AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0080510

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0080510 MtrunA17_Chr1g0192761 94.801 981 33 4 1 967 1 977 0.0 1864
Msa0080510 MtrunA17_Chr4g0055151 38.369 748 398 13 218 957 184 876 1.84e-154 478
Msa0080510 MtrunA17_Chr5g0400081 38.831 770 396 18 205 957 161 872 9.09e-149 463
Msa0080510 MtrunA17_Chr1g0192711 93.548 186 10 1 782 967 1 184 1.02e-116 355
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0080510 AT5G26860.1 71.122 980 227 8 1 964 46 985 0.0 1372
Msa0080510 AT3G05790.2 66.496 979 256 16 1 958 1 928 0.0 1240
Msa0080510 AT3G05790.1 65.758 990 256 17 1 958 1 939 0.0 1231
Msa0080510 AT3G05780.1 60.062 974 255 15 19 957 46 920 0.0 1100
Msa0080510 AT5G47040.1 37.584 745 408 10 218 957 183 875 1.08e-144 453
Msa0080510 AT3G05775.1 51.079 139 43 3 347 485 18 131 1.72e-38 140

Find 264 sgRNAs with CRISPR-Local

Find 803 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AAGGATATTTACCTTCTTTA+TGG 0.118362 1_2:+58756639 None:intergenic
TATTTATTCAAATTTATATT+TGG 0.174457 1_2:-58750592 Msa0080510:three_prime_UTR
TATCCAAGGCTAGCAGATTT+TGG 0.196088 1_2:-58757103 Msa0080510:CDS
CAAACTATTGGCAGCTTTAC+AGG 0.199476 1_2:-58760389 Msa0080510:CDS
CAGATCTTTGATTTGGCTTT+TGG 0.207377 1_2:-58750839 Msa0080510:CDS
GAGTCGGAGTCATCGTTATT+TGG 0.208456 1_2:-58761928 Msa0080510:CDS
CAGAGTCTGGCTCATCTTTA+AGG 0.209228 1_2:+58760326 None:intergenic
GGTACTACTACCATTCAAAA+AGG 0.243783 1_2:-58752767 Msa0080510:CDS
CGCGACAAGAAAGGAAAATT+TGG 0.248028 1_2:-58762305 Msa0080510:five_prime_UTR
ATTCATCTTGTCCCGTGTTC+AGG 0.256690 1_2:-58750673 Msa0080510:three_prime_UTR
AAGAGTGGCGTGTTCGATTC+TGG 0.263849 1_2:+58762203 None:intergenic
AAATCTTCTTCAGCTTTCTT+TGG 0.265036 1_2:+58752800 None:intergenic
CTGGTTGACTGCACTGCCTT+GGG 0.267506 1_2:-58755575 Msa0080510:CDS
ATGAGCTTCAACATTGGATT+AGG 0.279204 1_2:+58762059 None:intergenic
AACACCTATTGGCGTTGTTA+TGG 0.279528 1_2:-58751667 Msa0080510:CDS
TTCTTAAAACAAGTTCTCTT+TGG 0.287368 1_2:-58759625 Msa0080510:CDS
ACAAGCAAGAAAGGACATTT+TGG 0.292654 1_2:-58762274 Msa0080510:five_prime_UTR
ACTGGGGAAGTGACACTTAC+AGG 0.295346 1_2:-58751324 Msa0080510:CDS
CTATATGCAGATCTTTGATT+TGG 0.296609 1_2:-58750846 Msa0080510:CDS
ATGGAGGTTGTTACTATTGC+TGG 0.307211 1_2:-58753398 Msa0080510:CDS
CTGTAAAGCTGCCAATAGTT+TGG 0.307431 1_2:+58760390 None:intergenic
AAGAGTGTATATGATTTAAA+AGG 0.309568 1_2:-58760271 Msa0080510:CDS
TGTAAAGCTGCCAATAGTTT+GGG 0.309772 1_2:+58760391 None:intergenic
CAACATTGGATTAGGGGATT+AGG 0.310764 1_2:+58762067 None:intergenic
ATCCTATCCAATAGGGGATT+TGG 0.313473 1_2:+58753419 None:intergenic
GCACATTGCAAGAGATTATC+TGG 0.313888 1_2:-58753354 Msa0080510:CDS
ATCTTTGATCAAACACCTAT+TGG 0.323599 1_2:-58751678 Msa0080510:CDS
ACACCTATTGGCGTTGTTAT+GGG 0.332720 1_2:-58751666 Msa0080510:CDS
TCATGTTGCGACTTACTCTA+AGG 0.333632 1_2:-58759597 Msa0080510:intron
GATGGAAATCAGTAAGATTC+AGG 0.339212 1_2:-58756821 Msa0080510:intron
TTCTGTTCGGAGTCGGAATC+CGG 0.342934 1_2:-58761891 Msa0080510:CDS
TTGCATATCACCGGTCAATT+AGG 0.347116 1_2:-58751564 Msa0080510:CDS
CGGAGAACCGGAACCGCGGC+GGG 0.348037 1_2:+58762008 None:intergenic
TGAGCTTCAACATTGGATTA+GGG 0.350002 1_2:+58762060 None:intergenic
AGGCATTGTACCATCTTTCC+TGG 0.351046 1_2:+58754000 None:intergenic
GGTGAACGTGTGAATTGAAT+TGG 0.351436 1_2:+58762088 None:intergenic
GAAAACTATTGCCGAGAATC+AGG 0.352602 1_2:-58753119 Msa0080510:CDS
AGTCGGAGTCATCGTTATTT+GGG 0.352726 1_2:-58761927 Msa0080510:CDS
GACGACAAGACAGCACTTAC+AGG 0.353278 1_2:-58756101 Msa0080510:intron
AACCTCCATCCTATCCAATA+GGG 0.354645 1_2:+58753412 None:intergenic
CCAGCACTTGGTCCATCCTT+TGG 0.358352 1_2:+58751414 None:intergenic
CAGTGTTACCCGTAACTACT+TGG 0.360213 1_2:-58755599 Msa0080510:CDS
CAACCTCCATCCTATCCAAT+AGG 0.361697 1_2:+58753411 None:intergenic
TGATGTGAAGGAAAGAATAT+TGG 0.374667 1_2:-58755068 Msa0080510:CDS
ACTGGTTGACTGCACTGCCT+TGG 0.375558 1_2:-58755576 Msa0080510:CDS
TAGCATTCTGCTCGGGGTCT+AGG 0.389231 1_2:+58753677 None:intergenic
TGGCTGTTCCCACATTCTTA+AGG 0.390705 1_2:+58753980 None:intergenic
CACTGCCTTGGGGTGAATAC+AGG 0.393770 1_2:-58755564 Msa0080510:intron
TCAAATAAATAAAACATGTT+TGG 0.394825 1_2:+58750569 None:intergenic
AAAATTGGCATGTAAAATCC+TGG 0.395201 1_2:+58760698 None:intergenic
GATGATACCAAATCCCCTAT+TGG 0.398960 1_2:-58753426 Msa0080510:CDS
CCAGCTCTTCAAGAACTTGT+TGG 0.401875 1_2:+58757047 None:intergenic
GCAGAAGAAGCAGCCTTTGA+CGG 0.404688 1_2:+58761816 None:intergenic
TCGTTAATTGTGCAGCATAT+AGG 0.409197 1_2:-58757136 Msa0080510:intron
CTTCTTCACAGGCTTCTTCA+AGG 0.409313 1_2:+58751359 None:intergenic
AGCTCTAGCAAAGCACTTGC+TGG 0.410126 1_2:+58753700 None:intergenic
TTGTTCTATTTGCAGGAATT+GGG 0.411751 1_2:-58756134 Msa0080510:intron
AGGAGGAAGGCACCAGCATA+AGG 0.414304 1_2:+58760346 None:intergenic
TCGGATGCCGGTCGGAGAAC+CGG 0.421239 1_2:+58761996 None:intergenic
CATCCAGGACCCCAAACTAT+TGG 0.421388 1_2:-58760401 Msa0080510:intron
ATTCTTGATGAAGACCATTA+CGG 0.422676 1_2:-58755097 Msa0080510:CDS
TAAGACTATAATATTTCCTT+CGG 0.430379 1_2:-58750939 Msa0080510:CDS
AGTGAGGTAATCTTCAGGTC+TGG 0.432451 1_2:+58761776 None:intergenic
CGCTTCGCTTCCACCATCAA+TGG 0.432506 1_2:-58762170 Msa0080510:five_prime_UTR
AAAAGAAAGAGAGGAAGATA+AGG 0.435059 1_2:-58751790 Msa0080510:CDS
CGCGGTTCCGGTTCTCCGAC+CGG 0.435668 1_2:-58762003 Msa0080510:CDS
TTCTTCCGATTCTCTGTTGG+AGG 0.437637 1_2:-58754167 Msa0080510:CDS
TCCTTTGGTGTAGCCCCTGC+AGG 0.441469 1_2:+58751429 None:intergenic
CATTACATCTCCTAATTGAC+CGG 0.444442 1_2:+58751554 None:intergenic
GCTGCTCATTTAACAAATAA+CGG 0.445307 1_2:+58756668 None:intergenic
ACTACATTGGGATCAGAGTC+TGG 0.445698 1_2:+58760313 None:intergenic
GGATCCGCCCATTGCAGTCC+AGG 0.446975 1_2:+58751638 None:intergenic
CAAAGATGATGACATCATAA+AGG 0.451957 1_2:-58759684 Msa0080510:CDS
TTTGTTAAATGAGCAGCTTA+AGG 0.452656 1_2:-58756662 Msa0080510:CDS
TTTAACCGTCTTCATGAAGT+TGG 0.454685 1_2:-58760238 Msa0080510:CDS
GGAAGATTCTTCCCATTGGC+GGG 0.455433 1_2:-58751302 Msa0080510:CDS
GGGCATCGTCGAACATATAT+AGG 0.456607 1_2:-58754030 Msa0080510:CDS
TTTCTCCCGTAGTATATCTC+TGG 0.456893 1_2:+58751500 None:intergenic
GGACTTGCCTGGACTGCAAT+GGG 0.458484 1_2:-58751645 Msa0080510:CDS
ATGCGCTCTGCATGGAAGAC+AGG 0.461919 1_2:+58751699 None:intergenic
TCGGAAGAACTTACGGTTCA+AGG 0.462402 1_2:+58754181 None:intergenic
CCAACAGTGAGGTAATCTTC+AGG 0.462835 1_2:+58761771 None:intergenic
GGTTTCTGACTCCTGATTCT+CGG 0.463551 1_2:+58753108 None:intergenic
AGTCCCATAACAACGCCAAT+AGG 0.466901 1_2:+58751663 None:intergenic
TCAACCAGTCCAAGTAGTTA+CGG 0.467423 1_2:+58755590 None:intergenic
ATCAATCAATACAAGAGGAT+TGG 0.467735 1_2:+58753960 None:intergenic
CACATGATCGGGTCCGTCGC+CGG 0.469622 1_2:+58761872 None:intergenic
ATTCAGTTCCGCGACAAGAA+AGG 0.470383 1_2:-58762314 Msa0080510:five_prime_UTR
GTGAGGTAATCTTCAGGTCT+GGG 0.470829 1_2:+58761777 None:intergenic
AGAAAATTAGCATTCTGCTC+GGG 0.472974 1_2:+58753670 None:intergenic
TTTCACCTCCATGTTCCTGC+AGG 0.474314 1_2:-58751444 Msa0080510:CDS
ACGTCTGCGCATAACAGATA+TGG 0.474819 1_2:-58760046 Msa0080510:intron
AAGATATTTAGAGAATTGAA+TGG 0.477254 1_2:+58762125 None:intergenic
AGCTGATGTGGCTGAAATCA+AGG 0.477589 1_2:-58754141 Msa0080510:intron
ATCTTCAGGTCTGGGATAAG+TGG 0.477893 1_2:+58761785 None:intergenic
ATGGAGGTGAAACTTTGTAT+TGG 0.479069 1_2:+58751455 None:intergenic
CAGAGAATCGGAAGAACTTA+CGG 0.479231 1_2:+58754174 None:intergenic
GGAGGAAGGCACCAGCATAA+GGG 0.480370 1_2:+58760347 None:intergenic
CGCAAAGCTACAGCTGTTGG+AGG 0.483633 1_2:-58755638 Msa0080510:CDS
TTAACCGTCTTCATGAAGTT+GGG 0.483727 1_2:-58760237 Msa0080510:CDS
TTCATCTTGTCCCGTGTTCA+GGG 0.483981 1_2:-58750672 Msa0080510:three_prime_UTR
TTCACCTCCATGTTCCTGCA+GGG 0.487052 1_2:-58751443 Msa0080510:CDS
CAACCAGTCCAAGTAGTTAC+GGG 0.489175 1_2:+58755591 None:intergenic
GATGAAATGAGCTTCAACAT+TGG 0.489422 1_2:+58762053 None:intergenic
CTATTTGCAGGAATTGGGAC+TGG 0.490136 1_2:-58756129 Msa0080510:intron
GTGAACGTGTGAATTGAATT+GGG 0.490666 1_2:+58762089 None:intergenic
TATTGGAATTCATAGCTGTT+GGG 0.491082 1_2:-58755051 Msa0080510:CDS
CTTGAAGAAGCCTGTGAAGA+AGG 0.492602 1_2:-58751358 Msa0080510:CDS
TCTTTCTGGTCCACCAGGCG+TGG 0.492953 1_2:-58754237 Msa0080510:CDS
ATCTGTCTTTCTGGTCCACC+AGG 0.496614 1_2:-58754242 Msa0080510:CDS
GGAGATGCGGAGTCGGATGC+CGG 0.497275 1_2:+58761984 None:intergenic
TACCAGATTTCAAGTATCCA+TGG 0.498537 1_2:-58760096 Msa0080510:intron
AAGAAGGATCTAGCAATGAC+TGG 0.500187 1_2:-58751342 Msa0080510:CDS
AAGTTCTTCCGATTCTCTGT+TGG 0.500807 1_2:-58754170 Msa0080510:CDS
GCAGACGTCGATGACCAATC+AGG 0.501261 1_2:+58760061 None:intergenic
TTCAGCATCAACCACATGAT+CGG 0.501309 1_2:+58761860 None:intergenic
CCAACAAGTTCTTGAAGAGC+TGG 0.502222 1_2:-58757047 Msa0080510:CDS
GCTCCAAAATCTGCTAGCCT+TGG 0.502465 1_2:+58757100 None:intergenic
TTTCAGGTAAATTCAGGGAA+AGG 0.503118 1_2:-58755720 Msa0080510:intron
GATCGACAAGCCCCTTATGC+TGG 0.504477 1_2:-58760358 Msa0080510:CDS
GAGAACCGGAACCGCGGCGG+GGG 0.505635 1_2:+58762010 None:intergenic
GGGACTTGCCTGGACTGCAA+TGG 0.506970 1_2:-58751646 Msa0080510:CDS
ATTGCTAGATCCTTCTTCAC+AGG 0.508073 1_2:+58751348 None:intergenic
ACTCGCAAAGCTACAGCTGT+TGG 0.510817 1_2:-58755641 Msa0080510:CDS
GCGTTGTTATGGGACTTGCC+TGG 0.510909 1_2:-58751656 Msa0080510:CDS
CTAATCCTCCAACAGAGAAT+CGG 0.510914 1_2:+58754162 None:intergenic
GTGGCGATAACCACCATTGA+TGG 0.511996 1_2:+58762157 None:intergenic
GTTGAACAAGGGGACGGAAA+AGG 0.512423 1_2:-58751591 Msa0080510:CDS
TTCAATTGATAGTTGGGCAA+AGG 0.515247 1_2:-58753736 Msa0080510:intron
GGGGATCAAGTGATCCTGAT+TGG 0.515553 1_2:-58760075 Msa0080510:CDS
AGATATTTAGAGAATTGAAT+GGG 0.516776 1_2:+58762126 None:intergenic
GTAGGTTACAAAAGAAAGAG+AGG 0.517536 1_2:-58751799 Msa0080510:intron
AGGTGCTATGCCAGGAAAGA+TGG 0.518171 1_2:-58754010 Msa0080510:CDS
CGATGGGAACATCAAGATAG+TGG 0.518244 1_2:+58753644 None:intergenic
ATGTAAAATCCTGGGAAAAG+AGG 0.521237 1_2:+58760707 None:intergenic
TCAGCATCAACCACATGATC+GGG 0.521329 1_2:+58761861 None:intergenic
TCAGAGCTAGATACTACATT+GGG 0.523442 1_2:+58760301 None:intergenic
AAATCCCCTATTGGATAGGA+TGG 0.523871 1_2:-58753417 Msa0080510:CDS
ATATTGGAATTCATAGCTGT+TGG 0.524360 1_2:-58755052 Msa0080510:CDS
CGATAAATCTACAGATATTG+AGG 0.524661 1_2:-58752639 Msa0080510:intron
TCGGAGAACCGGAACCGCGG+CGG 0.525377 1_2:+58762007 None:intergenic
TCGAGGTCATATCAACACTA+AGG 0.526191 1_2:-58759652 Msa0080510:CDS
TCACAGGCTTCTTCAAGGCA+AGG 0.527647 1_2:+58751364 None:intergenic
TTTCAACATACCCCGCCAAT+GGG 0.528178 1_2:+58751291 None:intergenic
GCAATTGAAGAAAAGATAAG+TGG 0.530216 1_2:-58756700 Msa0080510:CDS
ATTGAAACTTACACTCGAGT+TGG 0.530852 1_2:-58756854 Msa0080510:CDS
CTAGCACCTAATGTAAAAGA+AGG 0.533550 1_2:-58750893 Msa0080510:CDS
AGCTGAGGAAACTCCGTCAA+AGG 0.534058 1_2:-58761829 Msa0080510:CDS
GTGTAGCCCCTGCAGGAACA+TGG 0.534094 1_2:+58751436 None:intergenic
TCACATCAGTTAATCCGTAA+TGG 0.534207 1_2:+58755083 None:intergenic
GGAGAACCGGAACCGCGGCG+GGG 0.537227 1_2:+58762009 None:intergenic
TGGAGGTTGTTACTATTGCT+GGG 0.538931 1_2:-58753397 Msa0080510:CDS
CATAAAGGCCACATCTTTCG+AGG 0.539389 1_2:-58759669 Msa0080510:CDS
GGGAAGATTCTTCCCATTGG+CGG 0.539390 1_2:-58751303 Msa0080510:CDS
ACACAGAGAGATTGATCTGC+CGG 0.541557 1_2:+58752665 None:intergenic
CAGAAAATTAGCATTCTGCT+CGG 0.543929 1_2:+58753669 None:intergenic
CCAAAGGATGGACCAAGTGC+TGG 0.544861 1_2:-58751414 Msa0080510:CDS
ACCAACCTTCGATAGATCGA+TGG 0.546134 1_2:+58753627 None:intergenic
GGATAGACGAGGGTTTATGA+AGG 0.547445 1_2:-58762245 Msa0080510:five_prime_UTR
GAGAAGTAAATCACTAATGC+CGG 0.548477 1_2:-58750794 Msa0080510:exon
AAGAAGCGGAGATGCGGAGT+CGG 0.548637 1_2:+58761977 None:intergenic
TATTGGCCGTTCAATTGCAC+GGG 0.548721 1_2:-58754204 Msa0080510:CDS
GGTACAATGCCTTAAGAATG+TGG 0.549700 1_2:-58753989 Msa0080510:CDS
AAATCTCTCTTATTTGCCGA+AGG 0.551137 1_2:+58750923 None:intergenic
CACAGGCTTCTTCAAGGCAA+GGG 0.551692 1_2:+58751365 None:intergenic
ACAGGGAAGATTCTTCCCAT+TGG 0.553268 1_2:-58751306 Msa0080510:CDS
CTTTCTGGTCCACCAGGCGT+GGG 0.553340 1_2:-58754236 Msa0080510:CDS
ACCAGATTTCAAGTATCCAT+GGG 0.554863 1_2:-58760095 Msa0080510:intron
CAAAGCACTTGCTGGATCAC+CGG 0.556600 1_2:+58753708 None:intergenic
CTGGGGAAGTGACACTTACA+GGG 0.558048 1_2:-58751323 Msa0080510:CDS
AACTCTAAGAAGCGGAGATG+CGG 0.558089 1_2:+58761971 None:intergenic
GAGGAAGGCACCAGCATAAG+GGG 0.562567 1_2:+58760348 None:intergenic
CAATTGCCAGAGATATACTA+CGG 0.563266 1_2:-58751506 Msa0080510:CDS
GTCATCGTGCAACCAGCACT+TGG 0.567012 1_2:+58751402 None:intergenic
TCACCTCCATGTTCCTGCAG+GGG 0.567880 1_2:-58751442 Msa0080510:CDS
TGAAGCATGTGGAATAAAGC+CGG 0.570845 1_2:-58753318 Msa0080510:CDS
GAAAATTAGCATTCTGCTCG+GGG 0.572122 1_2:+58753671 None:intergenic
GCAGCTTAAGGCCATAAAGA+AGG 0.572516 1_2:-58756650 Msa0080510:intron
TCCTGCAGGGGCTACACCAA+AGG 0.573234 1_2:-58751430 Msa0080510:CDS
GACTAAATCTGTTGAACAAG+GGG 0.573898 1_2:-58751601 Msa0080510:CDS
CGAGTTGGTAAAGAAAGAGA+TGG 0.574235 1_2:-58756839 Msa0080510:CDS
TGGTTGACTGCACTGCCTTG+GGG 0.574302 1_2:-58755574 Msa0080510:CDS
GATAGACGAGGGTTTATGAA+GGG 0.574654 1_2:-58762244 Msa0080510:five_prime_UTR
ATTTCATCAATCAATACAAG+AGG 0.574893 1_2:+58753955 None:intergenic
CGGAGTCATCGTTATTTGGG+AGG 0.577310 1_2:-58761924 Msa0080510:CDS
GAGCTTCAACATTGGATTAG+GGG 0.578639 1_2:+58762061 None:intergenic
CTTGCCTGGACTGCAATGGG+CGG 0.579469 1_2:-58751642 Msa0080510:CDS
GTATTGGCCGTTCAATTGCA+CGG 0.579673 1_2:-58754205 Msa0080510:CDS
TGGCTCATCTTTAAGGAGGA+AGG 0.579983 1_2:+58760333 None:intergenic
ACATATATAGGTGCTATGCC+AGG 0.581505 1_2:-58754018 Msa0080510:CDS
GTTTCATCTCAAGATCCTAC+CGG 0.581968 1_2:+58750775 None:intergenic
AGAAAACTATTGCTGCAAGA+AGG 0.583435 1_2:-58750970 Msa0080510:CDS
TTCGCTTCCACCATCAATGG+TGG 0.583472 1_2:-58762167 Msa0080510:five_prime_UTR
TCAAGGCCCGTGCAATTGAA+CGG 0.585038 1_2:+58754198 None:intergenic
AAATTGGCATGTAAAATCCT+GGG 0.585606 1_2:+58760699 None:intergenic
AGAAGGATCTAGCAATGACT+GGG 0.587164 1_2:-58751341 Msa0080510:CDS
TTACCCGTAACTACTTGGAC+TGG 0.587817 1_2:-58755594 Msa0080510:CDS
ATAGCTGTTGGGAAATTGAG+AGG 0.587899 1_2:-58755040 Msa0080510:CDS
TGTTGGAGGATTAGCTGATG+TGG 0.590169 1_2:-58754153 Msa0080510:CDS
TGCTGAAGCTAAAGCAGCTG+AGG 0.591116 1_2:-58761844 Msa0080510:CDS
GGAGTCATCGTTATTTGGGA+GGG 0.592287 1_2:-58761923 Msa0080510:CDS
ATAACTTGTAACACATGAGG+TGG 0.593186 1_2:+58755673 None:intergenic
CGAGGTCATATCAACACTAA+GGG 0.595033 1_2:-58759651 Msa0080510:CDS
AAAGGAGCATTGCATATCAC+CGG 0.595784 1_2:-58751573 Msa0080510:CDS
GATCAAAGATGCGCTCTGCA+TGG 0.595860 1_2:+58751691 None:intergenic
GAATTCAAAACTCTAAGAAG+CGG 0.598158 1_2:+58761963 None:intergenic
TAGCTGTTGGGAAATTGAGA+GGG 0.598517 1_2:-58755039 Msa0080510:CDS
TCAGGATCACTTGATCCCCA+TGG 0.598561 1_2:+58760079 None:intergenic
TTACGGATTAACTGATGTGA+AGG 0.600376 1_2:-58755080 Msa0080510:CDS
TCGGAGTCGGAATCCGGCGA+CGG 0.603037 1_2:-58761885 Msa0080510:CDS
CCAACCTTCGATAGATCGAT+GGG 0.604425 1_2:+58753628 None:intergenic
GAAGATTCTTCCCATTGGCG+GGG 0.605198 1_2:-58751301 Msa0080510:intron
ATATAATACAAAACTCAGAC+CGG 0.605595 1_2:+58750729 None:intergenic
TGAATCGAAGACTGTTGAGA+AGG 0.606498 1_2:-58751763 Msa0080510:CDS
GGTTAAGCGGTGGATGCAAG+AGG 0.609761 1_2:+58762031 None:intergenic
GCGATAACCACCATTGATGG+TGG 0.609948 1_2:+58762160 None:intergenic
ATTCTCTCAGCGGATTGAGT+CGG 0.610901 1_2:-58761944 Msa0080510:CDS
GTCAGAGCTAGATACTACAT+TGG 0.612372 1_2:+58760300 None:intergenic
TACCAAATCCCCTATTGGAT+AGG 0.612747 1_2:-58753421 Msa0080510:CDS
GAGACTAAATCTGTTGAACA+AGG 0.612839 1_2:-58751603 Msa0080510:CDS
CGGCGACGGACCCGATCATG+TGG 0.613445 1_2:-58761871 Msa0080510:CDS
GCAGGGGCTACACCAAAGGA+TGG 0.614871 1_2:-58751426 Msa0080510:CDS
TGATGGTGGAAGCGAAGCGG+AGG 0.615181 1_2:+58762174 None:intergenic
AAAAGAGGTCTATGTTGCAA+CGG 0.615327 1_2:+58760722 None:intergenic
TTGCTACTCTCTATCAACAC+GGG 0.615994 1_2:+58752740 None:intergenic
TGTTTGCACTGCAAATGTAG+TGG 0.616187 1_2:-58753450 Msa0080510:CDS
GAGTCCCAACTTCATGAAGA+CGG 0.618939 1_2:+58760233 None:intergenic
ATGAGAACTTTCATGTCACT+CGG 0.619039 1_2:-58755128 Msa0080510:intron
ACCTCCATCCTATCCAATAG+GGG 0.626225 1_2:+58753413 None:intergenic
GTACAATGCCTTAAGAATGT+GGG 0.627193 1_2:-58753988 Msa0080510:CDS
TTGGTCATTTGGATAGACGA+GGG 0.627325 1_2:-58762255 Msa0080510:five_prime_UTR
GGCAAGGGACAACATAGAAG+TGG 0.633373 1_2:+58751380 None:intergenic
ATGCGGAGTCGGATGCCGGT+CGG 0.634475 1_2:+58761988 None:intergenic
TAGTTGGGCAAAGGACATGC+CGG 0.635078 1_2:-58753727 Msa0080510:CDS
AAGCGGAGGAAGAAGAAGAG+TGG 0.636088 1_2:+58762188 None:intergenic
TCCCCTATTGGATAGGATGG+AGG 0.636687 1_2:-58753414 Msa0080510:CDS
TGTTCCCATCGATCTATCGA+AGG 0.639058 1_2:-58753632 Msa0080510:intron
AAAACTACACGTGAAGCATG+TGG 0.641017 1_2:-58753329 Msa0080510:CDS
TGAGATGAACACAAATCCAC+CGG 0.643292 1_2:-58752684 Msa0080510:CDS
AAATTGAGAGGGACTTCACA+AGG 0.643864 1_2:-58755028 Msa0080510:intron
AAATCTGTTGAACAAGGGGA+CGG 0.651170 1_2:-58751597 Msa0080510:CDS
AGTAAATCACTAATGCCGGT+AGG 0.651252 1_2:-58750790 Msa0080510:exon
AGACTAAATCTGTTGAACAA+GGG 0.652455 1_2:-58751602 Msa0080510:CDS
TATTGCTGCAAGAAGGAGTG+AGG 0.652496 1_2:-58750963 Msa0080510:CDS
TTTGGTCATTTGGATAGACG+AGG 0.653553 1_2:-58762256 Msa0080510:five_prime_UTR
GTAAAGCTGCCAATAGTTTG+GGG 0.653963 1_2:+58760392 None:intergenic
TCTATAACTTGTAACACATG+AGG 0.655916 1_2:+58755670 None:intergenic
TTTAGTCTCTATATACAGTG+TGG 0.656615 1_2:+58751617 None:intergenic
CGGTCGGAGAACCGGAACCG+CGG 0.661798 1_2:+58762004 None:intergenic
TAACTTGTAACACATGAGGT+GGG 0.663798 1_2:+58755674 None:intergenic
ATTGCTACTCTCTATCAACA+CGG 0.665388 1_2:+58752739 None:intergenic
AATTGCCAGAGATATACTAC+GGG 0.666821 1_2:-58751505 Msa0080510:CDS
AGATAGCGCTACGACTTGTG+AGG 0.667785 1_2:-58752853 Msa0080510:CDS
CATTGATGGTGGAAGCGAAG+CGG 0.670697 1_2:+58762171 None:intergenic
CAGAGAGATTGATCTGCCGG+TGG 0.680139 1_2:+58752668 None:intergenic
AGTCTGGCTCATCTTTAAGG+AGG 0.681007 1_2:+58760329 None:intergenic
ACAAACCTGTATTCACCCCA+AGG 0.685382 1_2:+58755559 None:intergenic
TGATATGACCTCGAAAGATG+TGG 0.692394 1_2:+58759661 None:intergenic
TGCTACTCTCTATCAACACG+GGG 0.697572 1_2:+58752741 None:intergenic
GCTACGACTTGTGAGGCACG+TGG 0.709175 1_2:-58752846 Msa0080510:CDS
CCAGATTTCAAGTATCCATG+GGG 0.727231 1_2:-58760094 Msa0080510:intron
GAAGGATCTAGCAATGACTG+GGG 0.732838 1_2:-58751340 Msa0080510:CDS
TAGCCCCTGCAGGAACATGG+AGG 0.733655 1_2:+58751439 None:intergenic
TGTGTTACAAGTTATAGACG+AGG 0.751251 1_2:-58755665 Msa0080510:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAATTATTTTTTTAATTTA+TGG - chr1_2:58761516-58761535 Msa0080510:intron 0.0%
!! AAAAAAAATTATTATTCTTG+TGG - chr1_2:58751504-58751523 Msa0080510:CDS 10.0%
!! TGCTAAAATTAATTAAAAAA+TGG - chr1_2:58752766-58752785 Msa0080510:CDS 10.0%
!!! ACCTTTTTTTTTTTTTTAAA+CGG - chr1_2:58753491-58753510 Msa0080510:intron 10.0%
!! TTTATTTATTCTTAAACAAA+CGG - chr1_2:58754646-58754665 Msa0080510:intron 10.0%
!!! TTTAATAAGAGTATTTTATA+TGG - chr1_2:58755337-58755356 Msa0080510:intron 10.0%
!!! TTAATAAGAGTATTTTATAT+GGG - chr1_2:58755338-58755357 Msa0080510:intron 10.0%
!! ATATATAGAGAAAAAAAATT+GGG + chr1_2:58757982-58758001 None:intergenic 10.0%
!! TATATATAGAGAAAAAAAAT+TGG + chr1_2:58757983-58758002 None:intergenic 10.0%
!! ATAAAATTATAAATGTTCAA+TGG - chr1_2:58758000-58758019 Msa0080510:intron 10.0%
!!! TGAATTTTAAATAAATGAAT+TGG + chr1_2:58758438-58758457 None:intergenic 10.0%
!!! ATAATTACATATTTCTTTTT+CGG - chr1_2:58760381-58760400 Msa0080510:CDS 10.0%
!! TAAAATTTCTAATAAACAAA+TGG + chr1_2:58761661-58761680 None:intergenic 10.0%
!!! TTTTAATTTGATTGGAAAAT+GGG - chr1_2:58751115-58751134 Msa0080510:intron 15.0%
!!! GTGTTTTTTATTATAGATAT+AGG - chr1_2:58751194-58751213 Msa0080510:intron 15.0%
!!! TTTTCGATAAAATTATAATC+AGG + chr1_2:58751928-58751947 None:intergenic 15.0%
!! AAAAGTCAATAAAAGATAAA+AGG + chr1_2:58753044-58753063 None:intergenic 15.0%
!! ATTCAGAAACTAAAAATTAA+AGG + chr1_2:58753343-58753362 None:intergenic 15.0%
!! TCCGTTTAAAAAAAAAAAAA+AGG + chr1_2:58753495-58753514 None:intergenic 15.0%
!!! TCAAGATATCTTAATTTTTA+AGG + chr1_2:58753535-58753554 None:intergenic 15.0%
!! TTATTTATTCTTAAACAAAC+GGG - chr1_2:58754647-58754666 Msa0080510:intron 15.0%
!! CTTGTATTAACATATATAAT+AGG + chr1_2:58754976-58754995 None:intergenic 15.0%
!! ATTATATATGTTAATACAAG+AGG - chr1_2:58754976-58754995 Msa0080510:intron 15.0%
!! TTATATATGTTAATACAAGA+GGG - chr1_2:58754977-58754996 Msa0080510:intron 15.0%
!!! TTTGAATTTTTTCTATATGT+GGG - chr1_2:58756304-58756323 Msa0080510:intron 15.0%
!!! GTTATAATCTTTTTTTAAGA+TGG - chr1_2:58756701-58756720 Msa0080510:CDS 15.0%
!! AAAAAAAATAAAAACCAGTT+AGG + chr1_2:58756857-58756876 None:intergenic 15.0%
!!! TAACTGGTTTTTATTTTTTT+TGG - chr1_2:58756856-58756875 Msa0080510:CDS 15.0%
!!! TTAACTATACTTTTTATTTC+AGG - chr1_2:58757040-58757059 Msa0080510:intron 15.0%
!! ATAGCAATTTAATATATTAC+AGG - chr1_2:58758093-58758112 Msa0080510:intron 15.0%
!!! TTATAATGACTGAATTTTAA+AGG + chr1_2:58758348-58758367 None:intergenic 15.0%
!!! TCATTAATATTGAATTTTAC+AGG - chr1_2:58758724-58758743 Msa0080510:intron 15.0%
!!! CATTAATATTGAATTTTACA+GGG - chr1_2:58758725-58758744 Msa0080510:intron 15.0%
!!! ATTAATATTGAATTTTACAG+GGG - chr1_2:58758726-58758745 Msa0080510:intron 15.0%
!! ATTCATGCATTATATTTATT+AGG + chr1_2:58758937-58758956 None:intergenic 15.0%
!! CGTAAAAAATTTAACAAAAT+TGG + chr1_2:58758961-58758980 None:intergenic 15.0%
!! ATATTTATGTATGTTAATGT+TGG - chr1_2:58760955-58760974 Msa0080510:intron 15.0%
!! AATAAACAAATGGTATTTAT+TGG + chr1_2:58761651-58761670 None:intergenic 15.0%
!!! TTAAGATAAATTTTACAACT+GGG + chr1_2:58762164-58762183 None:intergenic 15.0%
!!! ATTAAGATAAATTTTACAAC+TGG + chr1_2:58762165-58762184 None:intergenic 15.0%
!! TCAAATAAATAAAACATGTT+TGG + chr1_2:58762210-58762229 None:intergenic 15.0%
!! AGATATTTAGAGAATTGAAT+GGG + chr1_2:58750653-58750672 None:intergenic 20.0%
!! AAGATATTTAGAGAATTGAA+TGG + chr1_2:58750654-58750673 None:intergenic 20.0%
!!! ATGTTACGTTTTAATTTGAT+TGG - chr1_2:58751107-58751126 Msa0080510:intron 20.0%
!!! GTTTTAATTTGATTGGAAAA+TGG - chr1_2:58751114-58751133 Msa0080510:intron 20.0%
!!! TTTAATTTGATTGGAAAATG+GGG - chr1_2:58751116-58751135 Msa0080510:intron 20.0%
!! TTGTTAAATAGTAGTTATAG+TGG - chr1_2:58751321-58751340 Msa0080510:CDS 20.0%
!! AATAATAAATACTTGGTTGT+AGG + chr1_2:58751472-58751491 None:intergenic 20.0%
!! AGGAAAGAATAATAAATACT+TGG + chr1_2:58751479-58751498 None:intergenic 20.0%
!!! TCTATTGATAATATAATCAG+AGG + chr1_2:58751845-58751864 None:intergenic 20.0%
!!! AAGAGTGTATATGATTTAAA+AGG - chr1_2:58752505-58752524 Msa0080510:intron 20.0%
!!! AATGGTGTTTGATAATATTT+TGG - chr1_2:58752784-58752803 Msa0080510:CDS 20.0%
!!! ATCTTTTATTGACTTTTACT+TGG - chr1_2:58753047-58753066 Msa0080510:intron 20.0%
!! TATTGTTATGGGAAAATTAA+CGG + chr1_2:58753678-58753697 None:intergenic 20.0%
!! AAACTAAAGTAAAAAGGTAA+GGG + chr1_2:58753727-58753746 None:intergenic 20.0%
!! AAAACTAAAGTAAAAAGGTA+AGG + chr1_2:58753728-58753747 None:intergenic 20.0%
!!! TTACCTTTTTACTTTAGTTT+TGG - chr1_2:58753727-58753746 Msa0080510:CDS 20.0%
!! ATATTTAAACTGTGTAACTT+GGG + chr1_2:58753980-58753999 None:intergenic 20.0%
!! TTACACAGTTTAAATATCTT+GGG - chr1_2:58753983-58754002 Msa0080510:CDS 20.0%
!! AGGCCAAAAAAAATAAAAAA+TGG - chr1_2:58754778-58754797 Msa0080510:intron 20.0%
!! GGCCAAAAAAAATAAAAAAT+GGG - chr1_2:58754779-58754798 Msa0080510:intron 20.0%
!! ACATCAATGAATTTATTTGT+AGG - chr1_2:58755307-58755326 Msa0080510:intron 20.0%
!!! ACTTCTAAAATTCAAAAAGT+TGG - chr1_2:58756226-58756245 Msa0080510:intron 20.0%
!!! GTTTGAATTTTTTCTATATG+TGG - chr1_2:58756303-58756322 Msa0080510:intron 20.0%
!!! ATAATCTTTTTTTAAGATGG+TGG - chr1_2:58756704-58756723 Msa0080510:CDS 20.0%
!!! TTTTTATTTCAGGTAAATTC+AGG - chr1_2:58757050-58757069 Msa0080510:CDS 20.0%
!!! TTTTATTTCAGGTAAATTCA+GGG - chr1_2:58757051-58757070 Msa0080510:CDS 20.0%
!!! TGAATTTTGGACAAAATAAT+AGG + chr1_2:58758153-58758172 None:intergenic 20.0%
!!! TTATTTAAAATTCAAGCCTT+TGG - chr1_2:58758444-58758463 Msa0080510:intron 20.0%
!! TGTAGAATATTTATGAGATT+AGG + chr1_2:58758987-58759006 None:intergenic 20.0%
!! CTCATAAATATTCTACATAA+AGG - chr1_2:58758990-58759009 Msa0080510:intron 20.0%
!!! TGTTTTATTCAATTGATAGT+TGG - chr1_2:58759033-58759052 Msa0080510:intron 20.0%
!!! GTTTTATTCAATTGATAGTT+GGG - chr1_2:58759034-58759053 Msa0080510:intron 20.0%
!! TACTAATTTCAAGCATTAAT+GGG - chr1_2:58760250-58760269 Msa0080510:CDS 20.0%
!!! TCAAATTTGTTAATCATTAG+CGG + chr1_2:58760936-58760955 None:intergenic 20.0%
!!! TTTTAAAGTTATTTCTGAGT+TGG - chr1_2:58761599-58761618 Msa0080510:intron 20.0%
!!! ATTAGAAATTTTAGTCATGT+AGG - chr1_2:58761668-58761687 Msa0080510:intron 20.0%
!!! TGAATAATAATCAGTTTGTT+GGG + chr1_2:58761702-58761721 None:intergenic 20.0%
!! ATGAATAATAATCAGTTTGT+TGG + chr1_2:58761703-58761722 None:intergenic 20.0%
!! AAAAGAAATCATGACAATAT+GGG + chr1_2:58761731-58761750 None:intergenic 20.0%
!! AAAAAGAAATCATGACAATA+TGG + chr1_2:58761732-58761751 None:intergenic 20.0%
!! TAAGACTATAATATTTCCTT+CGG - chr1_2:58761837-58761856 Msa0080510:CDS 20.0%
!!! TTGATGTTATATTTTTGCTA+AGG - chr1_2:58762226-58762245 Msa0080510:five_prime_UTR 20.0%
! TGGATAAGCAACAAATTTAA+AGG + chr1_2:58751578-58751597 None:intergenic 25.0%
! ATAGAAACTACTATTCTCAT+TGG + chr1_2:58751598-58751617 None:intergenic 25.0%
! AACAAAACTAACTAACTATC+CGG + chr1_2:58751639-58751658 None:intergenic 25.0%
! TCGATAAAATTATAATCAGG+AGG + chr1_2:58751925-58751944 None:intergenic 25.0%
!!! TTATTTTTTCTCCTTTCTGT+TGG - chr1_2:58752014-58752033 Msa0080510:intron 25.0%
!! TTACATGCCAATTTTTGTTA+AGG - chr1_2:58752086-58752105 Msa0080510:intron 25.0%
!! CTAAACAAGTAATTTGTAGA+AGG + chr1_2:58752616-58752635 None:intergenic 25.0%
! AGGATTATTGACAAAAAGTT+AGG + chr1_2:58752652-58752671 None:intergenic 25.0%
! ACAAAACTCAAACACAAATA+TGG + chr1_2:58752818-58752837 None:intergenic 25.0%
!!! TGTGTTTGAGTTTTGTTTAT+AGG - chr1_2:58752822-58752841 Msa0080510:CDS 25.0%
!!! GTGTTTGAGTTTTGTTTATA+GGG - chr1_2:58752823-58752842 Msa0080510:CDS 25.0%
! TTCAATGAGAATACAAAATG+AGG + chr1_2:58752985-58753004 None:intergenic 25.0%
!! ATTTTGTATTCTCATTGAAG+TGG - chr1_2:58752986-58753005 Msa0080510:intron 25.0%
! TTCTTAAAACAAGTTCTCTT+TGG - chr1_2:58753151-58753170 Msa0080510:CDS 25.0%
! CAGAAACTAAAAATTAAAGG+TGG + chr1_2:58753340-58753359 None:intergenic 25.0%
! AAAAAAGGTTCATTATCTCA+AGG + chr1_2:58753480-58753499 None:intergenic 25.0%
! TTCTTATATTAGAGCTATCA+AGG - chr1_2:58753604-58753623 Msa0080510:intron 25.0%
!! GTTAATTTTCCCATAACAAT+AGG - chr1_2:58753677-58753696 Msa0080510:CDS 25.0%
! CATCCAAAACTAAAGTAAAA+AGG + chr1_2:58753733-58753752 None:intergenic 25.0%
! TATTTAAACTGTGTAACTTG+GGG + chr1_2:58753979-58753998 None:intergenic 25.0%
! GATATTTAAACTGTGTAACT+TGG + chr1_2:58753981-58754000 None:intergenic 25.0%
! GTTACACAGTTTAAATATCT+TGG - chr1_2:58753982-58754001 Msa0080510:CDS 25.0%
! CTTATCACATAAAACATATG+AGG + chr1_2:58754086-58754105 None:intergenic 25.0%
! TAGAAAAGATGGTAGAAAAT+AGG - chr1_2:58754317-58754336 Msa0080510:intron 25.0%
!! GTTTCTCTTATAGTTTTTCT+AGG + chr1_2:58754448-58754467 None:intergenic 25.0%
! AACTATCAAGAATGATTTAG+AGG - chr1_2:58754465-58754484 Msa0080510:intron 25.0%
!!! GGCCCATTTTTTATTTTTTT+TGG + chr1_2:58754784-58754803 None:intergenic 25.0%
!!! AGTGTTGTTTTATGAAGTAA+AGG - chr1_2:58755047-58755066 Msa0080510:CDS 25.0%
! CTTTAAATATGAAAGTCTTG+TGG + chr1_2:58755137-58755156 None:intergenic 25.0%
!! CAATTAAAGAGTACAAGAAA+AGG + chr1_2:58755519-58755538 None:intergenic 25.0%
!!! GCACTGAATTTTTTAACATT+TGG - chr1_2:58755861-58755880 Msa0080510:intron 25.0%
!!! CTGAATTTTTTAACATTTGG+AGG - chr1_2:58755864-58755883 Msa0080510:intron 25.0%
! AAGGATATTTACCTTCTTTA+TGG + chr1_2:58756140-58756159 None:intergenic 25.0%
! TTTATCAAACCAAATCATGA+AGG + chr1_2:58756159-58756178 None:intergenic 25.0%
! TAACATAAAGGATTCTACAA+TGG + chr1_2:58756273-58756292 None:intergenic 25.0%
! GCTATACTTACTATATAAGT+TGG - chr1_2:58756589-58756608 Msa0080510:intron 25.0%
!! TTGAATTTTGTTCTATTTGC+AGG - chr1_2:58756635-58756654 Msa0080510:intron 25.0%
! GGTGAACATATTTAGTAATT+TGG + chr1_2:58756836-58756855 None:intergenic 25.0%
! TATCTTTCAAAACTGTTGTA+TGG - chr1_2:58756921-58756940 Msa0080510:intron 25.0%
!!! ATTTTAGTTGTCAACTTCTA+AGG + chr1_2:58757339-58757358 None:intergenic 25.0%
!! TGCATAAGCATAATTTTCAT+AGG - chr1_2:58757358-58757377 Msa0080510:intron 25.0%
!!! ATTTTAGTTGTCAACTTCTA+AGG + chr1_2:58757339-58757358 None:intergenic 25.0%
!! TGCATAAGCATAATTTTCAT+AGG - chr1_2:58757358-58757377 Msa0080510:intron 25.0%
!!! TAATGACTGAATTTTAAAGG+CGG + chr1_2:58758345-58758364 None:intergenic 25.0%
!! AATAAATGAATTGGCTTATG+AGG + chr1_2:58758429-58758448 None:intergenic 25.0%
! ATTTCATCAATCAATACAAG+AGG + chr1_2:58758824-58758843 None:intergenic 25.0%
! TAGACAGTTCAATTTATTTG+TGG - chr1_2:58758863-58758882 Msa0080510:intron 25.0%
!!! TTTGTTTTCTAATTTCCCTT+TGG - chr1_2:58758895-58758914 Msa0080510:intron 25.0%
! TGCACTGTTTATTTATTACA+TGG - chr1_2:58759211-58759230 Msa0080510:intron 25.0%
! GAAAAGAAAAATACTTGTTC+CGG + chr1_2:58759480-58759499 None:intergenic 25.0%
!!! ATTGCCTTATTGGTTTTAAT+TGG - chr1_2:58759559-58759578 Msa0080510:intron 25.0%
! TCAACCAATTAAAACCAATA+AGG + chr1_2:58759566-58759585 None:intergenic 25.0%
!!! TTGGTTTTAATTGGTTGAAA+AGG - chr1_2:58759568-58759587 Msa0080510:intron 25.0%
!!! TTTTTTCTATGTGCTTTTGA+AGG + chr1_2:58759692-58759711 None:intergenic 25.0%
! AGCACATAGAAAAAATTTAC+CGG - chr1_2:58759697-58759716 Msa0080510:CDS 25.0%
!!! TGAAGAAGATTTTGATGAAA+CGG - chr1_2:58759987-58760006 Msa0080510:intron 25.0%
!!! ATCAAGTTTAGAGTTTTCAT+CGG + chr1_2:58760073-58760092 None:intergenic 25.0%
! CATTAATGCTTGAAATTAGT+AGG + chr1_2:58760251-58760270 None:intergenic 25.0%
! CTACTAATTTCAAGCATTAA+TGG - chr1_2:58760249-58760268 Msa0080510:CDS 25.0%
! CACAAAAAAATGCAACTATA+TGG + chr1_2:58760331-58760350 None:intergenic 25.0%
!!! TTTTTCGGCGAAAAATATTA+TGG - chr1_2:58760396-58760415 Msa0080510:CDS 25.0%
!! TTCCATTTCTATTTTGTACA+TGG - chr1_2:58760611-58760630 Msa0080510:intron 25.0%
! AACCATGTACAAAATAGAAA+TGG + chr1_2:58760616-58760635 None:intergenic 25.0%
! TATCTTTAAATCATCACACA+TGG + chr1_2:58760641-58760660 None:intergenic 25.0%
! TTATGTATGTTAATGTTGGT+AGG - chr1_2:58760959-58760978 Msa0080510:intron 25.0%
!! TCGAATTTAGATGATTTTGT+TGG - chr1_2:58761050-58761069 Msa0080510:intron 25.0%
! TAAAAAGAAATTCCAGAACT+TGG + chr1_2:58761584-58761603 None:intergenic 25.0%
! ATATAATACAAAACTCAGAC+CGG + chr1_2:58762050-58762069 None:intergenic 25.0%
!!! GATGATACTCGTTTTTTTTT+TGG - chr1_2:58762256-58762275 Msa0080510:five_prime_UTR 25.0%
!!! GTTTTTTTGACAAGCAAGAA+AGG - chr1_2:58750493-58750512 Msa0080510:three_prime_UTR 30.0%
! GAATTCAAAACTCTAAGAAG+CGG + chr1_2:58750816-58750835 None:intergenic 30.0%
!! TGATCCTTTTTCGTTTATGA+AGG - chr1_2:58751083-58751102 Msa0080510:intron 30.0%
CATTCCTTCATAAACGAAAA+AGG + chr1_2:58751090-58751109 None:intergenic 30.0%
! TCAATTTCTTCTAGCAGTTT+TGG + chr1_2:58751260-58751279 None:intergenic 30.0%
TGTAGGATAAAAACTCTATC+TGG + chr1_2:58751455-58751474 None:intergenic 30.0%
AGTATGTCGACATAATAGTT+CGG + chr1_2:58751736-58751755 None:intergenic 30.0%
CATAGACATATTGTTGAACT+TGG - chr1_2:58751782-58751801 Msa0080510:CDS 30.0%
! CAGTTTGCTTGATTACTTAA+TGG - chr1_2:58751991-58752010 Msa0080510:intron 30.0%
AAATTGGCATGTAAAATCCT+GGG + chr1_2:58752080-58752099 None:intergenic 30.0%
AAAATTGGCATGTAAAATCC+TGG + chr1_2:58752081-58752100 None:intergenic 30.0%
! TGCCAATTTTTGTTAAGGTA+TGG - chr1_2:58752091-58752110 Msa0080510:intron 30.0%
CACCATACCTTAACAAAAAT+TGG + chr1_2:58752096-58752115 None:intergenic 30.0%
TGGCTTAATCATATGTGATT+TGG - chr1_2:58752224-58752243 Msa0080510:intron 30.0%
TTTCCATATGTATGTGTTCA+TGG - chr1_2:58752284-58752303 Msa0080510:intron 30.0%
AATCCATGAACACATACATA+TGG + chr1_2:58752290-58752309 None:intergenic 30.0%
ATATGTATGTGTTCATGGAT+TGG - chr1_2:58752289-58752308 Msa0080510:intron 30.0%
! ATTGGCTTAATCATGTGATT+TGG - chr1_2:58752307-58752326 Msa0080510:intron 30.0%
GCATACAAAATCACATACTT+GGG + chr1_2:58752572-58752591 None:intergenic 30.0%
! CAAGTATGTGATTTTGTATG+CGG - chr1_2:58752571-58752590 Msa0080510:intron 30.0%
! TGAAATCTGGTATTGAAAAC+AGG + chr1_2:58752672-58752691 None:intergenic 30.0%
! TTAACACTTTCCTTATTTGC+AGG - chr1_2:58752897-58752916 Msa0080510:intron 30.0%
! TGATCAACTTTTACAGTAAG+CGG + chr1_2:58752934-58752953 None:intergenic 30.0%
! TGTAAAAGTTGATCACCTTA+AGG - chr1_2:58752939-58752958 Msa0080510:intron 30.0%
ATCAATAAAGACATGCCTTA+AGG + chr1_2:58752957-58752976 None:intergenic 30.0%
CAAAGATGATGACATCATAA+AGG - chr1_2:58753092-58753111 Msa0080510:CDS 30.0%
CAATAAATGCAAGCACAAAA+GGG + chr1_2:58753218-58753237 None:intergenic 30.0%
ATTTATTGGAACATGGGAAT+GGG - chr1_2:58753230-58753249 Msa0080510:intron 30.0%
CACAGCACATAAATAAACAA+AGG + chr1_2:58753274-58753293 None:intergenic 30.0%
!! TTTGTTTTCATTGCTTTGCT+AGG - chr1_2:58753294-58753313 Msa0080510:intron 30.0%
ATTGCTTTGCTAGGATTTAT+TGG - chr1_2:58753303-58753322 Msa0080510:intron 30.0%
!!! TTCTCTGTCATTTTGTACTA+TGG + chr1_2:58754010-58754029 None:intergenic 30.0%
TGTATATCATTGTTCAAGCT+AGG - chr1_2:58754041-58754060 Msa0080510:intron 30.0%
! TCTACCATCTTTTCTACTAT+AGG + chr1_2:58754313-58754332 None:intergenic 30.0%
!!! CTACTTTTTCTTTGCAGAAA+AGG - chr1_2:58754589-58754608 Msa0080510:intron 30.0%
ATAACACACTATAAATCCTG+CGG - chr1_2:58754937-58754956 Msa0080510:intron 30.0%
ATAAAACAACACTTCCTTGA+AGG + chr1_2:58755040-58755059 None:intergenic 30.0%
! TAACTGAAGTACTTAGTATG+TGG - chr1_2:58755554-58755573 Msa0080510:intron 30.0%
!! TATGTGGTTGGTATATGTTT+TGG - chr1_2:58755570-58755589 Msa0080510:CDS 30.0%
! TAGGTGATTTTACATATCCA+AGG - chr1_2:58755659-58755678 Msa0080510:CDS 30.0%
AAGTTTGTGTGAATTATTGC+AGG - chr1_2:58756039-58756058 Msa0080510:intron 30.0%
GCAATTGAAGAAAAGATAAG+TGG - chr1_2:58756076-58756095 Msa0080510:intron 30.0%
GCTGCTCATTTAACAAATAA+CGG + chr1_2:58756111-58756130 None:intergenic 30.0%
TTTGTTAAATGAGCAGCTTA+AGG - chr1_2:58756114-58756133 Msa0080510:CDS 30.0%
GGTAAATATCCTTCATGATT+TGG - chr1_2:58756147-58756166 Msa0080510:intron 30.0%
AGGTTCAACACATAGAATTA+GGG + chr1_2:58756424-58756443 None:intergenic 30.0%
ATTATAACTGCACTTGTGTT+AGG + chr1_2:58756537-58756556 None:intergenic 30.0%
TTTGTTCTATTTGCAGGAAT+TGG - chr1_2:58756641-58756660 Msa0080510:intron 30.0%
TTGTTCTATTTGCAGGAATT+GGG - chr1_2:58756642-58756661 Msa0080510:intron 30.0%
ACTAAATATGTTCACCTAAC+TGG - chr1_2:58756840-58756859 Msa0080510:CDS 30.0%
TTGTTTGTGCTTTAGTCTAT+AGG - chr1_2:58756971-58756990 Msa0080510:intron 30.0%
! CTTTAGTCTATAGGTTTTTC+TGG - chr1_2:58756980-58756999 Msa0080510:intron 30.0%
! TCTATAACTTGTAACACATG+AGG + chr1_2:58757109-58757128 None:intergenic 30.0%
ATTCTTGATGAAGACCATTA+TGG - chr1_2:58757482-58757501 Msa0080510:intron 30.0%
CTTCATCAGTTAATCCATAA+TGG + chr1_2:58757499-58757518 None:intergenic 30.0%
AATTAACAGATTCAGACTCA+TGG + chr1_2:58757615-58757634 None:intergenic 30.0%
ATTCTTGATGAAGACCATTA+CGG - chr1_2:58757482-58757501 Msa0080510:intron 30.0%
TGATGTGAAGGAAAGAATAT+TGG - chr1_2:58757708-58757727 Msa0080510:intron 30.0%
ATATTGGAATTCATAGCTGT+TGG - chr1_2:58757724-58757743 Msa0080510:intron 30.0%
TATTGGAATTCATAGCTGTT+GGG - chr1_2:58757725-58757744 Msa0080510:intron 30.0%
TGTGATTAATGTCTACCAAA+TGG - chr1_2:58757890-58757909 Msa0080510:intron 30.0%
ATCGAGATATATGGTGATTT+AGG + chr1_2:58757958-58757977 None:intergenic 30.0%
!!! GTGCTATTGGTTATTTTAAC+TGG - chr1_2:58758047-58758066 Msa0080510:intron 30.0%
!! AATGACTGAATTTTAAAGGC+GGG + chr1_2:58758344-58758363 None:intergenic 30.0%
TCCTGATCTTTCTTATATAC+AGG - chr1_2:58758504-58758523 Msa0080510:intron 30.0%
TCCTGTATATAAGAAAGATC+AGG + chr1_2:58758508-58758527 None:intergenic 30.0%
GGAAAAATTATCTGTCTTTC+TGG - chr1_2:58758525-58758544 Msa0080510:intron 30.0%
ATAAATCTGTTTCCTTCACT+AGG - chr1_2:58758661-58758680 Msa0080510:intron 30.0%
TTGATACCAGTTATATAGTG+TGG - chr1_2:58758689-58758708 Msa0080510:intron 30.0%
ATCAATCAATACAAGAGGAT+TGG + chr1_2:58758819-58758838 None:intergenic 30.0%
GCATTATATTTATTAGGACC+AGG + chr1_2:58758931-58758950 None:intergenic 30.0%
!!! AAGGTTGGTTTTTGATAATC+TGG - chr1_2:58759163-58759182 Msa0080510:intron 30.0%
!!! AGGTTGGTTTTTGATAATCT+GGG - chr1_2:58759164-58759183 Msa0080510:intron 30.0%
!!! ATGTGCCAATTTTGATTTCA+GGG + chr1_2:58759250-58759269 None:intergenic 30.0%
!!! AATGTGCCAATTTTGATTTC+AGG + chr1_2:58759251-58759270 None:intergenic 30.0%
ACCAATAAGGCAATAAAAGA+TGG + chr1_2:58759553-58759572 None:intergenic 30.0%
!! TACACAAATTAACTTGCTAC+AGG - chr1_2:58759599-58759618 Msa0080510:CDS 30.0%
CATAGAAAAAATTTACCGGA+AGG - chr1_2:58759701-58759720 Msa0080510:CDS 30.0%
AAAAAATACTACAGACCTTC+CGG + chr1_2:58759719-58759738 None:intergenic 30.0%
! GAGATATGCTATGATTTGTA+TGG - chr1_2:58759774-58759793 Msa0080510:intron 30.0%
GTCCTGAAATATTCTGTTTA+TGG - chr1_2:58759894-58759913 Msa0080510:intron 30.0%
TGCCATAAACAGAATATTTC+AGG + chr1_2:58759899-58759918 None:intergenic 30.0%
AAATCTTCTTCAGCTTTCTT+TGG + chr1_2:58759979-58759998 None:intergenic 30.0%
!! GAAGAAGATTTTGATGAAAC+GGG - chr1_2:58759988-58760007 Msa0080510:intron 30.0%
GTACTACTACCATTCAAAAA+GGG - chr1_2:58760010-58760029 Msa0080510:intron 30.0%
CGATAAATCTACAGATATTG+AGG - chr1_2:58760137-58760156 Msa0080510:intron 30.0%
ACATATGATATGCTCTTGAA+TGG + chr1_2:58760480-58760499 None:intergenic 30.0%
TACATTGCAAAATAGTGTCA+AGG + chr1_2:58760774-58760793 None:intergenic 30.0%
! CACTATTTTGCAATGTACAA+TGG - chr1_2:58760777-58760796 Msa0080510:intron 30.0%
!! AATGGTACAACGTTTTTAAG+CGG - chr1_2:58760795-58760814 Msa0080510:intron 30.0%
TTAAGCGGCAAAATATTATG+AGG - chr1_2:58760810-58760829 Msa0080510:intron 30.0%
GTTATTGAAACACAAGATCT+TGG + chr1_2:58760861-58760880 None:intergenic 30.0%
! GGAAAAAATAGTTTGTGTAG+TGG + chr1_2:58760883-58760902 None:intergenic 30.0%
!! AATTTGTTAATCATTAGCGG+TGG + chr1_2:58760933-58760952 None:intergenic 30.0%
AAAAGAAAGAGAGGAAGATA+AGG - chr1_2:58760986-58761005 Msa0080510:intron 30.0%
ATCTTTGATCAAACACCTAT+TGG - chr1_2:58761098-58761117 Msa0080510:intron 30.0%
TTTAGTCTCTATATACAGTG+TGG + chr1_2:58761162-58761181 None:intergenic 30.0%
AGACTAAATCTGTTGAACAA+GGG - chr1_2:58761174-58761193 Msa0080510:intron 30.0%
! TTTTAGTCATGTAGGAACTT+TGG - chr1_2:58761676-58761695 Msa0080510:intron 30.0%
! ATTTCTTTTTGCATTGTGTC+TGG - chr1_2:58761742-58761761 Msa0080510:intron 30.0%
CTATATGCAGATCTTTGATT+TGG - chr1_2:58761930-58761949 Msa0080510:CDS 30.0%
! ATGTTTTTCTCTTTTAAGCC+TGG - chr1_2:58762133-58762152 Msa0080510:five_prime_UTR 30.0%
! CAAATTTTCCTTTCTTGTCG+CGG + chr1_2:58750473-58750492 None:intergenic 35.0%
! ACAAGCAAGAAAGGACATTT+TGG - chr1_2:58750502-58750521 Msa0080510:three_prime_UTR 35.0%
!! GAAAGGACATTTTGGTCATT+TGG - chr1_2:58750510-58750529 Msa0080510:three_prime_UTR 35.0%
!! GAGAATTGAATGGGTTTTGA+CGG + chr1_2:58750644-58750663 None:intergenic 35.0%
GTGAACGTGTGAATTGAATT+GGG + chr1_2:58750690-58750709 None:intergenic 35.0%
TGAGCTTCAACATTGGATTA+GGG + chr1_2:58750719-58750738 None:intergenic 35.0%
ATGAGCTTCAACATTGGATT+AGG + chr1_2:58750720-58750739 None:intergenic 35.0%
GATGAAATGAGCTTCAACAT+TGG + chr1_2:58750726-58750745 None:intergenic 35.0%
!!! AGAGTTTTGAATTCTCTCAG+CGG - chr1_2:58750822-58750841 Msa0080510:CDS 35.0%
!!! AGGGAGAGTATTTTTCTGTT+CGG - chr1_2:58750872-58750891 Msa0080510:CDS 35.0%
! AGTATTTTTCTGTTCGGAGT+CGG - chr1_2:58750878-58750897 Msa0080510:CDS 35.0%
! ATAGGTGTTGTACTGTTGTT+TGG - chr1_2:58751212-58751231 Msa0080510:intron 35.0%
! TAGGTGTTGTACTGTTGTTT+GGG - chr1_2:58751213-58751232 Msa0080510:intron 35.0%
TTATAGTGGCACTATAGCAT+TGG - chr1_2:58751335-58751354 Msa0080510:CDS 35.0%
! GCAATTGACAACACTAGTTT+CGG - chr1_2:58751399-58751418 Msa0080510:CDS 35.0%
! CAATTGACAACACTAGTTTC+GGG - chr1_2:58751400-58751419 Msa0080510:CDS 35.0%
! TGTTATCGTAGTTTTCTGTC+CGG - chr1_2:58751617-58751636 Msa0080510:CDS 35.0%
ACATACTCACCATCTAAATG+AGG - chr1_2:58751749-58751768 Msa0080510:CDS 35.0%
TTGACTCAACCTCATTTAGA+TGG + chr1_2:58751761-58751780 None:intergenic 35.0%
!! ATGACACTTTTAAGTCATGC+TGG - chr1_2:58751806-58751825 Msa0080510:intron 35.0%
ATAGGACACGACAAAGTTTA+GGG + chr1_2:58751884-58751903 None:intergenic 35.0%
TATAGGACACGACAAAGTTT+AGG + chr1_2:58751885-58751904 None:intergenic 35.0%
TTGATGAAAGAGGGTAGTAT+AGG + chr1_2:58751902-58751921 None:intergenic 35.0%
AAAAGAGGTCTATGTTGCAA+CGG + chr1_2:58752057-58752076 None:intergenic 35.0%
ATGTAAAATCCTGGGAAAAG+AGG + chr1_2:58752072-58752091 None:intergenic 35.0%
!! GATTATTTTTCCATGCATCC+AGG - chr1_2:58752360-58752379 Msa0080510:intron 35.0%
TGTAAAGCTGCCAATAGTTT+GGG + chr1_2:58752388-58752407 None:intergenic 35.0%
TCAGAGCTAGATACTACATT+GGG + chr1_2:58752478-58752497 None:intergenic 35.0%
TTTAACCGTCTTCATGAAGT+TGG - chr1_2:58752538-58752557 Msa0080510:intron 35.0%
TTAACCGTCTTCATGAAGTT+GGG - chr1_2:58752539-58752558 Msa0080510:intron 35.0%
CGCATACAAAATCACATACT+TGG + chr1_2:58752573-58752592 None:intergenic 35.0%
! TACCAGATTTCAAGTATCCA+TGG - chr1_2:58752680-58752699 Msa0080510:CDS 35.0%
! ACCAGATTTCAAGTATCCAT+GGG - chr1_2:58752681-58752700 Msa0080510:CDS 35.0%
! GATCAACTTTTACAGTAAGC+GGG + chr1_2:58752933-58752952 None:intergenic 35.0%
CCAATAAATGCAAGCACAAA+AGG + chr1_2:58753219-58753238 None:intergenic 35.0%
! CCTTTTGTGCTTGCATTTAT+TGG - chr1_2:58753216-58753235 Msa0080510:intron 35.0%
TGCTTGCATTTATTGGAACA+TGG - chr1_2:58753223-58753242 Msa0080510:intron 35.0%
GCTTGCATTTATTGGAACAT+GGG - chr1_2:58753224-58753243 Msa0080510:intron 35.0%
CATTTATTGGAACATGGGAA+TGG - chr1_2:58753229-58753248 Msa0080510:intron 35.0%
TTTATTGGAACATGGGAATG+GGG - chr1_2:58753231-58753250 Msa0080510:intron 35.0%
ATATGAAGTCAACTCATTCG+GGG + chr1_2:58753421-58753440 None:intergenic 35.0%
CATATGAAGTCAACTCATTC+GGG + chr1_2:58753422-58753441 None:intergenic 35.0%
CCATATGAAGTCAACTCATT+CGG + chr1_2:58753423-58753442 None:intergenic 35.0%
TAACATTAGGGTTGTTTGCA+TGG + chr1_2:58753452-58753471 None:intergenic 35.0%
! TGATGCCTAGAGAGATTTTA+TGG - chr1_2:58753552-58753571 Msa0080510:intron 35.0%
CATCTCCATAAAATCTCTCT+AGG + chr1_2:58753560-58753579 None:intergenic 35.0%
TGGTGCAATCCTATTGTTAT+GGG + chr1_2:58753689-58753708 None:intergenic 35.0%
TTGGTGCAATCCTATTGTTA+TGG + chr1_2:58753690-58753709 None:intergenic 35.0%
ATAACAATAGGATTGCACCA+AGG - chr1_2:58753689-58753708 Msa0080510:CDS 35.0%
TAACAATAGGATTGCACCAA+GGG - chr1_2:58753690-58753709 Msa0080510:CDS 35.0%
AGTAAAAAGGTAAGGGCTTA+GGG + chr1_2:58753720-58753739 None:intergenic 35.0%
AAGTAAAAAGGTAAGGGCTT+AGG + chr1_2:58753721-58753740 None:intergenic 35.0%
! TCTGCAAAAAGCATACATCT+CGG + chr1_2:58753792-58753811 None:intergenic 35.0%
TAGAAGCAAGACATAGTACA+TGG - chr1_2:58753891-58753910 Msa0080510:intron 35.0%
TGGAATGTAACTTCAGCAAA+AGG - chr1_2:58753911-58753930 Msa0080510:intron 35.0%
TTCAAGCTAGGTAGTTGAAA+TGG - chr1_2:58754053-58754072 Msa0080510:intron 35.0%
!! AGTACTCTGCTTAAGTTGAA+AGG - chr1_2:58754108-58754127 Msa0080510:intron 35.0%
!! AGATTAGACGGATTAGGATT+AGG - chr1_2:58754256-58754275 Msa0080510:intron 35.0%
AGCACCTATAGTAGAAAAGA+TGG - chr1_2:58754306-58754325 Msa0080510:intron 35.0%
AGATGGTAGAAAATAGGCTT+AGG - chr1_2:58754323-58754342 Msa0080510:intron 35.0%
AGTCAGATCAAAAGATGTAG+AGG - chr1_2:58754412-58754431 Msa0080510:intron 35.0%
!!! AGCAATGTCGGCATTTTTTA+GGG + chr1_2:58754673-58754692 None:intergenic 35.0%
!!! TAGCAATGTCGGCATTTTTT+AGG + chr1_2:58754674-58754693 None:intergenic 35.0%
TAAAAAATGCCGACATTGCT+AGG - chr1_2:58754673-58754692 Msa0080510:intron 35.0%
!! TTTTTGGCCTGTAGACAAAA+TGG + chr1_2:58754768-58754787 None:intergenic 35.0%
TTGCATCCTGAATCTAAGTT+TGG - chr1_2:58754821-58754840 Msa0080510:intron 35.0%
ACTTCACCAAACTTAGATTC+AGG + chr1_2:58754830-58754849 None:intergenic 35.0%
! TCTAAGTTTGGTGAAGTCTT+TGG - chr1_2:58754833-58754852 Msa0080510:intron 35.0%
!! GAAATTTACTCTGAAGTGCA+CGG - chr1_2:58754999-58755018 Msa0080510:intron 35.0%
CAAACTGTATGAGAAACAAG+AGG + chr1_2:58755091-58755110 None:intergenic 35.0%
GGACTCATTAATGCTTATGT+AGG + chr1_2:58755486-58755505 None:intergenic 35.0%
!! ACAAGAAAAGGCACTTAGTA+CGG + chr1_2:58755507-58755526 None:intergenic 35.0%
! TGAAGTACTTAGTATGTGGT+TGG - chr1_2:58755558-58755577 Msa0080510:intron 35.0%
TCGTTAATTGTGCAGCATAT+AGG - chr1_2:58755640-58755659 Msa0080510:CDS 35.0%
!!! ATTTTGGAGCTGCAATATCT+GGG - chr1_2:58755689-58755708 Msa0080510:CDS 35.0%
!! CATTTGTTGTGTTGTTGAAC+AGG - chr1_2:58755889-58755908 Msa0080510:intron 35.0%
ATTGAAACTTACACTCGAGT+TGG - chr1_2:58755922-58755941 Msa0080510:intron 35.0%
GATGGAAATCAGTAAGATTC+AGG - chr1_2:58755955-58755974 Msa0080510:intron 35.0%
AGAGAAAAACAAGCTTGTCT+AGG + chr1_2:58756195-58756214 None:intergenic 35.0%
CATAAAGGATTCTACAATGG+AGG + chr1_2:58756270-58756289 None:intergenic 35.0%
GTAGAATCCTTTATGTTAGC+AGG - chr1_2:58756275-58756294 Msa0080510:intron 35.0%
ACAGTATCCTGCTAACATAA+AGG + chr1_2:58756285-58756304 None:intergenic 35.0%
GGTTCAACACATAGAATTAG+GGG + chr1_2:58756423-58756442 None:intergenic 35.0%
CAGGTTCAACACATAGAATT+AGG + chr1_2:58756425-58756444 None:intergenic 35.0%
AACTCATGATTGACAGTTCA+CGG - chr1_2:58756445-58756464 Msa0080510:intron 35.0%
AGACGTTATAGTTTATCCTG+TGG - chr1_2:58756475-58756494 Msa0080510:intron 35.0%
!! AGGAAGTTTTGGTGTGATTT+AGG - chr1_2:58756501-58756520 Msa0080510:intron 35.0%
CACTTGTGTTAGGATATCAA+AGG + chr1_2:58756527-58756546 None:intergenic 35.0%
!!! TTCGGGGTTGAAATCTTTTT+TGG - chr1_2:58756807-58756826 Msa0080510:intron 35.0%
! TTTCAGGTAAATTCAGGGAA+AGG - chr1_2:58757056-58757075 Msa0080510:CDS 35.0%
! TAACTTGTAACACATGAGGT+GGG + chr1_2:58757105-58757124 None:intergenic 35.0%
! ATAACTTGTAACACATGAGG+TGG + chr1_2:58757106-58757125 None:intergenic 35.0%
TGTGTTACAAGTTATAGACG+AGG - chr1_2:58757111-58757130 Msa0080510:CDS 35.0%
! GCATAATTTTCATAGGCTCT+TGG - chr1_2:58757365-58757384 Msa0080510:intron 35.0%
ATGAGAACTTTCATGTCACT+CGG - chr1_2:58757450-58757469 Msa0080510:intron 35.0%
! GCATAATTTTCATAGGCTCT+TGG - chr1_2:58757365-58757384 Msa0080510:intron 35.0%
ATGAGAACTTTCATGTCACT+CGG - chr1_2:58757450-58757469 Msa0080510:intron 35.0%
TCACATCAGTTAATCCGTAA+TGG + chr1_2:58757696-58757715 None:intergenic 35.0%
! TTACGGATTAACTGATGTGA+AGG - chr1_2:58757696-58757715 Msa0080510:intron 35.0%
TCACTTATGTATTGTACCTC+AGG - chr1_2:58757780-58757799 Msa0080510:intron 35.0%
! TATTGTACCTCAGGTTTTTC+TGG - chr1_2:58757789-58757808 Msa0080510:intron 35.0%
! ATTGTACCTCAGGTTTTTCT+GGG - chr1_2:58757790-58757809 Msa0080510:intron 35.0%
TCACAGATCAACATTTAGCA+GGG + chr1_2:58757875-58757894 None:intergenic 35.0%
ATCACAGATCAACATTTAGC+AGG + chr1_2:58757876-58757895 None:intergenic 35.0%
!! AAATTGGGCATCGAGATATA+TGG + chr1_2:58757967-58757986 None:intergenic 35.0%
GTCCAAAATTCAGTCATGAT+AGG - chr1_2:58758161-58758180 Msa0080510:intron 35.0%
! TGCCTATCATGACTGAATTT+TGG + chr1_2:58758166-58758185 None:intergenic 35.0%
CGTACAATACATCAATTGGT+GGG + chr1_2:58758225-58758244 None:intergenic 35.0%
AGCTTCTTGTGTCAAAAACA+GGG + chr1_2:58758256-58758275 None:intergenic 35.0%
!! ATGACTGAATTTTAAAGGCG+GGG + chr1_2:58758343-58758362 None:intergenic 35.0%
ATACCAGTTATATAGTGTGG+TGG - chr1_2:58758692-58758711 Msa0080510:intron 35.0%
GTACAATGCCTTAAGAATGT+GGG - chr1_2:58758788-58758807 Msa0080510:intron 35.0%
! TTCAATTGATAGTTGGGCAA+AGG - chr1_2:58759040-58759059 Msa0080510:intron 35.0%
AGAAAATTAGCATTCTGCTC+GGG + chr1_2:58759109-58759128 None:intergenic 35.0%
CAGAAAATTAGCATTCTGCT+CGG + chr1_2:58759110-58759129 None:intergenic 35.0%
!! TTGGTTTTTGATAATCTGGG+TGG - chr1_2:58759167-58759186 Msa0080510:intron 35.0%
GAGTACCCTGAAATCAAAAT+TGG - chr1_2:58759242-58759261 Msa0080510:intron 35.0%
TAGCAATTCATTGCAGGAAA+AGG + chr1_2:58759520-58759539 None:intergenic 35.0%
TTATGCTAGCAATTCATTGC+AGG + chr1_2:58759526-58759545 None:intergenic 35.0%
! GCCATCTTTTATTGCCTTAT+TGG - chr1_2:58759549-58759568 Msa0080510:intron 35.0%
!! ACAAATTAACTTGCTACAGG+TGG - chr1_2:58759602-58759621 Msa0080510:CDS 35.0%
GGTACTACTACCATTCAAAA+AGG - chr1_2:58760009-58760028 Msa0080510:intron 35.0%
ATTGCTACTCTCTATCAACA+CGG + chr1_2:58760040-58760059 None:intergenic 35.0%
TAAAAGTAAGGTTGCACAGA+AGG + chr1_2:58760904-58760923 None:intergenic 35.0%
!! TGTGCAACCTTACTTTTATG+TGG - chr1_2:58760906-58760925 Msa0080510:intron 35.0%
GTAGGTTACAAAAGAAAGAG+AGG - chr1_2:58760977-58760996 Msa0080510:intron 35.0%
GAGACTAAATCTGTTGAACA+AGG - chr1_2:58761173-58761192 Msa0080510:intron 35.0%
GACTAAATCTGTTGAACAAG+GGG - chr1_2:58761175-58761194 Msa0080510:intron 35.0%
CATTACATCTCCTAATTGAC+CGG + chr1_2:58761225-58761244 None:intergenic 35.0%
CAATTGCCAGAGATATACTA+CGG - chr1_2:58761270-58761289 Msa0080510:intron 35.0%
AATTGCCAGAGATATACTAC+GGG - chr1_2:58761271-58761290 Msa0080510:intron 35.0%
ATGGAGGTGAAACTTTGTAT+TGG + chr1_2:58761324-58761343 None:intergenic 35.0%
TTTGTGCTCGTCATCTTTAA+TGG - chr1_2:58761548-58761567 Msa0080510:intron 35.0%
AGAAAACTATTGCTGCAAGA+AGG - chr1_2:58761806-58761825 Msa0080510:CDS 35.0%
! AAATCTCTCTTATTTGCCGA+AGG + chr1_2:58761856-58761875 None:intergenic 35.0%
CTAGCACCTAATGTAAAAGA+AGG - chr1_2:58761883-58761902 Msa0080510:CDS 35.0%
! TCGAGACCTTCTTTTACATT+AGG + chr1_2:58761892-58761911 None:intergenic 35.0%
!!! CAGATCTTTGATTTGGCTTT+TGG - chr1_2:58761937-58761956 Msa0080510:CDS 35.0%
GAGAAGTAAATCACTAATGC+CGG - chr1_2:58761982-58762001 Msa0080510:CDS 35.0%
! AACGAGATTTTCTATTGAGC+TGG - chr1_2:58762021-58762040 Msa0080510:CDS 35.0%
! ACGAGATTTTCTATTGAGCT+GGG - chr1_2:58762022-58762041 Msa0080510:CDS 35.0%
! AACATATTTTGCCCTGAACA+CGG + chr1_2:58762118-58762137 None:intergenic 35.0%
CGCGACAAGAAAGGAAAATT+TGG - chr1_2:58750471-58750490 Msa0080510:three_prime_UTR 40.0%
TTTGGTCATTTGGATAGACG+AGG - chr1_2:58750520-58750539 Msa0080510:three_prime_UTR 40.0%
TTGGTCATTTGGATAGACGA+GGG - chr1_2:58750521-58750540 Msa0080510:three_prime_UTR 40.0%
GATAGACGAGGGTTTATGAA+GGG - chr1_2:58750532-58750551 Msa0080510:three_prime_UTR 40.0%
!! AATTGAATGGGTTTTGACGG+TGG + chr1_2:58750641-58750660 None:intergenic 40.0%
GGTGAACGTGTGAATTGAAT+TGG + chr1_2:58750691-58750710 None:intergenic 40.0%
! CAACATTGGATTAGGGGATT+AGG + chr1_2:58750712-58750731 None:intergenic 40.0%
! GAGCTTCAACATTGGATTAG+GGG + chr1_2:58750718-58750737 None:intergenic 40.0%
AGTCGGAGTCATCGTTATTT+GGG - chr1_2:58750849-58750868 Msa0080510:CDS 40.0%
TTCAGCATCAACCACATGAT+CGG + chr1_2:58750919-58750938 None:intergenic 40.0%
!! GATTACCTCACTGTTGGTTT+CGG - chr1_2:58751011-58751030 Msa0080510:intron 40.0%
AAATTCCGAAACCAACAGTG+AGG + chr1_2:58751019-58751038 None:intergenic 40.0%
! TCTGTTTGATGTTGCTTCGA+TGG - chr1_2:58751530-58751549 Msa0080510:CDS 40.0%
! CTGTTTGATGTTGCTTCGAT+GGG - chr1_2:58751531-58751550 Msa0080510:CDS 40.0%
! CAAAGTTTAGGGCAGCAATA+GGG + chr1_2:58751873-58751892 None:intergenic 40.0%
! ACAAAGTTTAGGGCAGCAAT+AGG + chr1_2:58751874-58751893 None:intergenic 40.0%
!! ATCAGGAGGTTGATGAAAGA+GGG + chr1_2:58751911-58751930 None:intergenic 40.0%
!! AATCAGGAGGTTGATGAAAG+AGG + chr1_2:58751912-58751931 None:intergenic 40.0%
TTTCTCCTTTCTGTTGGATC+AGG - chr1_2:58752020-58752039 Msa0080510:intron 40.0%
CAAAACCTGATCCAACAGAA+AGG + chr1_2:58752028-58752047 None:intergenic 40.0%
! CTTTCTGTTGGATCAGGTTT+TGG - chr1_2:58752026-58752045 Msa0080510:intron 40.0%
TATCCGTCTTTGCTCATTAC+AGG - chr1_2:58752140-58752159 Msa0080510:intron 40.0%
AAGCCTGTAATGAGCAAAGA+CGG + chr1_2:58752146-58752165 None:intergenic 40.0%
TCAGTGCATGTATGTGTTCA+TGG - chr1_2:58752199-58752218 Msa0080510:intron 40.0%
GCATGTATGTGTTCATGGAT+TGG - chr1_2:58752204-58752223 Msa0080510:intron 40.0%
GTAAAGCTGCCAATAGTTTG+GGG + chr1_2:58752387-58752406 None:intergenic 40.0%
CTGTAAAGCTGCCAATAGTT+TGG + chr1_2:58752389-58752408 None:intergenic 40.0%
CAAACTATTGGCAGCTTTAC+AGG - chr1_2:58752387-58752406 Msa0080510:intron 40.0%
GTCAGAGCTAGATACTACAT+TGG + chr1_2:58752479-58752498 None:intergenic 40.0%
! CCAGATTTCAAGTATCCATG+GGG - chr1_2:58752682-58752701 Msa0080510:CDS 40.0%
!!! TGACTTTTACTTGGTGTTGC+AGG - chr1_2:58753056-58753075 Msa0080510:intron 40.0%
TGATATGACCTCGAAAGATG+TGG + chr1_2:58753118-58753137 None:intergenic 40.0%
TCGAGGTCATATCAACACTA+AGG - chr1_2:58753124-58753143 Msa0080510:CDS 40.0%
CGAGGTCATATCAACACTAA+GGG - chr1_2:58753125-58753144 Msa0080510:CDS 40.0%
TCATGTTGCGACTTACTCTA+AGG - chr1_2:58753179-58753198 Msa0080510:intron 40.0%
TATGAAGTCAACTCATTCGG+GGG + chr1_2:58753420-58753439 None:intergenic 40.0%
! CCGAATGAGTTGACTTCATA+TGG - chr1_2:58753420-58753439 Msa0080510:CDS 40.0%
! CTCAAGGCACTCTAACATTA+GGG + chr1_2:58753464-58753483 None:intergenic 40.0%
! TCTCAAGGCACTCTAACATT+AGG + chr1_2:58753465-58753484 None:intergenic 40.0%
TGGAGATGCCTAGAGAATAA+AGG - chr1_2:58753572-58753591 Msa0080510:intron 40.0%
GGAGATGCCTAGAGAATAAA+GGG - chr1_2:58753573-58753592 Msa0080510:intron 40.0%
GAGATGCCTAGAGAATAAAG+GGG - chr1_2:58753574-58753593 Msa0080510:intron 40.0%
TCCTAACCCCTTTATTCTCT+AGG + chr1_2:58753583-58753602 None:intergenic 40.0%
AGCTATCAAGGATGTGTATG+AGG - chr1_2:58753616-58753635 Msa0080510:intron 40.0%
GCTATCAAGGATGTGTATGA+GGG - chr1_2:58753617-58753636 Msa0080510:intron 40.0%
TAGTCATGCTTGAAGAGTTG+AGG - chr1_2:58753817-58753836 Msa0080510:intron 40.0%
AGTCATGCTTGAAGAGTTGA+GGG - chr1_2:58753818-58753837 Msa0080510:intron 40.0%
AGTTGAGGGAGGAACTAAAT+GGG - chr1_2:58753832-58753851 Msa0080510:intron 40.0%
ATGTCTTGCTTCTACTCAAG+CGG + chr1_2:58753885-58753904 None:intergenic 40.0%
CAAAAGGTGAAGTTCTACCT+TGG - chr1_2:58753927-58753946 Msa0080510:intron 40.0%
ATATCCAACTTTCACCTCCA+AGG + chr1_2:58753947-58753966 None:intergenic 40.0%
GTCAGACTAGTGATGTTGTA+TGG - chr1_2:58754150-58754169 Msa0080510:CDS 40.0%
GGATGAGTGGTAAGATTAGA+CGG - chr1_2:58754244-58754263 Msa0080510:CDS 40.0%
! GTGGTAAGATTAGACGGATT+AGG - chr1_2:58754250-58754269 Msa0080510:CDS 40.0%
ATGACACCATTAGAGAGAGT+TGG - chr1_2:58754280-58754299 Msa0080510:intron 40.0%
TGACACCATTAGAGAGAGTT+GGG - chr1_2:58754281-58754300 Msa0080510:intron 40.0%
TGGTAGAAAATAGGCTTAGG+TGG - chr1_2:58754326-58754345 Msa0080510:intron 40.0%
AGTACGAAGAGTAGATCAGA+TGG - chr1_2:58754384-58754403 Msa0080510:intron 40.0%
ATCAAAAGATGTAGAGGCAG+AGG - chr1_2:58754418-58754437 Msa0080510:intron 40.0%
AACTCACACACACAAATGTG+AGG + chr1_2:58754731-58754750 None:intergenic 40.0%
!!! ATGCTTGCCATTTTGTCTAC+AGG - chr1_2:58754758-58754777 Msa0080510:intron 40.0%
GCAAATTGATGCACAGCTTA+GGG + chr1_2:58754805-58754824 None:intergenic 40.0%
TGCAAATTGATGCACAGCTT+AGG + chr1_2:58754806-58754825 None:intergenic 40.0%
AGGTAAAATAACGAAACCGC+AGG + chr1_2:58754956-58754975 None:intergenic 40.0%
! TGCATTGTTGTTGTCCTTCA+AGG - chr1_2:58755023-58755042 Msa0080510:intron 40.0%
! TATCCAAGGCTAGCAGATTT+TGG - chr1_2:58755673-58755692 Msa0080510:CDS 40.0%
!!! GATTTTGGAGCTGCAATATC+TGG - chr1_2:58755688-58755707 Msa0080510:CDS 40.0%
!!! TTTTGGAGCTGCAATATCTG+GGG - chr1_2:58755690-58755709 Msa0080510:CDS 40.0%
!! CGAGTTGGTAAAGAAAGAGA+TGG - chr1_2:58755937-58755956 Msa0080510:intron 40.0%
! ACAAGCTTGTCTAGGATTTG+AGG + chr1_2:58756187-58756206 None:intergenic 40.0%
GAACTGTCAATCATGAGTTC+AGG + chr1_2:58756444-58756463 None:intergenic 40.0%
TATAGTTTATCCTGTGGTCG+AGG - chr1_2:58756481-58756500 Msa0080510:intron 40.0%
! GTTTGTTTCTCGAAGGACTT+CGG - chr1_2:58756789-58756808 Msa0080510:intron 40.0%
! TTTGTTTCTCGAAGGACTTC+GGG - chr1_2:58756790-58756809 Msa0080510:intron 40.0%
TCAACCAGTCCAAGTAGTTA+CGG + chr1_2:58757189-58757208 None:intergenic 40.0%
AGATTTCGATGTATGCCTCA+TGG - chr1_2:58757276-58757295 Msa0080510:intron 40.0%
TTGCTGAAACCTTGTTCTAG+GGG + chr1_2:58757313-58757332 None:intergenic 40.0%
CTTGCTGAAACCTTGTTCTA+GGG + chr1_2:58757314-58757333 None:intergenic 40.0%
TCTTGCTGAAACCTTGTTCT+AGG + chr1_2:58757315-58757334 None:intergenic 40.0%
TCACAACAGATTCAGACTCA+TGG + chr1_2:58757431-58757450 None:intergenic 40.0%
TGAGAACTTTCATGTCACTC+GGG - chr1_2:58757451-58757470 Msa0080510:intron 40.0%
GACATGAAAGTTCTCATCAC+TGG + chr1_2:58757447-58757466 None:intergenic 40.0%
ATAGCTGTTGGGAAATTGAG+AGG - chr1_2:58757736-58757755 Msa0080510:intron 40.0%
TAGCTGTTGGGAAATTGAGA+GGG - chr1_2:58757737-58757756 Msa0080510:intron 40.0%
AAATTGAGAGGGACTTCACA+AGG - chr1_2:58757748-58757767 Msa0080510:intron 40.0%
TAAACACCCAGAAAAACCTG+AGG + chr1_2:58757799-58757818 None:intergenic 40.0%
ACCAAATGGTTTCTTGAACC+AGG - chr1_2:58757904-58757923 Msa0080510:intron 40.0%
AATAGCACACAATTCAGAGC+AGG + chr1_2:58758035-58758054 None:intergenic 40.0%
! TGCTCTGAATTGTGTGCTAT+TGG - chr1_2:58758034-58758053 Msa0080510:intron 40.0%
TATTACAGGCATGCTTGACT+TGG - chr1_2:58758107-58758126 Msa0080510:intron 40.0%
GCGTACAATACATCAATTGG+TGG + chr1_2:58758226-58758245 None:intergenic 40.0%
GCTGCGTACAATACATCAAT+TGG + chr1_2:58758229-58758248 None:intergenic 40.0%
CTTGTGTCAAAAACAGGGTA+AGG + chr1_2:58758251-58758270 None:intergenic 40.0%
CAGCTTCTTGTGTCAAAAAC+AGG + chr1_2:58758257-58758276 None:intergenic 40.0%
!!! CAGGAACAAAGTTAGCCTTT+TGG + chr1_2:58758489-58758508 None:intergenic 40.0%
CAGAGAATCGGAAGAACTTA+CGG + chr1_2:58758605-58758624 None:intergenic 40.0%
AAGTTCTTCCGATTCTCTGT+TGG - chr1_2:58758606-58758625 Msa0080510:intron 40.0%
CTAATCCTCCAACAGAGAAT+CGG + chr1_2:58758617-58758636 None:intergenic 40.0%
GTATCAATTCAGCCTAGTGA+AGG + chr1_2:58758676-58758695 None:intergenic 40.0%
ACACCACCACACTATATAAC+TGG + chr1_2:58758698-58758717 None:intergenic 40.0%
! ACATATATAGGTGCTATGCC+AGG - chr1_2:58758758-58758777 Msa0080510:intron 40.0%
GGTACAATGCCTTAAGAATG+TGG - chr1_2:58758787-58758806 Msa0080510:intron 40.0%
GAAAATTAGCATTCTGCTCG+GGG + chr1_2:58759108-58759127 None:intergenic 40.0%
! CGAGCAGAATGCTAATTTTC+TGG - chr1_2:58759108-58759127 Msa0080510:intron 40.0%
TGTTTGCACTGCAAATGTAG+TGG - chr1_2:58759326-58759345 Msa0080510:intron 40.0%
GATGATACCAAATCCCCTAT+TGG - chr1_2:58759350-58759369 Msa0080510:intron 40.0%
TACCAAATCCCCTATTGGAT+AGG - chr1_2:58759355-58759374 Msa0080510:intron 40.0%
ATCCTATCCAATAGGGGATT+TGG + chr1_2:58759360-58759379 None:intergenic 40.0%
AAATCCCCTATTGGATAGGA+TGG - chr1_2:58759359-58759378 Msa0080510:intron 40.0%
AACCTCCATCCTATCCAATA+GGG + chr1_2:58759367-58759386 None:intergenic 40.0%
ATGGAGGTTGTTACTATTGC+TGG - chr1_2:58759378-58759397 Msa0080510:intron 40.0%
TGGAGGTTGTTACTATTGCT+GGG - chr1_2:58759379-58759398 Msa0080510:intron 40.0%
GCACATTGCAAGAGATTATC+TGG - chr1_2:58759422-58759441 Msa0080510:intron 40.0%
AAAACTACACGTGAAGCATG+TGG - chr1_2:58759447-58759466 Msa0080510:intron 40.0%
TGAAGCATGTGGAATAAAGC+CGG - chr1_2:58759458-58759477 Msa0080510:intron 40.0%
! TTTCTTTTCCACCCGTTTAC+AGG - chr1_2:58759491-58759510 Msa0080510:intron 40.0%
! TTCTTTTCCACCCGTTTACA+GGG - chr1_2:58759492-58759511 Msa0080510:intron 40.0%
AGGAAAAGGAACCCTGTAAA+CGG + chr1_2:58759506-58759525 None:intergenic 40.0%
!! AATTAACTTGCTACAGGTGG+AGG - chr1_2:58759605-58759624 Msa0080510:CDS 40.0%
GAAAACTATTGCCGAGAATC+AGG - chr1_2:58759657-58759676 Msa0080510:CDS 40.0%
TTGCTACTCTCTATCAACAC+GGG + chr1_2:58760039-58760058 None:intergenic 40.0%
! GAGTTTTCATCGGTATGTTC+AGG + chr1_2:58760063-58760082 None:intergenic 40.0%
TGAGATGAACACAAATCCAC+CGG - chr1_2:58760092-58760111 Msa0080510:CDS 40.0%
AGTGCAATGATAACATGCGT+AGG - chr1_2:58760567-58760586 Msa0080510:intron 40.0%
GATGATTGAAGTCTTCATGC+AGG + chr1_2:58760839-58760858 None:intergenic 40.0%
TGAATCGAAGACTGTTGAGA+AGG - chr1_2:58761013-58761032 Msa0080510:intron 40.0%
AACACCTATTGGCGTTGTTA+TGG - chr1_2:58761109-58761128 Msa0080510:intron 40.0%
ACACCTATTGGCGTTGTTAT+GGG - chr1_2:58761110-58761129 Msa0080510:intron 40.0%
AAATCTGTTGAACAAGGGGA+CGG - chr1_2:58761179-58761198 Msa0080510:intron 40.0%
!! AAAGGAGCATTGCATATCAC+CGG - chr1_2:58761203-58761222 Msa0080510:intron 40.0%
TTGCATATCACCGGTCAATT+AGG - chr1_2:58761212-58761231 Msa0080510:intron 40.0%
TTTCTCCCGTAGTATATCTC+TGG + chr1_2:58761279-58761298 None:intergenic 40.0%
!!! TTGGCAAAGAAAGCGTTTTC+TGG + chr1_2:58761305-58761324 None:intergenic 40.0%
ATTGCTAGATCCTTCTTCAC+AGG + chr1_2:58761431-58761450 None:intergenic 40.0%
AAGAAGGATCTAGCAATGAC+TGG - chr1_2:58761434-58761453 Msa0080510:intron 40.0%
AGAAGGATCTAGCAATGACT+GGG - chr1_2:58761435-58761454 Msa0080510:intron 40.0%
TCGTCATCTTTAATGGTCAC+TGG - chr1_2:58761555-58761574 Msa0080510:intron 40.0%
! AACCTGCAATTTTCACAGCA+TGG + chr1_2:58761782-58761801 None:intergenic 40.0%
GCTGTGAAAATTGCAGGTTA+AGG - chr1_2:58761783-58761802 Msa0080510:CDS 40.0%
AGTAAATCACTAATGCCGGT+AGG - chr1_2:58761986-58762005 Msa0080510:CDS 40.0%
GTTTCATCTCAAGATCCTAC+CGG + chr1_2:58762004-58762023 None:intergenic 40.0%
! TTTTCTATTGAGCTGGGAAC+CGG - chr1_2:58762028-58762047 Msa0080510:CDS 40.0%
! ACATATTTTGCCCTGAACAC+GGG + chr1_2:58762117-58762136 None:intergenic 40.0%
! TTTTACAACTGGGATACACC+AGG + chr1_2:58762154-58762173 None:intergenic 40.0%
ATTCAGTTCCGCGACAAGAA+AGG - chr1_2:58750462-58750481 Msa0080510:three_prime_UTR 45.0%
GGATAGACGAGGGTTTATGA+AGG - chr1_2:58750531-58750550 Msa0080510:three_prime_UTR 45.0%
! AACTCTAAGAAGCGGAGATG+CGG + chr1_2:58750808-58750827 None:intergenic 45.0%
!! ATTCTCTCAGCGGATTGAGT+CGG - chr1_2:58750832-58750851 Msa0080510:CDS 45.0%
GAGTCGGAGTCATCGTTATT+TGG - chr1_2:58750848-58750867 Msa0080510:CDS 45.0%
GGAGTCATCGTTATTTGGGA+GGG - chr1_2:58750853-58750872 Msa0080510:CDS 45.0%
TCAGCATCAACCACATGATC+GGG + chr1_2:58750918-58750937 None:intergenic 45.0%
! ATCTTCAGGTCTGGGATAAG+TGG + chr1_2:58750994-58751013 None:intergenic 45.0%
GTGAGGTAATCTTCAGGTCT+GGG + chr1_2:58751002-58751021 None:intergenic 45.0%
AGTGAGGTAATCTTCAGGTC+TGG + chr1_2:58751003-58751022 None:intergenic 45.0%
CCAACAGTGAGGTAATCTTC+AGG + chr1_2:58751008-58751027 None:intergenic 45.0%
CCTGAAGATTACCTCACTGT+TGG - chr1_2:58751005-58751024 Msa0080510:intron 45.0%
TTGCTTCGATGGGATCTTGT+TGG - chr1_2:58751541-58751560 Msa0080510:CDS 45.0%
AGTTCGGAGAGAAAGACAGA+AGG + chr1_2:58751720-58751739 None:intergenic 45.0%
! CAACATAGACCTCTTTTCCC+AGG - chr1_2:58752060-58752079 Msa0080510:intron 45.0%
CTTTGCTCATTACAGGCTTC+TGG - chr1_2:58752147-58752166 Msa0080510:intron 45.0%
! TGGCTCATCTTTAAGGAGGA+AGG + chr1_2:58752446-58752465 None:intergenic 45.0%
! AGTCTGGCTCATCTTTAAGG+AGG + chr1_2:58752450-58752469 None:intergenic 45.0%
! CAGAGTCTGGCTCATCTTTA+AGG + chr1_2:58752453-58752472 None:intergenic 45.0%
ACTACATTGGGATCAGAGTC+TGG + chr1_2:58752466-58752485 None:intergenic 45.0%
GAGTCCCAACTTCATGAAGA+CGG + chr1_2:58752546-58752565 None:intergenic 45.0%
CCCCATGGATACTTGAAATC+TGG + chr1_2:58752685-58752704 None:intergenic 45.0%
ACGTCTGCGCATAACAGATA+TGG - chr1_2:58752730-58752749 Msa0080510:CDS 45.0%
CTGCGCATAACAGATATGGT+AGG - chr1_2:58752734-58752753 Msa0080510:CDS 45.0%
! TCCTTATTTGCAGGTTAGCG+AGG - chr1_2:58752906-58752925 Msa0080510:intron 45.0%
TCCTCGCTAACCTGCAAATA+AGG + chr1_2:58752910-58752929 None:intergenic 45.0%
CATAAAGGCCACATCTTTCG+AGG - chr1_2:58753107-58753126 Msa0080510:CDS 45.0%
GCCTAGAGAATAAAGGGGTT+AGG - chr1_2:58753579-58753598 Msa0080510:intron 45.0%
TTCAACTAGTGTGAGGATGC+AGG - chr1_2:58753643-58753662 Msa0080510:CDS 45.0%
GAGTTGAGGGAGGAACTAAA+TGG - chr1_2:58753831-58753850 Msa0080510:intron 45.0%
TTGCTTCTACTCAAGCGGTA+AGG + chr1_2:58753880-58753899 None:intergenic 45.0%
AAGGTGAAGTTCTACCTTGG+AGG - chr1_2:58753930-58753949 Msa0080510:intron 45.0%
TCTACCTTGGAGGTGAAAGT+TGG - chr1_2:58753940-58753959 Msa0080510:intron 45.0%
TGTTGTATGGTGCAGAGTGT+TGG - chr1_2:58754163-58754182 Msa0080510:CDS 45.0%
! GTTGTATGGTGCAGAGTGTT+GGG - chr1_2:58754164-58754183 Msa0080510:CDS 45.0%
CGCTTACTTGATTCTCGTGT+TGG + chr1_2:58754200-58754219 None:intergenic 45.0%
TCAAGTAAGCGTAGACGAGA+TGG - chr1_2:58754209-58754228 Msa0080510:CDS 45.0%
CAAGTAAGCGTAGACGAGAT+GGG - chr1_2:58754210-58754229 Msa0080510:CDS 45.0%
AAGTAAGCGTAGACGAGATG+GGG - chr1_2:58754211-58754230 Msa0080510:CDS 45.0%
GACACCATTAGAGAGAGTTG+GGG - chr1_2:58754282-58754301 Msa0080510:intron 45.0%
CTTCGTACTACAGTGTCTAC+AGG + chr1_2:58754373-58754392 None:intergenic 45.0%
ACGAAGAGTAGATCAGATGG+AGG - chr1_2:58754387-58754406 Msa0080510:intron 45.0%
AAATGCCGACATTGCTAGGT+TGG - chr1_2:58754677-58754696 Msa0080510:intron 45.0%
CTGAGTTCAAACCTAGGTGA+AGG + chr1_2:58754706-58754725 None:intergenic 45.0%
CTTCACCTAGGTTTGAACTC+AGG - chr1_2:58754704-58754723 Msa0080510:intron 45.0%
!! ATGAAGTAAAGGCGCTTCGT+AGG - chr1_2:58755058-58755077 Msa0080510:CDS 45.0%
TATGAGAAACAAGAGGCCAG+TGG + chr1_2:58755084-58755103 None:intergenic 45.0%
AGTTTGCGAACGCATAGATG+TGG - chr1_2:58755105-58755124 Msa0080510:CDS 45.0%
CCAGCTCTTCAAGAACTTGT+TGG + chr1_2:58755732-58755751 None:intergenic 45.0%
CCAACAAGTTCTTGAAGAGC+TGG - chr1_2:58755729-58755748 Msa0080510:intron 45.0%
CCACAAAGTCGATGTCTCTT+AGG + chr1_2:58755779-58755798 None:intergenic 45.0%
!! CCTAAGAGACATCGACTTTG+TGG - chr1_2:58755776-58755795 Msa0080510:intron 45.0%
GCAGCTTAAGGCCATAAAGA+AGG - chr1_2:58756126-58756145 Msa0080510:intron 45.0%
TTAGGGGTTCTGCAAAGCAA+TGG + chr1_2:58756407-58756426 None:intergenic 45.0%
CTATTTGCAGGAATTGGGAC+TGG - chr1_2:58756647-58756666 Msa0080510:intron 45.0%
!! AGGTGCTACACCAGTCTTTT+GGG + chr1_2:58756752-58756771 None:intergenic 45.0%
!! TAGGTGCTACACCAGTCTTT+TGG + chr1_2:58756753-58756772 None:intergenic 45.0%
AACACCTTGCCTACGTGTAT+AGG + chr1_2:58756772-58756791 None:intergenic 45.0%
! GCAAGGTGTTTGTTTCTCGA+AGG - chr1_2:58756782-58756801 Msa0080510:intron 45.0%
! TTGTTTCTCGAAGGACTTCG+GGG - chr1_2:58756791-58756810 Msa0080510:intron 45.0%
CAGTGTTACCCGTAACTACT+TGG - chr1_2:58757177-58757196 Msa0080510:intron 45.0%
TTACCCGTAACTACTTGGAC+TGG - chr1_2:58757182-58757201 Msa0080510:intron 45.0%
CAACCAGTCCAAGTAGTTAC+GGG + chr1_2:58757188-58757207 None:intergenic 45.0%
ACAAACCTGTATTCACCCCA+AGG + chr1_2:58757220-58757239 None:intergenic 45.0%
! TGCTGAAACCTTGTTCTAGG+GGG + chr1_2:58757312-58757331 None:intergenic 45.0%
GCCTGGTTCAAGAAACCATT+TGG + chr1_2:58757908-58757927 None:intergenic 45.0%
CTTAATGAGAGCAACTAGCC+TGG + chr1_2:58757925-58757944 None:intergenic 45.0%
GTTGTTGTCACGTGACTGAA+AGG + chr1_2:58758302-58758321 None:intergenic 45.0%
!! AAGCCTTTGGTGCTTGCTTA+CGG - chr1_2:58758457-58758476 Msa0080510:intron 45.0%
TGCTTACGGTCTTTGCCAAA+AGG - chr1_2:58758471-58758490 Msa0080510:intron 45.0%
! GTATTGGCCGTTCAATTGCA+CGG - chr1_2:58758571-58758590 Msa0080510:intron 45.0%
TATTGGCCGTTCAATTGCAC+GGG - chr1_2:58758572-58758591 Msa0080510:intron 45.0%
TCGGAAGAACTTACGGTTCA+AGG + chr1_2:58758598-58758617 None:intergenic 45.0%
TTCTTCCGATTCTCTGTTGG+AGG - chr1_2:58758609-58758628 Msa0080510:intron 45.0%
!! TGTTGGAGGATTAGCTGATG+TGG - chr1_2:58758623-58758642 Msa0080510:intron 45.0%
AGCTGATGTGGCTGAAATCA+AGG - chr1_2:58758635-58758654 Msa0080510:intron 45.0%
! GGGCATCGTCGAACATATAT+AGG - chr1_2:58758746-58758765 Msa0080510:intron 45.0%
! AGGCATTGTACCATCTTTCC+TGG + chr1_2:58758779-58758798 None:intergenic 45.0%
TGGCTGTTCCCACATTCTTA+AGG + chr1_2:58758799-58758818 None:intergenic 45.0%
CGATGGGAACATCAAGATAG+TGG + chr1_2:58759135-58759154 None:intergenic 45.0%
TGTTCCCATCGATCTATCGA+AGG - chr1_2:58759144-58759163 Msa0080510:intron 45.0%
CCAACCTTCGATAGATCGAT+GGG + chr1_2:58759151-58759170 None:intergenic 45.0%
ACCAACCTTCGATAGATCGA+TGG + chr1_2:58759152-58759171 None:intergenic 45.0%
CTGGGTGGTTATGTAAGAGT+CGG - chr1_2:58759182-58759201 Msa0080510:intron 45.0%
TTCCAGTGCATCAGTTGTCA+TGG + chr1_2:58759287-58759306 None:intergenic 45.0%
ACCTCCATCCTATCCAATAG+GGG + chr1_2:58759366-58759385 None:intergenic 45.0%
CAACCTCCATCCTATCCAAT+AGG + chr1_2:58759368-58759387 None:intergenic 45.0%
GGAAAAGGAACCCTGTAAAC+GGG + chr1_2:58759505-58759524 None:intergenic 45.0%
GGTTTCTGACTCCTGATTCT+CGG + chr1_2:58759671-58759690 None:intergenic 45.0%
TGCTACTCTCTATCAACACG+GGG + chr1_2:58760038-58760057 None:intergenic 45.0%
ACACAGAGAGATTGATCTGC+CGG + chr1_2:58760114-58760133 None:intergenic 45.0%
CGGTGGACCACATAAAAGTA+AGG + chr1_2:58760916-58760935 None:intergenic 45.0%
AGTCCCATAACAACGCCAAT+AGG + chr1_2:58761116-58761135 None:intergenic 45.0%
CTTCTTCACAGGCTTCTTCA+AGG + chr1_2:58761420-58761439 None:intergenic 45.0%
CTTGAAGAAGCCTGTGAAGA+AGG - chr1_2:58761418-58761437 Msa0080510:intron 45.0%
GAAGGATCTAGCAATGACTG+GGG - chr1_2:58761436-58761455 Msa0080510:intron 45.0%
ACAGGGAAGATTCTTCCCAT+TGG - chr1_2:58761470-58761489 Msa0080510:intron 45.0%
TTTCAACATACCCCGCCAAT+GGG + chr1_2:58761488-58761507 None:intergenic 45.0%
! TTTTCAACATACCCCGCCAA+TGG + chr1_2:58761489-58761508 None:intergenic 45.0%
TGCCATGCTGTGAAAATTGC+AGG - chr1_2:58761777-58761796 Msa0080510:CDS 45.0%
TATTGCTGCAAGAAGGAGTG+AGG - chr1_2:58761813-58761832 Msa0080510:CDS 45.0%
ATTCATCTTGTCCCGTGTTC+AGG - chr1_2:58762103-58762122 Msa0080510:five_prime_UTR 45.0%
TTCATCTTGTCCCGTGTTCA+GGG - chr1_2:58762104-58762123 Msa0080510:five_prime_UTR 45.0%
!!! ATAATAATTTTTTTTTTTGA+AGG + chr1_2:58751499-58751518 None:intergenic 5.0%
!! TATATATATATATATTCAAA+TGG + chr1_2:58755165-58755184 None:intergenic 5.0%
!! TATTTATTCAAATTTATATT+TGG - chr1_2:58762184-58762203 Msa0080510:five_prime_UTR 5.0%
AAGAGTGGCGTGTTCGATTC+TGG + chr1_2:58750576-58750595 None:intergenic 50.0%
AAGCGGAGGAAGAAGAAGAG+TGG + chr1_2:58750591-58750610 None:intergenic 50.0%
!! CATTGATGGTGGAAGCGAAG+CGG + chr1_2:58750608-58750627 None:intergenic 50.0%
TTCGCTTCCACCATCAATGG+TGG - chr1_2:58750609-58750628 Msa0080510:three_prime_UTR 50.0%
GCGATAACCACCATTGATGG+TGG + chr1_2:58750619-58750638 None:intergenic 50.0%
GTGGCGATAACCACCATTGA+TGG + chr1_2:58750622-58750641 None:intergenic 50.0%
CGGAGTCATCGTTATTTGGG+AGG - chr1_2:58750852-58750871 Msa0080510:CDS 50.0%
TTCTGTTCGGAGTCGGAATC+CGG - chr1_2:58750885-58750904 Msa0080510:CDS 50.0%
TGCTGAAGCTAAAGCAGCTG+AGG - chr1_2:58750932-58750951 Msa0080510:CDS 50.0%
AGCTGAGGAAACTCCGTCAA+AGG - chr1_2:58750947-58750966 Msa0080510:CDS 50.0%
GCAGAAGAAGCAGCCTTTGA+CGG + chr1_2:58750963-58750982 None:intergenic 50.0%
CTAGTTTCGGGCTTCTGCAA+TGG - chr1_2:58751412-58751431 Msa0080510:CDS 50.0%
CTTCGATGGGATCTTGTTGG+AGG - chr1_2:58751544-58751563 Msa0080510:CDS 50.0%
! AGTTTAGGGCAGCAATAGGG+AGG + chr1_2:58751870-58751889 None:intergenic 50.0%
CATCCAGGACCCCAAACTAT+TGG - chr1_2:58752375-58752394 Msa0080510:intron 50.0%
TCAGGATCACTTGATCCCCA+TGG + chr1_2:58752700-58752719 None:intergenic 50.0%
GGGGATCAAGTGATCCTGAT+TGG - chr1_2:58752701-58752720 Msa0080510:CDS 50.0%
TTGGAACATGGGAATGGGGA+AGG - chr1_2:58753235-58753254 Msa0080510:intron 50.0%
TGGAACATGGGAATGGGGAA+GGG - chr1_2:58753236-58753255 Msa0080510:intron 50.0%
AGGGAGCTTCAACTAGTGTG+AGG - chr1_2:58753636-58753655 Msa0080510:CDS 50.0%
AACTAGTGTGAGGATGCAGG+AGG - chr1_2:58753646-58753665 Msa0080510:CDS 50.0%
ACTAGTGTGAGGATGCAGGA+GGG - chr1_2:58753647-58753666 Msa0080510:CDS 50.0%
! CGGTGCTAACTGCTAACTCT+TGG + chr1_2:58753772-58753791 None:intergenic 50.0%
CATGCTTGAAGAGTTGAGGG+AGG - chr1_2:58753821-58753840 Msa0080510:intron 50.0%
TGAGGGAGGAACTAAATGGG+AGG - chr1_2:58753835-58753854 Msa0080510:intron 50.0%
ACGAGATGGGGATGTTGCAT+TGG - chr1_2:58754223-58754242 Msa0080510:CDS 50.0%
GGGATGTTGCATTGGATGAG+TGG - chr1_2:58754231-58754250 Msa0080510:CDS 50.0%
GCTACCCCAACTCTCTCTAA+TGG + chr1_2:58754289-58754308 None:intergenic 50.0%
! GGTGGTTTGTGCATGTAGAG+AGG - chr1_2:58754344-58754363 Msa0080510:intron 50.0%
GGTGTCCAACCTAGCAATGT+CGG + chr1_2:58754685-58754704 None:intergenic 50.0%
! TAGGTTGGACACCTTCACCT+AGG - chr1_2:58754692-58754711 Msa0080510:intron 50.0%
GAGGTCCTGAGTTCAAACCT+AGG + chr1_2:58754712-58754731 None:intergenic 50.0%
! GCTCCAAAATCTGCTAGCCT+TGG + chr1_2:58755679-58755698 None:intergenic 50.0%
! TCCTGTGGTCGAGGAAGTTT+TGG - chr1_2:58756490-58756509 Msa0080510:intron 50.0%
ACCAAAACTTCCTCGACCAC+AGG + chr1_2:58756494-58756513 None:intergenic 50.0%
GACGACAAGACAGCACTTAC+AGG - chr1_2:58756675-58756694 Msa0080510:CDS 50.0%
TTGTTCCCTGCCCAAAAGAC+TGG - chr1_2:58756739-58756758 Msa0080510:intron 50.0%
! CTACACCAGTCTTTTGGGCA+GGG + chr1_2:58756747-58756766 None:intergenic 50.0%
GGTGTAGCACCTATACACGT+AGG - chr1_2:58756760-58756779 Msa0080510:intron 50.0%
AGCACCTATACACGTAGGCA+AGG - chr1_2:58756765-58756784 Msa0080510:intron 50.0%
! GGTGGGCATTTTTCTCGCTT+AGG + chr1_2:58757088-58757107 None:intergenic 50.0%
ACTCGCAAAGCTACAGCTGT+TGG - chr1_2:58757135-58757154 Msa0080510:intron 50.0%
!! GCTGAAACCTTGTTCTAGGG+GGG + chr1_2:58757311-58757330 None:intergenic 50.0%
!! ACAGGCATGCTTGACTTGGT+CGG - chr1_2:58758111-58758130 Msa0080510:intron 50.0%
TTCAGTCATGATAGGCAGCC+CGG - chr1_2:58758169-58758188 Msa0080510:intron 50.0%
AAGGTCACGGGTTCAAGTAC+TGG + chr1_2:58758283-58758302 None:intergenic 50.0%
TCACGTGACTGAAAGGTCAC+GGG + chr1_2:58758295-58758314 None:intergenic 50.0%
GTCACGTGACTGAAAGGTCA+CGG + chr1_2:58758296-58758315 None:intergenic 50.0%
ACAACTTTACCGTTGCGCCA+AGG - chr1_2:58758317-58758336 Msa0080510:intron 50.0%
!! GAATTTTAAAGGCGGGGCCT+TGG + chr1_2:58758337-58758356 None:intergenic 50.0%
AGACCGTAAGCAAGCACCAA+AGG + chr1_2:58758463-58758482 None:intergenic 50.0%
! ATCTGTCTTTCTGGTCCACC+AGG - chr1_2:58758534-58758553 Msa0080510:intron 50.0%
!! ATACTCGTTTTTCCCACGCC+TGG + chr1_2:58758555-58758574 None:intergenic 50.0%
GGCGTGGGAAAAACGAGTAT+TGG - chr1_2:58758555-58758574 Msa0080510:intron 50.0%
TCAAGGCCCGTGCAATTGAA+CGG + chr1_2:58758581-58758600 None:intergenic 50.0%
! AGGTGCTATGCCAGGAAAGA+TGG - chr1_2:58758766-58758785 Msa0080510:intron 50.0%
! CCAGGAGAGCGTATACCAAA+GGG + chr1_2:58758913-58758932 None:intergenic 50.0%
! ACCAGGAGAGCGTATACCAA+AGG + chr1_2:58758914-58758933 None:intergenic 50.0%
TAGTTGGGCAAAGGACATGC+CGG - chr1_2:58759049-58759068 Msa0080510:intron 50.0%
! CAAAGCACTTGCTGGATCAC+CGG + chr1_2:58759071-58759090 None:intergenic 50.0%
! AGCTCTAGCAAAGCACTTGC+TGG + chr1_2:58759079-58759098 None:intergenic 50.0%
CCCATCGATCTATCGAAGGT+TGG - chr1_2:58759148-58759167 Msa0080510:intron 50.0%
GACCATGACAACTGATGCAC+TGG - chr1_2:58759282-58759301 Msa0080510:intron 50.0%
ATGCACTGGAATCATGCTGC+AGG - chr1_2:58759296-58759315 Msa0080510:intron 50.0%
TCCCCTATTGGATAGGATGG+AGG - chr1_2:58759362-58759381 Msa0080510:intron 50.0%
AAAGGAACCCTGTAAACGGG+TGG + chr1_2:58759502-58759521 None:intergenic 50.0%
AGATAGCGCTACGACTTGTG+AGG - chr1_2:58759923-58759942 Msa0080510:intron 50.0%
! CACGGGGTTCCCTTTTTGAA+TGG + chr1_2:58760022-58760041 None:intergenic 50.0%
GATCAAAGATGCGCTCTGCA+TGG + chr1_2:58761088-58761107 None:intergenic 50.0%
GTTGAACAAGGGGACGGAAA+AGG - chr1_2:58761185-58761204 Msa0080510:intron 50.0%
TTTCACCTCCATGTTCCTGC+AGG - chr1_2:58761332-58761351 Msa0080510:intron 50.0%
TTCACCTCCATGTTCCTGCA+GGG - chr1_2:58761333-58761352 Msa0080510:intron 50.0%
GGCAAGGGACAACATAGAAG+TGG + chr1_2:58761399-58761418 None:intergenic 50.0%
CACAGGCTTCTTCAAGGCAA+GGG + chr1_2:58761414-58761433 None:intergenic 50.0%
TCACAGGCTTCTTCAAGGCA+AGG + chr1_2:58761415-58761434 None:intergenic 50.0%
ACTGGGGAAGTGACACTTAC+AGG - chr1_2:58761452-58761471 Msa0080510:intron 50.0%
CTGGGGAAGTGACACTTACA+GGG - chr1_2:58761453-58761472 Msa0080510:intron 50.0%
GGGAAGATTCTTCCCATTGG+CGG - chr1_2:58761473-58761492 Msa0080510:intron 50.0%
GGAAGATTCTTCCCATTGGC+GGG - chr1_2:58761474-58761493 Msa0080510:intron 50.0%
GAAGATTCTTCCCATTGGCG+GGG - chr1_2:58761475-58761494 Msa0080510:intron 50.0%
!! GGTCACTGGTTTCCAAGTTC+TGG - chr1_2:58761569-58761588 Msa0080510:intron 50.0%
CGCTTCGCTTCCACCATCAA+TGG - chr1_2:58750606-58750625 Msa0080510:three_prime_UTR 55.0%
GGTTAAGCGGTGGATGCAAG+AGG + chr1_2:58750748-58750767 None:intergenic 55.0%
AAGAAGCGGAGATGCGGAGT+CGG + chr1_2:58750802-58750821 None:intergenic 55.0%
! AGTTTGGGGTCCTGGATGCA+TGG + chr1_2:58752373-58752392 None:intergenic 55.0%
! CTGCCAATAGTTTGGGGTCC+TGG + chr1_2:58752381-58752400 None:intergenic 55.0%
GATCGACAAGCCCCTTATGC+TGG - chr1_2:58752418-58752437 Msa0080510:intron 55.0%
!! GAGGAAGGCACCAGCATAAG+GGG + chr1_2:58752431-58752450 None:intergenic 55.0%
!! GGAGGAAGGCACCAGCATAA+GGG + chr1_2:58752432-58752451 None:intergenic 55.0%
!! AGGAGGAAGGCACCAGCATA+AGG + chr1_2:58752433-58752452 None:intergenic 55.0%
GCAGACGTCGATGACCAATC+AGG + chr1_2:58752718-58752737 None:intergenic 55.0%
GGAACATGGGAATGGGGAAG+GGG - chr1_2:58753237-58753256 Msa0080510:intron 55.0%
CTAGTGTGAGGATGCAGGAG+GGG - chr1_2:58753648-58753667 Msa0080510:CDS 55.0%
TAGTGTGAGGATGCAGGAGG+GGG - chr1_2:58753649-58753668 Msa0080510:CDS 55.0%
AAGGGCTTAGGGTTGACCCT+TGG + chr1_2:58753709-58753728 None:intergenic 55.0%
!! GTATGGTGCAGAGTGTTGGG+AGG - chr1_2:58754167-58754186 Msa0080510:CDS 55.0%
! GCTACACCAGTCTTTTGGGC+AGG + chr1_2:58756748-58756767 None:intergenic 55.0%
CGCAAAGCTACAGCTGTTGG+AGG - chr1_2:58757138-58757157 Msa0080510:intron 55.0%
ACTGGTTGACTGCACTGCCT+TGG - chr1_2:58757200-58757219 Msa0080510:intron 55.0%
CTGGTTGACTGCACTGCCTT+GGG - chr1_2:58757201-58757220 Msa0080510:intron 55.0%
TGGTTGACTGCACTGCCTTG+GGG - chr1_2:58757202-58757221 Msa0080510:intron 55.0%
CACTGCCTTGGGGTGAATAC+AGG - chr1_2:58757212-58757231 Msa0080510:intron 55.0%
!! CAGGCATGCTTGACTTGGTC+GGG - chr1_2:58758112-58758131 Msa0080510:intron 55.0%
CAATTGGTGGGATCCCTTCC+CGG + chr1_2:58758213-58758232 None:intergenic 55.0%
CCCTTTGGTATACGCTCTCC+TGG - chr1_2:58758910-58758929 Msa0080510:intron 55.0%
TAGCATTCTGCTCGGGGTCT+AGG + chr1_2:58759102-58759121 None:intergenic 55.0%
CAGAGAGATTGATCTGCCGG+TGG + chr1_2:58760111-58760130 None:intergenic 55.0%
ATGCGCTCTGCATGGAAGAC+AGG + chr1_2:58761080-58761099 None:intergenic 55.0%
GCGTTGTTATGGGACTTGCC+TGG - chr1_2:58761120-58761139 Msa0080510:intron 55.0%
GGACTTGCCTGGACTGCAAT+GGG - chr1_2:58761131-58761150 Msa0080510:intron 55.0%
TCACCTCCATGTTCCTGCAG+GGG - chr1_2:58761334-58761353 Msa0080510:intron 55.0%
CCAGCACTTGGTCCATCCTT+TGG + chr1_2:58761365-58761384 None:intergenic 55.0%
CCAAAGGATGGACCAAGTGC+TGG - chr1_2:58761362-58761381 Msa0080510:intron 55.0%
GTCATCGTGCAACCAGCACT+TGG + chr1_2:58761377-58761396 None:intergenic 55.0%
!! TGATGGTGGAAGCGAAGCGG+AGG + chr1_2:58750605-58750624 None:intergenic 60.0%
!! AAAGGCGCTTCGTAGGCCAC+TGG - chr1_2:58755065-58755084 Msa0080510:CDS 60.0%
AACGCAGCCCCCCTAGAACA+AGG - chr1_2:58757301-58757320 Msa0080510:intron 60.0%
TTCCCGGACCCTGCATATGC+GGG + chr1_2:58758197-58758216 None:intergenic 60.0%
CTTCCCGGACCCTGCATATG+CGG + chr1_2:58758198-58758217 None:intergenic 60.0%
GCATATGCAGGGTCCGGGAA+GGG - chr1_2:58758197-58758216 Msa0080510:intron 60.0%
! TCTTTCTGGTCCACCAGGCG+TGG - chr1_2:58758539-58758558 Msa0080510:intron 60.0%
! CTTTCTGGTCCACCAGGCGT+GGG - chr1_2:58758540-58758559 Msa0080510:intron 60.0%
!! CTCGTTTTTCCCACGCCTGG+TGG + chr1_2:58758552-58758571 None:intergenic 60.0%
GCTACGACTTGTGAGGCACG+TGG - chr1_2:58759930-58759949 Msa0080510:intron 60.0%
GGGACTTGCCTGGACTGCAA+TGG - chr1_2:58761130-58761149 Msa0080510:intron 60.0%
CTTGCCTGGACTGCAATGGG+CGG - chr1_2:58761134-58761153 Msa0080510:intron 60.0%
TAGCCCCTGCAGGAACATGG+AGG + chr1_2:58761340-58761359 None:intergenic 60.0%
GTGTAGCCCCTGCAGGAACA+TGG + chr1_2:58761343-58761362 None:intergenic 60.0%
TCCTGCAGGGGCTACACCAA+AGG - chr1_2:58761346-58761365 Msa0080510:intron 60.0%
! TCCTTTGGTGTAGCCCCTGC+AGG + chr1_2:58761350-58761369 None:intergenic 60.0%
GCAGGGGCTACACCAAAGGA+TGG - chr1_2:58761350-58761369 Msa0080510:intron 60.0%
TCGGATGCCGGTCGGAGAAC+CGG + chr1_2:58750783-58750802 None:intergenic 65.0%
ATGCGGAGTCGGATGCCGGT+CGG + chr1_2:58750791-58750810 None:intergenic 65.0%
GGAGATGCGGAGTCGGATGC+CGG + chr1_2:58750795-58750814 None:intergenic 65.0%
TCGGAGTCGGAATCCGGCGA+CGG - chr1_2:58750891-58750910 Msa0080510:CDS 65.0%
CACATGATCGGGTCCGTCGC+CGG + chr1_2:58750907-58750926 None:intergenic 65.0%
ACCCTGCATATGCGGGCACC+GGG + chr1_2:58758190-58758209 None:intergenic 65.0%
GACCCTGCATATGCGGGCAC+CGG + chr1_2:58758191-58758210 None:intergenic 65.0%
GTGCCCGCATATGCAGGGTC+CGG - chr1_2:58758191-58758210 Msa0080510:intron 65.0%
TGCCCGCATATGCAGGGTCC+GGG - chr1_2:58758192-58758211 Msa0080510:intron 65.0%
CGCATATGCAGGGTCCGGGA+AGG - chr1_2:58758196-58758215 Msa0080510:intron 65.0%
GGATCCGCCCATTGCAGTCC+AGG + chr1_2:58761141-58761160 None:intergenic 65.0%
GAACCGCGGCGGGGGTTAAG+CGG + chr1_2:58750761-58750780 None:intergenic 70.0%
CTTAACCCCCGCCGCGGTTC+CGG - chr1_2:58750761-58750780 Msa0080510:three_prime_UTR 70.0%
TCGGAGAACCGGAACCGCGG+CGG + chr1_2:58750772-58750791 None:intergenic 70.0%
CGGTCGGAGAACCGGAACCG+CGG + chr1_2:58750775-58750794 None:intergenic 70.0%
CGCGGTTCCGGTTCTCCGAC+CGG - chr1_2:58750773-58750792 Msa0080510:three_prime_UTR 70.0%
CGGCGACGGACCCGATCATG+TGG - chr1_2:58750905-58750924 Msa0080510:CDS 70.0%
GGGGGGCTGCGTTCTCCATG+AGG + chr1_2:58757294-58757313 None:intergenic 70.0%
AGCCCGGTGCCCGCATATGC+AGG - chr1_2:58758185-58758204 Msa0080510:intron 70.0%
GCCCGGTGCCCGCATATGCA+GGG - chr1_2:58758186-58758205 Msa0080510:intron 70.0%
AAGGCGGGGCCTTGGCGCAA+CGG + chr1_2:58758329-58758348 None:intergenic 70.0%
CCACCGCTTAACCCCCGCCG+CGG - chr1_2:58750755-58750774 Msa0080510:three_prime_UTR 75.0%
GAGAACCGGAACCGCGGCGG+GGG + chr1_2:58750769-58750788 None:intergenic 75.0%
GGAGAACCGGAACCGCGGCG+GGG + chr1_2:58750770-58750789 None:intergenic 75.0%
CGGAGAACCGGAACCGCGGC+GGG + chr1_2:58750771-58750790 None:intergenic 75.0%
! CCGCGGCGGGGGTTAAGCGG+TGG + chr1_2:58750758-58750777 None:intergenic 80.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 58750449 58762349 58750449 ID=Msa0080510;Name=Msa0080510
chr1_2 mRNA 58750449 58762349 58750449 ID=Msa0080510-mRNA-1;Parent=Msa0080510;Name=Msa0080510-mRNA-1;_AED=0.19;_eAED=0.19;_QI=277|0.84|0.9|0.95|0.94|0.9|20|359|967
chr1_2 exon 58750449 58750999 58750449 ID=Msa0080510-mRNA-1:exon:18915;Parent=Msa0080510-mRNA-1
chr1_2 exon 58751302 58751817 58751302 ID=Msa0080510-mRNA-1:exon:18914;Parent=Msa0080510-mRNA-1
chr1_2 exon 58752640 58752873 58752640 ID=Msa0080510-mRNA-1:exon:18913;Parent=Msa0080510-mRNA-1
chr1_2 exon 58753076 58753177 58753076 ID=Msa0080510-mRNA-1:exon:18912;Parent=Msa0080510-mRNA-1
chr1_2 exon 58753313 58753480 58753313 ID=Msa0080510-mRNA-1:exon:18911;Parent=Msa0080510-mRNA-1
chr1_2 exon 58753633 58753746 58753633 ID=Msa0080510-mRNA-1:exon:18910;Parent=Msa0080510-mRNA-1
chr1_2 exon 58753948 58754052 58753948 ID=Msa0080510-mRNA-1:exon:18909;Parent=Msa0080510-mRNA-1
chr1_2 exon 58754142 58754272 58754142 ID=Msa0080510-mRNA-1:exon:18908;Parent=Msa0080510-mRNA-1
chr1_2 exon 58755029 58755145 58755029 ID=Msa0080510-mRNA-1:exon:18907;Parent=Msa0080510-mRNA-1
chr1_2 exon 58755218 58755234 58755218 ID=Msa0080510-mRNA-1:exon:18906;Parent=Msa0080510-mRNA-1
chr1_2 exon 58755565 58755736 58755565 ID=Msa0080510-mRNA-1:exon:18905;Parent=Msa0080510-mRNA-1
chr1_2 exon 58756102 58756141 58756102 ID=Msa0080510-mRNA-1:exon:18904;Parent=Msa0080510-mRNA-1
chr1_2 exon 58756651 58756737 58756651 ID=Msa0080510-mRNA-1:exon:18903;Parent=Msa0080510-mRNA-1
chr1_2 exon 58756822 58756887 58756822 ID=Msa0080510-mRNA-1:exon:18902;Parent=Msa0080510-mRNA-1
chr1_2 exon 58757045 58757143 58757045 ID=Msa0080510-mRNA-1:exon:18901;Parent=Msa0080510-mRNA-1
chr1_2 exon 58759598 58759720 58759598 ID=Msa0080510-mRNA-1:exon:18900;Parent=Msa0080510-mRNA-1
chr1_2 exon 58760047 58760112 58760047 ID=Msa0080510-mRNA-1:exon:18899;Parent=Msa0080510-mRNA-1
chr1_2 exon 58760225 58760416 58760225 ID=Msa0080510-mRNA-1:exon:18898;Parent=Msa0080510-mRNA-1
chr1_2 exon 58760691 58760756 58760691 ID=Msa0080510-mRNA-1:exon:18897;Parent=Msa0080510-mRNA-1
chr1_2 exon 58761776 58762349 58761776 ID=Msa0080510-mRNA-1:exon:18896;Parent=Msa0080510-mRNA-1
chr1_2 five_prime_UTR 58762073 58762349 58762073 ID=Msa0080510-mRNA-1:five_prime_utr;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58761776 58762072 58761776 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58760691 58760756 58760691 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58760225 58760416 58760225 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58760047 58760112 58760047 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58759598 58759720 58759598 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58757045 58757143 58757045 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58756822 58756887 58756822 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58756651 58756737 58756651 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58756102 58756141 58756102 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58755565 58755736 58755565 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58755218 58755234 58755218 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58755029 58755145 58755029 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58754142 58754272 58754142 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58753948 58754052 58753948 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58753633 58753746 58753633 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58753313 58753480 58753313 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58753076 58753177 58753076 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58752640 58752873 58752640 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58751302 58751817 58751302 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 CDS 58750808 58750999 58750808 ID=Msa0080510-mRNA-1:cds;Parent=Msa0080510-mRNA-1
chr1_2 three_prime_UTR 58750449 58750807 58750449 ID=Msa0080510-mRNA-1:three_prime_utr;Parent=Msa0080510-mRNA-1
Gene Sequence

>Msa0080510

ATGTTGAAGCTCATTTCATCCTCTTGCATCCACCGCTTAACCCCCGCCGCGGTTCCGGTTCTCCGACCGGCATCCGACTCCGCATCTCCGCTTCTTAGAGTTTTGAATTCTCTCAGCGGATTGAGTCGGAGTCATCGTTATTTGGGAGGGAGAGTATTTTTCTGTTCGGAGTCGGAATCCGGCGACGGACCCGATCATGTGGTTGATGCTGAAGCTAAAGCAGCTGAGGAAACTCCGTCAAAGGCTGCTTCTTCTGCTATTGTCTCCACTTATCCCAGACCTGAAGATTACCTCACTGTTTTGGCTTTGCCGTTGCAACATAGACCTCTTTTCCCAGGATTTTACATGCCAATTTTTGTTAAGGACCCCAAACTATTGGCAGCTTTACAGGAAAGTCGAGATCGACAAGCCCCTTATGCTGGTGCCTTCCTCCTTAAAGATGAGCCAGACTCTGATCCCAATGTAGTATCTAGCTCTGACACAGAAAAGAGTGTATATGATTTAAAAGGAAAAGAGTTGTTTAACCGTCTTCATGAAGTTGGGACTCTTGCCCAAATTTCAAGTATCCATGGGGATCAAGTGATCCTGATTGGTCATCGACGTCTGCGCATAACAGATATGGATAAAGCTTATAACAAAGATGATGACATCATAAAGGCCACATCTTTCGAGGTCATATCAACACTAAGGGACGTTCTTAAAACAAGTTCTCTTTGGAGAGATCATGTTGCGACTTACTCTAAGCATATAGGTGATTTTACATATCCAAGGCTAGCAGATTTTGGAGCTGCAATATCTGGGGCTAACAAATTGCAATGCCAACAAGTTCTTGAAGAGCTGGATGTGTATAAACGATTGAAACTTACACTCGAGTTGGTAAAGAAAGAGATGGAAATCAGTAAGATTCAGGAAACAATTGCGAAAGCAATTGAAGAAAAGATAAGTGGTGAGCAGCGCCGTTATTTGTTAAATGAGCAGCTTAAGGCCATAAAGAAGGAATTGGGACTGGAGACTGACGACAAGACAGCACTTACAGGTAAATTCAGGGAAAGGATTGAACCTAAGCGAGAAAAATGCCCACCTCATGTGTTACAAGTTATAGACGAGGAACTCGCAAAGCTACAGCTGTTGGAGGCTAGTTCTAGTGAATTCAGTGTTACCCGTAACTACTTGGACTGGTTGACTGCACTGCCTTGGGGTGAATACAGGCTCTTGGATGAACTAAAACTTTCATGTCACTCGGCACAAAAGATTCTTGATGAAGACCATTACGGATTAACTGATGTGAAGGAAAGAATATTGGAATTCATAGCTGTTGGGAAATTGAGAGGGACTTCACAAGGAAAAATTATCTGTCTTTCTGGTCCACCAGGCGTGGGAAAAACGAGTATTGGCCGTTCAATTGCACGGGCCTTGAACCGTAAGTTCTTCCGATTCTCTGTTGGAGGATTAGCTGATGTGGCTGAAATCAAGGGGCATCGTCGAACATATATAGGTGCTATGCCAGGAAAGATGGTACAATGCCTTAAGAATGTGGGAACAGCCAATCCTCTTGTATTGATTGATGAAATTGACAAATTGGGCAAAGGACATGCCGGTGATCCAGCAAGTGCTTTGCTAGAGCTCCTAGACCCCGAGCAGAATGCTAATTTTCTGGACCACTATCTTGATGTTCCCATCGATCTATCGAAGGTTCTTTTTGTTTGCACTGCAAATGTAGTGGAGATGATACCAAATCCCCTATTGGATAGGATGGAGGTTGTTACTATTGCTGGGTATATTGCTGATGAGAAAATGCACATTGCAAGAGATTATCTGGAGAAAACTACACGTGAAGCATGTGGAATAAAGCCGGAACAAGTGGAGGTGACTGATGCTGCTCTTCTTGCTCTAATAGAAAACTATTGCCGAGAATCAGGAGTCAGAAACCTTCAAAAGCACATAGAAAAAATTTACCGGAAGATAGCGCTACGACTTGTGAGGCACGTGGAAACAAATGATGATGCTATTGAACCAAAGAAAGCTGAAGAAGATTTTGATGAAACGGGTACTACTACCATTCAAAAAGGGAACCCCGTGTTGATAGAGAGTAGCAATCCTGAACATACCGATGAAAACTCTAAACTTGATGAGATGAACACAAATCCACCGGCAGATCAATCTCTCTGTGTTGACGATAAATCTACAGATATTGAGGTTACAAAAGAAAGAGAGGAAGATAAGGAAACTGAATCGAAGACTGTTGAGAAGGTATTAATTGATAAATCGAATTTAGATGATTTTGTTGGCAAGCCTGTCTTCCATGCAGAGCGCATCTTTGATCAAACACCTATTGGCGTTGTTATGGGACTTGCCTGGACTGCAATGGGCGGATCCACACTGTATATAGAGACTAAATCTGTTGAACAAGGGGACGGAAAAGGAGCATTGCATATCACCGGTCAATTAGGAGATGTAATGAAAGAAAGTGCTCAACTAGCTCACACAATTGCCAGAGATATACTACGGGAGAAAGAACCAGAAAACGCTTTCTTTGCCAATACAAAGTTTCACCTCCATGTTCCTGCAGGGGCTACACCAAAGGATGGACCAAGTGCTGGTTGCACGATGACCACTTCTATGTTGTCCCTTGCCTTGAAGAAGCCTGTGAAGAAGGATCTAGCAATGACTGGGGAAGTGACACTTACAGGGAAGATTCTTCCCATTGGCGGGGTTAAGGAGAAAACTATTGCTGCAAGAAGGAGTGAGGTTAAGACTATAATATTTCCTTCGGCAAATAAGAGAGATTTTGATGAGCTAGCACCTAATGTAAAAGAAGGTCTCGAAGTGCACTTTGTTGATGACTATATGCAGATCTTTGATTTGGCTTTTGGTGATGAGAAATCTCACAATGCAGAGAAGTAA
Protein sequence

>Msa0080510

MLKLISSSCIHRLTPAAVPVLRPASDSASPLLRVLNSLSGLSRSHRYLGGRVFFCSESESGDGPDHVVDAEAKAAEETPSKAASSAIVSTYPRPEDYLTVLALPLQHRPLFPGFYMPIFVKDPKLLAALQESRDRQAPYAGAFLLKDEPDSDPNVVSSSDTEKSVYDLKGKELFNRLHEVGTLAQISSIHGDQVILIGHRRLRITDMDKAYNKDDDIIKATSFEVISTLRDVLKTSSLWRDHVATYSKHIGDFTYPRLADFGAAISGANKLQCQQVLEELDVYKRLKLTLELVKKEMEISKIQETIAKAIEEKISGEQRRYLLNEQLKAIKKELGLETDDKTALTGKFRERIEPKREKCPPHVLQVIDEELAKLQLLEASSSEFSVTRNYLDWLTALPWGEYRLLDELKLSCHSAQKILDEDHYGLTDVKERILEFIAVGKLRGTSQGKIICLSGPPGVGKTSIGRSIARALNRKFFRFSVGGLADVAEIKGHRRTYIGAMPGKMVQCLKNVGTANPLVLIDEIDKLGKGHAGDPASALLELLDPEQNANFLDHYLDVPIDLSKVLFVCTANVVEMIPNPLLDRMEVVTIAGYIADEKMHIARDYLEKTTREACGIKPEQVEVTDAALLALIENYCRESGVRNLQKHIEKIYRKIALRLVRHVETNDDAIEPKKAEEDFDETGTTTIQKGNPVLIESSNPEHTDENSKLDEMNTNPPADQSLCVDDKSTDIEVTKEREEDKETESKTVEKVLIDKSNLDDFVGKPVFHAERIFDQTPIGVVMGLAWTAMGGSTLYIETKSVEQGDGKGALHITGQLGDVMKESAQLAHTIARDILREKEPENAFFANTKFHLHVPAGATPKDGPSAGCTMTTSMLSLALKKPVKKDLAMTGEVTLTGKILPIGGVKEKTIAARRSEVKTIIFPSANKRDFDELAPNVKEGLEVHFVDDYMQIFDLAFGDEKSHNAEK*