Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186430 | XP_013462258.1 | 87.714 | 350 | 4 | 2 | 1 | 311 | 1 | 350 | 0.0 | 614 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186430 | sp|Q6NPN9|DWA2_ARATH | 64.000 | 350 | 87 | 2 | 1 | 311 | 1 | 350 | 1.07e-162 | 459 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186430 | A0A072V4M1 | 87.714 | 350 | 4 | 2 | 1 | 311 | 1 | 350 | 0.0 | 614 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0186430 | Msa0385810 | 0.861312 | 1.120531e-63 | -8.615850e-47 |
| Msa0186430 | Msa0404260 | 0.860791 | 1.614466e-63 | -8.615850e-47 |
| Msa0186430 | Msa0523320 | 0.871689 | 5.643356e-67 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186430 | MtrunA17_Chr3g0143791 | 87.714 | 350 | 4 | 2 | 1 | 311 | 1 | 350 | 0.0 | 614 |
| Msa0186430 | MtrunA17_Chr4g0036951 | 26.131 | 199 | 139 | 5 | 102 | 296 | 183 | 377 | 3.79e-12 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186430 | AT1G20540.1 | 66.571 | 350 | 77 | 3 | 1 | 310 | 1 | 350 | 6.16e-172 | 480 |
| Msa0186430 | AT1G76260.1 | 64.000 | 350 | 87 | 2 | 1 | 311 | 1 | 350 | 1.09e-163 | 459 |
| Msa0186430 | AT2G16780.1 | 22.066 | 213 | 158 | 5 | 89 | 296 | 176 | 385 | 1.99e-11 | 64.7 |
Find 106 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGAATCATCTCTCCAGTTT+TGG | 0.158181 | 2_1:-1127181 | Msa0186430:CDS |
| GTGATTTCTATCATATTATT+TGG | 0.172174 | 2_1:-1125056 | Msa0186430:three_prime_UTR |
| GATTATGAAGACAGTATTTA+TGG | 0.189984 | 2_1:-1125619 | Msa0186430:intron |
| AATTGTTGATTTCTAATCTA+TGG | 0.193483 | 2_1:+1125126 | None:intergenic |
| ACAAGTATGTTGTTCTTTCT+AGG | 0.205190 | 2_1:+1126877 | None:intergenic |
| TCGTCTTGTAGTTTATAAAA+TGG | 0.213244 | 2_1:-1124955 | Msa0186430:three_prime_UTR |
| CTGAAACTTTCCATTCATTC+AGG | 0.222081 | 2_1:-1129490 | Msa0186430:five_prime_UTR |
| AGCTCTTGGATTGGAACTTT+TGG | 0.235539 | 2_1:+1126457 | None:intergenic |
| TTATAAAATGGTACATGAAA+TGG | 0.297176 | 2_1:-1124943 | Msa0186430:three_prime_UTR |
| TTCTTTAAGGCTAAGAGTTC+CGG | 0.300672 | 2_1:+1129246 | None:intergenic |
| TACTACCAAGCAGTATTCTT+TGG | 0.302862 | 2_1:-1128189 | Msa0186430:intron |
| TCTAATCTATGGATGATTCT+TGG | 0.307783 | 2_1:+1125137 | None:intergenic |
| TATTACAGGTACATCTTATT+CGG | 0.313591 | 2_1:-1129141 | Msa0186430:intron |
| TGAAGTCATTATGTAATCTA+TGG | 0.325468 | 2_1:-1125008 | Msa0186430:three_prime_UTR |
| TTATAAACTACAAGACGAAT+TGG | 0.348330 | 2_1:+1124960 | None:intergenic |
| TGGGTTTGATGTTGGTTAAC+AGG | 0.348792 | 2_1:-1125191 | Msa0186430:three_prime_UTR |
| AAACCTATGCTTGTGGAGTT+TGG | 0.356150 | 2_1:-1128122 | Msa0186430:CDS |
| GGTATGATGCACAAGTTATC+TGG | 0.357598 | 2_1:-1127248 | Msa0186430:CDS |
| CTTATTCGGCTTTCGGCAAA+TGG | 0.360330 | 2_1:-1129127 | Msa0186430:CDS |
| TATAAACTACAAGACGAATT+GGG | 0.365585 | 2_1:+1124961 | None:intergenic |
| ATGAGTCAGGGATACACATT+TGG | 0.372896 | 2_1:-1126492 | Msa0186430:CDS |
| GGTACATCTTATTCGGCTTT+CGG | 0.373404 | 2_1:-1129134 | Msa0186430:CDS |
| TCGTTCTCACATCCCAAAAC+TGG | 0.382275 | 2_1:+1127168 | None:intergenic |
| GTATCATCTGGTATCGGTTA+TGG | 0.388037 | 2_1:-1129426 | Msa0186430:CDS |
| GTTACAGCAGAGCATGAGTC+AGG | 0.388558 | 2_1:-1126505 | Msa0186430:CDS |
| TTTCACATCCCAATGAGATC+TGG | 0.396774 | 2_1:-1129078 | Msa0186430:CDS |
| GCATCATACCAGCTGAATCT+TGG | 0.397662 | 2_1:+1127261 | None:intergenic |
| TATAAAATGGTACATGAAAT+GGG | 0.399439 | 2_1:-1124942 | Msa0186430:three_prime_UTR |
| ATGGCACCGTAGGGTGTGTT+TGG | 0.407591 | 2_1:+1129540 | None:intergenic |
| TGTCAGTAATTTCCTGCCTC+TGG | 0.411250 | 2_1:-1125259 | Msa0186430:three_prime_UTR |
| GAGAAAATGCGCTGATCAAA+AGG | 0.414930 | 2_1:+1129040 | None:intergenic |
| CATCATACCAGCTGAATCTT+GGG | 0.436579 | 2_1:+1127262 | None:intergenic |
| GTTCCAATCCAAGAGCTTCC+AGG | 0.440106 | 2_1:-1126451 | Msa0186430:CDS |
| CGGTTATGGTCTCAAATATC+AGG | 0.443330 | 2_1:-1129412 | Msa0186430:intron |
| TGAAACTTTCCATTCATTCA+GGG | 0.444744 | 2_1:-1129489 | Msa0186430:five_prime_UTR |
| AGTATTCTTTGGTGGCCAAC+TGG | 0.446267 | 2_1:-1128178 | Msa0186430:CDS |
| AGGATCATTCCGTCATACTC+TGG | 0.448892 | 2_1:+1126134 | None:intergenic |
| ATTTGGATATTTCAGAGTGC+TGG | 0.449472 | 2_1:-1125831 | Msa0186430:intron |
| GGTAATCAACACTGCGGACA+TGG | 0.453337 | 2_1:+1126902 | None:intergenic |
| AGCAGAGTCATCTGTCCGTT+TGG | 0.453401 | 2_1:-1125668 | Msa0186430:CDS |
| AACAAGGTCCCAGATCTCAT+TGG | 0.464387 | 2_1:+1129069 | None:intergenic |
| TTTCAGTTGGTAACTCATCA+TGG | 0.473525 | 2_1:+1125769 | None:intergenic |
| GTTGTTGGTGGGTTTGATGT+TGG | 0.478991 | 2_1:-1125199 | Msa0186430:three_prime_UTR |
| ACAATGCAAGCTGTATCATC+TGG | 0.479446 | 2_1:-1129438 | Msa0186430:CDS |
| ACAAGGTCCCAGATCTCATT+GGG | 0.486004 | 2_1:+1129070 | None:intergenic |
| GTGTGTGGCCTGGAAGCTCT+TGG | 0.488370 | 2_1:+1126443 | None:intergenic |
| TGGCCTGGAAGCTCTTGGAT+TGG | 0.492026 | 2_1:+1126448 | None:intergenic |
| CAAGTTATCTGGAGGGGCAT+GGG | 0.493455 | 2_1:-1127237 | Msa0186430:CDS |
| ATACACAACAAGATGACAAA+TGG | 0.494740 | 2_1:+1125281 | None:intergenic |
| TTCACATCCCAATGAGATCT+GGG | 0.498782 | 2_1:-1129077 | Msa0186430:CDS |
| TTGAACTATCCCTGAATGAA+TGG | 0.500065 | 2_1:+1129480 | None:intergenic |
| GTATGTTGTTCTTTCTAGGA+TGG | 0.511077 | 2_1:+1126881 | None:intergenic |
| TGAGTCAGGGATACACATTT+GGG | 0.511412 | 2_1:-1126491 | Msa0186430:CDS |
| CAATCCCTCACAGAAAAGTT+CGG | 0.512341 | 2_1:+1129102 | None:intergenic |
| TACCAAGCAGTATTCTTTGG+TGG | 0.512861 | 2_1:-1128186 | Msa0186430:intron |
| AGAGTATGACGGAATGATCC+TGG | 0.518026 | 2_1:-1126132 | Msa0186430:intron |
| TAAGAATATGACCTTTCAGT+TGG | 0.519260 | 2_1:+1125756 | None:intergenic |
| CATCTTTGTCCTATGACGGA+AGG | 0.525463 | 2_1:-1125471 | Msa0186430:CDS |
| TATCTCAAGACTCCAGAGGC+AGG | 0.525960 | 2_1:+1125247 | None:intergenic |
| AACGGACAGATGACTCTGCT+TGG | 0.526905 | 2_1:+1125671 | None:intergenic |
| AACAGGATTAGATGTTACAT+TGG | 0.530626 | 2_1:-1125174 | Msa0186430:three_prime_UTR |
| GACTCAACATAGTTGTTGGT+GGG | 0.532509 | 2_1:-1125210 | Msa0186430:three_prime_UTR |
| TTCTTTGGTGGCCAACTGGA+AGG | 0.536489 | 2_1:-1128174 | Msa0186430:CDS |
| ACAAGTTATCTGGAGGGGCA+TGG | 0.538022 | 2_1:-1127238 | Msa0186430:CDS |
| TAGCCTTAAAGAAGAAAATG+AGG | 0.544050 | 2_1:-1129236 | Msa0186430:intron |
| CATCCAAACTCCACAAGCAT+AGG | 0.548901 | 2_1:+1128119 | None:intergenic |
| AATTTATCATGCCTTCCAGT+TGG | 0.550107 | 2_1:+1128163 | None:intergenic |
| GTACAATCCCAAGATTCAGC+TGG | 0.553955 | 2_1:-1127269 | Msa0186430:CDS |
| AGGTACCAATGTGTGTGGCC+TGG | 0.555057 | 2_1:+1126433 | None:intergenic |
| TTTGCATCTTTGTCCTATGA+CGG | 0.559496 | 2_1:-1125475 | Msa0186430:CDS |
| GATATTTCAGAGTGCTGGAA+CGG | 0.562762 | 2_1:-1125826 | Msa0186430:intron |
| ACTTCATGAATTACATAACA+TGG | 0.563467 | 2_1:+1125025 | None:intergenic |
| ATAAACTACAAGACGAATTG+GGG | 0.564341 | 2_1:+1124962 | None:intergenic |
| GGATCATTCCGTCATACTCT+GGG | 0.565346 | 2_1:+1126135 | None:intergenic |
| AGACTCAACATAGTTGTTGG+TGG | 0.572934 | 2_1:-1125211 | Msa0186430:three_prime_UTR |
| CATGGAGTTCTCGTCAACCA+TGG | 0.573556 | 2_1:-1125501 | Msa0186430:CDS |
| TGAAGACTCAACATAGTTGT+TGG | 0.580201 | 2_1:-1125214 | Msa0186430:three_prime_UTR |
| CAAGCTGTATCATCTGGTAT+CGG | 0.580366 | 2_1:-1129432 | Msa0186430:CDS |
| AAAGTTTCAGATACACTGTC+CGG | 0.590541 | 2_1:+1129503 | None:intergenic |
| ATCTTTGTCCTATGACGGAA+GGG | 0.591572 | 2_1:-1125470 | Msa0186430:intron |
| CTATGGATGATTCTTGGTCA+AGG | 0.595963 | 2_1:+1125143 | None:intergenic |
| GTAATCAACACTGCGGACAT+GGG | 0.601319 | 2_1:+1126903 | None:intergenic |
| AGCTTCCAGGCCACACACAT+TGG | 0.602394 | 2_1:-1126438 | Msa0186430:intron |
| TAAGCAGTGGATCAACCAAA+CGG | 0.612697 | 2_1:+1125653 | None:intergenic |
| TTGATGTTGAGATTCACACT+TGG | 0.621050 | 2_1:+1124910 | None:intergenic |
| GCTACAGAATTCATGTCATG+TGG | 0.621870 | 2_1:+1127212 | None:intergenic |
| ATGATGCACAAGTTATCTGG+AGG | 0.622737 | 2_1:-1127245 | Msa0186430:CDS |
| ATGATGAGTTACCAACTGAA+AGG | 0.627881 | 2_1:-1125767 | Msa0186430:intron |
| CGGATTCGACTGTCAACTTG+TGG | 0.630246 | 2_1:-1125806 | Msa0186430:CDS |
| TTACAGCAGAGCATGAGTCA+GGG | 0.635696 | 2_1:-1126504 | Msa0186430:CDS |
| TCACTGTATGTATTAAGCAG+TGG | 0.636494 | 2_1:+1125640 | None:intergenic |
| TTCGACTGTCAACTTGTGGT+CGG | 0.636828 | 2_1:-1125802 | Msa0186430:CDS |
| TGTTTCCAAGAAAACTGCAC+AGG | 0.638150 | 2_1:-1128098 | Msa0186430:intron |
| ATGATGAAAACCTATGCTTG+TGG | 0.640743 | 2_1:-1128129 | Msa0186430:CDS |
| TGATGCACAAGTTATCTGGA+GGG | 0.643534 | 2_1:-1127244 | Msa0186430:CDS |
| GATCAAAAGGACAAGAAACA+AGG | 0.643986 | 2_1:+1129053 | None:intergenic |
| AAGTGTAACCCAGAGTATGA+CGG | 0.647448 | 2_1:-1126143 | Msa0186430:CDS |
| TCATACAGTGGGAAAAGAAG+CGG | 0.653495 | 2_1:+1124879 | None:intergenic |
| GATGCACAAGTTATCTGGAG+GGG | 0.654578 | 2_1:-1127243 | Msa0186430:CDS |
| GGAGTCTTGAGATAAACAGA+TGG | 0.657500 | 2_1:-1125238 | Msa0186430:three_prime_UTR |
| GATCACACAAGTTTCCTCGC+CGG | 0.658007 | 2_1:-1129265 | Msa0186430:CDS |
| TAACTCATCATGGTTTATCG+AGG | 0.659409 | 2_1:+1125779 | None:intergenic |
| TGTTTATCTCAAGACTCCAG+AGG | 0.679790 | 2_1:+1125243 | None:intergenic |
| TAAGGCTAAGAGTTCCGGCG+AGG | 0.697714 | 2_1:+1129251 | None:intergenic |
| ATGACAGGTACCAATGTGTG+TGG | 0.738267 | 2_1:+1126428 | None:intergenic |
| TAGGATGGTAATCAACACTG+CGG | 0.802826 | 2_1:+1126896 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAATTGGATTAATTAA+TGG | + | chr2_1:1125074-1125093 | None:intergenic | 10.0% |
| !!! | AATACATTAATTTTTATTGA+TGG | - | chr2_1:1127788-1127807 | Msa0186430:intron | 10.0% |
| !!! | ATACATTAATTTTTATTGAT+GGG | - | chr2_1:1127789-1127808 | Msa0186430:intron | 10.0% |
| !! | TTTAATGAAATAAAAAAAGT+AGG | + | chr2_1:1128168-1128187 | None:intergenic | 10.0% |
| !! | TTAACAAAAAAAAAACTACT+TGG | + | chr2_1:1127432-1127451 | None:intergenic | 15.0% |
| !! | ATATTATAAAACCAAATAGA+AGG | + | chr2_1:1127625-1127644 | None:intergenic | 15.0% |
| !! | AAAGAAAATAAACTATTTGA+TGG | - | chr2_1:1128196-1128215 | Msa0186430:intron | 15.0% |
| !! | AAATTATATGTCATTGAATT+TGG | - | chr2_1:1128581-1128600 | Msa0186430:intron | 15.0% |
| !!! | TCAATTTTTATTCATTTTAC+AGG | - | chr2_1:1128900-1128919 | Msa0186430:intron | 15.0% |
| !!! | CAATTTTTATTCATTTTACA+GGG | - | chr2_1:1128901-1128920 | Msa0186430:intron | 15.0% |
| !! | TTATTTAGATCAGTTTATTT+GGG | + | chr2_1:1129040-1129059 | None:intergenic | 15.0% |
| !!! | ATTAGAAATCAACAATTTTT+TGG | - | chr2_1:1129309-1129328 | Msa0186430:intron | 15.0% |
| !! | TTAAAGGGAATGATAATAAT+TGG | + | chr2_1:1125086-1125105 | None:intergenic | 20.0% |
| !!! | TTTTTGCTTATAATAGTGAT+CGG | + | chr2_1:1125840-1125859 | None:intergenic | 20.0% |
| !! | CATTTAATAAATGATGTATG+TGG | + | chr2_1:1125913-1125932 | None:intergenic | 20.0% |
| !!! | TAAGCAAAATTTGACTTTTT+AGG | + | chr2_1:1125938-1125957 | None:intergenic | 20.0% |
| !! | ATAACAAACATATACTAAAG+AGG | + | chr2_1:1126180-1126199 | None:intergenic | 20.0% |
| !!! | GTTTGTTATTCACATTTATA+CGG | - | chr2_1:1126191-1126210 | Msa0186430:intron | 20.0% |
| !!! | CTGATATGTATTTTCTTTTT+TGG | + | chr2_1:1126462-1126481 | None:intergenic | 20.0% |
| !!! | TTTAAAATACAATAGTGAAG+AGG | - | chr2_1:1126655-1126674 | Msa0186430:intron | 20.0% |
| !! | TGTTCATAAATATCAATTAC+AGG | + | chr2_1:1126696-1126715 | None:intergenic | 20.0% |
| !!! | TCAAACAACATTTTAAGATT+CGG | + | chr2_1:1126741-1126760 | None:intergenic | 20.0% |
| !! | CAATGAGTAATTTACTTAAA+TGG | + | chr2_1:1127356-1127375 | None:intergenic | 20.0% |
| !! | AATTGGATTATTTAAATCAC+AGG | - | chr2_1:1127481-1127500 | Msa0186430:intron | 20.0% |
| !! | ATGAAATAAAAAAAGTAGGT+AGG | + | chr2_1:1128164-1128183 | None:intergenic | 20.0% |
| !! | ATATCACACACAAATAAATA+CGG | - | chr2_1:1128396-1128415 | Msa0186430:intron | 20.0% |
| !! | TATTTAGATCAGTTTATTTG+GGG | + | chr2_1:1129039-1129058 | None:intergenic | 20.0% |
| !! | GTTATTTAGATCAGTTTATT+TGG | + | chr2_1:1129041-1129060 | None:intergenic | 20.0% |
| !!! | AATTGTTGATTTCTAATCTA+TGG | + | chr2_1:1129306-1129325 | None:intergenic | 20.0% |
| !! | GTGATTTCTATCATATTATT+TGG | - | chr2_1:1129373-1129392 | Msa0186430:intron | 20.0% |
| !! | TTATAAAATGGTACATGAAA+TGG | - | chr2_1:1129486-1129505 | Msa0186430:five_prime_UTR | 20.0% |
| !! | TATAAAATGGTACATGAAAT+GGG | - | chr2_1:1129487-1129506 | Msa0186430:five_prime_UTR | 20.0% |
| ! | CAATCAAAACAGTGATTAAA+GGG | + | chr2_1:1125101-1125120 | None:intergenic | 25.0% |
| ! | ACAATCAAAACAGTGATTAA+AGG | + | chr2_1:1125102-1125121 | None:intergenic | 25.0% |
| ! | TATTACAGGTACATCTTATT+CGG | - | chr2_1:1125288-1125307 | Msa0186430:three_prime_UTR | 25.0% |
| ! | TTTCATACCATTAGAATAGA+CGG | + | chr2_1:1125417-1125436 | None:intergenic | 25.0% |
| !!! | TTACCTTTTGTTGTTGATAA+AGG | - | chr2_1:1125657-1125676 | Msa0186430:CDS | 25.0% |
| ! | CATTCAATAAATGATGTATG+TGG | - | chr2_1:1125875-1125894 | Msa0186430:intron | 25.0% |
| !! | ATTTTGCTTATAATAGTGAC+CGG | - | chr2_1:1125948-1125967 | Msa0186430:intron | 25.0% |
| !!! | ATAACATACATGTGTTTTTG+TGG | + | chr2_1:1126408-1126427 | None:intergenic | 25.0% |
| !! | TTATTATTCAAGTTACCGTT+AGG | - | chr2_1:1126499-1126518 | Msa0186430:CDS | 25.0% |
| !! | TAAAATGTTGTTTGAATGAG+AGG | - | chr2_1:1126746-1126765 | Msa0186430:intron | 25.0% |
| ! | ATGCAAATTAAACTCTTACA+GGG | + | chr2_1:1126917-1126936 | None:intergenic | 25.0% |
| ! | TATGCAAATTAAACTCTTAC+AGG | + | chr2_1:1126918-1126937 | None:intergenic | 25.0% |
| !!! | TGTAAGAGTTTAATTTGCAT+AGG | - | chr2_1:1126917-1126936 | Msa0186430:CDS | 25.0% |
| !! | TCCTAAATTCATTCTTTTAC+TGG | - | chr2_1:1127294-1127313 | Msa0186430:intron | 25.0% |
| ! | ACCAGTAAAAGAATGAATTT+AGG | + | chr2_1:1127298-1127317 | None:intergenic | 25.0% |
| ! | GAGTAATTTACTTAAATGGA+AGG | + | chr2_1:1127352-1127371 | None:intergenic | 25.0% |
| !! | AAAAAAACTACTTGGTTTGA+GGG | + | chr2_1:1127424-1127443 | None:intergenic | 25.0% |
| !! | AAAAAAAACTACTTGGTTTG+AGG | + | chr2_1:1127425-1127444 | None:intergenic | 25.0% |
| !! | AAACCAAATAGAAGGTATAA+AGG | + | chr2_1:1127617-1127636 | None:intergenic | 25.0% |
| ! | ATTCACCCAATGATATAATA+TGG | - | chr2_1:1127684-1127703 | Msa0186430:intron | 25.0% |
| ! | CCAATCCATATTATATCATT+GGG | + | chr2_1:1127692-1127711 | None:intergenic | 25.0% |
| !!! | AATTAATGTATTTTGACGCT+AGG | + | chr2_1:1127780-1127799 | None:intergenic | 25.0% |
| !! | TGAATTGCTATGTTATTTAC+AGG | - | chr2_1:1127902-1127921 | Msa0186430:intron | 25.0% |
| ! | TAGGTTATTTGTGCATTAAA+AGG | + | chr2_1:1128145-1128164 | None:intergenic | 25.0% |
| !!! | TAAAAAAAAGTTTGTTGCAG+AGG | + | chr2_1:1128430-1128449 | None:intergenic | 25.0% |
| !!! | TCTGCAACAAACTTTTTTTT+AGG | - | chr2_1:1128429-1128448 | Msa0186430:intron | 25.0% |
| !!! | CTGCAACAAACTTTTTTTTA+GGG | - | chr2_1:1128430-1128449 | Msa0186430:intron | 25.0% |
| ! | GATTATGAAGACAGTATTTA+TGG | - | chr2_1:1128810-1128829 | Msa0186430:intron | 25.0% |
| ! | AATCTTATTGCTTACATGTT+TGG | - | chr2_1:1128996-1129015 | Msa0186430:intron | 25.0% |
| ! | ATCTTATTGCTTACATGTTT+GGG | - | chr2_1:1128997-1129016 | Msa0186430:intron | 25.0% |
| ! | ATTTAGATCAGTTTATTTGG+GGG | + | chr2_1:1129038-1129057 | None:intergenic | 25.0% |
| !!! | TGATGTTGAACATCATTTTT+TGG | + | chr2_1:1129114-1129133 | None:intergenic | 25.0% |
| ! | ACTTCATGAATTACATAACA+TGG | + | chr2_1:1129407-1129426 | None:intergenic | 25.0% |
| ! | TGAAGTCATTATGTAATCTA+TGG | - | chr2_1:1129421-1129440 | Msa0186430:CDS | 25.0% |
| ! | TATAAACTACAAGACGAATT+GGG | + | chr2_1:1129471-1129490 | None:intergenic | 25.0% |
| ! | TTATAAACTACAAGACGAAT+TGG | + | chr2_1:1129472-1129491 | None:intergenic | 25.0% |
| ! | TCGTCTTGTAGTTTATAAAA+TGG | - | chr2_1:1129474-1129493 | Msa0186430:five_prime_UTR | 25.0% |
| TGAAACTTTCCATTCATTCA+GGG | - | chr2_1:1124940-1124959 | Msa0186430:three_prime_UTR | 30.0% | |
| GAGTGGTAATAATGAGAATT+GGG | + | chr2_1:1125050-1125069 | None:intergenic | 30.0% | |
| AGAGTGGTAATAATGAGAAT+TGG | + | chr2_1:1125051-1125070 | None:intergenic | 30.0% | |
| TTGGATTAATTAATGGAGAG+TGG | + | chr2_1:1125067-1125086 | None:intergenic | 30.0% | |
| ! | TAGCCTTAAAGAAGAAAATG+AGG | - | chr2_1:1125193-1125212 | Msa0186430:three_prime_UTR | 30.0% |
| ! | GTACCTCATTTTCTTCTTTA+AGG | + | chr2_1:1125199-1125218 | None:intergenic | 30.0% |
| AAATCCGATGAAAACTGAAT+TGG | + | chr2_1:1125237-1125256 | None:intergenic | 30.0% | |
| TCGTTACATCACATTATTAC+AGG | - | chr2_1:1125274-1125293 | Msa0186430:three_prime_UTR | 30.0% | |
| CAATAAGCACAAACTATCTA+TGG | + | chr2_1:1125464-1125483 | None:intergenic | 30.0% | |
| TCACCTTTATCAACAACAAA+AGG | + | chr2_1:1125663-1125682 | None:intergenic | 30.0% | |
| GATGTAATTCTCTCTAATTG+AGG | + | chr2_1:1125741-1125760 | None:intergenic | 30.0% | |
| AAACGAAGAAATCTGCAAAA+GGG | + | chr2_1:1125808-1125827 | None:intergenic | 30.0% | |
| TAAACGAAGAAATCTGCAAA+AGG | + | chr2_1:1125809-1125828 | None:intergenic | 30.0% | |
| ATTTCTCTATTTCACACTGT+TGG | - | chr2_1:1126102-1126121 | Msa0186430:intron | 30.0% | |
| TGGTTTATTATGACACCTAA+CGG | + | chr2_1:1126517-1126536 | None:intergenic | 30.0% | |
| !! | GTAGGAAAACATGTTGATTT+GGG | - | chr2_1:1126561-1126580 | Msa0186430:intron | 30.0% |
| CAAGAACAGATAATCTTTCA+TGG | + | chr2_1:1126596-1126615 | None:intergenic | 30.0% | |
| GGATTACATATTGTCCATAA+GGG | - | chr2_1:1126878-1126897 | Msa0186430:intron | 30.0% | |
| GAACAAAATTAGATCCCTTA+TGG | + | chr2_1:1126895-1126914 | None:intergenic | 30.0% | |
| GTATAAAACTTTGTGGTGTT+TGG | + | chr2_1:1126983-1127002 | None:intergenic | 30.0% | |
| AAACCTCGTATAAAACTTTG+TGG | + | chr2_1:1126990-1127009 | None:intergenic | 30.0% | |
| ! | GTTTTATACGAGGTTTCATT+AGG | - | chr2_1:1126994-1127013 | Msa0186430:intron | 30.0% |
| !!! | GTCACTGCTTTTTTAAAATC+TGG | - | chr2_1:1127068-1127087 | Msa0186430:intron | 30.0% |
| !!! | ACTGCTTTTTTAAAATCTGG+TGG | - | chr2_1:1127071-1127090 | Msa0186430:intron | 30.0% |
| !! | TGTTGTTTGTATGTTTTGAG+AGG | + | chr2_1:1127131-1127150 | None:intergenic | 30.0% |
| CATACAAACAACAAAAACCT+AGG | - | chr2_1:1127138-1127157 | Msa0186430:intron | 30.0% | |
| ! | TTTTGTTAATCAGTACCTGT+TGG | - | chr2_1:1127443-1127462 | Msa0186430:intron | 30.0% |
| GGAATTTCATGTCTACTAAT+TGG | - | chr2_1:1127464-1127483 | Msa0186430:intron | 30.0% | |
| ACAAGTATGTTGTTCTTTCT+AGG | + | chr2_1:1127555-1127574 | None:intergenic | 30.0% | |
| ATGCCTTTATACCTTCTATT+TGG | - | chr2_1:1127611-1127630 | Msa0186430:intron | 30.0% | |
| TATAATATCTGTGTCTGAGA+TGG | - | chr2_1:1127637-1127656 | Msa0186430:intron | 30.0% | |
| CCCAATGATATAATATGGAT+TGG | - | chr2_1:1127689-1127708 | Msa0186430:intron | 30.0% | |
| GCCAATCCATATTATATCAT+TGG | + | chr2_1:1127693-1127712 | None:intergenic | 30.0% | |
| !! | GCTTTAAAACTATACATGAC+AGG | + | chr2_1:1128019-1128038 | None:intergenic | 30.0% |
| AAGAGAAAAGAAAGTAGAAC+AGG | - | chr2_1:1128075-1128094 | Msa0186430:intron | 30.0% | |
| TATGTATTACTTGTATTGCC+AGG | - | chr2_1:1128251-1128270 | Msa0186430:intron | 30.0% | |
| ACACAAATAAATACGGACAA+GGG | - | chr2_1:1128403-1128422 | Msa0186430:intron | 30.0% | |
| TAAGAATATGACCTTTCAGT+TGG | + | chr2_1:1128676-1128695 | None:intergenic | 30.0% | |
| GACATAGTCTATAAAGATCA+TGG | + | chr2_1:1128877-1128896 | None:intergenic | 30.0% | |
| !! | AACCACTTTACTTTTCAAAC+AGG | - | chr2_1:1129058-1129077 | Msa0186430:CDS | 30.0% |
| !!! | CATCATTTTTTGGAGATGAA+AGG | + | chr2_1:1129104-1129123 | None:intergenic | 30.0% |
| ATACACAACAAGATGACAAA+TGG | + | chr2_1:1129151-1129170 | None:intergenic | 30.0% | |
| AACAGGATTAGATGTTACAT+TGG | - | chr2_1:1129255-1129274 | Msa0186430:CDS | 30.0% | |
| TCTAATCTATGGATGATTCT+TGG | + | chr2_1:1129295-1129314 | None:intergenic | 30.0% | |
| ATAAACTACAAGACGAATTG+GGG | + | chr2_1:1129470-1129489 | None:intergenic | 30.0% | |
| AAAGTTTCAGATACACTGTC+CGG | + | chr2_1:1124929-1124948 | None:intergenic | 35.0% | |
| CTGAAACTTTCCATTCATTC+AGG | - | chr2_1:1124939-1124958 | Msa0186430:three_prime_UTR | 35.0% | |
| TTGAACTATCCCTGAATGAA+TGG | + | chr2_1:1124952-1124971 | None:intergenic | 35.0% | |
| !!! | CTGTTTTGATTGTCTTGTCT+AGG | - | chr2_1:1125109-1125128 | Msa0186430:three_prime_UTR | 35.0% |
| !! | TTCTTTAAGGCTAAGAGTTC+CGG | + | chr2_1:1125186-1125205 | None:intergenic | 35.0% |
| ! | TGCTCCAATTCAGTTTTCAT+CGG | - | chr2_1:1125230-1125249 | Msa0186430:three_prime_UTR | 35.0% |
| GATCAAAAGGACAAGAAACA+AGG | + | chr2_1:1125379-1125398 | None:intergenic | 35.0% | |
| TTCTCAACCGTCTATTCTAA+TGG | - | chr2_1:1125407-1125426 | Msa0186430:intron | 35.0% | |
| TTACTGTTTGAGAGAGCTTA+TGG | - | chr2_1:1125498-1125517 | Msa0186430:CDS | 35.0% | |
| TACTGTTTGAGAGAGCTTAT+GGG | - | chr2_1:1125499-1125518 | Msa0186430:CDS | 35.0% | |
| AAGCTATCATAGACAGCTTA+TGG | + | chr2_1:1125542-1125561 | None:intergenic | 35.0% | |
| ! | GTTGATAAAGGTGAAACCTA+TGG | - | chr2_1:1125669-1125688 | Msa0186430:CDS | 35.0% |
| TTTAACTCGCCATATAACTC+CGG | + | chr2_1:1125714-1125733 | None:intergenic | 35.0% | |
| TACTCACCATTTGATCTTAC+CGG | + | chr2_1:1125778-1125797 | None:intergenic | 35.0% | |
| TGCTTATAATAGTGATCGGA+GGG | + | chr2_1:1125836-1125855 | None:intergenic | 35.0% | |
| TTGCTTATAATAGTGATCGG+AGG | + | chr2_1:1125837-1125856 | None:intergenic | 35.0% | |
| TACTACCAAGCAGTATTCTT+TGG | - | chr2_1:1126240-1126259 | Msa0186430:intron | 35.0% | |
| AATTTATCATGCCTTCCAGT+TGG | + | chr2_1:1126269-1126288 | None:intergenic | 35.0% | |
| ATGATGAAAACCTATGCTTG+TGG | - | chr2_1:1126300-1126319 | Msa0186430:intron | 35.0% | |
| ! | GGTAGGAAAACATGTTGATT+TGG | - | chr2_1:1126560-1126579 | Msa0186430:intron | 35.0% |
| !! | AAAACATGTTGATTTGGGAG+AGG | - | chr2_1:1126566-1126585 | Msa0186430:intron | 35.0% |
| GAGTCTAGAGAGAAACTATT+TGG | + | chr2_1:1126629-1126648 | None:intergenic | 35.0% | |
| ATAGTTTCTCTCTAGACTCT+AGG | - | chr2_1:1126630-1126649 | Msa0186430:intron | 35.0% | |
| !!! | AGAGGCATTTTAGAAAACGA+AGG | - | chr2_1:1126764-1126783 | Msa0186430:intron | 35.0% |
| !! | GAGGCATTTTAGAAAACGAA+GGG | - | chr2_1:1126765-1126784 | Msa0186430:intron | 35.0% |
| ! | CTGTTGATGAGTGAAGATAT+TGG | - | chr2_1:1126788-1126807 | Msa0186430:intron | 35.0% |
| AGTTGTTTGGAGAAATCCAT+TGG | + | chr2_1:1126814-1126833 | None:intergenic | 35.0% | |
| GTGGCTTATATCATAAACTG+TGG | + | chr2_1:1126851-1126870 | None:intergenic | 35.0% | |
| ATGATATAAGCCACTGAGAA+CGG | - | chr2_1:1126857-1126876 | Msa0186430:intron | 35.0% | |
| AATATGTAATCCGTTCTCAG+TGG | + | chr2_1:1126870-1126889 | None:intergenic | 35.0% | |
| CGGATTACATATTGTCCATA+AGG | - | chr2_1:1126877-1126896 | Msa0186430:intron | 35.0% | |
| !! | TGTTTGGCTTGCATTAAGAA+TGG | + | chr2_1:1126967-1126986 | None:intergenic | 35.0% |
| !! | ACACCACAAAGTTTTATACG+AGG | - | chr2_1:1126984-1127003 | Msa0186430:intron | 35.0% |
| TTTCATTAGGACCTAAGATC+TGG | - | chr2_1:1127007-1127026 | Msa0186430:intron | 35.0% | |
| TTCATTAGGACCTAAGATCT+GGG | - | chr2_1:1127008-1127027 | Msa0186430:intron | 35.0% | |
| AGCAGTGACTATCAACATAA+AGG | + | chr2_1:1127057-1127076 | None:intergenic | 35.0% | |
| !!! | GTTTGTATGTTTTGAGAGGA+GGG | + | chr2_1:1127127-1127146 | None:intergenic | 35.0% |
| !!! | TGTTTGTATGTTTTGAGAGG+AGG | + | chr2_1:1127128-1127147 | None:intergenic | 35.0% |
| ! | TGAATCATCTCTCCAGTTTT+GGG | - | chr2_1:1127249-1127268 | Msa0186430:CDS | 35.0% |
| !! | ACTCATTGCATTTCAAGTTC+AGG | - | chr2_1:1127368-1127387 | Msa0186430:intron | 35.0% |
| AGTAGACATGAAATTCCAAC+AGG | + | chr2_1:1127461-1127480 | None:intergenic | 35.0% | |
| ! | GTATGTTGTTCTTTCTAGGA+TGG | + | chr2_1:1127551-1127570 | None:intergenic | 35.0% |
| !! | TTCCCATTTGTTGTTACGAT+CGG | - | chr2_1:1128119-1128138 | Msa0186430:CDS | 35.0% |
| CACACAAATAAATACGGACA+AGG | - | chr2_1:1128402-1128421 | Msa0186430:intron | 35.0% | |
| TTTATCTCAATCCTGAGCAA+GGG | + | chr2_1:1128464-1128483 | None:intergenic | 35.0% | |
| ATTTGGATATTTCAGAGTGC+TGG | - | chr2_1:1128598-1128617 | Msa0186430:intron | 35.0% | |
| TAACTCATCATGGTTTATCG+AGG | + | chr2_1:1128653-1128672 | None:intergenic | 35.0% | |
| !! | TTTCAGTTGGTAACTCATCA+TGG | + | chr2_1:1128663-1128682 | None:intergenic | 35.0% |
| ATGATGAGTTACCAACTGAA+AGG | - | chr2_1:1128662-1128681 | Msa0186430:intron | 35.0% | |
| TTCATCTTTGCTCGCATATT+TGG | - | chr2_1:1128732-1128751 | Msa0186430:intron | 35.0% | |
| TCACTGTATGTATTAAGCAG+TGG | + | chr2_1:1128792-1128811 | None:intergenic | 35.0% | |
| GTATTTATGGTAAGAGCTTC+TGG | - | chr2_1:1128823-1128842 | Msa0186430:intron | 35.0% | |
| ! | TTCATTTTACAGGGCTTACA+TGG | - | chr2_1:1128910-1128929 | Msa0186430:intron | 35.0% |
| GACAAAGATGCAAAAATCCA+TGG | + | chr2_1:1128948-1128967 | None:intergenic | 35.0% | |
| TTTGCATCTTTGTCCTATGA+CGG | - | chr2_1:1128954-1128973 | Msa0186430:intron | 35.0% | |
| CACCTGTTTGAAAAGTAAAG+TGG | + | chr2_1:1129063-1129082 | None:intergenic | 35.0% | |
| !! | CACTTTACTTTTCAAACAGG+TGG | - | chr2_1:1129061-1129080 | Msa0186430:CDS | 35.0% |
| TGAAGACTCAACATAGTTGT+TGG | - | chr2_1:1129215-1129234 | Msa0186430:intron | 35.0% | |
| TTGATGTTGAGATTCACACT+TGG | + | chr2_1:1129522-1129541 | None:intergenic | 35.0% | |
| !!! | GCCATTTTTGGGTTTAACTC+CGG | - | chr2_1:1124907-1124926 | Msa0186430:three_prime_UTR | 40.0% |
| TCCGGAGTTAAACCCAAAAA+TGG | + | chr2_1:1124911-1124930 | None:intergenic | 40.0% | |
| ACAATGCAAGCTGTATCATC+TGG | - | chr2_1:1124991-1125010 | Msa0186430:three_prime_UTR | 40.0% | |
| CAAGCTGTATCATCTGGTAT+CGG | - | chr2_1:1124997-1125016 | Msa0186430:three_prime_UTR | 40.0% | |
| !! | GTATCATCTGGTATCGGTTA+TGG | - | chr2_1:1125003-1125022 | Msa0186430:three_prime_UTR | 40.0% |
| CGGTTATGGTCTCAAATATC+AGG | - | chr2_1:1125017-1125036 | Msa0186430:three_prime_UTR | 40.0% | |
| GGTACATCTTATTCGGCTTT+CGG | - | chr2_1:1125295-1125314 | Msa0186430:three_prime_UTR | 40.0% | |
| CAATCCCTCACAGAAAAGTT+CGG | + | chr2_1:1125330-1125349 | None:intergenic | 40.0% | |
| TTTCACATCCCAATGAGATC+TGG | - | chr2_1:1125351-1125370 | Msa0186430:CDS | 40.0% | |
| TTCACATCCCAATGAGATCT+GGG | - | chr2_1:1125352-1125371 | Msa0186430:CDS | 40.0% | |
| ! | GAGAAAATGCGCTGATCAAA+AGG | + | chr2_1:1125392-1125411 | None:intergenic | 40.0% |
| AAACCTATGGAGCAGCAATA+TGG | - | chr2_1:1125682-1125701 | Msa0186430:intron | 40.0% | |
| ACATCTCTCGAAACTCAATC+CGG | - | chr2_1:1125756-1125775 | Msa0186430:intron | 40.0% | |
| CTCAATCCGGTAAGATCAAA+TGG | - | chr2_1:1125769-1125788 | Msa0186430:CDS | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr2_1:1125951-1125970 | Msa0186430:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr2_1:1125952-1125971 | Msa0186430:intron | 40.0% | |
| ! | CACTGTTGGACTACTCTTTT+TGG | - | chr2_1:1126116-1126135 | Msa0186430:intron | 40.0% |
| TACCAAGCAGTATTCTTTGG+TGG | - | chr2_1:1126243-1126262 | Msa0186430:intron | 40.0% | |
| AAACCTATGCTTGTGGAGTT+TGG | - | chr2_1:1126307-1126326 | Msa0186430:intron | 40.0% | |
| TGTTTCCAAGAAAACTGCAC+AGG | - | chr2_1:1126331-1126350 | Msa0186430:intron | 40.0% | |
| AAATGAACCCTTACCACGAA+GGG | - | chr2_1:1126539-1126558 | Msa0186430:intron | 40.0% | |
| TGAGTGAAGATATTGGCCAA+TGG | - | chr2_1:1126795-1126814 | Msa0186430:intron | 40.0% | |
| ATCACAGGCTAACAGTTGTT+TGG | + | chr2_1:1126827-1126846 | None:intergenic | 40.0% | |
| ATCATAAACTGTGGCATCAC+AGG | + | chr2_1:1126842-1126861 | None:intergenic | 40.0% | |
| TCATTAGGACCTAAGATCTG+GGG | - | chr2_1:1127009-1127028 | Msa0186430:intron | 40.0% | |
| TGAATCTTGGGATTGTACCT+AGG | + | chr2_1:1127158-1127177 | None:intergenic | 40.0% | |
| CATCATACCAGCTGAATCTT+GGG | + | chr2_1:1127170-1127189 | None:intergenic | 40.0% | |
| GGTATGATGCACAAGTTATC+TGG | - | chr2_1:1127181-1127200 | Msa0186430:CDS | 40.0% | |
| ATGATGCACAAGTTATCTGG+AGG | - | chr2_1:1127184-1127203 | Msa0186430:CDS | 40.0% | |
| TGATGCACAAGTTATCTGGA+GGG | - | chr2_1:1127185-1127204 | Msa0186430:CDS | 40.0% | |
| GCTACAGAATTCATGTCATG+TGG | + | chr2_1:1127220-1127239 | None:intergenic | 40.0% | |
| ! | CTGAATCATCTCTCCAGTTT+TGG | - | chr2_1:1127248-1127267 | Msa0186430:CDS | 40.0% |
| !! | TGCATTTCAAGTTCAGGATC+TGG | - | chr2_1:1127374-1127393 | Msa0186430:intron | 40.0% |
| TAGGATGGTAATCAACACTG+CGG | + | chr2_1:1127536-1127555 | None:intergenic | 40.0% | |
| AGGCATGTATCAGTAGAATG+AGG | + | chr2_1:1127597-1127616 | None:intergenic | 40.0% | |
| CAACGTCTTTGTGTTCATGT+TGG | - | chr2_1:1127873-1127892 | Msa0186430:intron | 40.0% | |
| ATGAGTCAGGGATACACATT+TGG | - | chr2_1:1127937-1127956 | Msa0186430:intron | 40.0% | |
| TGAGTCAGGGATACACATTT+GGG | - | chr2_1:1127938-1127957 | Msa0186430:intron | 40.0% | |
| !! | AGCTCTTGGATTGGAACTTT+TGG | + | chr2_1:1127975-1127994 | None:intergenic | 40.0% |
| TTACTTGTATTGCCAGGACA+TGG | - | chr2_1:1128257-1128276 | Msa0186430:intron | 40.0% | |
| AAGTGTAACCCAGAGTATGA+CGG | - | chr2_1:1128286-1128305 | Msa0186430:intron | 40.0% | |
| GTTTATCTCAATCCTGAGCA+AGG | + | chr2_1:1128465-1128484 | None:intergenic | 40.0% | |
| !! | GATATTTCAGAGTGCTGGAA+CGG | - | chr2_1:1128603-1128622 | Msa0186430:intron | 40.0% |
| TAAGCAGTGGATCAACCAAA+CGG | + | chr2_1:1128779-1128798 | None:intergenic | 40.0% | |
| ! | ATCTTTGTCCTATGACGGAA+GGG | - | chr2_1:1128959-1128978 | Msa0186430:intron | 40.0% |
| ! | TTTTCTTACCCTTCCGTCAT+AGG | + | chr2_1:1128970-1128989 | None:intergenic | 40.0% |
| TGTTTATCTCAAGACTCCAG+AGG | + | chr2_1:1129189-1129208 | None:intergenic | 40.0% | |
| GGAGTCTTGAGATAAACAGA+TGG | - | chr2_1:1129191-1129210 | Msa0186430:intron | 40.0% | |
| AGACTCAACATAGTTGTTGG+TGG | - | chr2_1:1129218-1129237 | Msa0186430:intron | 40.0% | |
| GACTCAACATAGTTGTTGGT+GGG | - | chr2_1:1129219-1129238 | Msa0186430:intron | 40.0% | |
| ! | TGGGTTTGATGTTGGTTAAC+AGG | - | chr2_1:1129238-1129257 | Msa0186430:CDS | 40.0% |
| CTATGGATGATTCTTGGTCA+AGG | + | chr2_1:1129289-1129308 | None:intergenic | 40.0% | |
| AACCCAAAAATGGCACCGTA+GGG | + | chr2_1:1124901-1124920 | None:intergenic | 45.0% | |
| AAACCCAAAAATGGCACCGT+AGG | + | chr2_1:1124902-1124921 | None:intergenic | 45.0% | |
| CTTATTCGGCTTTCGGCAAA+TGG | - | chr2_1:1125302-1125321 | Msa0186430:three_prime_UTR | 45.0% | |
| ! | TGGAACCGAACTTTTCTGTG+AGG | - | chr2_1:1125322-1125341 | Msa0186430:exon | 45.0% |
| ! | GGAACCGAACTTTTCTGTGA+GGG | - | chr2_1:1125323-1125342 | Msa0186430:exon | 45.0% |
| ACAAGGTCCCAGATCTCATT+GGG | + | chr2_1:1125362-1125381 | None:intergenic | 45.0% | |
| AACAAGGTCCCAGATCTCAT+TGG | + | chr2_1:1125363-1125382 | None:intergenic | 45.0% | |
| AGCAGCAATATGGCAGATTC+CGG | - | chr2_1:1125692-1125711 | Msa0186430:intron | 45.0% | |
| TGGCAGATTCCGGAGTTATA+TGG | - | chr2_1:1125702-1125721 | Msa0186430:intron | 45.0% | |
| GTGCAAAACAATACTCCCTC+CGG | + | chr2_1:1125970-1125989 | None:intergenic | 45.0% | |
| TCAGGCAATGAGACAGTCTA+TGG | + | chr2_1:1126004-1126023 | None:intergenic | 45.0% | |
| ATAGACTGTCTCATTGCCTG+AGG | - | chr2_1:1126003-1126022 | Msa0186430:intron | 45.0% | |
| TGTCTCATTGCCTGAGGTTT+AGG | - | chr2_1:1126009-1126028 | Msa0186430:intron | 45.0% | |
| CTGACAACTTCCTAAACCTC+AGG | + | chr2_1:1126022-1126041 | None:intergenic | 45.0% | |
| GAAGTTGTCAGAAGACGTTG+AGG | - | chr2_1:1126031-1126050 | Msa0186430:intron | 45.0% | |
| ! | AGTATTCTTTGGTGGCCAAC+TGG | - | chr2_1:1126251-1126270 | Msa0186430:intron | 45.0% |
| CATCCAAACTCCACAAGCAT+AGG | + | chr2_1:1126313-1126332 | None:intergenic | 45.0% | |
| ! | TCGTACCTGTGCAGTTTTCT+TGG | + | chr2_1:1126339-1126358 | None:intergenic | 45.0% |
| CTGCACAGGTACGAAGTTTA+TGG | - | chr2_1:1126345-1126364 | Msa0186430:intron | 45.0% | |
| CGTGGTAAGGGTTCATTTGT+TGG | + | chr2_1:1126537-1126556 | None:intergenic | 45.0% | |
| CAAATGAACCCTTACCACGA+AGG | - | chr2_1:1126538-1126557 | Msa0186430:intron | 45.0% | |
| TTTCCTACCCTTCGTGGTAA+GGG | + | chr2_1:1126549-1126568 | None:intergenic | 45.0% | |
| ! | TTTTCCTACCCTTCGTGGTA+AGG | + | chr2_1:1126550-1126569 | None:intergenic | 45.0% |
| ! | ACATGTTTTCCTACCCTTCG+TGG | + | chr2_1:1126555-1126574 | None:intergenic | 45.0% |
| !!! | TGTATGTTTTGAGAGGAGGG+TGG | + | chr2_1:1127124-1127143 | None:intergenic | 45.0% |
| GTACAATCCCAAGATTCAGC+TGG | - | chr2_1:1127160-1127179 | Msa0186430:intron | 45.0% | |
| GCATCATACCAGCTGAATCT+TGG | + | chr2_1:1127171-1127190 | None:intergenic | 45.0% | |
| GATGCACAAGTTATCTGGAG+GGG | - | chr2_1:1127186-1127205 | Msa0186430:CDS | 45.0% | |
| TCGTTCTCACATCCCAAAAC+TGG | + | chr2_1:1127264-1127283 | None:intergenic | 45.0% | |
| GTAATCAACACTGCGGACAT+GGG | + | chr2_1:1127529-1127548 | None:intergenic | 45.0% | |
| TTACAGCAGAGCATGAGTCA+GGG | - | chr2_1:1127925-1127944 | Msa0186430:intron | 45.0% | |
| ATGACAGGTACCAATGTGTG+TGG | + | chr2_1:1128004-1128023 | None:intergenic | 45.0% | |
| GGCCGATCGTAACAACAAAT+GGG | + | chr2_1:1128124-1128143 | None:intergenic | 45.0% | |
| AGGCCGATCGTAACAACAAA+TGG | + | chr2_1:1128125-1128144 | None:intergenic | 45.0% | |
| ACACTTGACAATCCATGTCC+TGG | + | chr2_1:1128272-1128291 | None:intergenic | 45.0% | |
| GGATCATTCCGTCATACTCT+GGG | + | chr2_1:1128297-1128316 | None:intergenic | 45.0% | |
| AGGATCATTCCGTCATACTC+TGG | + | chr2_1:1128298-1128317 | None:intergenic | 45.0% | |
| ! | AGAGTATGACGGAATGATCC+TGG | - | chr2_1:1128297-1128316 | Msa0186430:intron | 45.0% |
| TTCGACTGTCAACTTGTGGT+CGG | - | chr2_1:1128627-1128646 | Msa0186430:intron | 45.0% | |
| ! | CATCTTTGTCCTATGACGGA+AGG | - | chr2_1:1128958-1128977 | Msa0186430:intron | 45.0% |
| TGTCAGTAATTTCCTGCCTC+TGG | - | chr2_1:1129170-1129189 | Msa0186430:intron | 45.0% | |
| !! | GTTGTTGGTGGGTTTGATGT+TGG | - | chr2_1:1129230-1129249 | Msa0186430:intron | 45.0% |
| !!! | ATTTTATTTTTTTATTTGAA+AGG | - | chr2_1:1128041-1128060 | Msa0186430:intron | 5.0% |
| !!! | ACACCCTACGGTGCCATTTT+TGG | - | chr2_1:1124895-1124914 | Msa0186430:three_prime_UTR | 50.0% |
| !!! | CACCCTACGGTGCCATTTTT+GGG | - | chr2_1:1124896-1124915 | Msa0186430:three_prime_UTR | 50.0% |
| GATCACACAAGTTTCCTCGC+CGG | - | chr2_1:1125164-1125183 | Msa0186430:three_prime_UTR | 50.0% | |
| CTGCCATATTGCTGCTCCAT+AGG | + | chr2_1:1125688-1125707 | None:intergenic | 50.0% | |
| GGCCACCAAAGAATACTGCT+TGG | + | chr2_1:1126248-1126267 | None:intergenic | 50.0% | |
| ! | TTCTTTGGTGGCCAACTGGA+AGG | - | chr2_1:1126255-1126274 | Msa0186430:intron | 50.0% |
| ! | TAGGACCTAAGATCTGGGGT+TGG | - | chr2_1:1127013-1127032 | Msa0186430:intron | 50.0% |
| ! | AGGACCTAAGATCTGGGGTT+GGG | - | chr2_1:1127014-1127033 | Msa0186430:intron | 50.0% |
| AAGTCCCAACCCCAGATCTT+AGG | + | chr2_1:1127021-1127040 | None:intergenic | 50.0% | |
| ACAAGTTATCTGGAGGGGCA+TGG | - | chr2_1:1127191-1127210 | Msa0186430:CDS | 50.0% | |
| ! | CAAGTTATCTGGAGGGGCAT+GGG | - | chr2_1:1127192-1127211 | Msa0186430:CDS | 50.0% |
| AAGTTCAGGATCTGGTGTGC+TGG | - | chr2_1:1127382-1127401 | Msa0186430:intron | 50.0% | |
| GGTAATCAACACTGCGGACA+TGG | + | chr2_1:1127530-1127549 | None:intergenic | 50.0% | |
| GTTACAGCAGAGCATGAGTC+AGG | - | chr2_1:1127924-1127943 | Msa0186430:intron | 50.0% | |
| GTTCCAATCCAAGAGCTTCC+AGG | - | chr2_1:1127978-1127997 | Msa0186430:intron | 50.0% | |
| AGAGAGAGAGAGAGAGAGAG+AGG | + | chr2_1:1128322-1128341 | None:intergenic | 50.0% | |
| GTACATATGCACAGACGCAC+TGG | - | chr2_1:1128515-1128534 | Msa0186430:intron | 50.0% | |
| CGGATTCGACTGTCAACTTG+TGG | - | chr2_1:1128623-1128642 | Msa0186430:intron | 50.0% | |
| AACGGACAGATGACTCTGCT+TGG | + | chr2_1:1128761-1128780 | None:intergenic | 50.0% | |
| AGCAGAGTCATCTGTCCGTT+TGG | - | chr2_1:1128761-1128780 | Msa0186430:intron | 50.0% | |
| CATGGAGTTCTCGTCAACCA+TGG | - | chr2_1:1128928-1128947 | Msa0186430:intron | 50.0% | |
| TATCTCAAGACTCCAGAGGC+AGG | + | chr2_1:1129185-1129204 | None:intergenic | 50.0% | |
| ATGGCACCGTAGGGTGTGTT+TGG | + | chr2_1:1124892-1124911 | None:intergenic | 55.0% | |
| TAAGGCTAAGAGTTCCGGCG+AGG | + | chr2_1:1125181-1125200 | None:intergenic | 55.0% | |
| GAACCCTTACCACGAAGGGT+AGG | - | chr2_1:1126543-1126562 | Msa0186430:intron | 55.0% | |
| AGGATCTGGTGTGCTGGAAG+AGG | - | chr2_1:1127388-1127407 | Msa0186430:intron | 55.0% | |
| GGATCTGGTGTGCTGGAAGA+GGG | - | chr2_1:1127389-1127408 | Msa0186430:intron | 55.0% | |
| TGGCCTGGAAGCTCTTGGAT+TGG | + | chr2_1:1127984-1128003 | None:intergenic | 55.0% | |
| AGCTTCCAGGCCACACACAT+TGG | - | chr2_1:1127991-1128010 | Msa0186430:intron | 55.0% | |
| AGGTACCAATGTGTGTGGCC+TGG | + | chr2_1:1127999-1128018 | None:intergenic | 55.0% | |
| AGAGAGAGAGAGAGAGGACC+AGG | + | chr2_1:1128318-1128337 | None:intergenic | 55.0% | |
| GGGTGAATACACCCTTGCTC+AGG | - | chr2_1:1128450-1128469 | Msa0186430:intron | 55.0% | |
| ! | TGCACAGACGCACTGGTGAA+AGG | - | chr2_1:1128522-1128541 | Msa0186430:intron | 55.0% |
| ! | ACAGACGCACTGGTGAAAGG+TGG | - | chr2_1:1128525-1128544 | Msa0186430:intron | 55.0% |
| ! | CAGACGCACTGGTGAAAGGT+GGG | - | chr2_1:1128526-1128545 | Msa0186430:intron | 55.0% |
| GTGTGTGGCCTGGAAGCTCT+TGG | + | chr2_1:1127989-1128008 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 1124888 | 1129563 | 1124888 | ID=Msa0186430;Name=Msa0186430 |
| chr2_1 | mRNA | 1124888 | 1129563 | 1124888 | ID=Msa0186430-mRNA-1;Parent=Msa0186430;Name=Msa0186430-mRNA-1;_AED=0.28;_eAED=0.28;_QI=106|0.83|0.84|1|0.83|0.84|13|442|311 |
| chr2_1 | exon | 1124888 | 1125371 | 1124888 | ID=Msa0186430-mRNA-1:exon:517;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1125471 | 1125529 | 1125471 | ID=Msa0186430-mRNA-1:exon:516;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1125620 | 1125693 | 1125620 | ID=Msa0186430-mRNA-1:exon:515;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1125768 | 1125838 | 1125768 | ID=Msa0186430-mRNA-1:exon:514;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1126133 | 1126178 | 1126133 | ID=Msa0186430-mRNA-1:exon:513;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1126439 | 1126527 | 1126439 | ID=Msa0186430-mRNA-1:exon:512;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1126879 | 1126948 | 1126879 | ID=Msa0186430-mRNA-1:exon:511;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1127164 | 1127291 | 1127164 | ID=Msa0186430-mRNA-1:exon:510;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1128099 | 1128198 | 1128099 | ID=Msa0186430-mRNA-1:exon:509;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1128736 | 1128743 | 1128736 | ID=Msa0186430-mRNA-1:exon:508;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1129036 | 1129155 | 1129036 | ID=Msa0186430-mRNA-1:exon:507;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1129237 | 1129320 | 1129237 | ID=Msa0186430-mRNA-1:exon:506;Parent=Msa0186430-mRNA-1 |
| chr2_1 | exon | 1129413 | 1129563 | 1129413 | ID=Msa0186430-mRNA-1:exon:505;Parent=Msa0186430-mRNA-1 |
| chr2_1 | five_prime_UTR | 1129458 | 1129563 | 1129458 | ID=Msa0186430-mRNA-1:five_prime_utr;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1129413 | 1129457 | 1129413 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1129237 | 1129320 | 1129237 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1129036 | 1129155 | 1129036 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1128736 | 1128743 | 1128736 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1128099 | 1128198 | 1128099 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1127164 | 1127291 | 1127164 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1126879 | 1126948 | 1126879 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1126439 | 1126527 | 1126439 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1126133 | 1126178 | 1126133 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1125768 | 1125838 | 1125768 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1125620 | 1125693 | 1125620 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1125471 | 1125529 | 1125471 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | CDS | 1125330 | 1125371 | 1125330 | ID=Msa0186430-mRNA-1:cds;Parent=Msa0186430-mRNA-1 |
| chr2_1 | three_prime_UTR | 1124888 | 1125329 | 1124888 | ID=Msa0186430-mRNA-1:three_prime_utr;Parent=Msa0186430-mRNA-1 |
| Gene Sequence |
| Protein sequence |
