACT+TGG + chr1_4:58362084-58362103 Msa0173150:intron 30.0%
AAATTGGCATGTAAAATCCT+GGG - chr1_4:58362402-58362421 None:intergenic 30.0%
AAAATTGGCATGTAAAATCC+TGG - chr1_4:58362403-58362422 None:intergenic 30.0%
! TGCCAATTTTTGTTAAGGTA+TGG + chr1_4:58362413-58362432 Msa0173150:intron 30.0%
CACCATACCTTAACAAAAAT+TGG - chr1_4:58362418-58362437 None:intergenic 30.0%
TGGCTTAATCATATGTGATT+TGG + chr1_4:58362546-58362565 Msa0173150:intron 30.0%
TTTCCATATGTATGTGTTCA+TGG + chr1_4:58362606-58362625 Msa0173150:intron 30.0%
AATCCATGAACACATACATA+TGG - chr1_4:58362612-58362631 None:intergenic 30.0%
ATATGTATGTGTTCATGGAT+TGG + chr1_4:58362611-58362630 Msa0173150:intron 30.0%
! ATTGGCTTAATCATGTGATT+TGG + chr1_4:58362629-58362648 Msa0173150:intron 30.0%
GCATACAAAATCACATACTT+GGG - chr1_4:58362894-58362913 None:intergenic 30.0%
! CAAGTATGTGATTTTGTATG+CGG + chr1_4:58362893-58362912 Msa0173150:intron 30.0%
! TGAAATCTGGTATTGAAAAC+AGG - chr1_4:58362994-58363013 None:intergenic 30.0%
! TTAACACTTTCCTTATTTGC+AGG + chr1_4:58363219-58363238 Msa0173150:intron 30.0%
! TGATCAACTTTTACAGTAAG+CGG - chr1_4:58363256-58363275 None:intergenic 30.0%
! TGTAAAAGTTGATCACCTTA+AGG + chr1_4:58363261-58363280 Msa0173150:intron 30.0%
ATCAATAAAGACATGCCTTA+AGG - chr1_4:58363279-58363298 None:intergenic 30.0%
CAAAGATGATGACATCATAA+AGG + chr1_4:58363414-58363433 Msa0173150:CDS 30.0%
CAATAAATGCAAGCACAAAA+GGG - chr1_4:58363540-58363559 None:intergenic 30.0%
ATTTATTGGAACATGGGAAT+GGG + chr1_4:58363552-58363571 Msa0173150:intron 30.0%
CACAGCACATAAATAAACAA+AGG - chr1_4:58363596-58363615 None:intergenic 30.0%
!! TTTGTTTTCATTGCTTTGCT+AGG + chr1_4:58363616-58363635 Msa0173150:intron 30.0%
!!! ATTGCTTTGCTAGGATTTTT+TGG + chr1_4:58363625-58363644 Msa0173150:intron 30.0%
TAACATTAGGATTGTATGCA+TGG - chr1_4:58363774-58363793 None:intergenic 30.0%
AAAAAAGGGTCATTATCTCA+AGG - chr1_4:58363802-58363821 None:intergenic 30.0%
!!! TTCTCTGTCATTTTGTACTA+TGG - chr1_4:58364330-58364349 None:intergenic 30.0%
TGTATATCATTGTTCAAGCT+AGG + chr1_4:58364361-58364380 Msa0173150:intron 30.0%
! TCTACCATCTTTTCTACTAT+AGG - chr1_4:58364637-58364656 None:intergenic 30.0%
!!! CTACTTTTTCTTTGCAGAAA+AGG + chr1_4:58364911-58364930 Msa0173150:intron 30.0%
ATAACACACTATAAATCCTG+CGG + chr1_4:58365260-58365279 Msa0173150:intron 30.0%
ATAAAACAACACTTCCTTGA+AGG - chr1_4:58365363-58365382 None:intergenic 30.0%
!! TATGTGGTTGGTATATGTTT+TGG + chr1_4:58366006-58366025 Msa0173150:intron 30.0%
! TAGGTGATTTTACATATCCA+AGG + chr1_4:58366095-58366114 Msa0173150:CDS 30.0%
AAGTTTGTGTGAATTATTGC+AGG + chr1_4:58366475-58366494 Msa0173150:intron 30.0%
GCAATTGAAGAAAAGATAAG+TGG + chr1_4:58366512-58366531 Msa0173150:CDS 30.0%
GCTGCTCATTTAACAAATAA+CGG - chr1_4:58366547-58366566 None:intergenic 30.0%
TTTGTTAAATGAGCAGCTTA+AGG + chr1_4:58366550-58366569 Msa0173150:CDS 30.0%
GGTAAATATCCTTCATGATT+TGG + chr1_4:58366583-58366602 Msa0173150:intron 30.0%
AGGTTCAACACATAGAATTA+GGG - chr1_4:58366860-58366879 None:intergenic 30.0%
ATTATAACTGCACTTGTGTT+AGG - chr1_4:58366973-58366992 None:intergenic 30.0%
! TGCTATACTTGCTAATAAGT+TGG + chr1_4:58367024-58367043 Msa0173150:intron 30.0%
TTTGTTCTATTTGCAGGAAT+TGG + chr1_4:58367076-58367095 Msa0173150:intron 30.0%
TTGTTCTATTTGCAGGAATT+GGG + chr1_4:58367077-58367096 Msa0173150:intron 30.0%
ACTAAATATGTTCACCTAAC+TGG + chr1_4:58367275-58367294 Msa0173150:intron 30.0%
TTGTTTGTGCTTTAGTCTAT+AGG + chr1_4:58367404-58367423 Msa0173150:intron 30.0%
! CTTTAGTCTATAGGTTTTTC+TGG + chr1_4:58367413-58367432 Msa0173150:intron 30.0%
! TCTATAACTTGTAACACATG+AGG - chr1_4:58367542-58367561 None:intergenic 30.0%
ATTCTTGATGAAGACCATTA+TGG + chr1_4:58367915-58367934 Msa0173150:intron 30.0%
CTTCATCAGTTAATCCATAA+TGG - chr1_4:58367932-58367951 None:intergenic 30.0%
AATTAACAGATTCAGACTCA+TGG - chr1_4:58368048-58368067 None:intergenic 30.0%
ATTCTTGATGAAGACCATTA+CGG + chr1_4:58367915-58367934 Msa0173150:intron 30.0%
TGATGTGAAGGAAAGAATAT+TGG + chr1_4:58368142-58368161 Msa0173150:CDS 30.0%
ATATTGGAATTCATAGCTGT+TGG + chr1_4:58368158-58368177 Msa0173150:CDS 30.0%
TATTGGAATTCATAGCTGTT+GGG + chr1_4:58368159-58368178 Msa0173150:CDS 30.0%
TGTGATTAATGTCTACCAAA+TGG + chr1_4:58368325-58368344 Msa0173150:intron 30.0%
ATCGAGATATATGGTGATTT+AGG - chr1_4:58368393-58368412 None:intergenic 30.0%
!!! GTGCTATTGGTTATTTTAAC+TGG + chr1_4:58368482-58368501 Msa0173150:intron 30.0%
!! AATGACTGAATTTTAAAGGC+GGG - chr1_4:58368779-58368798 None:intergenic 30.0%
TCCTGATCTTTCTTATATAC+AGG + chr1_4:58368939-58368958 Msa0173150:intron 30.0%
TCCTGTATATAAGAAAGATC+AGG - chr1_4:58368943-58368962 None:intergenic 30.0%
GGAAAAATTATCTGTCTTTC+TGG + chr1_4:58368960-58368979 Msa0173150:intron 30.0%
ATAAATCTGTTTCCTTCACT+AGG + chr1_4:58369096-58369115 Msa0173150:intron 30.0%
TTGATACCAGTTATATAGTG+TGG + chr1_4:58369124-58369143 Msa0173150:intron 30.0%
ATCAATCAATACAAGAGGAT+TGG - chr1_4:58369254-58369273 None:intergenic 30.0%
GCATTATATTTATTAGGACC+AGG - chr1_4:58369366-58369385 None:intergenic 30.0%
!!! AAGGTTGGTTTTTGATAATC+TGG + chr1_4:58369598-58369617 Msa0173150:intron 30.0%
!!! AGGTTGGTTTTTGATAATCT+GGG + chr1_4:58369599-58369618 Msa0173150:intron 30.0%
!!! ATGTGCCAATTTTGATTTCA+GGG - chr1_4:58369685-58369704 None:intergenic 30.0%
!!! AATGTGCCAATTTTGATTTC+AGG - chr1_4:58369686-58369705 None:intergenic 30.0%
ACCAATAAGGCAATAAAAGA+TGG - chr1_4:58369988-58370007 None:intergenic 30.0%
!! TACACAAATTAACTTGCTAC+AGG + chr1_4:58370034-58370053 Msa0173150:intron 30.0%
CATAGAAAAAATTTACCGGA+AGG + chr1_4:58370136-58370155 Msa0173150:CDS 30.0%
AAAAAATACTACAGACCTTC+CGG - chr1_4:58370154-58370173 None:intergenic 30.0%
! GAGATATGCTATGATTTGTA+TGG + chr1_4:58370209-58370228 Msa0173150:intron 30.0%
GTCCTGAAATATTCTGTTTA+TGG + chr1_4:58370329-58370348 Msa0173150:intron 30.0%
TGCCATAAACAGAATATTTC+AGG - chr1_4:58370334-58370353 None:intergenic 30.0%
AAATCTTCTTCAGCTTTCTT+TGG - chr1_4:58370414-58370433 None:intergenic 30.0%
!! GAAGAAGATTTTGATGAAAC+GGG + chr1_4:58370423-58370442 Msa0173150:CDS 30.0%
GTACTACTACCATTCAAAAA+GGG + chr1_4:58370445-58370464 Msa0173150:CDS 30.0%
CGATAAATCTACAGATATTG+AGG + chr1_4:58370572-58370591 Msa0173150:CDS 30.0%
TTAAGCGGCAAAATATTATG+AGG + chr1_4:58370822-58370841 Msa0173150:intron 30.0%
GTTATTGAAACACAAGATCT+TGG - chr1_4:58370873-58370892 None:intergenic 30.0%
! GGAAAAAATAGTTTGTGTAG+TGG - chr1_4:58370895-58370914 None:intergenic 30.0%
!! AATTTGTTAATCATTAGCGG+TGG - chr1_4:58370945-58370964 None:intergenic 30.0%
AAAAGAAAGAGAGGAAGATA+AGG + chr1_4:58370998-58371017 Msa0173150:CDS 30.0%
ATCTTTGATCAAACACCTAT+TGG + chr1_4:58371110-58371129 Msa0173150:CDS 30.0%
TTTAGTCTCTATATACAGTG+TGG - chr1_4:58371174-58371193 None:intergenic 30.0%
AGACTAAATCTGTTGAACAA+GGG + chr1_4:58371186-58371205 Msa0173150:CDS 30.0%
! TTTTAGTCATGTAGGAACTT+TGG + chr1_4:58371688-58371707 Msa0173150:intron 30.0%
! ATTTCTTTTTGCATTGTGTC+TGG + chr1_4:58371754-58371773 Msa0173150:intron 30.0%
CTATATGCAGATCTTTGATT+TGG + chr1_4:58371942-58371961 Msa0173150:CDS 30.0%
! ATGTTTTTCTCTTTTAAGCC+TGG + chr1_4:58372145-58372164 Msa0173150:three_prime_UTR 30.0%
! CAAATTTTCCTTTCTTGTCG+CGG - chr1_4:58360774-58360793 None:intergenic 35.0%
! ACAAGCAAGAAAGGACATTT+TGG + chr1_4:58360803-58360822 Msa0173150:five_prime_UTR 35.0%
!! GAAAGGACATTTTGGTCATT+TGG + chr1_4:58360811-58360830 Msa0173150:five_prime_UTR 35.0%
!! GAGAATTGAATGGGTTTTGA+CGG - chr1_4:58360945-58360964 None:intergenic 35.0%
GTGAACGTGTGAATTGAATT+GGG - chr1_4:58360991-58361010 None:intergenic 35.0%
TGAGCTTCAACATTGGATTA+GGG - chr1_4:58361020-58361039 None:intergenic 35.0%
ATGAGCTTCAACATTGGATT+AGG - chr1_4:58361021-58361040 None:intergenic 35.0%
GATGAAATGAGCTTCAACAT+TGG - chr1_4:58361027-58361046 None:intergenic 35.0%
!!! AGAGTTTTGAATTCTCTCAG+CGG + chr1_4:58361123-58361142 Msa0173150:CDS 35.0%
!!! AGGGAGAGTATTTTTCTGTT+CGG + chr1_4:58361173-58361192 Msa0173150:CDS 35.0%
! AGTATTTTTCTGTTCGGAGT+CGG + chr1_4:58361179-58361198 Msa0173150:CDS 35.0%
! ATAGGTGTTGTACTGTTGTT+TGG + chr1_4:58361513-58361532 Msa0173150:intron 35.0%
! TAGGTGTTGTACTGTTGTTT+GGG + chr1_4:58361514-58361533 Msa0173150:intron 35.0%
TTATAGTGGCACTATAGCAT+TGG + chr1_4:58361636-58361655 Msa0173150:intron 35.0%
! GCAATTGACAACACTAGTTT+CGG + chr1_4:58361700-58361719 Msa0173150:intron 35.0%
! CAATTGACAACACTAGTTTC+GGG + chr1_4:58361701-58361720 Msa0173150:intron 35.0%
! TGTTATCGTAGTTTTCTGTC+CGG + chr1_4:58361919-58361938 Msa0173150:intron 35.0%
AGTATGTCGACATAAGAGTT+CGG - chr1_4:58362038-58362057 None:intergenic 35.0%
ACATACTCACCATCTAAATG+AGG + chr1_4:58362051-58362070 Msa0173150:intron 35.0%
TTGACTCAACCTCATTTAGA+TGG - chr1_4:58362063-58362082 None:intergenic 35.0%
!! ATGACACTTTTAAGTCATGC+TGG + chr1_4:58362108-58362127 Msa0173150:intron 35.0%
ATAGGACACGACAAAGTTTA+GGG - chr1_4:58362205-58362224 None:intergenic 35.0%
TATAGGACACGACAAAGTTT+AGG - chr1_4:58362206-58362225 None:intergenic 35.0%
TTGATGAAAGAGGGTAGTAT+AGG - chr1_4:58362223-58362242 None:intergenic 35.0%
AAAAGAGGTCTATGTTGCAA+CGG - chr1_4:58362379-58362398 None:intergenic 35.0%
ATGTAAAATCCTGGGAAAAG+AGG - chr1_4:58362394-58362413 None:intergenic 35.0%
!! GATTATTTTTCCATGCATCC+AGG + chr1_4:58362682-58362701 Msa0173150:intron 35.0%
TGTAAAGCTGCCAATAGTTT+GGG - chr1_4:58362710-58362729 None:intergenic 35.0%
TCAGAGCTAGATACTACATT+GGG - chr1_4:58362800-58362819 None:intergenic 35.0%
TTTAACCGTCTTCATGAAGT+TGG + chr1_4:58362860-58362879 Msa0173150:CDS 35.0%
TTAACCGTCTTCATGAAGTT+GGG + chr1_4:58362861-58362880 Msa0173150:CDS 35.0%
CGCATACAAAATCACATACT+TGG - chr1_4:58362895-58362914 None:intergenic 35.0%
! TACCAGATTTCAAGTATCCA+TGG + chr1_4:58363002-58363021 Msa0173150:intron 35.0%
! ACCAGATTTCAAGTATCCAT+GGG + chr1_4:58363003-58363022 Msa0173150:intron 35.0%
! GATCAACTTTTACAGTAAGC+GGG - chr1_4:58363255-58363274 None:intergenic 35.0%
CCAATAAATGCAAGCACAAA+AGG - chr1_4:58363541-58363560 None:intergenic 35.0%
! CCTTTTGTGCTTGCATTTAT+TGG + chr1_4:58363538-58363557 Msa0173150:intron 35.0%
TGCTTGCATTTATTGGAACA+TGG + chr1_4:58363545-58363564 Msa0173150:intron 35.0%
GCTTGCATTTATTGGAACAT+GGG + chr1_4:58363546-58363565 Msa0173150:intron 35.0%
CATTTATTGGAACATGGGAA+TGG + chr1_4:58363551-58363570 Msa0173150:intron 35.0%
TTTATTGGAACATGGGAATG+GGG + chr1_4:58363553-58363572 Msa0173150:intron 35.0%
ATATGAAGTCAACTCATTCG+GGG - chr1_4:58363743-58363762 None:intergenic 35.0%
CATATGAAGTCAACTCATTC+GGG - chr1_4:58363744-58363763 None:intergenic 35.0%
CCATATGAAGTCAACTCATT+CGG - chr1_4:58363745-58363764 None:intergenic 35.0%
! TGATGCCTAGAGAGATTTTA+TGG + chr1_4:58363872-58363891 Msa0173150:intron 35.0%
CATCTCCATAAAATCTCTCT+AGG - chr1_4:58363880-58363899 None:intergenic 35.0%
TGGTGCAATCCTATTGTTAT+GGG - chr1_4:58364009-58364028 None:intergenic 35.0%
TTGGTGCAATCCTATTGTTA+TGG - chr1_4:58364010-58364029 None:intergenic 35.0%
ATAACAATAGGATTGCACCA+AGG + chr1_4:58364009-58364028 Msa0173150:intron 35.0%
TAACAATAGGATTGCACCAA+GGG + chr1_4:58364010-58364029 Msa0173150:intron 35.0%
AGTAAAAAGGTAAGGGCTTA+GGG - chr1_4:58364040-58364059 None:intergenic 35.0%
AAGTAAAAAGGTAAGGGCTT+AGG - chr1_4:58364041-58364060 None:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG - chr1_4:58364112-58364131 None:intergenic 35.0%
TAGAAGCAAGACATAGTACA+TGG + chr1_4:58364211-58364230 Msa0173150:intron 35.0%
TGGAATGTAACTTCAGCAAA+AGG + chr1_4:58364231-58364250 Msa0173150:intron 35.0%
TTCAAGCTAGGTAGTTGAAA+TGG + chr1_4:58364373-58364392 Msa0173150:intron 35.0%
!! AGTACTCTGCTTAAGTTGAA+AGG + chr1_4:58364428-58364447 Msa0173150:intron 35.0%
!! AGATTAGACGGATTAGGATT+AGG + chr1_4:58364576-58364595 Msa0173150:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG + chr1_4:58364630-58364649 Msa0173150:intron 35.0%
AGATGGTAGAAAATAGGCTT+AGG + chr1_4:58364647-58364666 Msa0173150:intron 35.0%
AGTCAGATCAAAAGATGTAG+AGG + chr1_4:58364736-58364755 Msa0173150:intron 35.0%
!!! AGCAATGTCGGCATTTTTTA+GGG - chr1_4:58364995-58365014 None:intergenic 35.0%
!!! TAGCAATGTCGGCATTTTTT+AGG - chr1_4:58364996-58365015 None:intergenic 35.0%
TAAAAAATGCCGACATTGCT+AGG + chr1_4:58364995-58365014 Msa0173150:intron 35.0%
TTGCATCCTGAATCTAAGTT+TGG + chr1_4:58365144-58365163 Msa0173150:intron 35.0%
ACTTCACCAAACTTAGATTC+AGG - chr1_4:58365153-58365172 None:intergenic 35.0%
! TCTAAGTTTGGTGAAGTCTT+TGG + chr1_4:58365156-58365175 Msa0173150:intron 35.0%
!! GAAATTTACTCTGAAGTGCA+CGG + chr1_4:58365322-58365341 Msa0173150:intron 35.0%
CAAACTGTATGAGAAACAAG+AGG - chr1_4:58365414-58365433 None:intergenic 35.0%
GGACTCATTAATGCTTATGT+AGG - chr1_4:58365773-58365792 None:intergenic 35.0%
!! ACAAGAAAAGGCACTTAGTA+CGG - chr1_4:58365794-58365813 None:intergenic 35.0%
TTCTTATAATAAGGACCGGA+GGG - chr1_4:58365974-58365993 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG - chr1_4:58365973-58365992 None:intergenic 35.0%
TTTCTTATAATAAGGACCGG+AGG + chr1_4:58365973-58365992 Msa0173150:intron 35.0%
TTCTTATAATAAGGACCGGA+GGG + chr1_4:58365974-58365993 Msa0173150:intron 35.0%
TCGTTAATTGTGCAGCATAT+AGG + chr1_4:58366076-58366095 Msa0173150:intron 35.0%
!!! ATTTTGGAGCTGCAATATCT+GGG + chr1_4:58366125-58366144 Msa0173150:CDS 35.0%
!! CATTTGTTGTGTTGTTGAAC+AGG + chr1_4:58366325-58366344 Msa0173150:intron 35.0%
ATTGAAACTTACACTCGAGT+TGG + chr1_4:58366358-58366377 Msa0173150:CDS 35.0%
GATGGAAATCAGTAAGATTC+AGG + chr1_4:58366391-58366410 Msa0173150:CDS 35.0%
AGAGAAAAACAAGCTTGTCT+AGG - chr1_4:58366631-58366650 None:intergenic 35.0%
CATAAAGGATTCTACAATGG+AGG - chr1_4:58366706-58366725 None:intergenic 35.0%
GTAGAATCCTTTATGTTAGC+AGG + chr1_4:58366711-58366730 Msa0173150:intron 35.0%
ACAGTATCCTGCTAACATAA+AGG - chr1_4:58366721-58366740 None:intergenic 35.0%
GGTTCAACACATAGAATTAG+GGG - chr1_4:58366859-58366878 None:intergenic 35.0%
CAGGTTCAACACATAGAATT+AGG - chr1_4:58366861-58366880 None:intergenic 35.0%
AACTCATGATTGACAGTTCA+CGG + chr1_4:58366881-58366900 Msa0173150:intron 35.0%
AGACGTTATAGTTTATCCTG+TGG + chr1_4:58366911-58366930 Msa0173150:intron 35.0%
!! AGGAAGTTTTGGTGTGATTT+AGG + chr1_4:58366937-58366956 Msa0173150:intron 35.0%
CACTTGTGTTAGGATATCAA+AGG - chr1_4:58366963-58366982 None:intergenic 35.0%
!!! TTCGGGGTTGAAATCTTTTT+TGG + chr1_4:58367242-58367261 Msa0173150:intron 35.0%
! TTTCAGGTAAATTCAGGGAA+AGG + chr1_4:58367489-58367508 Msa0173150:intron 35.0%
! TAACTTGTAACACATGAGGT+GGG - chr1_4:58367538-58367557 None:intergenic 35.0%
! ATAACTTGTAACACATGAGG+TGG - chr1_4:58367539-58367558 None:intergenic 35.0%
TGTGTTACAAGTTATAGACG+AGG + chr1_4:58367544-58367563 Msa0173150:CDS 35.0%
! GCATAATTTTCATAGGCTCT+TGG + chr1_4:58367798-58367817 Msa0173150:intron 35.0%
ATGAGAACTTTCATGTCACT+CGG + chr1_4:58367883-58367902 Msa0173150:intron 35.0%
! GCATAATTTTCATAGGCTCT+TGG + chr1_4:58367798-58367817 Msa0173150:intron 35.0%
TCACATCAGTTAATCCGTAA+TGG - chr1_4:58368130-58368149 None:intergenic 35.0%
! TTACGGATTAACTGATGTGA+AGG + chr1_4:58368130-58368149 Msa0173150:CDS 35.0%
TCACTTATGTATTGTACCTC+AGG + chr1_4:58368214-58368233 Msa0173150:intron 35.0%
! TATTGTACCTCAGGTTTTTC+TGG + chr1_4:58368223-58368242 Msa0173150:intron 35.0%
! ATTGTACCTCAGGTTTTTCT+GGG + chr1_4:58368224-58368243 Msa0173150:intron 35.0%
TCACAGATCAACATTTAGCA+GGG - chr1_4:58368310-58368329 None:intergenic 35.0%
ATCACAGATCAACATTTAGC+AGG - chr1_4:58368311-58368330 None:intergenic 35.0%
!! AAATTGGGCATCGAGATATA+TGG - chr1_4:58368402-58368421 None:intergenic 35.0%
GTCCAAAATTCAGTCATGAT+AGG + chr1_4:58368596-58368615 Msa0173150:intron 35.0%
! TGCCTATCATGACTGAATTT+TGG - chr1_4:58368601-58368620 None:intergenic 35.0%
CGTACAATACATCAATTGGT+GGG - chr1_4:58368660-58368679 None:intergenic 35.0%
AGCTTCTTGTGTCAAAAACA+GGG - chr1_4:58368691-58368710 None:intergenic 35.0%
!! ATGACTGAATTTTAAAGGCG+GGG - chr1_4:58368778-58368797 None:intergenic 35.0%
ATACCAGTTATATAGTGTGG+TGG + chr1_4:58369127-58369146 Msa0173150:intron 35.0%
GTACAATGCCTTAAGAATGT+GGG + chr1_4:58369223-58369242 Msa0173150:CDS 35.0%
! TTCAATTGATAGTTGGGCAA+AGG + chr1_4:58369475-58369494 Msa0173150:intron 35.0%
AGAAAATTAGCATTCTGCTC+GGG - chr1_4:58369544-58369563 None:intergenic 35.0%
CAGAAAATTAGCATTCTGCT+CGG - chr1_4:58369545-58369564 None:intergenic 35.0%
!! TTGGTTTTTGATAATCTGGG+TGG + chr1_4:58369602-58369621 Msa0173150:intron 35.0%
GAGTACCCTGAAATCAAAAT+TGG + chr1_4:58369677-58369696 Msa0173150:intron 35.0%
TAGCAATTCATTGCAGGAAA+AGG - chr1_4:58369955-58369974 None:intergenic 35.0%
TTATGCTAGCAATTCATTGC+AGG - chr1_4:58369961-58369980 None:intergenic 35.0%
! GCCATCTTTTATTGCCTTAT+TGG + chr1_4:58369984-58370003 Msa0173150:intron 35.0%
!! ACAAATTAACTTGCTACAGG+TGG + chr1_4:58370037-58370056 Msa0173150:intron 35.0%
GGTACTACTACCATTCAAAA+AGG + chr1_4:58370444-58370463 Msa0173150:CDS 35.0%
ATTGCTACTCTCTATCAACA+CGG - chr1_4:58370475-58370494 None:intergenic 35.0%
TTTGCCAACAATCGTACAAT+TGG + chr1_4:58370788-58370807 Msa0173150:intron 35.0%
TGTACCAATTGTACGATTGT+TGG - chr1_4:58370795-58370814 None:intergenic 35.0%
CAATCGTACAATTGGTACAA+CGG + chr1_4:58370796-58370815 Msa0173150:intron 35.0%
!! TTGGTACAACGGTTTTTAAG+CGG + chr1_4:58370807-58370826 Msa0173150:intron 35.0%
TAAAAGTAAGGTTGCACAGA+AGG - chr1_4:58370916-58370935 None:intergenic 35.0%
!! TGTGCAACCTTACTTTTATG+TGG + chr1_4:58370918-58370937 Msa0173150:intron 35.0%
GTAGGTTACAAAAGAAAGAG+AGG + chr1_4:58370989-58371008 Msa0173150:intron 35.0%
GAGACTAAATCTGTTGAACA+AGG + chr1_4:58371185-58371204 Msa0173150:CDS 35.0%
GACTAAATCTGTTGAACAAG+GGG + chr1_4:58371187-58371206 Msa0173150:CDS 35.0%
CATTACATCTCCTAATTGAC+CGG - chr1_4:58371237-58371256 None:intergenic 35.0%
CAATTGCCAGAGATATACTA+CGG + chr1_4:58371282-58371301 Msa0173150:CDS 35.0%
AATTGCCAGAGATATACTAC+GGG + chr1_4:58371283-58371302 Msa0173150:CDS 35.0%
ATGGAGGTGAAACTTTGTAT+TGG - chr1_4:58371336-58371355 None:intergenic 35.0%
TTTGTGCTCGTCATCTTTAA+TGG + chr1_4:58371560-58371579 Msa0173150:intron 35.0%
AGAAAACTATTGCTGCAAGA+AGG + chr1_4:58371818-58371837 Msa0173150:CDS 35.0%
! AAATCTCTCTTATTTGCCGA+AGG - chr1_4:58371868-58371887 None:intergenic 35.0%
CTAGCACCTAATGTAAAAGA+AGG + chr1_4:58371895-58371914 Msa0173150:CDS 35.0%
! TCGAGACCTTCTTTTACATT+AGG - chr1_4:58371904-58371923 None:intergenic 35.0%
!!! CAGATCTTTGATTTGGCTTT+TGG + chr1_4:58371949-58371968 Msa0173150:CDS 35.0%
GAGAAGTAAATCACTAATGC+CGG + chr1_4:58371994-58372013 Msa0173150:exon 35.0%
! AACATATTTTGCCCTGAACA+CGG - chr1_4:58372130-58372149 None:intergenic 35.0%
CGCGACAAGAAAGGAAAATT+TGG + chr1_4:58360772-58360791 Msa0173150:five_prime_UTR 40.0%
TTTGGTCATTTGGATAGACG+AGG + chr1_4:58360821-58360840 Msa0173150:five_prime_UTR 40.0%
TTGGTCATTTGGATAGACGA+GGG + chr1_4:58360822-58360841 Msa0173150:five_prime_UTR 40.0%
GATAGACGAGGGTTTATGAA+GGG + chr1_4:58360833-58360852 Msa0173150:five_prime_UTR 40.0%
!! AATTGAATGGGTTTTGACGG+TGG - chr1_4:58360942-58360961 None:intergenic 40.0%
GGTGAACGTGTGAATTGAAT+TGG - chr1_4:58360992-58361011 None:intergenic 40.0%
! CAACATTGGATTAGGGGATT+AGG - chr1_4:58361013-58361032 None:intergenic 40.0%
! GAGCTTCAACATTGGATTAG+GGG - chr1_4:58361019-58361038 None:intergenic 40.0%
AGTCGGAGTCATCGTTATTT+GGG + chr1_4:58361150-58361169 Msa0173150:CDS 40.0%
TTCAGCATCAACCACATGAT+CGG - chr1_4:58361220-58361239 None:intergenic 40.0%
!! GATTACCTCACTGTTGGTTT+CGG + chr1_4:58361312-58361331 Msa0173150:intron 40.0%
AAATTCCGAAACCAACAGTG+AGG - chr1_4:58361320-58361339 None:intergenic 40.0%
! TCTGTTTGATGTTGCTTCGA+TGG + chr1_4:58361832-58361851 Msa0173150:intron 40.0%
! CTGTTTGATGTTGCTTCGAT+GGG + chr1_4:58361833-58361852 Msa0173150:intron 40.0%
!!! ATGCTGGTTTGCGTTTGTTT+TGG + chr1_4:58362124-58362143 Msa0173150:intron 40.0%
!!! TGCTGGTTTGCGTTTGTTTT+GGG + chr1_4:58362125-58362144 Msa0173150:intron 40.0%
! CAAAGTTTAGGGCAGCAATA+GGG - chr1_4:58362194-58362213 None:intergenic 40.0%
! ACAAAGTTTAGGGCAGCAAT+AGG - chr1_4:58362195-58362214 None:intergenic 40.0%
!! ATCAGGAGGTTGATGAAAGA+GGG - chr1_4:58362232-58362251 None:intergenic 40.0%
!! AATCAGGAGGTTGATGAAAG+AGG - chr1_4:58362233-58362252 None:intergenic 40.0%
TTTCTCCTTTCTGTTGGATC+AGG + chr1_4:58362342-58362361 Msa0173150:intron 40.0%
CAAAACCTGATCCAACAGAA+AGG - chr1_4:58362350-58362369 None:intergenic 40.0%
! CTTTCTGTTGGATCAGGTTT+TGG + chr1_4:58362348-58362367 Msa0173150:intron 40.0%
TATCCGTCTTTGCTCATTAC+AGG + chr1_4:58362462-58362481 Msa0173150:intron 40.0%
AAGCCTGTAATGAGCAAAGA+CGG - chr1_4:58362468-58362487 None:intergenic 40.0%
TCAGTGCATGTATGTGTTCA+TGG + chr1_4:58362521-58362540 Msa0173150:intron 40.0%
GCATGTATGTGTTCATGGAT+TGG + chr1_4:58362526-58362545 Msa0173150:intron 40.0%
GTAAAGCTGCCAATAGTTTG+GGG - chr1_4:58362709-58362728 None:intergenic 40.0%
CTGTAAAGCTGCCAATAGTT+TGG - chr1_4:58362711-58362730 None:intergenic 40.0%
CAAACTATTGGCAGCTTTAC+AGG + chr1_4:58362709-58362728 Msa0173150:CDS 40.0%
GTCAGAGCTAGATACTACAT+TGG - chr1_4:58362801-58362820 None:intergenic 40.0%
! CCAGATTTCAAGTATCCATG+GGG + chr1_4:58363004-58363023 Msa0173150:intron 40.0%
!!! TGACTTTTACTTGGTGTTGC+AGG + chr1_4:58363378-58363397 Msa0173150:intron 40.0%
TGATATGACCTCGAAAGATG+TGG - chr1_4:58363440-58363459 None:intergenic 40.0%
TCGAGGTCATATCAACACTA+AGG + chr1_4:58363446-58363465 Msa0173150:CDS 40.0%
CGAGGTCATATCAACACTAA+GGG + chr1_4:58363447-58363466 Msa0173150:CDS 40.0%
TCATGTTGCGACTTACTCTA+AGG + chr1_4:58363501-58363520 Msa0173150:CDS 40.0%
TATGAAGTCAACTCATTCGG+GGG - chr1_4:58363742-58363761 None:intergenic 40.0%
! CCGAATGAGTTGACTTCATA+TGG + chr1_4:58363742-58363761 Msa0173150:intron 40.0%
! TCTCAAGGCACTCTAACATT+AGG - chr1_4:58363787-58363806 None:intergenic 40.0%
TGGAGATGCCTAGAGAATAA+AGG + chr1_4:58363892-58363911 Msa0173150:intron 40.0%
GGAGATGCCTAGAGAATAAA+GGG + chr1_4:58363893-58363912 Msa0173150:intron 40.0%
GAGATGCCTAGAGAATAAAG+GGG + chr1_4:58363894-58363913 Msa0173150:intron 40.0%
TCCTAACCCCTTTATTCTCT+AGG - chr1_4:58363903-58363922 None:intergenic 40.0%
AGCTATCAAGGATGTGTATG+AGG + chr1_4:58363936-58363955 Msa0173150:intron 40.0%
GCTATCAAGGATGTGTATGA+GGG + chr1_4:58363937-58363956 Msa0173150:intron 40.0%
TAGTCATGCTTGAAGAGTTG+AGG + chr1_4:58364137-58364156 Msa0173150:intron 40.0%
AGTCATGCTTGAAGAGTTGA+GGG + chr1_4:58364138-58364157 Msa0173150:intron 40.0%
AGTTGAGGGAGGAACTAAAT+GGG + chr1_4:58364152-58364171 Msa0173150:intron 40.0%
ATGTCTTGCTTCTACTCAAG+CGG - chr1_4:58364205-58364224 None:intergenic 40.0%
CAAAAGGTGAAGTTCTACCT+TGG + chr1_4:58364247-58364266 Msa0173150:intron 40.0%
ATATCCAACTTTCACCTCCA+AGG - chr1_4:58364267-58364286 None:intergenic 40.0%
GTCAGACTAGTGATGTTGTA+TGG + chr1_4:58364470-58364489 Msa0173150:intron 40.0%
GGATGAGTGGTAAGATTAGA+CGG + chr1_4:58364564-58364583 Msa0173150:intron 40.0%
! GTGGTAAGATTAGACGGATT+AGG + chr1_4:58364570-58364589 Msa0173150:intron 40.0%
ACCATTAGAGAGAGAGAGTT+GGG + chr1_4:58364605-58364624 Msa0173150:intron 40.0%
TGGTAGAAAATAGGCTTAGG+TGG + chr1_4:58364650-58364669 Msa0173150:intron 40.0%
AGTACGAAGAGTAGATCAGA+TGG + chr1_4:58364708-58364727 Msa0173150:intron 40.0%
ATCAAAAGATGTAGAGGCAG+AGG + chr1_4:58364742-58364761 Msa0173150:intron 40.0%
AACTCACACACACAAATGTG+AGG - chr1_4:58365053-58365072 None:intergenic 40.0%
!!! ATGCTTGCCATTTTGTCTAC+AGG + chr1_4:58365080-58365099 Msa0173150:intron 40.0%
! TTTTGGGCCTGTAGACAAAA+TGG - chr1_4:58365090-58365109 None:intergenic 40.0%
GCAAATTGATGCACAGCTTA+GGG - chr1_4:58365128-58365147 None:intergenic 40.0%
TGCAAATTGATGCACAGCTT+AGG - chr1_4:58365129-58365148 None:intergenic 40.0%
AGGTAAAATAACGAAACCGC+AGG - chr1_4:58365279-58365298 None:intergenic 40.0%
! TGCATTGTTGTTGTCCTTCA+AGG + chr1_4:58365346-58365365 Msa0173150:intron 40.0%
! TATCCAAGGCTAGCAGATTT+TGG + chr1_4:58366109-58366128 Msa0173150:CDS 40.0%
!!! GATTTTGGAGCTGCAATATC+TGG + chr1_4:58366124-58366143 Msa0173150:CDS 40.0%
!!! TTTTGGAGCTGCAATATCTG+GGG + chr1_4:58366126-58366145 Msa0173150:CDS 40.0%
! CTAGCTCTTCAAGAACTTGT+TGG - chr1_4:58366168-58366187 None:intergenic 40.0%
!! CGAGTTGGTAAAGAAAGAGA+TGG + chr1_4:58366373-58366392 Msa0173150:CDS 40.0%
! ACAAGCTTGTCTAGGATTTG+AGG - chr1_4:58366623-58366642 None:intergenic 40.0%
GAACTGTCAATCATGAGTTC+AGG - chr1_4:58366880-58366899 None:intergenic 40.0%
TATAGTTTATCCTGTGGTCG+AGG + chr1_4:58366917-58366936 Msa0173150:intron 40.0%
! GTTTGTTTCTCGAAGGACTT+CGG + chr1_4:58367224-58367243 Msa0173150:intron 40.0%
! TTTGTTTCTCGAAGGACTTC+GGG + chr1_4:58367225-58367244 Msa0173150:intron 40.0%
TCAACCAGTCCAAGTAGTTA+CGG - chr1_4:58367622-58367641 None:intergenic 40.0%
AGATTTCGATGTATGCCTCA+TGG + chr1_4:58367709-58367728 Msa0173150:intron 40.0%
TTGCTGAAACCTTGTTCTAG+GGG - chr1_4:58367746-58367765 None:intergenic 40.0%
CTTGCTGAAACCTTGTTCTA+GGG - chr1_4:58367747-58367766 None:intergenic 40.0%
TCTTGCTGAAACCTTGTTCT+AGG - chr1_4:58367748-58367767 None:intergenic 40.0%
TCACAACAGATTCAGACTCA+TGG - chr1_4:58367864-58367883 None:intergenic 40.0%
TGAGAACTTTCATGTCACTC+GGG + chr1_4:58367884-58367903 Msa0173150:intron 40.0%
GACATGAAAGTTCTCATCAC+TGG - chr1_4:58367880-58367899 None:intergenic 40.0%
ATAGCTGTTGGGAAATTGAG+AGG + chr1_4:58368170-58368189 Msa0173150:CDS 40.0%
TAGCTGTTGGGAAATTGAGA+GGG + chr1_4:58368171-58368190 Msa0173150:CDS 40.0%
AAATTGAGAGGGACTTCACA+AGG + chr1_4:58368182-58368201 Msa0173150:CDS 40.0%
TAAACACCCAGAAAAACCTG+AGG - chr1_4:58368233-58368252 None:intergenic 40.0%
ACCAAATGGTTTCTTGAACC+AGG + chr1_4:58368339-58368358 Msa0173150:intron 40.0%
AATAGCACACAATTCAGAGC+AGG - chr1_4:58368470-58368489 None:intergenic 40.0%
! TGCTCTGAATTGTGTGCTAT+TGG + chr1_4:58368469-58368488 Msa0173150:intron 40.0%
TATTACAGGCATGCTTGACT+TGG + chr1_4:58368542-58368561 Msa0173150:intron 40.0%
GCGTACAATACATCAATTGG+TGG - chr1_4:58368661-58368680 None:intergenic 40.0%
GCTGCGTACAATACATCAAT+TGG - chr1_4:58368664-58368683 None:intergenic 40.0%
CTTGTGTCAAAAACAGGGTA+AGG - chr1_4:58368686-58368705 None:intergenic 40.0%
CAGCTTCTTGTGTCAAAAAC+AGG - chr1_4:58368692-58368711 None:intergenic 40.0%
!!! CAGGAACAAAGTTAGCCTTT+TGG - chr1_4:58368924-58368943 None:intergenic 40.0%
CAGAGAATCGGAAGAACTTA+CGG - chr1_4:58369040-58369059 None:intergenic 40.0%
AAGTTCTTCCGATTCTCTGT+TGG + chr1_4:58369041-58369060 Msa0173150:CDS 40.0%
CTAATCCTCCAACAGAGAAT+CGG - chr1_4:58369052-58369071 None:intergenic 40.0%
GTATCAATTCAGCCTAGTGA+AGG - chr1_4:58369111-58369130 None:intergenic 40.0%
ACACCACCACACTATATAAC+TGG - chr1_4:58369133-58369152 None:intergenic 40.0%
! ACATATATAGGTGCTATGCC+AGG + chr1_4:58369193-58369212 Msa0173150:CDS 40.0%
GGTACAATGCCTTAAGAATG+TGG + chr1_4:58369222-58369241 Msa0173150:CDS 40.0%
GAAAATTAGCATTCTGCTCG+GGG - chr1_4:58369543-58369562 None:intergenic 40.0%
! CGAGCAGAATGCTAATTTTC+TGG + chr1_4:58369543-58369562 Msa0173150:CDS 40.0%
TGTTTGCACTGCAAATGTAG+TGG + chr1_4:58369761-58369780 Msa0173150:CDS 40.0%
GATGATACCAAATCCCCTAT+TGG + chr1_4:58369785-58369804 Msa0173150:CDS 40.0%
TACCAAATCCCCTATTGGAT+AGG + chr1_4:58369790-58369809 Msa0173150:CDS 40.0%
ATCCTATCCAATAGGGGATT+TGG - chr1_4:58369795-58369814 None:intergenic 40.0%
AAATCCCCTATTGGATAGGA+TGG + chr1_4:58369794-58369813 Msa0173150:CDS 40.0%
AACCTCCATCCTATCCAATA+GGG - chr1_4:58369802-58369821 None:intergenic 40.0%
ATGGAGGTTGTTACTATTGC+TGG + chr1_4:58369813-58369832 Msa0173150:CDS 40.0%
TGGAGGTTGTTACTATTGCT+GGG + chr1_4:58369814-58369833 Msa0173150:CDS 40.0%
GCACATTGCAAGAGATTATC+TGG + chr1_4:58369857-58369876 Msa0173150:CDS 40.0%
AAAACTACACGTGAAGCATG+TGG + chr1_4:58369882-58369901 Msa0173150:CDS 40.0%
TGAAGCATGTGGAATAAAGC+CGG + chr1_4:58369893-58369912 Msa0173150:CDS 40.0%
! TTTCTTTTCCACCCGTTTAC+AGG + chr1_4:58369926-58369945 Msa0173150:intron 40.0%
! TTCTTTTCCACCCGTTTACA+GGG + chr1_4:58369927-58369946 Msa0173150:intron 40.0%
AGGAAAAGGAACCCTGTAAA+CGG - chr1_4:58369941-58369960 None:intergenic 40.0%
!! AATTAACTTGCTACAGGTGG+AGG + chr1_4:58370040-58370059 Msa0173150:intron 40.0%
GAAAACTATTGCCGAGAATC+AGG + chr1_4:58370092-58370111 Msa0173150:CDS 40.0%
TTGCTACTCTCTATCAACAC+GGG - chr1_4:58370474-58370493 None:intergenic 40.0%
! GAGTTTTCATCGGTATGTTC+AGG - chr1_4:58370498-58370517 None:intergenic 40.0%
TGAGATGAACACAAATCCAC+CGG + chr1_4:58370527-58370546 Msa0173150:CDS 40.0%
GATGATTGAAGTCTTCATGC+AGG - chr1_4:58370851-58370870 None:intergenic 40.0%
TGAATCGAAGACTGTTGAGA+AGG + chr1_4:58371025-58371044 Msa0173150:CDS 40.0%
AACACCTATTGGCGTTGTTA+TGG + chr1_4:58371121-58371140 Msa0173150:CDS 40.0%
ACACCTATTGGCGTTGTTAT+GGG + chr1_4:58371122-58371141 Msa0173150:CDS 40.0%
AAATCTGTTGAACAAGGGGA+CGG + chr1_4:58371191-58371210 Msa0173150:CDS 40.0%
!! AAAGGAGCATTGCATATCAC+CGG + chr1_4:58371215-58371234 Msa0173150:CDS 40.0%
TTGCATATCACCGGTCAATT+AGG + chr1_4:58371224-58371243 Msa0173150:CDS 40.0%
TTTCTCCCGTAGTATATCTC+TGG - chr1_4:58371291-58371310 None:intergenic 40.0%
!!! TTGGCAAAGAAAGCGTTTTC+TGG - chr1_4:58371317-58371336 None:intergenic 40.0%
ATTGCTAGATCCTTCTTCAC+AGG - chr1_4:58371443-58371462 None:intergenic 40.0%
AAGAAGGATCTAGCAATGAC+TGG + chr1_4:58371446-58371465 Msa0173150:CDS 40.0%
AGAAGGATCTAGCAATGACT+GGG + chr1_4:58371447-58371466 Msa0173150:CDS 40.0%
TCGTCATCTTTAATGGTCAC+TGG + chr1_4:58371567-58371586 Msa0173150:intron 40.0%
! AACCTGCAATTTTCACAGCA+TGG - chr1_4:58371794-58371813 None:intergenic 40.0%
GCTGTGAAAATTGCAGGTTA+AGG + chr1_4:58371795-58371814 Msa0173150:intron 40.0%
AGTAAATCACTAATGCCGGT+AGG + chr1_4:58371998-58372017 Msa0173150:exon 40.0%
! TTTTCTATTGAGCTGGGAAC+CGG + chr1_4:58372040-58372059 Msa0173150:three_prime_UTR 40.0%
! ACATATTTTGCCCTGAACAC+GGG - chr1_4:58372129-58372148 None:intergenic 40.0%
! TTTTACAACTGGGATACACC+AGG - chr1_4:58372166-58372185 None:intergenic 40.0%
ATTCAGTTCCGCGACAAGAA+AGG + chr1_4:58360763-58360782 Msa0173150:five_prime_UTR 45.0%
GGATAGACGAGGGTTTATGA+AGG + chr1_4:58360832-58360851 Msa0173150:five_prime_UTR 45.0%
! AACTCTAAGAAGCGGAGATG+CGG - chr1_4:58361109-58361128 None:intergenic 45.0%
!! ATTCTCTCAGCGGATTGAGT+CGG + chr1_4:58361133-58361152 Msa0173150:CDS 45.0%
GAGTCGGAGTCATCGTTATT+TGG + chr1_4:58361149-58361168 Msa0173150:CDS 45.0%
GGAGTCATCGTTATTTGGGA+GGG + chr1_4:58361154-58361173 Msa0173150:CDS 45.0%
TCAGCATCAACCACATGATC+GGG - chr1_4:58361219-58361238 None:intergenic 45.0%
! ATCTTCAGGTCTGGGATAAG+TGG - chr1_4:58361295-58361314 None:intergenic 45.0%
GTGAGGTAATCTTCAGGTCT+GGG - chr1_4:58361303-58361322 None:intergenic 45.0%
AGTGAGGTAATCTTCAGGTC+TGG - chr1_4:58361304-58361323 None:intergenic 45.0%
CCAACAGTGAGGTAATCTTC+AGG - chr1_4:58361309-58361328 None:intergenic 45.0%
CCTGAAGATTACCTCACTGT+TGG + chr1_4:58361306-58361325 Msa0173150:intron 45.0%
TTGCTTCGATGGGATCTTGT+TGG + chr1_4:58361843-58361862 Msa0173150:intron 45.0%
AGTTCGGAGAGAAAGACAGA+AGG - chr1_4:58362022-58362041 None:intergenic 45.0%
! CAACATAGACCTCTTTTCCC+AGG + chr1_4:58362382-58362401 Msa0173150:CDS 45.0%
CTTTGCTCATTACAGGCTTC+TGG + chr1_4:58362469-58362488 Msa0173150:intron 45.0%
! TGGCTCATCTTTAAGGAGGA+AGG - chr1_4:58362768-58362787 None:intergenic 45.0%
! AGTCTGGCTCATCTTTAAGG+AGG - chr1_4:58362772-58362791 None:intergenic 45.0%
! CAGAGTCTGGCTCATCTTTA+AGG - chr1_4:58362775-58362794 None:intergenic 45.0%
ACTACATTGGGATCAGAGTC+TGG - chr1_4:58362788-58362807 None:intergenic 45.0%
GAGTCCCAACTTCATGAAGA+CGG - chr1_4:58362868-58362887 None:intergenic 45.0%
CCCCATGGATACTTGAAATC+TGG - chr1_4:58363007-58363026 None:intergenic 45.0%
ACGTCTGCGCATAACAGATA+TGG + chr1_4:58363052-58363071 Msa0173150:CDS 45.0%
CTGCGCATAACAGATATGGT+AGG + chr1_4:58363056-58363075 Msa0173150:intron 45.0%
! TCCTTATTTGCAGGTTAGCG+AGG + chr1_4:58363228-58363247 Msa0173150:intron 45.0%
TCCTCGCTAACCTGCAAATA+AGG - chr1_4:58363232-58363251 None:intergenic 45.0%
CATAAAGGCCACATCTTTCG+AGG + chr1_4:58363429-58363448 Msa0173150:CDS 45.0%
GCCTAGAGAATAAAGGGGTT+AGG + chr1_4:58363899-58363918 Msa0173150:intron 45.0%
TTCAACTAGTGTGAGGATGC+AGG + chr1_4:58363963-58363982 Msa0173150:intron 45.0%
GAGTTGAGGGAGGAACTAAA+TGG + chr1_4:58364151-58364170 Msa0173150:intron 45.0%
TTGCTTCTACTCAAGCGGTA+AGG - chr1_4:58364200-58364219 None:intergenic 45.0%
AAGGTGAAGTTCTACCTTGG+AGG + chr1_4:58364250-58364269 Msa0173150:intron 45.0%
TCTACCTTGGAGGTGAAAGT+TGG + chr1_4:58364260-58364279 Msa0173150:intron 45.0%
TGTTGTATGGTGCAGAGTGT+TGG + chr1_4:58364483-58364502 Msa0173150:intron 45.0%
! GTTGTATGGTGCAGAGTGTT+GGG + chr1_4:58364484-58364503 Msa0173150:intron 45.0%
CGCTTACTTGATTCTCGTGT+TGG - chr1_4:58364520-58364539 None:intergenic 45.0%
TCAAGTAAGCGTAGACGAGA+TGG + chr1_4:58364529-58364548 Msa0173150:intron 45.0%
CAAGTAAGCGTAGACGAGAT+GGG + chr1_4:58364530-58364549 Msa0173150:intron 45.0%
AAGTAAGCGTAGACGAGATG+GGG + chr1_4:58364531-58364550 Msa0173150:intron 45.0%
CACCATTAGAGAGAGAGAGT+TGG + chr1_4:58364604-58364623 Msa0173150:intron 45.0%
CCATTAGAGAGAGAGAGTTG+GGG + chr1_4:58364606-58364625 Msa0173150:intron 45.0%
CTTCGTACTACAGTGTCTAC+AGG - chr1_4:58364697-58364716 None:intergenic 45.0%
ACGAAGAGTAGATCAGATGG+AGG + chr1_4:58364711-58364730 Msa0173150:intron 45.0%
AAATGCCGACATTGCTAGGT+TGG + chr1_4:58364999-58365018 Msa0173150:intron 45.0%
CTGAGTTCAAACCTAGGTGA+AGG - chr1_4:58365028-58365047 None:intergenic 45.0%
CTTCACCTAGGTTTGAACTC+AGG + chr1_4:58365026-58365045 Msa0173150:intron 45.0%
!! ATGAAGTAAAGGCGCTTCGT+AGG + chr1_4:58365381-58365400 Msa0173150:intron 45.0%
TATGAGAAACAAGAGGCCAG+TGG - chr1_4:58365407-58365426 None:intergenic 45.0%
AGTTTGCGAACGCATAGATG+TGG + chr1_4:58365428-58365447 Msa0173150:intron 45.0%
! ACTAACTGAAGTACTCCCTC+CGG + chr1_4:58365839-58365858 Msa0173150:intron 45.0%
CACATACTAAGTACTCCCTC+CGG - chr1_4:58365992-58366011 None:intergenic 45.0%
!! GGGAGTACTTAGTATGTGGT+TGG + chr1_4:58365994-58366013 Msa0173150:intron 45.0%
CCACAAAGTCGATGTCTCTT+AGG - chr1_4:58366215-58366234 None:intergenic 45.0%
!! CCTAAGAGACATCGACTTTG+TGG + chr1_4:58366212-58366231 Msa0173150:intron 45.0%
GCAGCTTAAGGCCATAAAGA+AGG + chr1_4:58366562-58366581 Msa0173150:CDS 45.0%
TTAGGGGTTCTGCAAAGCAA+TGG - chr1_4:58366843-58366862 None:intergenic 45.0%
CTATTTGCAGGAATTGGGAC+TGG + chr1_4:58367082-58367101 Msa0173150:intron 45.0%
!! AGGTGCTACACCAGTCTTTT+GGG - chr1_4:58367187-58367206 None:intergenic 45.0%
!! TAGGTGCTACACCAGTCTTT+TGG - chr1_4:58367188-58367207 None:intergenic 45.0%
AACACCTTGCCTACGTGTAT+AGG - chr1_4:58367207-58367226 None:intergenic 45.0%
! GCAAGGTGTTTGTTTCTCGA+AGG + chr1_4:58367217-58367236 Msa0173150:intron 45.0%
! TTGTTTCTCGAAGGACTTCG+GGG + chr1_4:58367226-58367245 Msa0173150:intron 45.0%
CAGTGTTACCCGTAACTACT+TGG + chr1_4:58367610-58367629 Msa0173150:CDS 45.0%
TTACCCGTAACTACTTGGAC+TGG + chr1_4:58367615-58367634 Msa0173150:CDS 45.0%
CAACCAGTCCAAGTAGTTAC+GGG - chr1_4:58367621-58367640 None:intergenic 45.0%
ACAAACCTGTATTCACCCCA+AGG - chr1_4:58367653-58367672 None:intergenic 45.0%
! TGCTGAAACCTTGTTCTAGG+GGG - chr1_4:58367745-58367764 None:intergenic 45.0%
GCCTGGTTCAAGAAACCATT+TGG - chr1_4:58368343-58368362 None:intergenic 45.0%
CTTAATGAGAGCAACTAGCC+TGG - chr1_4:58368360-58368379 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG - chr1_4:58368737-58368756 None:intergenic 45.0%
!! AAGCCTTTGGTGCTTGCTTA+CGG + chr1_4:58368892-58368911 Msa0173150:intron 45.0%
TGCTTACGGTCTTTGCCAAA+AGG + chr1_4:58368906-58368925 Msa0173150:intron 45.0%
! GTATTGGCCGTTCAATTGCA+CGG + chr1_4:58369006-58369025 Msa0173150:CDS 45.0%
TATTGGCCGTTCAATTGCAC+GGG + chr1_4:58369007-58369026 Msa0173150:CDS 45.0%
TCGGAAGAACTTACGGTTCA+AGG - chr1_4:58369033-58369052 None:intergenic 45.0%
TTCTTCCGATTCTCTGTTGG+AGG + chr1_4:58369044-58369063 Msa0173150:CDS 45.0%
!! TGTTGGAGGATTAGCTGATG+TGG + chr1_4:58369058-58369077 Msa0173150:CDS 45.0%
AGCTGATGTGGCTGAAATCA+AGG + chr1_4:58369070-58369089 Msa0173150:CDS 45.0%
! GGGCATCGTCGAACATATAT+AGG + chr1_4:58369181-58369200 Msa0173150:CDS 45.0%
! AGGCATTGTACCATCTTTCC+TGG - chr1_4:58369214-58369233 None:intergenic 45.0%
TGGCTGTTCCCACATTCTTA+AGG - chr1_4:58369234-58369253 None:intergenic 45.0%
CGATGGGAACATCAAGATAG+TGG - chr1_4:58369570-58369589 None:intergenic 45.0%
TGTTCCCATCGATCTATCGA+AGG + chr1_4:58369579-58369598 Msa0173150:CDS 45.0%
CCAACCTTCGATAGATCGAT+GGG - chr1_4:58369586-58369605 None:intergenic 45.0%
ACCAACCTTCGATAGATCGA+TGG - chr1_4:58369587-58369606 None:intergenic 45.0%
CTGGGTGGTTATGTAAGAGT+CGG + chr1_4:58369617-58369636 Msa0173150:intron 45.0%
TTCCAGTGCATCAGTTGTCA+TGG - chr1_4:58369722-58369741 None:intergenic 45.0%
ACCTCCATCCTATCCAATAG+GGG - chr1_4:58369801-58369820 None:intergenic 45.0%
CAACCTCCATCCTATCCAAT+AGG - chr1_4:58369803-58369822 None:intergenic 45.0%
GGAAAAGGAACCCTGTAAAC+GGG - chr1_4:58369940-58369959 None:intergenic 45.0%
GGTTTCTGACTCCTGATTCT+CGG - chr1_4:58370106-58370125 None:intergenic 45.0%
TGCTACTCTCTATCAACACG+GGG - chr1_4:58370473-58370492 None:intergenic 45.0%
ACACAGAGAGATTGATCTGC+CGG - chr1_4:58370549-58370568 None:intergenic 45.0%
CGGTGGACCACATAAAAGTA+AGG - chr1_4:58370928-58370947 None:intergenic 45.0%
AGTCCCATAACAACGCCAAT+AGG - chr1_4:58371128-58371147 None:intergenic 45.0%
CTTCTTCACAGGCTTCTTCA+AGG - chr1_4:58371432-58371451 None:intergenic 45.0%
CTTGAAGAAGCCTGTGAAGA+AGG + chr1_4:58371430-58371449 Msa0173150:CDS 45.0%
GAAGGATCTAGCAATGACTG+GGG + chr1_4:58371448-58371467 Msa0173150:CDS 45.0%
ACAGGGAAGATTCTTCCCAT+TGG + chr1_4:58371482-58371501 Msa0173150:CDS 45.0%
TTTCAACATACCCCGCCAAT+GGG - chr1_4:58371500-58371519 None:intergenic 45.0%
! TTTTCAACATACCCCGCCAA+TGG - chr1_4:58371501-58371520 None:intergenic 45.0%
TGCCATGCTGTGAAAATTGC+AGG + chr1_4:58371789-58371808 Msa0173150:intron 45.0%
TATTGCTGCAAGAAGGAGTG+AGG + chr1_4:58371825-58371844 Msa0173150:CDS 45.0%
GGTTCATCTCAAGATCCTAC+CGG - chr1_4:58372016-58372035 None:intergenic 45.0%
GGTAGGATCTTGAGATGAAC+CGG + chr1_4:58372015-58372034 Msa0173150:three_prime_UTR 45.0%
GTAGGATCTTGAGATGAACC+GGG + chr1_4:58372016-58372035 Msa0173150:three_prime_UTR 45.0%
! ACCGGGATTTTCTATTGAGC+TGG + chr1_4:58372033-58372052 Msa0173150:three_prime_UTR 45.0%
CCCAGCTCAATAGAAAATCC+CGG - chr1_4:58372037-58372056 None:intergenic 45.0%
! CCGGGATTTTCTATTGAGCT+GGG + chr1_4:58372034-58372053 Msa0173150:three_prime_UTR 45.0%
ATTCATCTTGTCCCGTGTTC+AGG + chr1_4:58372115-58372134 Msa0173150:three_prime_UTR 45.0%
TTCATCTTGTCCCGTGTTCA+GGG + chr1_4:58372116-58372135 Msa0173150:three_prime_UTR 45.0%
!!! TAATAATTTTTTTTTTTTGA+AGG - chr1_4:58361800-58361819 None:intergenic 5.0%
!! TATATATATATATATTCAAA+TGG - chr1_4:58365488-58365507 None:intergenic 5.0%
!! TATTTATTCAAATTTATATT+TGG + chr1_4:58372196-58372215 Msa0173150:three_prime_UTR 5.0%
AAGAGTGGCGTGTTCGATTC+TGG - chr1_4:58360877-58360896 None:intergenic 50.0%
AAGCGGAGGAAGAAGAAGAG+TGG - chr1_4:58360892-58360911 None:intergenic 50.0%
!! CATTGATGGTGGAAGCGAAG+CGG - chr1_4:58360909-58360928 None:intergenic 50.0%
TTCGCTTCCACCATCAATGG+TGG + chr1_4:58360910-58360929 Msa0173150:five_prime_UTR 50.0%
GCGATAACCACCATTGATGG+TGG - chr1_4:58360920-58360939 None:intergenic 50.0%
GTGGCGATAACCACCATTGA+TGG - chr1_4:58360923-58360942 None:intergenic 50.0%
CGGAGTCATCGTTATTTGGG+AGG + chr1_4:58361153-58361172 Msa0173150:CDS 50.0%
TTCTGTTCGGAGTCGGAATC+CGG + chr1_4:58361186-58361205 Msa0173150:CDS 50.0%
TGCTGAAGCTAAAGCAGCTG+AGG + chr1_4:58361233-58361252 Msa0173150:CDS 50.0%
AGCTGAGGAAACTCCGTCAA+AGG + chr1_4:58361248-58361267 Msa0173150:CDS 50.0%
GCAGAAGAAGCAGCCTTTGA+CGG - chr1_4:58361264-58361283 None:intergenic 50.0%
CTAGTTTCGGGCTTCTGCAA+TGG + chr1_4:58361713-58361732 Msa0173150:intron 50.0%
CTTCGATGGGATCTTGTTGG+AGG + chr1_4:58361846-58361865 Msa0173150:intron 50.0%
! AGTTTAGGGCAGCAATAGGG+AGG - chr1_4:58362191-58362210 None:intergenic 50.0%
CATCCAGGACCCCAAACTAT+TGG + chr1_4:58362697-58362716 Msa0173150:intron 50.0%
TCAGGATCACTTGATCCCCA+TGG - chr1_4:58363022-58363041 None:intergenic 50.0%
GGGGATCAAGTGATCCTGAT+TGG + chr1_4:58363023-58363042 Msa0173150:CDS 50.0%
TTGGAACATGGGAATGGGGA+AGG + chr1_4:58363557-58363576 Msa0173150:intron 50.0%
TGGAACATGGGAATGGGGAA+GGG + chr1_4:58363558-58363577 Msa0173150:intron 50.0%
AGGGAGCTTCAACTAGTGTG+AGG + chr1_4:58363956-58363975 Msa0173150:intron 50.0%
AACTAGTGTGAGGATGCAGG+AGG + chr1_4:58363966-58363985 Msa0173150:intron 50.0%
ACTAGTGTGAGGATGCAGGA+GGG + chr1_4:58363967-58363986 Msa0173150:intron 50.0%
! CGGTGCTAACTGCTAACTCT+TGG - chr1_4:58364092-58364111 None:intergenic 50.0%
CATGCTTGAAGAGTTGAGGG+AGG + chr1_4:58364141-58364160 Msa0173150:intron 50.0%
TGAGGGAGGAACTAAATGGG+AGG + chr1_4:58364155-58364174 Msa0173150:intron 50.0%
ACGAGATGGGGATGTTGCAT+TGG + chr1_4:58364543-58364562 Msa0173150:intron 50.0%
GGGATGTTGCATTGGATGAG+TGG + chr1_4:58364551-58364570 Msa0173150:intron 50.0%
CCCCAACTCTCTCTCTCTAA+TGG - chr1_4:58364609-58364628 None:intergenic 50.0%
! GGTGGTTTGTGCATGTAGAG+AGG + chr1_4:58364668-58364687 Msa0173150:intron 50.0%
GGTGTCCAACCTAGCAATGT+CGG - chr1_4:58365007-58365026 None:intergenic 50.0%
! TAGGTTGGACACCTTCACCT+AGG + chr1_4:58365014-58365033 Msa0173150:intron 50.0%
GAGGTCCTGAGTTCAAACCT+AGG - chr1_4:58365034-58365053 None:intergenic 50.0%
!! CGGAGGGAGTACTTAGTATG+TGG + chr1_4:58365990-58366009 Msa0173150:intron 50.0%
! GCTCCAAAATCTGCTAGCCT+TGG - chr1_4:58366115-58366134 None:intergenic 50.0%
! TCCTGTGGTCGAGGAAGTTT+TGG + chr1_4:58366926-58366945 Msa0173150:intron 50.0%
ACCAAAACTTCCTCGACCAC+AGG - chr1_4:58366930-58366949 None:intergenic 50.0%
GACGACAAGACAGCACTTAC+AGG + chr1_4:58367110-58367129 Msa0173150:CDS 50.0%
TTGTTCCCTGCCCAAAAGAC+TGG + chr1_4:58367174-58367193 Msa0173150:intron 50.0%
! CTACACCAGTCTTTTGGGCA+GGG - chr1_4:58367182-58367201 None:intergenic 50.0%
GGTGTAGCACCTATACACGT+AGG + chr1_4:58367195-58367214 Msa0173150:intron 50.0%
AGCACCTATACACGTAGGCA+AGG + chr1_4:58367200-58367219 Msa0173150:intron 50.0%
! GGTGGGCATTTTTCTCGCTT+AGG - chr1_4:58367521-58367540 None:intergenic 50.0%
ACTCGCAAAGCTACAGCTGT+TGG + chr1_4:58367568-58367587 Msa0173150:CDS 50.0%
!! GCTGAAACCTTGTTCTAGGG+GGG - chr1_4:58367744-58367763 None:intergenic 50.0%
!! ACAGGCATGCTTGACTTGGT+CGG + chr1_4:58368546-58368565 Msa0173150:intron 50.0%
TTCAGTCATGATAGGCAGCC+CGG + chr1_4:58368604-58368623 Msa0173150:intron 50.0%
AAGGTCACGGGTTCAAGTAC+TGG - chr1_4:58368718-58368737 None:intergenic 50.0%
TCACGTGACTGAAAGGTCAC+GGG - chr1_4:58368730-58368749 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+CGG - chr1_4:58368731-58368750 None:intergenic 50.0%
ACAACTTTACCGTTGCGCCA+AGG + chr1_4:58368752-58368771 Msa0173150:intron 50.0%
!! GAATTTTAAAGGCGGGGCCT+TGG - chr1_4:58368772-58368791 None:intergenic 50.0%
AGACCGTAAGCAAGCACCAA+AGG - chr1_4:58368898-58368917 None:intergenic 50.0%
! ATCTGTCTTTCTGGTCCACC+AGG + chr1_4:58368969-58368988 Msa0173150:CDS 50.0%
!! ATACTCGTTTTTCCCACGCC+TGG - chr1_4:58368990-58369009 None:intergenic 50.0%
GGCGTGGGAAAAACGAGTAT+TGG + chr1_4:58368990-58369009 Msa0173150:CDS 50.0%
TCAAGGCCCGTGCAATTGAA+CGG - chr1_4:58369016-58369035 None:intergenic 50.0%
! AGGTGCTATGCCAGGAAAGA+TGG + chr1_4:58369201-58369220 Msa0173150:CDS 50.0%
! CCAGGAGAGCGTATACCAAA+GGG - chr1_4:58369348-58369367 None:intergenic 50.0%
! ACCAGGAGAGCGTATACCAA+AGG - chr1_4:58369349-58369368 None:intergenic 50.0%
TAGTTGGGCAAAGGACATGC+CGG + chr1_4:58369484-58369503 Msa0173150:intron 50.0%
! CAAAGCACTTGCTGGATCAC+CGG - chr1_4:58369506-58369525 None:intergenic 50.0%
! AGCTCTAGCAAAGCACTTGC+TGG - chr1_4:58369514-58369533 None:intergenic 50.0%
CCCATCGATCTATCGAAGGT+TGG + chr1_4:58369583-58369602 Msa0173150:intron 50.0%
GACCATGACAACTGATGCAC+TGG + chr1_4:58369717-58369736 Msa0173150:intron 50.0%
ATGCACTGGAATCATGCTGC+AGG + chr1_4:58369731-58369750 Msa0173150:intron 50.0%
TCCCCTATTGGATAGGATGG+AGG + chr1_4:58369797-58369816 Msa0173150:CDS 50.0%
AAAGGAACCCTGTAAACGGG+TGG - chr1_4:58369937-58369956 None:intergenic 50.0%
AGATAGCGCTACGACTTGTG+AGG + chr1_4:58370358-58370377 Msa0173150:intron 50.0%
! CACGGGGTTCCCTTTTTGAA+TGG - chr1_4:58370457-58370476 None:intergenic 50.0%
GATCAAAGATGCGCTCTGCA+TGG - chr1_4:58371100-58371119 None:intergenic 50.0%
GTTGAACAAGGGGACGGAAA+AGG + chr1_4:58371197-58371216 Msa0173150:CDS 50.0%
TTTCACCTCCATGTTCCTGC+AGG + chr1_4:58371344-58371363 Msa0173150:CDS 50.0%
TTCACCTCCATGTTCCTGCA+GGG + chr1_4:58371345-58371364 Msa0173150:CDS 50.0%
GGCAAGGGACAACATAGAAG+TGG - chr1_4:58371411-58371430 None:intergenic 50.0%
CACAGGCTTCTTCAAGGCAA+GGG - chr1_4:58371426-58371445 None:intergenic 50.0%
TCACAGGCTTCTTCAAGGCA+AGG - chr1_4:58371427-58371446 None:intergenic 50.0%
ACTGGGGAAGTGACACTTAC+AGG + chr1_4:58371464-58371483 Msa0173150:CDS 50.0%
CTGGGGAAGTGACACTTACA+GGG + chr1_4:58371465-58371484 Msa0173150:CDS 50.0%
GGGAAGATTCTTCCCATTGG+CGG + chr1_4:58371485-58371504 Msa0173150:CDS 50.0%
GGAAGATTCTTCCCATTGGC+GGG + chr1_4:58371486-58371505 Msa0173150:CDS 50.0%
GAAGATTCTTCCCATTGGCG+GGG + chr1_4:58371487-58371506 Msa0173150:CDS 50.0%
!! GGTCACTGGTTTCCAAGTTC+TGG + chr1_4:58371581-58371600 Msa0173150:intron 50.0%
CGCTTCGCTTCCACCATCAA+TGG + chr1_4:58360907-58360926 Msa0173150:five_prime_UTR 55.0%
GGTTAAGCGGTGGATGCAAG+AGG - chr1_4:58361049-58361068 None:intergenic 55.0%
AAGAAGCGGAGATGCGGAGT+CGG - chr1_4:58361103-58361122 None:intergenic 55.0%
! AGTTTGGGGTCCTGGATGCA+TGG - chr1_4:58362695-58362714 None:intergenic 55.0%
! CTGCCAATAGTTTGGGGTCC+TGG - chr1_4:58362703-58362722 None:intergenic 55.0%
GATCGACAAGCCCCTTATGC+TGG + chr1_4:58362740-58362759 Msa0173150:CDS 55.0%
!! GAGGAAGGCACCAGCATAAG+GGG - chr1_4:58362753-58362772 None:intergenic 55.0%
!! GGAGGAAGGCACCAGCATAA+GGG - chr1_4:58362754-58362773 None:intergenic 55.0%
!! AGGAGGAAGGCACCAGCATA+AGG - chr1_4:58362755-58362774 None:intergenic 55.0%
GCAGACGTCGATGACCAATC+AGG - chr1_4:58363040-58363059 None:intergenic 55.0%
GGAACATGGGAATGGGGAAG+GGG + chr1_4:58363559-58363578 Msa0173150:intron 55.0%
CTAGTGTGAGGATGCAGGAG+GGG + chr1_4:58363968-58363987 Msa0173150:intron 55.0%
TAGTGTGAGGATGCAGGAGG+GGG + chr1_4:58363969-58363988 Msa0173150:intron 55.0%
AAGGGCTTAGGGTTGACCCT+TGG - chr1_4:58364029-58364048 None:intergenic 55.0%
!! GTATGGTGCAGAGTGTTGGG+AGG + chr1_4:58364487-58364506 Msa0173150:intron 55.0%
! GCTACACCAGTCTTTTGGGC+AGG - chr1_4:58367183-58367202 None:intergenic 55.0%
CGCAAAGCTACAGCTGTTGG+AGG + chr1_4:58367571-58367590 Msa0173150:CDS 55.0%
ACTGGTTGACTGCACTGCCT+TGG + chr1_4:58367633-58367652 Msa0173150:CDS 55.0%
CTGGTTGACTGCACTGCCTT+GGG + chr1_4:58367634-58367653 Msa0173150:CDS 55.0%
TGGTTGACTGCACTGCCTTG+GGG + chr1_4:58367635-58367654 Msa0173150:CDS 55.0%
CACTGCCTTGGGGTGAATAC+AGG + chr1_4:58367645-58367664 Msa0173150:CDS 55.0%
!! CAGGCATGCTTGACTTGGTC+GGG + chr1_4:58368547-58368566 Msa0173150:intron 55.0%
CAATTGGTGGGATCCCTTCC+CGG - chr1_4:58368648-58368667 None:intergenic 55.0%
CCCTTTGGTATACGCTCTCC+TGG + chr1_4:58369345-58369364 Msa0173150:intron 55.0%
TAGCATTCTGCTCGGGGTCT+AGG - chr1_4:58369537-58369556 None:intergenic 55.0%
CAGAGAGATTGATCTGCCGG+TGG - chr1_4:58370546-58370565 None:intergenic 55.0%
ATGCGCTCTGCATGGAAGAC+AGG - chr1_4:58371092-58371111 None:intergenic 55.0%
GCGTTGTTATGGGACTTGCC+TGG + chr1_4:58371132-58371151 Msa0173150:CDS 55.0%
GGACTTGCCTGGACTGCAAT+GGG + chr1_4:58371143-58371162 Msa0173150:CDS 55.0%
TCACCTCCATGTTCCTGCAG+GGG + chr1_4:58371346-58371365 Msa0173150:CDS 55.0%
CCAGCACTTGGTCCATCCTT+TGG - chr1_4:58371377-58371396 None:intergenic 55.0%
CCAAAGGATGGACCAAGTGC+TGG + chr1_4:58371374-58371393 Msa0173150:CDS 55.0%
GTCATCGTGCAACCAGCACT+TGG - chr1_4:58371389-58371408 None:intergenic 55.0%
!! TGATGGTGGAAGCGAAGCGG+AGG - chr1_4:58360906-58360925 None:intergenic 60.0%
!! AAAGGCGCTTCGTAGGCCAC+TGG + chr1_4:58365388-58365407 Msa0173150:intron 60.0%
AACGCAGCCCCCCTAGAACA+AGG + chr1_4:58367734-58367753 Msa0173150:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG - chr1_4:58368632-58368651 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG - chr1_4:58368633-58368652 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG + chr1_4:58368632-58368651 Msa0173150:intron 60.0%
! TCTTTCTGGTCCACCAGGCG+TGG + chr1_4:58368974-58368993 Msa0173150:CDS 60.0%
! CTTTCTGGTCCACCAGGCGT+GGG + chr1_4:58368975-58368994 Msa0173150:CDS 60.0%
!! CTCGTTTTTCCCACGCCTGG+TGG - chr1_4:58368987-58369006 None:intergenic 60.0%
GCTACGACTTGTGAGGCACG+TGG + chr1_4:58370365-58370384 Msa0173150:CDS 60.0%
GGGACTTGCCTGGACTGCAA+TGG + chr1_4:58371142-58371161 Msa0173150:CDS 60.0%
CTTGCCTGGACTGCAATGGG+CGG + chr1_4:58371146-58371165 Msa0173150:CDS 60.0%
TAGCCCCTGCAGGAACATGG+AGG - chr1_4:58371352-58371371 None:intergenic 60.0%
GTGTAGCCCCTGCAGGAACA+TGG - chr1_4:58371355-58371374 None:intergenic 60.0%
TCCTGCAGGGGCTACACCAA+AGG + chr1_4:58371358-58371377 Msa0173150:CDS 60.0%
! TCCTTTGGTGTAGCCCCTGC+AGG - chr1_4:58371362-58371381 None:intergenic 60.0%
GCAGGGGCTACACCAAAGGA+TGG + chr1_4:58371362-58371381 Msa0173150:CDS 60.0%
TCGGATGCCGGTCGGAGAAC+CGG - chr1_4:58361084-58361103 None:intergenic 65.0%
ATGCGGAGTCGGATGCCGGT+CGG - chr1_4:58361092-58361111 None:intergenic 65.0%
GGAGATGCGGAGTCGGATGC+CGG - chr1_4:58361096-58361115 None:intergenic 65.0%
TCGGAGTCGGAATCCGGCGA+CGG + chr1_4:58361192-58361211 Msa0173150:CDS 65.0%
CACATGATCGGGTCCGTCGC+CGG - chr1_4:58361208-58361227 None:intergenic 65.0%
ACCCTGCATATGCGGGCACC+GGG - chr1_4:58368625-58368644 None:intergenic 65.0%
GACCCTGCATATGCGGGCAC+CGG - chr1_4:58368626-58368645 None:intergenic 65.0%
GTGCCCGCATATGCAGGGTC+CGG + chr1_4:58368626-58368645 Msa0173150:intron 65.0%
TGCCCGCATATGCAGGGTCC+GGG + chr1_4:58368627-58368646 Msa0173150:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG + chr1_4:58368631-58368650 Msa0173150:intron 65.0%
GGATCCGCCCATTGCAGTCC+AGG - chr1_4:58371153-58371172 None:intergenic 65.0%
GAACCGCGGCGGGGGTTAAG+CGG - chr1_4:58361062-58361081 None:intergenic 70.0%
CTTAACCCCCGCCGCGGTTC+CGG + chr1_4:58361062-58361081 Msa0173150:CDS 70.0%
TCGGAGAACCGGAACCGCGG+CGG - chr1_4:58361073-58361092 None:intergenic 70.0%
CGGTCGGAGAACCGGAACCG+CGG - chr1_4:58361076-58361095 None:intergenic 70.0%
CGCGGTTCCGGTTCTCCGAC+CGG + chr1_4:58361074-58361093 Msa0173150:CDS 70.0%
CGGCGACGGACCCGATCATG+TGG + chr1_4:58361206-58361225 Msa0173150:CDS 70.0%
GGGGGGCTGCGTTCTCCATG+AGG - chr1_4:58367727-58367746 None:intergenic 70.0%
AGCCCGGTGCCCGCATATGC+AGG + chr1_4:58368620-58368639 Msa0173150:intron 70.0%
GCCCGGTGCCCGCATATGCA+GGG + chr1_4:58368621-58368640 Msa0173150:intron 70.0%
AAGGCGGGGCCTTGGCGCAA+CGG - chr1_4:58368764-58368783 None:intergenic 70.0%
CCACCGCTTAACCCCCGCCG+CGG + chr1_4:58361056-58361075 Msa0173150:CDS 75.0%
GAGAACCGGAACCGCGGCGG+GGG - chr1_4:58361070-58361089 None:intergenic 75.0%
GGAGAACCGGAACCGCGGCG+GGG - chr1_4:58361071-58361090 None:intergenic 75.0%
CGGAGAACCGGAACCGCGGC+GGG - chr1_4:58361072-58361091 None:intergenic 75.0%
! CCGCGGCGGGGGTTAAGCGG+TGG - chr1_4:58361059-58361078 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_4 gene 58360750 58372360 58360750 ID=Msa0173150;Name=Msa0173150
chr1_4 mRNA 58360750 58372360 58360750 ID=Msa0173150-mRNA-1;Parent=Msa0173150;Name=Msa0173150-mRNA-1;_AED=0.19;_eAED=0.19;_QI=277|0.94|0.95|1|1|1|20|358|973
chr1_4 exon 58360750 58361323 58360750 ID=Msa0173150-mRNA-1:exon:18045;Parent=Msa0173150-mRNA-1
chr1_4 exon 58362364 58362429 58362364 ID=Msa0173150-mRNA-1:exon:18046;Parent=Msa0173150-mRNA-1
chr1_4 exon 58362704 58362895 58362704 ID=Msa0173150-mRNA-1:exon:18047;Parent=Msa0173150-mRNA-1
chr1_4 exon 58363008 58363073 58363008 ID=Msa0173150-mRNA-1:exon:18048;Parent=Msa0173150-mRNA-1
chr1_4 exon 58363241 58363267 58363241 ID=Msa0173150-mRNA-1:exon:18049;Parent=Msa0173150-mRNA-1
chr1_4 exon 58363400 58363522 58363400 ID=Msa0173150-mRNA-1:exon:18050;Parent=Msa0173150-mRNA-1
chr1_4 exon 58366091 58366189 58366091 ID=Msa0173150-mRNA-1:exon:18051;Parent=Msa0173150-mRNA-1
chr1_4 exon 58366347 58366412 58366347 ID=Msa0173150-mRNA-1:exon:18052;Parent=Msa0173150-mRNA-1
chr1_4 exon 58366497 58366583 58366497 ID=Msa0173150-mRNA-1:exon:18053;Parent=Msa0173150-mRNA-1
chr1_4 exon 58367092 58367131 58367092 ID=Msa0173150-mRNA-1:exon:18054;Parent=Msa0173150-mRNA-1
chr1_4 exon 58367495 58367666 58367495 ID=Msa0173150-mRNA-1:exon:18055;Parent=Msa0173150-mRNA-1
chr1_4 exon 58368079 58368203 58368079 ID=Msa0173150-mRNA-1:exon:18056;Parent=Msa0173150-mRNA-1
chr1_4 exon 58368961 58369091 58368961 ID=Msa0173150-mRNA-1:exon:18057;Parent=Msa0173150-mRNA-1
chr1_4 exon 58369181 58369285 58369181 ID=Msa0173150-mRNA-1:exon:18058;Parent=Msa0173150-mRNA-1
chr1_4 exon 58369487 58369600 58369487 ID=Msa0173150-mRNA-1:exon:18059;Parent=Msa0173150-mRNA-1
chr1_4 exon 58369753 58369920 58369753 ID=Msa0173150-mRNA-1:exon:18060;Parent=Msa0173150-mRNA-1
chr1_4 exon 58370056 58370157 58370056 ID=Msa0173150-mRNA-1:exon:18061;Parent=Msa0173150-mRNA-1
chr1_4 exon 58370360 58370593 58370360 ID=Msa0173150-mRNA-1:exon:18062;Parent=Msa0173150-mRNA-1
chr1_4 exon 58370993 58371508 58370993 ID=Msa0173150-mRNA-1:exon:18063;Parent=Msa0173150-mRNA-1
chr1_4 exon 58371811 58372360 58371811 ID=Msa0173150-mRNA-1:exon:18064;Parent=Msa0173150-mRNA-1
chr1_4 five_prime_UTR 58360750 58361026 58360750 ID=Msa0173150-mRNA-1:five_prime_utr;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58361027 58361323 58361027 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58362364 58362429 58362364 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58362704 58362895 58362704 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58363008 58363073 58363008 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58363241 58363267 58363241 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58363400 58363522 58363400 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58366091 58366189 58366091 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58366347 58366412 58366347 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58366497 58366583 58366497 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58367092 58367131 58367092 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58367495 58367666 58367495 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58368079 58368203 58368079 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58368961 58369091 58368961 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58369181 58369285 58369181 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58369487 58369600 58369487 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58369753 58369920 58369753 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58370056 58370157 58370056 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58370360 58370593 58370360 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58370993 58371508 58370993 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 CDS 58371811 58372002 58371811 ID=Msa0173150-mRNA-1:cds;Parent=Msa0173150-mRNA-1
chr1_4 three_prime_UTR 58372003 58372360 58372003 ID=Msa0173150-mRNA-1:three_prime_utr;Parent=Msa0173150-mRNA-1
Gene Sequence

>Msa0173150

ATGTTGAAGCTCATTTCATCCTCTTGCATCCACCGCTTAACCCCCGCCGCGGTTCCGGTTCTCCGACCGGCATCCGACTCCGCATCTCCGCTTCTTAGAGTTTTGAATTCTCTCAGCGGATTGAGTCGGAGTCATCGTTATTTGGGAGGGAGAGTATTTTTCTGTTCGGAGTCGGAATCCGGCGACGGACCCGATCATGTGGTTGATGCTGAAGCTAAAGCAGCTGAGGAAACTCCGTCAAAGGCTGCTTCTTCTGCTATTGTCTCCACTTATCCCAGACCTGAAGATTACCTCACTGTTTTGGCTTTGCCGTTGCAACATAGACCTCTTTTCCCAGGATTTTACATGCCAATTTTTGTTAAGGACCCCAAACTATTGGCAGCTTTACAGGAAAGTCGAGATCGACAAGCCCCTTATGCTGGTGCCTTCCTCCTTAAAGATGAGCCAGACTCTGATCCCAATGTAGTATCTAGCTCTGACACAGAAAAGAGTGTATATGATTTAAAAGGAAAAGAGTTGTTTAACCGTCTTCATGAAGTTGGGACTCTTGCCCAAATTTCAAGTATCCATGGGGATCAAGTGATCCTGATTGGTCATCGACGTCTGCGCATAACAGATATGGTTAGCGAGGACCCGCTTACTGTAAAAGATAAAGCTTATAACAAAGATGATGACATCATAAAGGCCACATCTTTCGAGGTCATATCAACACTAAGGGACGTTCTTAAAACAAGTTCTCTTTGGAGAGATCATGTTGCGACTTACTCTAAGCATATAGGTGATTTTACATATCCAAGGCTAGCAGATTTTGGAGCTGCAATATCTGGGGCTAACAAATTGCAATGCCAACAAGTTCTTGAAGAGCTAGATGTGTATAAACGATTGAAACTTACACTCGAGTTGGTAAAGAAAGAGATGGAAATCAGTAAGATTCAGGAAACAATTGCGAAAGCAATTGAAGAAAAGATAAGTGGTGAGCAGCGCCGTTATTTGTTAAATGAGCAGCTTAAGGCCATAAAGAAGGAATTGGGACTGGAGACTGACGACAAGACAGCACTTACAGGTAAATTCAGGGAAAGGATTGAACCTAAGCGAGAAAAATGCCCACCTCATGTGTTACAAGTTATAGACGAGGAACTCGCAAAGCTACAGCTGTTGGAGGCTAGTTCTAGTGAATTCAGTGTTACCCGTAACTACTTGGACTGGTTGACTGCACTGCCTTGGGGTGAATACAGTGATGAGAACTTTCATGTCACTCGAGCACAAAAGATTCTTGATGAAGACCATTACGGATTAACTGATGTGAAGGAAAGAATATTGGAATTCATAGCTGTTGGGAAATTGAGAGGGACTTCACAAGGAAAAATTATCTGTCTTTCTGGTCCACCAGGCGTGGGAAAAACGAGTATTGGCCGTTCAATTGCACGGGCCTTGAACCGTAAGTTCTTCCGATTCTCTGTTGGAGGATTAGCTGATGTGGCTGAAATCAAGGGGCATCGTCGAACATATATAGGTGCTATGCCAGGAAAGATGGTACAATGCCTTAAGAATGTGGGAACAGCCAATCCTCTTGTATTGATTGATGAAATTGACAAATTGGGCAAAGGACATGCCGGTGATCCAGCAAGTGCTTTGCTAGAGCTCCTAGACCCCGAGCAGAATGCTAATTTTCTGGACCACTATCTTGATGTTCCCATCGATCTATCGAAGGTTCTTTTTGTTTGCACTGCAAATGTAGTGGAGATGATACCAAATCCCCTATTGGATAGGATGGAGGTTGTTACTATTGCTGGGTATATTGCTGATGAGAAAATGCACATTGCAAGAGATTATCTGGAGAAAACTACACGTGAAGCATGTGGAATAAAGCCGGAACAAGTGGAGGTGACTGATGCTGCTCTTCTTGCTCTAATAGAAAACTATTGCCGAGAATCAGGAGTCAGAAACCTTCAAAAGCACATAGAAAAAATTTACCGGAAGATAGCGCTACGACTTGTGAGGCACGTGGAAACAAATGATGATGCTATTGAACCAAAGAAAGCTGAAGAAGATTTTGATGAAACGGGTACTACTACCATTCAAAAAGGGAACCCCGTGTTGATAGAGAGTAGCAATCCTGAACATACCGATGAAAACTCTAAACTTGATGAGATGAACACAAATCCACCGGCAGATCAATCTCTCTGTGTTGACGATAAATCTACAGATATTGAGGTTACAAAAGAAAGAGAGGAAGATAAGGAAACTGAATCGAAGACTGTTGAGAAGGTATTAATTGATAAATCGAATTTAGATGATTTTGTTGGCAAGCCTGTCTTCCATGCAGAGCGCATCTTTGATCAAACACCTATTGGCGTTGTTATGGGACTTGCCTGGACTGCAATGGGCGGATCCACACTGTATATAGAGACTAAATCTGTTGAACAAGGGGACGGAAAAGGAGCATTGCATATCACCGGTCAATTAGGAGATGTAATGAAAGAAAGTGCTCAACTAGCTCACACAATTGCCAGAGATATACTACGGGAGAAAGAACCAGAAAACGCTTTCTTTGCCAATACAAAGTTTCACCTCCATGTTCCTGCAGGGGCTACACCAAAGGATGGACCAAGTGCTGGTTGCACGATGACCACTTCTATGTTGTCCCTTGCCTTGAAGAAGCCTGTGAAGAAGGATCTAGCAATGACTGGGGAAGTGACACTTACAGGGAAGATTCTTCCCATTGGCGGGGTTAAGGAGAAAACTATTGCTGCAAGAAGGAGTGAGGTTAAGACTATAATATTTCCTTCGGCAAATAAGAGAGATTTTGATGAGCTAGCACCTAATGTAAAAGAAGGTCTCGAAGTGCACTTTGTTGATGACTATATGCAGATCTTTGATTTGGCTTTTGGTGATGAGAAATCTCACAATGCAGAGAAGTAA
Protein sequence

>Msa0173150

MLKLISSSCIHRLTPAAVPVLRPASDSASPLLRVLNSLSGLSRSHRYLGGRVFFCSESESGDGPDHVVDAEAKAAEETPSKAASSAIVSTYPRPEDYLTVLALPLQHRPLFPGFYMPIFVKDPKLLAALQESRDRQAPYAGAFLLKDEPDSDPNVVSSSDTEKSVYDLKGKELFNRLHEVGTLAQISSIHGDQVILIGHRRLRITDMVSEDPLTVKDKAYNKDDDIIKATSFEVISTLRDVLKTSSLWRDHVATYSKHIGDFTYPRLADFGAAISGANKLQCQQVLEELDVYKRLKLTLELVKKEMEISKIQETIAKAIEEKISGEQRRYLLNEQLKAIKKELGLETDDKTALTGKFRERIEPKREKCPPHVLQVIDEELAKLQLLEASSSEFSVTRNYLDWLTALPWGEYSDENFHVTRAQKILDEDHYGLTDVKERILEFIAVGKLRGTSQGKIICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLADVAEIKGHRRTYIGAMPGKMVQCLKNVGTANPLVLIDEIDKLGKGHAGDPASALLELLDPEQNANFLDHYLDVPIDLSKVLFVCTANVVEMIPNPLLDRMEVVTIAGYIADEKMHIARDYLEKTTREACGIKPEQVEVTDAALLALIENYCRESGVRNLQKHIEKIYRKIALRLVRHVETNDDAIEPKKAEEDFDETGTTTIQKGNPVLIESSNPEHTDENSKLDEMNTNPPADQSLCVDDKSTDIEVTKEREEDKETESKTVEKVLIDKSNLDDFVGKPVFHAERIFDQTPIGVVMGLAWTAMGGSTLYIETKSVEQGDGKGALHITGQLGDVMKESAQLAHTIARDILREKEPENAFFANTKFHLHVPAGATPKDGPSAGCTMTTSMLSLALKKPVKKDLAMTGEVTLTGKILPIGGVKEKTIAARRSEVKTIIFPSANKRDFDELAPNVKEGLEVHFVDDYMQIFDLAFGDEKSHNAEK*