Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186590 | XP_013462243.1 | 91.209 | 728 | 17 | 1 | 1 | 681 | 1 | 728 | 0.0 | 1361 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186590 | sp|P48147|PPCE_HUMAN | 50.831 | 722 | 290 | 7 | 8 | 680 | 4 | 709 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186590 | A0A072V4K2 | 91.209 | 728 | 17 | 1 | 1 | 681 | 1 | 728 | 0.0 | 1361 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0186590 | Msa0385710 | 0.964919 | 6.156100e-124 | -8.615850e-47 |
| Msa0186590 | Msa0435600 | 0.961157 | 2.234928e-119 | -8.615850e-47 |
| Msa0186590 | Msa0479720 | 0.957545 | 2.095404e-115 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186590 | MtrunA17_Chr3g0143651 | 91.209 | 728 | 17 | 1 | 1 | 681 | 1 | 728 | 0.0 | 1361 |
| Msa0186590 | MtrunA17_Chr1g0157311 | 74.932 | 734 | 131 | 3 | 1 | 681 | 55 | 788 | 0.0 | 1123 |
| Msa0186590 | MtrunA17_Chr1g0157291 | 87.135 | 171 | 22 | 0 | 383 | 553 | 1 | 171 | 5.83e-108 | 324 |
| Msa0186590 | MtrunA17_Chr1g0157281 | 71.084 | 166 | 48 | 0 | 151 | 316 | 11 | 176 | 8.66e-77 | 243 |
| Msa0186590 | MtrunA17_Chr1g0157301 | 84.375 | 128 | 17 | 1 | 557 | 681 | 3 | 130 | 1.21e-72 | 231 |
| Msa0186590 | MtrunA17_Chr1g0212361 | 27.536 | 621 | 366 | 19 | 79 | 675 | 201 | 761 | 4.34e-52 | 192 |
| Msa0186590 | MtrunA17_Chr5g0420581 | 25.060 | 419 | 236 | 12 | 258 | 611 | 17 | 422 | 1.12e-23 | 104 |
| Msa0186590 | MtrunA17_Chr8g0374081 | 31.925 | 213 | 132 | 4 | 395 | 603 | 518 | 721 | 1.35e-21 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0186590 | AT1G76140.1 | 72.176 | 726 | 155 | 1 | 3 | 681 | 70 | 795 | 0.0 | 1108 |
| Msa0186590 | AT1G76140.2 | 71.901 | 726 | 154 | 2 | 3 | 681 | 70 | 792 | 0.0 | 1098 |
| Msa0186590 | AT1G20380.1 | 69.505 | 728 | 175 | 1 | 1 | 681 | 4 | 731 | 0.0 | 1062 |
| Msa0186590 | AT1G20380.2 | 74.692 | 569 | 144 | 0 | 113 | 681 | 1 | 569 | 0.0 | 909 |
| Msa0186590 | AT1G50380.1 | 25.241 | 622 | 381 | 17 | 79 | 676 | 143 | 704 | 1.99e-49 | 184 |
| Msa0186590 | AT1G50380.2 | 25.241 | 622 | 381 | 17 | 79 | 676 | 209 | 770 | 3.34e-49 | 184 |
| Msa0186590 | AT1G69020.1 | 27.899 | 276 | 182 | 4 | 406 | 678 | 493 | 754 | 6.68e-29 | 123 |
| Msa0186590 | AT1G69020.2 | 27.899 | 276 | 182 | 4 | 406 | 678 | 525 | 786 | 8.61e-29 | 123 |
| Msa0186590 | AT5G66960.1 | 29.596 | 223 | 144 | 4 | 406 | 625 | 536 | 748 | 3.21e-15 | 80.1 |
Find 182 sgRNAs with CRISPR-Local
Find 405 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCTCCAAACGAATATTT+AGG | 0.117671 | 2_1:+1291348 | None:intergenic |
| ATTCGTGGTGGTGGAGAATA+TGG | 0.163223 | 2_1:-1289690 | Msa0186590:CDS |
| ACTCGGACTAGTTTATATTT+TGG | 0.203708 | 2_1:+1290483 | None:intergenic |
| ACCTTCGATGCATAACTTTC+TGG | 0.218698 | 2_1:+1289566 | None:intergenic |
| AATGGAATAAAATTTCTTTC+AGG | 0.241282 | 2_1:-1287539 | Msa0186590:three_prime_UTR |
| GATCTTGGTACCATCTTTAC+TGG | 0.241696 | 2_1:+1289872 | None:intergenic |
| AATGTTCATTGTTGCGAAAA+AGG | 0.252900 | 2_1:-1289847 | Msa0186590:CDS |
| AAGCATTCCGGAATATTTAA+AGG | 0.255157 | 2_1:-1287338 | Msa0186590:three_prime_UTR |
| AAATATTCCGGAATGCTTAC+AGG | 0.259363 | 2_1:+1287343 | None:intergenic |
| CAGTCAATGCGACAAATTAT+AGG | 0.263877 | 2_1:+1287777 | None:intergenic |
| GACAAATTATAGGGTTTGTT+TGG | 0.287994 | 2_1:+1287787 | None:intergenic |
| CATGCTTGGACCTCAGATTA+TGG | 0.294369 | 2_1:-1289251 | Msa0186590:CDS |
| TTCCTCCAAACGAATATTTA+GGG | 0.301529 | 2_1:+1291349 | None:intergenic |
| GCATGACCCTTTAAATATTC+CGG | 0.302181 | 2_1:+1287331 | None:intergenic |
| TGTGATTGTTTCGTTAAGTT+TGG | 0.304907 | 2_1:+1292654 | None:intergenic |
| TCACACCCGTGTCTGTTATA+TGG | 0.305529 | 2_1:-1289807 | Msa0186590:CDS |
| GATATTGCAGAGGTTCGTTT+AGG | 0.308709 | 2_1:+1292914 | None:intergenic |
| ACAAATTATAGGGTTTGTTT+GGG | 0.322529 | 2_1:+1287788 | None:intergenic |
| GAAAGGGTTTGTTGAGAAAC+AGG | 0.331155 | 2_1:-1292719 | Msa0186590:CDS |
| CAGTAGTACAGTTTGTTAAC+TGG | 0.333458 | 2_1:+1290657 | None:intergenic |
| TAAACTAGTCCGAGTAGATT+TGG | 0.336481 | 2_1:-1290475 | Msa0186590:CDS |
| TGTTGGTGCTTGCATAAATC+AGG | 0.336647 | 2_1:-1289523 | Msa0186590:intron |
| TAAATGATTGACGATTCATT+TGG | 0.353765 | 2_1:+1287455 | None:intergenic |
| CCTTCGATGCATAACTTTCT+GGG | 0.355840 | 2_1:+1289567 | None:intergenic |
| AACAATGAACATTGGGATCT+TGG | 0.362802 | 2_1:+1289857 | None:intergenic |
| CCTTTCACTTCTTCAGCATC+AGG | 0.363467 | 2_1:+1292736 | None:intergenic |
| ATTGTACTCACAAAACATTT+AGG | 0.364515 | 2_1:-1289735 | Msa0186590:CDS |
| GATAATAAAGCATATGATAA+AGG | 0.364685 | 2_1:+1291427 | None:intergenic |
| AGTCAATGCGACAAATTATA+GGG | 0.366757 | 2_1:+1287778 | None:intergenic |
| TTAGTTCCAGTGGTAGTGAT+TGG | 0.369107 | 2_1:-1291965 | Msa0186590:CDS |
| CCGTGTCTGTTATATGGATA+TGG | 0.375864 | 2_1:-1289801 | Msa0186590:CDS |
| GGGTCGTCCAACAAAGAAAA+TGG | 0.378215 | 2_1:-1287736 | Msa0186590:intron |
| TATTCAACAGAGAAATGAAT+TGG | 0.387722 | 2_1:+1287503 | None:intergenic |
| CTCACCCATGATAAAGTATC+AGG | 0.390599 | 2_1:+1291900 | None:intergenic |
| GTTATCATGTGTCCAGCTAA+TGG | 0.391388 | 2_1:+1291787 | None:intergenic |
| GAAAACCCTAAATATTCGTT+TGG | 0.392760 | 2_1:-1291354 | Msa0186590:CDS |
| TATCAGTGCAACCTGGGAAC+AGG | 0.393410 | 2_1:-1290192 | Msa0186590:CDS |
| GGAGGAATTGTTACTGATGA+TGG | 0.394917 | 2_1:-1291333 | Msa0186590:CDS |
| AGAACATCAGCCCATGTGTT+TGG | 0.397071 | 2_1:+1290447 | None:intergenic |
| ATCTTGGTACCATCTTTACT+GGG | 0.399846 | 2_1:+1289873 | None:intergenic |
| AGAGAAATGAATTGGTTTGC+CGG | 0.401010 | 2_1:+1287511 | None:intergenic |
| ATATTGCAGAGGTTCGTTTA+GGG | 0.403171 | 2_1:+1292915 | None:intergenic |
| AAGTTAACAAGTTAACAATA+AGG | 0.403492 | 2_1:+1287298 | None:intergenic |
| AAATGATTGACGATTCATTT+GGG | 0.405369 | 2_1:+1287456 | None:intergenic |
| TTTGATGACTTCATTTCTGC+TGG | 0.418535 | 2_1:-1289621 | Msa0186590:CDS |
| GATGCATAACTTTCTGGGTT+GGG | 0.421422 | 2_1:+1289572 | None:intergenic |
| TTACTTGCCTGTAAGCATTC+CGG | 0.422857 | 2_1:-1287350 | Msa0186590:three_prime_UTR |
| ACTACACTCATTGAAGCTAT+TGG | 0.423920 | 2_1:-1288102 | Msa0186590:CDS |
| GTACAGAGACCTGAGCTCTT+TGG | 0.425018 | 2_1:-1289408 | Msa0186590:intron |
| ATACTCGTTAATTATTATCA+AGG | 0.428268 | 2_1:+1293009 | None:intergenic |
| GAGTCCGCATGTGCTGTAAA+TGG | 0.429061 | 2_1:-1290399 | Msa0186590:CDS |
| TATCAATAAGTTTGACAAAA+GGG | 0.434231 | 2_1:+1290577 | None:intergenic |
| TGAGCTCTTTGGCTGTGCAT+TGG | 0.436966 | 2_1:-1289397 | Msa0186590:CDS |
| GCCGTCAACAACATAGTTGA+TGG | 0.439546 | 2_1:+1288149 | None:intergenic |
| AGCATTCCGGAATATTTAAA+GGG | 0.440020 | 2_1:-1287337 | Msa0186590:three_prime_UTR |
| TTATCAATAAGTTTGACAAA+AGG | 0.440234 | 2_1:+1290576 | None:intergenic |
| AGTGGTTGTTACCATCGATA+AGG | 0.440898 | 2_1:+1292832 | None:intergenic |
| ACAGGTTCAATTGACGAATT+CGG | 0.443464 | 2_1:-1292701 | Msa0186590:CDS |
| ATTGGCTCATGTTGGCGTTA+TGG | 0.447955 | 2_1:-1289379 | Msa0186590:CDS |
| TGTCGCATTGACTGCAAAGC+TGG | 0.451677 | 2_1:-1287768 | Msa0186590:CDS |
| CAAGTAAGAGACTTAAAATC+AGG | 0.451702 | 2_1:-1290330 | Msa0186590:CDS |
| CTCCGAGTTTCAAGTCAATC+AGG | 0.455720 | 2_1:-1290118 | Msa0186590:intron |
| ACAAAGAGGAAGAGTTTCAT+TGG | 0.457004 | 2_1:-1289220 | Msa0186590:CDS |
| TTCTGTTCTATGCCGAAGAA+AGG | 0.457239 | 2_1:+1292952 | None:intergenic |
| ATTGTTACTCAGGTCATGCT+TGG | 0.458027 | 2_1:-1289265 | Msa0186590:intron |
| TGCATAATGTCCGGCGACCA+TGG | 0.458324 | 2_1:-1288202 | Msa0186590:CDS |
| TCACGTAATATCTTCAGATC+AGG | 0.458498 | 2_1:+1290165 | None:intergenic |
| CGATGCATAACTTTCTGGGT+TGG | 0.460252 | 2_1:+1289571 | None:intergenic |
| GATCAGGAGTCCCTGTTCCC+AGG | 0.461520 | 2_1:+1290181 | None:intergenic |
| TAGTTCCAGTGGTAGTGATT+GGG | 0.463735 | 2_1:-1291964 | Msa0186590:CDS |
| CCCATCAACTATGTTGTTGA+CGG | 0.472540 | 2_1:-1288150 | Msa0186590:CDS |
| ACAAACCTATGGTAAATTTG+TGG | 0.473864 | 2_1:+1289343 | None:intergenic |
| TAAACTGTGCCAATGTCAAT+TGG | 0.475125 | 2_1:+1290288 | None:intergenic |
| GATGGAGAAGTGGTAGATGC+TGG | 0.477294 | 2_1:-1291468 | Msa0186590:CDS |
| TTACGTGAAATTGCAGTCCC+TGG | 0.488900 | 2_1:-1290150 | Msa0186590:CDS |
| TATCGTCTATCAGTGCAACC+TGG | 0.489294 | 2_1:-1290199 | Msa0186590:CDS |
| AAATTTCTTTCAGGCAATGC+CGG | 0.492630 | 2_1:-1287530 | Msa0186590:three_prime_UTR |
| AACCCTAAATATTCGTTTGG+AGG | 0.493035 | 2_1:-1291351 | Msa0186590:CDS |
| GTGGAGAATATGGGGAAGAA+TGG | 0.493539 | 2_1:-1289680 | Msa0186590:CDS |
| TTTACAAGCTTTCTGTCTCC+CGG | 0.495034 | 2_1:-1290222 | Msa0186590:CDS |
| TGCAAAGCTGGACATGGAGC+GGG | 0.497868 | 2_1:-1287756 | Msa0186590:CDS |
| GACATCACTTACTTGGGTGC+TGG | 0.498134 | 2_1:+1291740 | None:intergenic |
| TACGTGAAATTGCAGTCCCT+GGG | 0.499626 | 2_1:-1290149 | Msa0186590:CDS |
| TTCGTGGTGGTGGAGAATAT+GGG | 0.500297 | 2_1:-1289689 | Msa0186590:CDS |
| TACTGCATTGCGAATATTCG+TGG | 0.503623 | 2_1:-1289705 | Msa0186590:CDS |
| CTGAGCCTGATACTTTATCA+TGG | 0.506192 | 2_1:-1291905 | Msa0186590:CDS |
| CACACCCTTCGCTAATATAG+AGG | 0.509249 | 2_1:+1290682 | None:intergenic |
| CGGTTCCACAAATTTACCAT+AGG | 0.509404 | 2_1:-1289348 | Msa0186590:intron |
| GGCTGTGCATTGGCTCATGT+TGG | 0.510464 | 2_1:-1289387 | Msa0186590:CDS |
| GGGTATTGAATTGACTTGTC+AGG | 0.510562 | 2_1:+1288170 | None:intergenic |
| GAGTGAAGATGCCAAGTACT+TGG | 0.512289 | 2_1:-1291997 | Msa0186590:CDS |
| GTGGTTGTTACCATCGATAA+GGG | 0.513200 | 2_1:+1292833 | None:intergenic |
| AAGCGCATAAGCCAAGTACT+TGG | 0.519968 | 2_1:+1291986 | None:intergenic |
| AGCAATGGTGGACTTCTTGT+TGG | 0.523888 | 2_1:-1289540 | Msa0186590:CDS |
| CTCCTCCTCTATATTAGCGA+AGG | 0.526676 | 2_1:-1290687 | Msa0186590:CDS |
| AATGCACAGCCAAAGAGCTC+AGG | 0.531544 | 2_1:+1289399 | None:intergenic |
| TGGTGAATACCTTGTGTCCA+CGG | 0.533386 | 2_1:-1289601 | Msa0186590:CDS |
| GATCACAGTATATATAAGAA+TGG | 0.534191 | 2_1:-1287557 | Msa0186590:three_prime_UTR |
| TTCATTTGGGTATGGTAGCA+TGG | 0.535902 | 2_1:+1287469 | None:intergenic |
| GATGCTGTTCCCATGGTCGC+CGG | 0.536594 | 2_1:+1288192 | None:intergenic |
| CATCAACTGCCAATTGACAT+TGG | 0.537917 | 2_1:-1290297 | Msa0186590:CDS |
| TCAAGTAACTTACTATCAGT+TGG | 0.539330 | 2_1:+1290373 | None:intergenic |
| GAGTCGTCTCTGCGAGCCGC+GGG | 0.539395 | 2_1:+1292892 | None:intergenic |
| ATTGACGATTCATTTGGGTA+TGG | 0.544799 | 2_1:+1287461 | None:intergenic |
| AGATGTTGAAATGTGAAAGA+AGG | 0.547877 | 2_1:+1292982 | None:intergenic |
| AATAAGTTTGACAAAAGGGA+GGG | 0.548091 | 2_1:+1290581 | None:intergenic |
| GCATAATGTCCGGCGACCAT+GGG | 0.548592 | 2_1:-1288201 | Msa0186590:CDS |
| CCCAGAAAGTTATGCATCGA+AGG | 0.551858 | 2_1:-1289567 | Msa0186590:CDS |
| AGTCGCCCAATCACTACCAC+TGG | 0.556942 | 2_1:+1291959 | None:intergenic |
| ACTCACCATTGCATAATGTC+CGG | 0.556955 | 2_1:-1288211 | Msa0186590:CDS |
| TATAAAAGTGTTGCGTATCG+AGG | 0.557739 | 2_1:-1291937 | Msa0186590:CDS |
| TCCTCCTCTATATTAGCGAA+GGG | 0.558762 | 2_1:-1290686 | Msa0186590:CDS |
| CTGATGCTGAAGAAGTGAAA+GGG | 0.561050 | 2_1:-1292735 | Msa0186590:CDS |
| CCTGATGCTGAAGAAGTGAA+AGG | 0.563636 | 2_1:-1292736 | Msa0186590:CDS |
| AGTACATCTTTGTCAGACTC+TGG | 0.565246 | 2_1:+1290423 | None:intergenic |
| GAGGAATTGTTACTGATGAT+GGG | 0.565555 | 2_1:-1291332 | Msa0186590:CDS |
| TGCATCGAAGGTGGAAGCAA+TGG | 0.565720 | 2_1:-1289555 | Msa0186590:CDS |
| TTGGTTTCTCCAAATCTACT+CGG | 0.566098 | 2_1:+1290466 | None:intergenic |
| TTGGCGTTATGGACATGCTA+CGG | 0.568137 | 2_1:-1289368 | Msa0186590:CDS |
| ACACTCATTGAAGCTATTGG+CGG | 0.569808 | 2_1:-1288099 | Msa0186590:intron |
| ATGGAGAAGTGGTAGATGCT+GGG | 0.570455 | 2_1:-1291467 | Msa0186590:CDS |
| GTATGTGCTATGTAGTAGCT+TGG | 0.575854 | 2_1:-1287820 | Msa0186590:CDS |
| TATATATACTGTGATCGAGT+GGG | 0.576156 | 2_1:+1287564 | None:intergenic |
| TGCACGGCGTGAAGATAATG+TGG | 0.577932 | 2_1:-1290256 | Msa0186590:CDS |
| GGGGAAGAATGGCATAAAGC+AGG | 0.580032 | 2_1:-1289669 | Msa0186590:CDS |
| ATCAGTGCAACCTGGGAACA+GGG | 0.581043 | 2_1:-1290191 | Msa0186590:CDS |
| GGGTATAACCCGTGGACACA+AGG | 0.581061 | 2_1:+1289592 | None:intergenic |
| GTTGCACTGATAGACGATAC+CGG | 0.582502 | 2_1:+1290203 | None:intergenic |
| AGAGTCGTCTCTGCGAGCCG+CGG | 0.586403 | 2_1:+1292891 | None:intergenic |
| CCATATCCATATAACAGACA+CGG | 0.588695 | 2_1:+1289801 | None:intergenic |
| ATAAGTTTGACAAAAGGGAG+GGG | 0.588761 | 2_1:+1290582 | None:intergenic |
| CATAGAACAGAACAATAGCA+TGG | 0.589976 | 2_1:-1292941 | Msa0186590:exon |
| TCGTGGTGGTGGAGAATATG+GGG | 0.590290 | 2_1:-1289688 | Msa0186590:CDS |
| GGTGAATACCTTGTGTCCAC+GGG | 0.591999 | 2_1:-1289600 | Msa0186590:CDS |
| CCGTCAACAACATAGTTGAT+GGG | 0.594747 | 2_1:+1288150 | None:intergenic |
| CTGCAAAGCTGGACATGGAG+CGG | 0.598830 | 2_1:-1287757 | Msa0186590:CDS |
| AACTCGGAGCGATCAAACCC+AGG | 0.600975 | 2_1:+1290132 | None:intergenic |
| CTTACTTGGGTGCTGGATAG+CGG | 0.601152 | 2_1:+1291747 | None:intergenic |
| TTGTCAGGATGCTGTTCCCA+TGG | 0.603618 | 2_1:+1288185 | None:intergenic |
| ATACTGTAGAGATGGAGAAG+TGG | 0.604745 | 2_1:-1291478 | Msa0186590:intron |
| ATTGACTGCAAAGCTGGACA+TGG | 0.604773 | 2_1:-1287762 | Msa0186590:CDS |
| GCTTATGCGCTTAGTTCCAG+TGG | 0.605231 | 2_1:-1291975 | Msa0186590:CDS |
| TTATATATACTGTGATCGAG+TGG | 0.610417 | 2_1:+1287563 | None:intergenic |
| CAATAAGTTTGACAAAAGGG+AGG | 0.615544 | 2_1:+1290580 | None:intergenic |
| CAGTTTATGATATTTCTGCA+CGG | 0.617175 | 2_1:-1290272 | Msa0186590:CDS |
| CAAATTATAGGGTTTGTTTG+GGG | 0.617870 | 2_1:+1287789 | None:intergenic |
| ATTGCGAATATTCGTGGTGG+TGG | 0.619449 | 2_1:-1289699 | Msa0186590:CDS |
| GTTACCATTTACAGCACATG+CGG | 0.620959 | 2_1:+1290395 | None:intergenic |
| AGAAAGTTATGCATCGAAGG+TGG | 0.621187 | 2_1:-1289564 | Msa0186590:CDS |
| ATCGTCTATCAGTGCAACCT+GGG | 0.624634 | 2_1:-1290198 | Msa0186590:CDS |
| TTGTTACCATCGATAAGGGT+CGG | 0.625434 | 2_1:+1292837 | None:intergenic |
| AATTGGCAGTTGATGCAACA+AGG | 0.625956 | 2_1:+1290305 | None:intergenic |
| ATCGAAGGTGGAAGCAATGG+TGG | 0.626239 | 2_1:-1289552 | Msa0186590:CDS |
| TACCTGATTGACTTGAAACT+CGG | 0.626953 | 2_1:+1290116 | None:intergenic |
| TCTGGGTTGGGTATAACCCG+TGG | 0.626963 | 2_1:+1289584 | None:intergenic |
| AGATCGATGAAACTGCTGAT+CGG | 0.628843 | 2_1:-1287634 | Msa0186590:CDS |
| TTGCACTGATAGACGATACC+GGG | 0.631013 | 2_1:+1290204 | None:intergenic |
| GTCTGCACAACCATAATCTG+AGG | 0.634336 | 2_1:+1289241 | None:intergenic |
| ACTACATAGCACATACTGCA+TGG | 0.637775 | 2_1:+1287827 | None:intergenic |
| TACAATGCGACTAACACTGA+AGG | 0.640264 | 2_1:+1289752 | None:intergenic |
| ATTTGGAGAAACCAAACACA+TGG | 0.643157 | 2_1:-1290458 | Msa0186590:CDS |
| AATAGCTTCAATGAGTGTAG+TGG | 0.645106 | 2_1:+1288104 | None:intergenic |
| TGAGCCTGATACTTTATCAT+GGG | 0.645810 | 2_1:-1291904 | Msa0186590:intron |
| ATAGAACAGAACAATAGCAT+GGG | 0.651501 | 2_1:-1292940 | Msa0186590:exon |
| TTATGGTTGTGCAGACAAAG+AGG | 0.652699 | 2_1:-1289234 | Msa0186590:CDS |
| ACCCTTCGCTAATATAGAGG+AGG | 0.652831 | 2_1:+1290685 | None:intergenic |
| AAATCGCCGACCCTTATCGA+TGG | 0.652884 | 2_1:-1292843 | Msa0186590:intron |
| CGAGCCGCGGGATATTGCAG+AGG | 0.656134 | 2_1:+1292904 | None:intergenic |
| AATTGTTACTGATGATGGGA+AGG | 0.656399 | 2_1:-1291328 | Msa0186590:intron |
| AGCTGGACACATGATAACAA+AGG | 0.661177 | 2_1:-1291782 | Msa0186590:CDS |
| GGTCGCCGGACATTATGCAA+TGG | 0.661401 | 2_1:+1288206 | None:intergenic |
| CATATCCATATAACAGACAC+GGG | 0.665897 | 2_1:+1289802 | None:intergenic |
| ATCATGTGTCCAGCTAATGG+AGG | 0.666044 | 2_1:+1291790 | None:intergenic |
| ATGCGACTAACACTGAAGGA+TGG | 0.667946 | 2_1:+1289756 | None:intergenic |
| ACTCGGAGCGATCAAACCCA+GGG | 0.675535 | 2_1:+1290133 | None:intergenic |
| TGTCTGTTATATGGATATGG+TGG | 0.678377 | 2_1:-1289798 | Msa0186590:CDS |
| TGGTACTTCAGAAATTGATG+CGG | 0.690564 | 2_1:-1287384 | Msa0186590:three_prime_UTR |
| TGCATTGCGAATATTCGTGG+TGG | 0.694680 | 2_1:-1289702 | Msa0186590:CDS |
| TCTTGGTACCATCTTTACTG+GGG | 0.699589 | 2_1:+1289874 | None:intergenic |
| CGAACCTCTGCAATATCCCG+CGG | 0.709263 | 2_1:-1292908 | Msa0186590:CDS |
| TTTGGAGAAACCAAACACAT+GGG | 0.715304 | 2_1:-1290457 | Msa0186590:CDS |
| TCTGTCATTGACGATTACCA+TGG | 0.715354 | 2_1:-1292871 | Msa0186590:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAACAAAGTATAAATA+TGG | - | chr2_1:1288633-1288652 | Msa0186590:intron | 10.0% |
| !! | GATATATATTAAAGAAAATA+AGG | + | chr2_1:1291182-1291201 | None:intergenic | 10.0% |
| !!! | ATTTTTCTTTTCTTTTTTGA+AGG | - | chr2_1:1287527-1287546 | Msa0186590:three_prime_UTR | 15.0% |
| !! | AAAACATTAAAAATCATCAA+TGG | + | chr2_1:1288468-1288487 | None:intergenic | 15.0% |
| !!! | TATGCTTTATTATCATTTTT+TGG | - | chr2_1:1288877-1288896 | Msa0186590:intron | 15.0% |
| !!! | ATGCTTTATTATCATTTTTT+GGG | - | chr2_1:1288878-1288897 | Msa0186590:intron | 15.0% |
| !!! | GTTTACATTTTTAACTAATA+AGG | - | chr2_1:1289784-1289803 | Msa0186590:CDS | 15.0% |
| !! | AAATTTATCCTTAATATTTC+AGG | + | chr2_1:1291125-1291144 | None:intergenic | 15.0% |
| !!! | TTTTCTTTAATATATATCAG+CGG | - | chr2_1:1291184-1291203 | Msa0186590:intron | 15.0% |
| !! | AAAAGAAAACAAAATCAAAA+TGG | + | chr2_1:1291516-1291535 | None:intergenic | 15.0% |
| !! | TCATTTATCAATCAATATAA+TGG | - | chr2_1:1291656-1291675 | Msa0186590:intron | 15.0% |
| !!! | AGTTCAATAATTATTTCTTA+AGG | - | chr2_1:1291780-1291799 | Msa0186590:CDS | 15.0% |
| !!! | GTTCAATAATTATTTCTTAA+GGG | - | chr2_1:1291781-1291800 | Msa0186590:CDS | 15.0% |
| !!! | TTCAATAATTATTTCTTAAG+GGG | - | chr2_1:1291782-1291801 | Msa0186590:CDS | 15.0% |
| !! | ATACTCGTTAATTATTATCA+AGG | + | chr2_1:1287289-1287308 | None:intergenic | 20.0% |
| !! | TTTCATAAACTCTTTAGTAT+AGG | - | chr2_1:1288057-1288076 | Msa0186590:intron | 20.0% |
| !!! | AAGTTATCTTTTCATTTTAC+AGG | - | chr2_1:1288190-1288209 | Msa0186590:CDS | 20.0% |
| !!! | GATTTTTAATGTTTTGTTTC+AGG | - | chr2_1:1288473-1288492 | Msa0186590:intron | 20.0% |
| !! | TTGAATTGGTATTATCTATA+TGG | - | chr2_1:1288697-1288716 | Msa0186590:intron | 20.0% |
| !! | GATAATAAAGCATATGATAA+AGG | + | chr2_1:1288871-1288890 | None:intergenic | 20.0% |
| !! | TAAAATAAGAAAACATGCAA+CGG | - | chr2_1:1289052-1289071 | Msa0186590:intron | 20.0% |
| !! | ATAAGAATTCAAAACTATTC+AGG | + | chr2_1:1289396-1289415 | None:intergenic | 20.0% |
| !!! | GTTATGTAATTTTATGCATA+TGG | - | chr2_1:1289536-1289555 | Msa0186590:CDS | 20.0% |
| !! | TATCAATAAGTTTGACAAAA+GGG | + | chr2_1:1289721-1289740 | None:intergenic | 20.0% |
| !! | TTATCAATAAGTTTGACAAA+AGG | + | chr2_1:1289722-1289741 | None:intergenic | 20.0% |
| !! | AAGTTGTTACATTGTTAAAT+AGG | - | chr2_1:1290285-1290304 | Msa0186590:CDS | 20.0% |
| !! | AGGATAAATTTCAATATGTT+AGG | - | chr2_1:1291134-1291153 | Msa0186590:intron | 20.0% |
| !! | AATTAAGGGATATTAATCAA+AGG | + | chr2_1:1291452-1291471 | None:intergenic | 20.0% |
| !! | TTTGATTAATATCCCTTAAT+TGG | - | chr2_1:1291451-1291470 | Msa0186590:CDS | 20.0% |
| !! | ATTAACAATAGTCCAATTAA+GGG | + | chr2_1:1291466-1291485 | None:intergenic | 20.0% |
| !! | TTTATCAATCAATATAATGG+AGG | - | chr2_1:1291659-1291678 | Msa0186590:intron | 20.0% |
| !! | CTCTATAAATATCAAAATGA+TGG | - | chr2_1:1291693-1291712 | Msa0186590:intron | 20.0% |
| !!! | TTTATTGTTTGGATATGTTT+TGG | - | chr2_1:1292014-1292033 | Msa0186590:CDS | 20.0% |
| !! | CTATTATTATTTACTGCTTT+AGG | - | chr2_1:1292060-1292079 | Msa0186590:intron | 20.0% |
| !! | AAAGAAAATGGTAAGAATTA+TGG | - | chr2_1:1292571-1292590 | Msa0186590:intron | 20.0% |
| !! | GATATATAAAAGGTAGAAAA+AGG | + | chr2_1:1292612-1292631 | None:intergenic | 20.0% |
| !! | AATGGAATAAAATTTCTTTC+AGG | - | chr2_1:1292756-1292775 | Msa0186590:intron | 20.0% |
| !! | GAAAGTTGTTATAAAAACAT+TGG | - | chr2_1:1292891-1292910 | Msa0186590:CDS | 20.0% |
| !! | AAGTTAACAAGTTAACAATA+AGG | + | chr2_1:1293000-1293019 | None:intergenic | 20.0% |
| !! | ATTGAATGAATTTGAGTTAG+TGG | + | chr2_1:1287484-1287503 | None:intergenic | 25.0% |
| !!! | ATGGAAGTAAAAGTACTTAT+CGG | + | chr2_1:1287710-1287729 | None:intergenic | 25.0% |
| ! | TAAACACTAATGAGATTGTT+TGG | - | chr2_1:1287815-1287834 | Msa0186590:CDS | 25.0% |
| !! | TTTTGAATTCATCTGATTCA+GGG | - | chr2_1:1287933-1287952 | Msa0186590:intron | 25.0% |
| ! | AAGAGTTTATGAAAATAAGC+CGG | + | chr2_1:1288051-1288070 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | - | chr2_1:1288163-1288182 | Msa0186590:CDS | 25.0% |
| !! | TTTCATTTTACAGGATAGTT+TGG | - | chr2_1:1288199-1288218 | Msa0186590:CDS | 25.0% |
| !! | TGTATCATTGAACACATTTT+CGG | - | chr2_1:1288274-1288293 | Msa0186590:intron | 25.0% |
| ! | TCATCAAAGATGATTTGAAT+TGG | - | chr2_1:1288683-1288702 | Msa0186590:intron | 25.0% |
| ! | AACTTATGTATGATTGTTCT+TGG | - | chr2_1:1288733-1288752 | Msa0186590:intron | 25.0% |
| !!! | TTATTATCATTTTTTGGGCA+CGG | - | chr2_1:1288883-1288902 | Msa0186590:intron | 25.0% |
| ! | AGAAATTCTAATGTTCAATC+AGG | + | chr2_1:1289184-1289203 | None:intergenic | 25.0% |
| !! | CAACTTTGAAAAAATGTGTT+TGG | - | chr2_1:1289332-1289351 | Msa0186590:intron | 25.0% |
| !!! | TCAAAACTATTCAGGTTTTA+TGG | + | chr2_1:1289388-1289407 | None:intergenic | 25.0% |
| ! | TCTTATGTAACAACATATCA+AGG | - | chr2_1:1289416-1289435 | Msa0186590:intron | 25.0% |
| ! | AAAAACAGAATCAGATTCAT+GGG | + | chr2_1:1289572-1289591 | None:intergenic | 25.0% |
| ! | TAAAAACAGAATCAGATTCA+TGG | + | chr2_1:1289573-1289592 | None:intergenic | 25.0% |
| !!! | AAAAAGGATATTGTTTTGGA+TGG | - | chr2_1:1290464-1290483 | Msa0186590:CDS | 25.0% |
| ! | ATTGTACTCACAAAACATTT+AGG | - | chr2_1:1290560-1290579 | Msa0186590:CDS | 25.0% |
| ! | AATGAATCTAAACAAACCTA+TGG | + | chr2_1:1290966-1290985 | None:intergenic | 25.0% |
| ! | GATTAACAATAGTCCAATTA+AGG | + | chr2_1:1291467-1291486 | None:intergenic | 25.0% |
| !!! | TTGATTTTGTTTTCTTTTCC+TGG | - | chr2_1:1291518-1291537 | Msa0186590:intron | 25.0% |
| !! | TAATTATTTCTTAAGGGGAA+TGG | - | chr2_1:1291787-1291806 | Msa0186590:CDS | 25.0% |
| ! | TGGTATTCATAATTATTTCC+TGG | - | chr2_1:1291852-1291871 | Msa0186590:intron | 25.0% |
| ! | TTAACAAATAGTTGTCACAT+AGG | - | chr2_1:1292321-1292340 | Msa0186590:intron | 25.0% |
| ! | TAACAAATAGTTGTCACATA+GGG | - | chr2_1:1292322-1292341 | Msa0186590:intron | 25.0% |
| !! | ACAAATTATAGGGTTTGTTT+GGG | + | chr2_1:1292510-1292529 | None:intergenic | 25.0% |
| !! | ATTCTTACCATTTTCTTTGT+TGG | + | chr2_1:1292569-1292588 | None:intergenic | 25.0% |
| ! | CTTCAGACATGATATATAAA+AGG | + | chr2_1:1292622-1292641 | None:intergenic | 25.0% |
| ! | GATCACAGTATATATAAGAA+TGG | - | chr2_1:1292738-1292757 | Msa0186590:CDS | 25.0% |
| ! | TATTCAACAGAGAAATGAAT+TGG | + | chr2_1:1292795-1292814 | None:intergenic | 25.0% |
| ! | AAATGATTGACGATTCATTT+GGG | + | chr2_1:1292842-1292861 | None:intergenic | 25.0% |
| ! | TAAATGATTGACGATTCATT+TGG | + | chr2_1:1292843-1292862 | None:intergenic | 25.0% |
| AGATGTTGAAATGTGAAAGA+AGG | + | chr2_1:1287316-1287335 | None:intergenic | 30.0% | |
| ! | CATCTTTTATCTCCTTTCTT+CGG | - | chr2_1:1287331-1287350 | Msa0186590:three_prime_UTR | 30.0% |
| ATAGAACAGAACAATAGCAT+GGG | - | chr2_1:1287355-1287374 | Msa0186590:three_prime_UTR | 30.0% | |
| !!! | TTCTTTTCTTTTTTGAAGGC+TGG | - | chr2_1:1287531-1287550 | Msa0186590:three_prime_UTR | 30.0% |
| TGTGATTGTTTCGTTAAGTT+TGG | + | chr2_1:1287644-1287663 | None:intergenic | 30.0% | |
| ! | TACTTTTACTTCCATAACAC+TGG | - | chr2_1:1287715-1287734 | Msa0186590:intron | 30.0% |
| !! | GTTTTGAATTCATCTGATTC+AGG | - | chr2_1:1287932-1287951 | Msa0186590:intron | 30.0% |
| CTCAAACAGTTTCACTAAAT+GGG | + | chr2_1:1287981-1288000 | None:intergenic | 30.0% | |
| TCTCAAACAGTTTCACTAAA+TGG | + | chr2_1:1287982-1288001 | None:intergenic | 30.0% | |
| GAAATGTCATAACTCATAAG+CGG | + | chr2_1:1288017-1288036 | None:intergenic | 30.0% | |
| AAGATAACTTAGAACCTGTT+TGG | + | chr2_1:1288180-1288199 | None:intergenic | 30.0% | |
| ! | ATTTTACAGGATAGTTTGGA+GGG | - | chr2_1:1288203-1288222 | Msa0186590:CDS | 30.0% |
| !!! | CCTGTTTTAATTTCTAGCAA+AGG | + | chr2_1:1288433-1288452 | None:intergenic | 30.0% |
| CCTTTGCTAGAAATTAAAAC+AGG | - | chr2_1:1288430-1288449 | Msa0186590:intron | 30.0% | |
| ! | TTAAATTTTCCTCCATTAGC+TGG | - | chr2_1:1288496-1288515 | Msa0186590:intron | 30.0% |
| GAAAACCCTAAATATTCGTT+TGG | - | chr2_1:1288941-1288960 | Msa0186590:intron | 30.0% | |
| TTCCTCCAAACGAATATTTA+GGG | + | chr2_1:1288949-1288968 | None:intergenic | 30.0% | |
| ATTCCTCCAAACGAATATTT+AGG | + | chr2_1:1288950-1288969 | None:intergenic | 30.0% | |
| ATCATCAAATACATTGACGT+TGG | + | chr2_1:1289104-1289123 | None:intergenic | 30.0% | |
| !! | TAATAACCAAAGTGCTGAAA+TGG | + | chr2_1:1289269-1289288 | None:intergenic | 30.0% |
| !!! | TAAGTGACCGAGTTTTTTTT+AGG | - | chr2_1:1289287-1289306 | Msa0186590:intron | 30.0% |
| TCACTTGCCTAAAAAAAACT+CGG | + | chr2_1:1289297-1289316 | None:intergenic | 30.0% | |
| CTTTAGTACATCTAATTCCA+CGG | - | chr2_1:1289461-1289480 | Msa0186590:intron | 30.0% | |
| AATAAGTTTGACAAAAGGGA+GGG | + | chr2_1:1289717-1289736 | None:intergenic | 30.0% | |
| !!! | ACTCGGACTAGTTTATATTT+TGG | + | chr2_1:1289815-1289834 | None:intergenic | 30.0% |
| TCAAGTAACTTACTATCAGT+TGG | + | chr2_1:1289925-1289944 | None:intergenic | 30.0% | |
| CAAGTAAGAGACTTAAAATC+AGG | - | chr2_1:1289965-1289984 | Msa0186590:intron | 30.0% | |
| ! | CAGTTTATGATATTTCTGCA+CGG | - | chr2_1:1290023-1290042 | Msa0186590:intron | 30.0% |
| CAAATACTGGAATTCAAAAC+AGG | + | chr2_1:1290247-1290266 | None:intergenic | 30.0% | |
| !! | CTGTTTTGAATTCCAGTATT+TGG | - | chr2_1:1290245-1290264 | Msa0186590:CDS | 30.0% |
| ! | ATGTGGAAAGCACATAAAAA+AGG | + | chr2_1:1290388-1290407 | None:intergenic | 30.0% |
| ! | TTTTCGCAACAATGAACATT+GGG | + | chr2_1:1290448-1290467 | None:intergenic | 30.0% |
| ! | TTTTTCGCAACAATGAACAT+TGG | + | chr2_1:1290449-1290468 | None:intergenic | 30.0% |
| AATGTTCATTGTTGCGAAAA+AGG | - | chr2_1:1290448-1290467 | Msa0186590:CDS | 30.0% | |
| ! | TGCGAAAAAGGATATTGTTT+TGG | - | chr2_1:1290460-1290479 | Msa0186590:CDS | 30.0% |
| !!! | GCAATTCTGTTTTTTAGCAA+GGG | + | chr2_1:1290654-1290673 | None:intergenic | 30.0% |
| !!! | AGCAATTCTGTTTTTTAGCA+AGG | + | chr2_1:1290655-1290674 | None:intergenic | 30.0% |
| !!! | TGCTTTGTTTTTCCATTTCT+AGG | - | chr2_1:1290806-1290825 | Msa0186590:intron | 30.0% |
| TAAATAGAGAGCTGTTGAAT+GGG | + | chr2_1:1290840-1290859 | None:intergenic | 30.0% | |
| ATAAATAGAGAGCTGTTGAA+TGG | + | chr2_1:1290841-1290860 | None:intergenic | 30.0% | |
| ACAAACCTATGGTAAATTTG+TGG | + | chr2_1:1290955-1290974 | None:intergenic | 30.0% | |
| CATTTCTTTAAACAAGCTAC+TGG | + | chr2_1:1290993-1291012 | None:intergenic | 30.0% | |
| CTGATTCTTAATTGTTACTC+AGG | - | chr2_1:1291020-1291039 | Msa0186590:intron | 30.0% | |
| !! | TAATCAAGTGAGTTTTATCC+TGG | - | chr2_1:1291099-1291118 | Msa0186590:intron | 30.0% |
| ! | TTATTAGTAAGTGCTGTTAG+TGG | - | chr2_1:1291211-1291230 | Msa0186590:intron | 30.0% |
| TAGATGCATAACAGAGAAAT+AGG | - | chr2_1:1291346-1291365 | Msa0186590:CDS | 30.0% | |
| ! | GAGATATGATTTTCACTTAC+TGG | + | chr2_1:1291392-1291411 | None:intergenic | 30.0% |
| TTAATCAAAGGTCCAACAAA+GGG | + | chr2_1:1291440-1291459 | None:intergenic | 30.0% | |
| ATTAATCAAAGGTCCAACAA+AGG | + | chr2_1:1291441-1291460 | None:intergenic | 30.0% | |
| TCAAAATGGACATGATATCA+TGG | + | chr2_1:1291502-1291521 | None:intergenic | 30.0% | |
| CTCAAAATACGAGGATAAAA+TGG | + | chr2_1:1291900-1291919 | None:intergenic | 30.0% | |
| ! | CATTTTATCCTCGTATTTTG+AGG | - | chr2_1:1291898-1291917 | Msa0186590:intron | 30.0% |
| ATCCAAACAATAAAAACCAC+AGG | + | chr2_1:1292008-1292027 | None:intergenic | 30.0% | |
| !!! | TTGTTTGGATATGTTTTGGT+AGG | - | chr2_1:1292018-1292037 | Msa0186590:CDS | 30.0% |
| AACAAATAGTTGTCACATAG+GGG | - | chr2_1:1292323-1292342 | Msa0186590:intron | 30.0% | |
| TAGAGAGAAGAAAAGGAAAA+GGG | + | chr2_1:1292418-1292437 | None:intergenic | 30.0% | |
| ATAGAGAGAAGAAAAGGAAA+AGG | + | chr2_1:1292419-1292438 | None:intergenic | 30.0% | |
| ! | CAAATTATAGGGTTTGTTTG+GGG | + | chr2_1:1292509-1292528 | None:intergenic | 30.0% |
| ! | GACAAATTATAGGGTTTGTT+TGG | + | chr2_1:1292511-1292530 | None:intergenic | 30.0% |
| AGTCAATGCGACAAATTATA+GGG | + | chr2_1:1292520-1292539 | None:intergenic | 30.0% | |
| ATGGTAAGAATTATGGTTTC+AGG | - | chr2_1:1292578-1292597 | Msa0186590:intron | 30.0% | |
| ! | CAAAAATGTTAGAAGCACAT+TGG | - | chr2_1:1292697-1292716 | Msa0186590:CDS | 30.0% |
| TATATATACTGTGATCGAGT+GGG | + | chr2_1:1292734-1292753 | None:intergenic | 30.0% | |
| TTATATATACTGTGATCGAG+TGG | + | chr2_1:1292735-1292754 | None:intergenic | 30.0% | |
| AAGCATTCCGGAATATTTAA+AGG | - | chr2_1:1292957-1292976 | Msa0186590:five_prime_UTR | 30.0% | |
| AGCATTCCGGAATATTTAAA+GGG | - | chr2_1:1292958-1292977 | Msa0186590:five_prime_UTR | 30.0% | |
| CATAGAACAGAACAATAGCA+TGG | - | chr2_1:1287354-1287373 | Msa0186590:three_prime_UTR | 35.0% | |
| ATATTGCAGAGGTTCGTTTA+GGG | + | chr2_1:1287383-1287402 | None:intergenic | 35.0% | |
| ACAGGTTCAATTGACGAATT+CGG | - | chr2_1:1287594-1287613 | Msa0186590:CDS | 35.0% | |
| !! | TACTTATCGGCTCTTCTAAA+AGG | + | chr2_1:1287697-1287716 | None:intergenic | 35.0% |
| GCTTTCACTTTCACATCATT+TGG | - | chr2_1:1287773-1287792 | Msa0186590:CDS | 35.0% | |
| !! | GTTTGGTTTGAGAGAACTTA+TGG | - | chr2_1:1287832-1287851 | Msa0186590:intron | 35.0% |
| GCTCAATATGTCTATCCAAA+AGG | + | chr2_1:1287959-1287978 | None:intergenic | 35.0% | |
| ! | GACATTTCATATGTTGCTTC+CGG | - | chr2_1:1288029-1288048 | Msa0186590:intron | 35.0% |
| ! | CATTTTACAGGATAGTTTGG+AGG | - | chr2_1:1288202-1288221 | Msa0186590:CDS | 35.0% |
| !! | TATAAAAGTGTTGCGTATCG+AGG | - | chr2_1:1288358-1288377 | Msa0186590:intron | 35.0% |
| TGAGCCTGATACTTTATCAT+GGG | - | chr2_1:1288391-1288410 | Msa0186590:intron | 35.0% | |
| ATTGCAAAACATGCACTTTC+CGG | + | chr2_1:1288598-1288617 | None:intergenic | 35.0% | |
| TGTATGATTGTTCTTGGTAC+TGG | - | chr2_1:1288739-1288758 | Msa0186590:intron | 35.0% | |
| !! | CTGCTTTTATACTGTAGAGA+TGG | - | chr2_1:1288809-1288828 | Msa0186590:intron | 35.0% |
| ! | AATCAGGAGATATTTTGTGC+TGG | - | chr2_1:1288909-1288928 | Msa0186590:intron | 35.0% |
| AACCCTAAATATTCGTTTGG+AGG | - | chr2_1:1288944-1288963 | Msa0186590:intron | 35.0% | |
| GAGGAATTGTTACTGATGAT+GGG | - | chr2_1:1288963-1288982 | Msa0186590:intron | 35.0% | |
| !! | AATTGTTACTGATGATGGGA+AGG | - | chr2_1:1288967-1288986 | Msa0186590:intron | 35.0% |
| TGCCTCCTAGAAAACAAATA+CGG | + | chr2_1:1289147-1289166 | None:intergenic | 35.0% | |
| TCTTGCTTAGTAATCTCCTA+TGG | - | chr2_1:1289201-1289220 | Msa0186590:intron | 35.0% | |
| CTTGCTTAGTAATCTCCTAT+GGG | - | chr2_1:1289202-1289221 | Msa0186590:intron | 35.0% | |
| TAACTTCCATTTCAGCACTT+TGG | - | chr2_1:1289260-1289279 | Msa0186590:intron | 35.0% | |
| TATGGCAACACTTCAAGAAA+GGG | + | chr2_1:1289370-1289389 | None:intergenic | 35.0% | |
| TTATGGCAACACTTCAAGAA+AGG | + | chr2_1:1289371-1289390 | None:intergenic | 35.0% | |
| TGTGATGAATATATCTTCCG+TGG | + | chr2_1:1289481-1289500 | None:intergenic | 35.0% | |
| TACATAACAGTGAGTTGCAA+AGG | + | chr2_1:1289524-1289543 | None:intergenic | 35.0% | |
| !! | CAGTAGTACAGTTTGTTAAC+TGG | + | chr2_1:1289641-1289660 | None:intergenic | 35.0% |
| ATAAGTTTGACAAAAGGGAG+GGG | + | chr2_1:1289716-1289735 | None:intergenic | 35.0% | |
| CAATAAGTTTGACAAAAGGG+AGG | + | chr2_1:1289718-1289737 | None:intergenic | 35.0% | |
| TAAACTAGTCCGAGTAGATT+TGG | - | chr2_1:1289820-1289839 | Msa0186590:CDS | 35.0% | |
| TTGGTTTCTCCAAATCTACT+CGG | + | chr2_1:1289832-1289851 | None:intergenic | 35.0% | |
| ATTTGGAGAAACCAAACACA+TGG | - | chr2_1:1289837-1289856 | Msa0186590:CDS | 35.0% | |
| TTTGGAGAAACCAAACACAT+GGG | - | chr2_1:1289838-1289857 | Msa0186590:CDS | 35.0% | |
| TAAACTGTGCCAATGTCAAT+TGG | + | chr2_1:1290010-1290029 | None:intergenic | 35.0% | |
| TCACGTAATATCTTCAGATC+AGG | + | chr2_1:1290133-1290152 | None:intergenic | 35.0% | |
| !! | TACCTGATTGACTTGAAACT+CGG | + | chr2_1:1290182-1290201 | None:intergenic | 35.0% |
| AAACAGGCAATTTAACAGTG+AGG | + | chr2_1:1290231-1290250 | None:intergenic | 35.0% | |
| ! | CCTGTTTTCATACCAAATAC+TGG | + | chr2_1:1290260-1290279 | None:intergenic | 35.0% |
| CCAGTATTTGGTATGAAAAC+AGG | - | chr2_1:1290257-1290276 | Msa0186590:CDS | 35.0% | |
| TTGAATTCCTTTAGTCTGCA+TGG | - | chr2_1:1290313-1290332 | Msa0186590:CDS | 35.0% | |
| TGAATTCCTTTAGTCTGCAT+GGG | - | chr2_1:1290314-1290333 | Msa0186590:CDS | 35.0% | |
| ! | TGTATCATTGTTGCTTGACT+TGG | - | chr2_1:1290362-1290381 | Msa0186590:CDS | 35.0% |
| TTATGTGCTTTCCACATTTC+AGG | - | chr2_1:1290391-1290410 | Msa0186590:CDS | 35.0% | |
| ATCTTGGTACCATCTTTACT+GGG | + | chr2_1:1290425-1290444 | None:intergenic | 35.0% | |
| AACAATGAACATTGGGATCT+TGG | + | chr2_1:1290441-1290460 | None:intergenic | 35.0% | |
| CATATCCATATAACAGACAC+GGG | + | chr2_1:1290496-1290515 | None:intergenic | 35.0% | |
| CCATATCCATATAACAGACA+CGG | + | chr2_1:1290497-1290516 | None:intergenic | 35.0% | |
| TGTCTGTTATATGGATATGG+TGG | - | chr2_1:1290497-1290516 | Msa0186590:CDS | 35.0% | |
| ! | TTTGATGACTTCATTTCTGC+TGG | - | chr2_1:1290674-1290693 | Msa0186590:CDS | 35.0% |
| TCTCTGTACAGATAAAGGAA+AGG | + | chr2_1:1290876-1290895 | None:intergenic | 35.0% | |
| ACAAAGAGGAAGAGTTTCAT+TGG | - | chr2_1:1291075-1291094 | Msa0186590:intron | 35.0% | |
| TATCCTGGCCTGAAATATTA+AGG | - | chr2_1:1291114-1291133 | Msa0186590:intron | 35.0% | |
| TATCCTTAATATTTCAGGCC+AGG | + | chr2_1:1291120-1291139 | None:intergenic | 35.0% | |
| CATATGGGAATTGTTCAAAC+CGG | + | chr2_1:1291257-1291276 | None:intergenic | 35.0% | |
| GTTTGAACAATTCCCATATG+TGG | - | chr2_1:1291257-1291276 | Msa0186590:intron | 35.0% | |
| CTATTGTTAATCACCACCAT+TGG | - | chr2_1:1291475-1291494 | Msa0186590:intron | 35.0% | |
| TACAGAAGAGATAGTGTCAT+TGG | - | chr2_1:1291593-1291612 | Msa0186590:intron | 35.0% | |
| GTGGCGTAAGAAAATAACTT+TGG | + | chr2_1:1291620-1291639 | None:intergenic | 35.0% | |
| TATTTCTTAAGGGGAATGGT+TGG | - | chr2_1:1291791-1291810 | Msa0186590:CDS | 35.0% | |
| TTATTTCCTGGCATAAGTTG+AGG | - | chr2_1:1291864-1291883 | Msa0186590:intron | 35.0% | |
| AAACATGGTTGAGAAACAAC+AGG | + | chr2_1:1291960-1291979 | None:intergenic | 35.0% | |
| GCAATCTGTCTTTCAAAACA+TGG | + | chr2_1:1291975-1291994 | None:intergenic | 35.0% | |
| ! | CTCCTGTGGTTTTTATTGTT+TGG | - | chr2_1:1292003-1292022 | Msa0186590:CDS | 35.0% |
| AATAGCTTCAATGAGTGTAG+TGG | + | chr2_1:1292194-1292213 | None:intergenic | 35.0% | |
| ACTACACTCATTGAAGCTAT+TGG | - | chr2_1:1292193-1292212 | Msa0186590:intron | 35.0% | |
| GTTGCAAGTAACAGAATAAG+TGG | - | chr2_1:1292282-1292301 | Msa0186590:intron | 35.0% | |
| ACAAATAGTTGTCACATAGG+GGG | - | chr2_1:1292324-1292343 | Msa0186590:intron | 35.0% | |
| AGAGAGATAGAGAGAAGAAA+AGG | + | chr2_1:1292425-1292444 | None:intergenic | 35.0% | |
| CAGTCAATGCGACAAATTAT+AGG | + | chr2_1:1292521-1292540 | None:intergenic | 35.0% | |
| AAATTTCTTTCAGGCAATGC+CGG | - | chr2_1:1292765-1292784 | Msa0186590:intron | 35.0% | |
| !! | AGAGAAATGAATTGGTTTGC+CGG | + | chr2_1:1292787-1292806 | None:intergenic | 35.0% |
| ATTGACGATTCATTTGGGTA+TGG | + | chr2_1:1292837-1292856 | None:intergenic | 35.0% | |
| TGGTACTTCAGAAATTGATG+CGG | - | chr2_1:1292911-1292930 | Msa0186590:CDS | 35.0% | |
| AAATATTCCGGAATGCTTAC+AGG | + | chr2_1:1292955-1292974 | None:intergenic | 35.0% | |
| GCATGACCCTTTAAATATTC+CGG | + | chr2_1:1292967-1292986 | None:intergenic | 35.0% | |
| TTCTGTTCTATGCCGAAGAA+AGG | + | chr2_1:1287346-1287365 | None:intergenic | 40.0% | |
| GATATTGCAGAGGTTCGTTT+AGG | + | chr2_1:1287384-1287403 | None:intergenic | 40.0% | |
| TCTGTCATTGACGATTACCA+TGG | - | chr2_1:1287424-1287443 | Msa0186590:three_prime_UTR | 40.0% | |
| TTGTTACCATCGATAAGGGT+CGG | + | chr2_1:1287461-1287480 | None:intergenic | 40.0% | |
| GTGGTTGTTACCATCGATAA+GGG | + | chr2_1:1287465-1287484 | None:intergenic | 40.0% | |
| AGTGGTTGTTACCATCGATA+AGG | + | chr2_1:1287466-1287485 | None:intergenic | 40.0% | |
| CTGATGCTGAAGAAGTGAAA+GGG | - | chr2_1:1287560-1287579 | Msa0186590:three_prime_UTR | 40.0% | |
| !! | GAAAGGGTTTGTTGAGAAAC+AGG | - | chr2_1:1287576-1287595 | Msa0186590:exon | 40.0% |
| !! | CTAAAAGGAGCATCATAACG+AGG | + | chr2_1:1287682-1287701 | None:intergenic | 40.0% |
| TGTGAAAGTGAAAGCAAACC+TGG | + | chr2_1:1287768-1287787 | None:intergenic | 40.0% | |
| AAACTGTTTGAGAGAGCTTC+TGG | - | chr2_1:1287989-1288008 | Msa0186590:intron | 40.0% | |
| ! | CATCTTCACTCAAGGCATTT+GGG | + | chr2_1:1288250-1288269 | None:intergenic | 40.0% |
| TACAGTTCCATCTTCACTCA+AGG | + | chr2_1:1288258-1288277 | None:intergenic | 40.0% | |
| ! | TTAGTTCCAGTGGTAGTGAT+TGG | - | chr2_1:1288330-1288349 | Msa0186590:intron | 40.0% |
| ! | TAGTTCCAGTGGTAGTGATT+GGG | - | chr2_1:1288331-1288350 | Msa0186590:intron | 40.0% |
| CTGAGCCTGATACTTTATCA+TGG | - | chr2_1:1288390-1288409 | Msa0186590:intron | 40.0% | |
| ! | CTCACCCATGATAAAGTATC+AGG | + | chr2_1:1288398-1288417 | None:intergenic | 40.0% |
| !! | TAATTTCTAGCAAAGGCACG+AGG | + | chr2_1:1288426-1288445 | None:intergenic | 40.0% |
| GTTATCATGTGTCCAGCTAA+TGG | + | chr2_1:1288511-1288530 | None:intergenic | 40.0% | |
| AGCTGGACACATGATAACAA+AGG | - | chr2_1:1288513-1288532 | Msa0186590:intron | 40.0% | |
| GCAAAGGACATCACTTACTT+GGG | + | chr2_1:1288564-1288583 | None:intergenic | 40.0% | |
| AGCAAAGGACATCACTTACT+TGG | + | chr2_1:1288565-1288584 | None:intergenic | 40.0% | |
| TCCTTTGCTCACATTCTTTC+CGG | - | chr2_1:1288576-1288595 | Msa0186590:intron | 40.0% | |
| !! | TGATTGTTCTTGGTACTGGT+AGG | - | chr2_1:1288743-1288762 | Msa0186590:intron | 40.0% |
| ATACTGTAGAGATGGAGAAG+TGG | - | chr2_1:1288817-1288836 | Msa0186590:intron | 40.0% | |
| GGAGGAATTGTTACTGATGA+TGG | - | chr2_1:1288962-1288981 | Msa0186590:intron | 40.0% | |
| TAGAAAACAAATACGGGGCA+GGG | + | chr2_1:1289140-1289159 | None:intergenic | 40.0% | |
| CCTCCTAGAAAACAAATACG+GGG | + | chr2_1:1289145-1289164 | None:intergenic | 40.0% | |
| GCCTCCTAGAAAACAAATAC+GGG | + | chr2_1:1289146-1289165 | None:intergenic | 40.0% | |
| AGTTTCTCTACTGATCCCAT+AGG | + | chr2_1:1289220-1289239 | None:intergenic | 40.0% | |
| TCCTCCTCTATATTAGCGAA+GGG | - | chr2_1:1289609-1289628 | Msa0186590:CDS | 40.0% | |
| AGTACATCTTTGTCAGACTC+TGG | + | chr2_1:1289875-1289894 | None:intergenic | 40.0% | |
| GTTACCATTTACAGCACATG+CGG | + | chr2_1:1289903-1289922 | None:intergenic | 40.0% | |
| ! | AATTGGCAGTTGATGCAACA+AGG | + | chr2_1:1289993-1290012 | None:intergenic | 40.0% |
| CATCAACTGCCAATTGACAT+TGG | - | chr2_1:1289998-1290017 | Msa0186590:intron | 40.0% | |
| TTTACAAGCTTTCTGTCTCC+CGG | - | chr2_1:1290073-1290092 | Msa0186590:intron | 40.0% | |
| ! | GTTTTTGTCCCCAGTAAAGA+TGG | - | chr2_1:1290413-1290432 | Msa0186590:CDS | 40.0% |
| TCTTGGTACCATCTTTACTG+GGG | + | chr2_1:1290424-1290443 | None:intergenic | 40.0% | |
| GATCTTGGTACCATCTTTAC+TGG | + | chr2_1:1290426-1290445 | None:intergenic | 40.0% | |
| CCGTGTCTGTTATATGGATA+TGG | - | chr2_1:1290494-1290513 | Msa0186590:CDS | 40.0% | |
| TACAATGCGACTAACACTGA+AGG | + | chr2_1:1290546-1290565 | None:intergenic | 40.0% | |
| TACTGCATTGCGAATATTCG+TGG | - | chr2_1:1290590-1290609 | Msa0186590:CDS | 40.0% | |
| GATGCATAACTTTCTGGGTT+GGG | + | chr2_1:1290726-1290745 | None:intergenic | 40.0% | |
| CCTTCGATGCATAACTTTCT+GGG | + | chr2_1:1290731-1290750 | None:intergenic | 40.0% | |
| ACCTTCGATGCATAACTTTC+TGG | + | chr2_1:1290732-1290751 | None:intergenic | 40.0% | |
| AGAAAGTTATGCATCGAAGG+TGG | - | chr2_1:1290731-1290750 | Msa0186590:intron | 40.0% | |
| ! | TGTTGGTGCTTGCATAAATC+AGG | - | chr2_1:1290772-1290791 | Msa0186590:intron | 40.0% |
| TCAGGTCTCTGTACAGATAA+AGG | + | chr2_1:1290881-1290900 | None:intergenic | 40.0% | |
| CGGTTCCACAAATTTACCAT+AGG | - | chr2_1:1290947-1290966 | Msa0186590:intron | 40.0% | |
| ATTGTTACTCAGGTCATGCT+TGG | - | chr2_1:1291030-1291049 | Msa0186590:intron | 40.0% | |
| TTATGGTTGTGCAGACAAAG+AGG | - | chr2_1:1291061-1291080 | Msa0186590:intron | 40.0% | |
| GAACAATTCCCATATGTGGA+TGG | - | chr2_1:1291261-1291280 | Msa0186590:intron | 40.0% | |
| ! | CTTTTCGTCCATCCACATAT+GGG | + | chr2_1:1291272-1291291 | None:intergenic | 40.0% |
| ATGATATCATGGACCAATGG+TGG | + | chr2_1:1291491-1291510 | None:intergenic | 40.0% | |
| GACATGATATCATGGACCAA+TGG | + | chr2_1:1291494-1291513 | None:intergenic | 40.0% | |
| ATGTGTAGCTTATGAACTCC+AGG | + | chr2_1:1291539-1291558 | None:intergenic | 40.0% | |
| TAAGCTACACATGCATGTTC+TGG | - | chr2_1:1291547-1291566 | Msa0186590:intron | 40.0% | |
| TGATAATTGTCATGCGACTG+TGG | + | chr2_1:1291639-1291658 | None:intergenic | 40.0% | |
| TCAGGTAAAGCATGAAAGAC+AGG | + | chr2_1:1291729-1291748 | None:intergenic | 40.0% | |
| TAACATCGAGATTCAGCTTC+AGG | + | chr2_1:1291747-1291766 | None:intergenic | 40.0% | |
| CAGATGAACCTCAAAATACG+AGG | + | chr2_1:1291909-1291928 | None:intergenic | 40.0% | |
| !!! | CTCGTATTTTGAGGTTCATC+TGG | - | chr2_1:1291907-1291926 | Msa0186590:CDS | 40.0% |
| GATTGCTTTATGAACTCCTG+TGG | - | chr2_1:1291989-1292008 | Msa0186590:CDS | 40.0% | |
| ACTCACCATTGCATAATGTC+CGG | - | chr2_1:1292084-1292103 | Msa0186590:intron | 40.0% | |
| !! | GGGTATTGAATTGACTTGTC+AGG | + | chr2_1:1292128-1292147 | None:intergenic | 40.0% |
| CCGTCAACAACATAGTTGAT+GGG | + | chr2_1:1292148-1292167 | None:intergenic | 40.0% | |
| CCCATCAACTATGTTGTTGA+CGG | - | chr2_1:1292145-1292164 | Msa0186590:intron | 40.0% | |
| ACACTCATTGAAGCTATTGG+CGG | - | chr2_1:1292196-1292215 | Msa0186590:intron | 40.0% | |
| CAAATAGTTGTCACATAGGG+GGG | - | chr2_1:1292325-1292344 | Msa0186590:intron | 40.0% | |
| AAATAGTTGTCACATAGGGG+GGG | - | chr2_1:1292326-1292345 | Msa0186590:intron | 40.0% | |
| AGAGAAGAAAAGGAAAAGGG+TGG | + | chr2_1:1292415-1292434 | None:intergenic | 40.0% | |
| ACTACATAGCACATACTGCA+TGG | + | chr2_1:1292471-1292490 | None:intergenic | 40.0% | |
| GTATGTGCTATGTAGTAGCT+TGG | - | chr2_1:1292475-1292494 | Msa0186590:intron | 40.0% | |
| AGATCGATGAAACTGCTGAT+CGG | - | chr2_1:1292661-1292680 | Msa0186590:CDS | 40.0% | |
| ! | TGCTGATCGGTACAGTTTTA+TGG | - | chr2_1:1292674-1292693 | Msa0186590:CDS | 40.0% |
| TTCATTTGGGTATGGTAGCA+TGG | + | chr2_1:1292829-1292848 | None:intergenic | 40.0% | |
| TTACTTGCCTGTAAGCATTC+CGG | - | chr2_1:1292945-1292964 | Msa0186590:five_prime_UTR | 40.0% | |
| CCTTTCACTTCTTCAGCATC+AGG | + | chr2_1:1287562-1287581 | None:intergenic | 45.0% | |
| CCTGATGCTGAAGAAGTGAA+AGG | - | chr2_1:1287559-1287578 | Msa0186590:three_prime_UTR | 45.0% | |
| AGAGAATGTCCTGTGCTTGA+AGG | + | chr2_1:1287741-1287760 | None:intergenic | 45.0% | |
| ACAGGACATTCTCTATGTCC+AGG | - | chr2_1:1287747-1287766 | Msa0186590:CDS | 45.0% | |
| ! | TCATCTGATTCAGGGCCTTT+TGG | - | chr2_1:1287941-1287960 | Msa0186590:intron | 45.0% |
| TTTGGGTCAAGCAAAACCTG+TGG | + | chr2_1:1288233-1288252 | None:intergenic | 45.0% | |
| ! | CCATCTTCACTCAAGGCATT+TGG | + | chr2_1:1288251-1288270 | None:intergenic | 45.0% |
| CCAAATGCCTTGAGTGAAGA+TGG | - | chr2_1:1288248-1288267 | Msa0186590:intron | 45.0% | |
| GAGTGAAGATGCCAAGTACT+TGG | - | chr2_1:1288298-1288317 | Msa0186590:intron | 45.0% | |
| AAGCGCATAAGCCAAGTACT+TGG | + | chr2_1:1288312-1288331 | None:intergenic | 45.0% | |
| ATCATGTGTCCAGCTAATGG+AGG | + | chr2_1:1288508-1288527 | None:intergenic | 45.0% | |
| TCCGGAAAGAATGTGAGCAA+AGG | + | chr2_1:1288580-1288599 | None:intergenic | 45.0% | |
| ATGGAGAAGTGGTAGATGCT+GGG | - | chr2_1:1288828-1288847 | Msa0186590:intron | 45.0% | |
| !! | TTTTTGGGCACGGATCAATC+AGG | - | chr2_1:1288893-1288912 | Msa0186590:intron | 45.0% |
| CTAGAAAACAAATACGGGGC+AGG | + | chr2_1:1289141-1289160 | None:intergenic | 45.0% | |
| !! | CTGCCCCGTATTTGTTTTCT+AGG | - | chr2_1:1289139-1289158 | Msa0186590:intron | 45.0% |
| !! | CCCCGTATTTGTTTTCTAGG+AGG | - | chr2_1:1289142-1289161 | Msa0186590:intron | 45.0% |
| CTCCTCCTCTATATTAGCGA+AGG | - | chr2_1:1289608-1289627 | Msa0186590:CDS | 45.0% | |
| ACCCTTCGCTAATATAGAGG+AGG | + | chr2_1:1289613-1289632 | None:intergenic | 45.0% | |
| CACACCCTTCGCTAATATAG+AGG | + | chr2_1:1289616-1289635 | None:intergenic | 45.0% | |
| AGAACATCAGCCCATGTGTT+TGG | + | chr2_1:1289851-1289870 | None:intergenic | 45.0% | |
| ! | TTGCACTGATAGACGATACC+GGG | + | chr2_1:1290094-1290113 | None:intergenic | 45.0% |
| ! | GTTGCACTGATAGACGATAC+CGG | + | chr2_1:1290095-1290114 | None:intergenic | 45.0% |
| TATCGTCTATCAGTGCAACC+TGG | - | chr2_1:1290096-1290115 | Msa0186590:intron | 45.0% | |
| ATCGTCTATCAGTGCAACCT+GGG | - | chr2_1:1290097-1290116 | Msa0186590:intron | 45.0% | |
| TTACGTGAAATTGCAGTCCC+TGG | - | chr2_1:1290145-1290164 | Msa0186590:CDS | 45.0% | |
| TACGTGAAATTGCAGTCCCT+GGG | - | chr2_1:1290146-1290165 | Msa0186590:CDS | 45.0% | |
| ! | CTCCGAGTTTCAAGTCAATC+AGG | - | chr2_1:1290177-1290196 | Msa0186590:CDS | 45.0% |
| GGGGACAAAAACCTGAAATG+TGG | + | chr2_1:1290405-1290424 | None:intergenic | 45.0% | |
| TCACACCCGTGTCTGTTATA+TGG | - | chr2_1:1290488-1290507 | Msa0186590:CDS | 45.0% | |
| ATGCGACTAACACTGAAGGA+TGG | + | chr2_1:1290542-1290561 | None:intergenic | 45.0% | |
| TGCATTGCGAATATTCGTGG+TGG | - | chr2_1:1290593-1290612 | Msa0186590:CDS | 45.0% | |
| ATTGCGAATATTCGTGGTGG+TGG | - | chr2_1:1290596-1290615 | Msa0186590:CDS | 45.0% | |
| !! | ATTCGTGGTGGTGGAGAATA+TGG | - | chr2_1:1290605-1290624 | Msa0186590:CDS | 45.0% |
| !! | TTCGTGGTGGTGGAGAATAT+GGG | - | chr2_1:1290606-1290625 | Msa0186590:CDS | 45.0% |
| GTGGAGAATATGGGGAAGAA+TGG | - | chr2_1:1290615-1290634 | Msa0186590:CDS | 45.0% | |
| TGGTGAATACCTTGTGTCCA+CGG | - | chr2_1:1290694-1290713 | Msa0186590:intron | 45.0% | |
| CGATGCATAACTTTCTGGGT+TGG | + | chr2_1:1290727-1290746 | None:intergenic | 45.0% | |
| CCCAGAAAGTTATGCATCGA+AGG | - | chr2_1:1290728-1290747 | Msa0186590:intron | 45.0% | |
| !! | AGCAATGGTGGACTTCTTGT+TGG | - | chr2_1:1290755-1290774 | Msa0186590:intron | 45.0% |
| GTGCTTGCATAAATCAGGTC+TGG | - | chr2_1:1290777-1290796 | Msa0186590:intron | 45.0% | |
| ! | ATTGGCTCATGTTGGCGTTA+TGG | - | chr2_1:1290916-1290935 | Msa0186590:intron | 45.0% |
| TTGGCGTTATGGACATGCTA+CGG | - | chr2_1:1290927-1290946 | Msa0186590:intron | 45.0% | |
| CATGCTTGGACCTCAGATTA+TGG | - | chr2_1:1291044-1291063 | Msa0186590:intron | 45.0% | |
| GTCTGCACAACCATAATCTG+AGG | + | chr2_1:1291057-1291076 | None:intergenic | 45.0% | |
| ! | GTAAGTGCTGTTAGTGGAAG+CGG | - | chr2_1:1291217-1291236 | Msa0186590:intron | 45.0% |
| ! | TAAGTGCTGTTAGTGGAAGC+GGG | - | chr2_1:1291218-1291237 | Msa0186590:intron | 45.0% |
| TGTTAGTGGAAGCGGGATAA+TGG | - | chr2_1:1291225-1291244 | Msa0186590:intron | 45.0% | |
| ! | CCTTTTCGTCCATCCACATA+TGG | + | chr2_1:1291273-1291292 | None:intergenic | 45.0% |
| CCATATGTGGATGGACGAAA+AGG | - | chr2_1:1291270-1291289 | Msa0186590:intron | 45.0% | |
| CTGTGAGACAATCCCTTTGT+TGG | - | chr2_1:1291425-1291444 | Msa0186590:CDS | 45.0% | |
| TCTTAAGGGGAATGGTTGGT+TGG | - | chr2_1:1291795-1291814 | Msa0186590:CDS | 45.0% | |
| TTCTAGCAGCATAGACTGCA+TGG | - | chr2_1:1291832-1291851 | Msa0186590:intron | 45.0% | |
| GAGAATCCTCAACTTATGCC+AGG | + | chr2_1:1291873-1291892 | None:intergenic | 45.0% | |
| GCCGTCAACAACATAGTTGA+TGG | + | chr2_1:1292149-1292168 | None:intergenic | 45.0% | |
| TTGAAGCTATTGGCGGTTAG+TGG | - | chr2_1:1292203-1292222 | Msa0186590:intron | 45.0% | |
| TGAAGCTATTGGCGGTTAGT+GGG | - | chr2_1:1292204-1292223 | Msa0186590:intron | 45.0% | |
| ! | ATGAGTTTTTCCTCCCACAG+TGG | + | chr2_1:1292374-1292393 | None:intergenic | 45.0% |
| ACTGCATGGTCTGCAACAAT+TGG | + | chr2_1:1292457-1292476 | None:intergenic | 45.0% | |
| ATTGACTGCAAAGCTGGACA+TGG | - | chr2_1:1292533-1292552 | Msa0186590:intron | 45.0% | |
| GGGTCGTCCAACAAAGAAAA+TGG | - | chr2_1:1292559-1292578 | Msa0186590:intron | 45.0% | |
| !!! | AAAATTTAAGTTAAATAAAT+TGG | + | chr2_1:1287893-1287912 | None:intergenic | 5.0% |
| AAATCGCCGACCCTTATCGA+TGG | - | chr2_1:1287452-1287471 | Msa0186590:three_prime_UTR | 50.0% | |
| GTGCTTGAAGGCCAGTGTTA+TGG | + | chr2_1:1287729-1287748 | None:intergenic | 50.0% | |
| !! | TAACACTGGCCTTCAAGCAC+AGG | - | chr2_1:1287729-1287748 | Msa0186590:intron | 50.0% |
| TAGTTTGGAGGGAGAACCAC+AGG | - | chr2_1:1288214-1288233 | Msa0186590:CDS | 50.0% | |
| GCTTATGCGCTTAGTTCCAG+TGG | - | chr2_1:1288320-1288339 | Msa0186590:intron | 50.0% | |
| !! | CTTACTTGGGTGCTGGATAG+CGG | + | chr2_1:1288551-1288570 | None:intergenic | 50.0% |
| GACATCACTTACTTGGGTGC+TGG | + | chr2_1:1288558-1288577 | None:intergenic | 50.0% | |
| GATGGAGAAGTGGTAGATGC+TGG | - | chr2_1:1288827-1288846 | Msa0186590:intron | 50.0% | |
| GAGTCCGCATGTGCTGTAAA+TGG | - | chr2_1:1289896-1289915 | Msa0186590:intron | 50.0% | |
| TGCACGGCGTGAAGATAATG+TGG | - | chr2_1:1290039-1290058 | Msa0186590:intron | 50.0% | |
| TATCAGTGCAACCTGGGAAC+AGG | - | chr2_1:1290103-1290122 | Msa0186590:intron | 50.0% | |
| ATCAGTGCAACCTGGGAACA+GGG | - | chr2_1:1290104-1290123 | Msa0186590:intron | 50.0% | |
| ACAGTGAGGACATGCAGCAT+CGG | + | chr2_1:1290217-1290236 | None:intergenic | 50.0% | |
| CCTGTACCCATGCAGACTAA+AGG | + | chr2_1:1290323-1290342 | None:intergenic | 50.0% | |
| CCTTTAGTCTGCATGGGTAC+AGG | - | chr2_1:1290320-1290339 | Msa0186590:CDS | 50.0% | |
| !! | TCGTGGTGGTGGAGAATATG+GGG | - | chr2_1:1290607-1290626 | Msa0186590:CDS | 50.0% |
| GGGGAAGAATGGCATAAAGC+AGG | - | chr2_1:1290626-1290645 | Msa0186590:CDS | 50.0% | |
| GGTGAATACCTTGTGTCCAC+GGG | - | chr2_1:1290695-1290714 | Msa0186590:intron | 50.0% | |
| TGCATCGAAGGTGGAAGCAA+TGG | - | chr2_1:1290740-1290759 | Msa0186590:intron | 50.0% | |
| ATCGAAGGTGGAAGCAATGG+TGG | - | chr2_1:1290743-1290762 | Msa0186590:intron | 50.0% | |
| ! | TGGGAAGTGTGGCCTAGAAA+TGG | + | chr2_1:1290821-1290840 | None:intergenic | 50.0% |
| GAGCTGTTGAATGGGAAGTG+TGG | + | chr2_1:1290832-1290851 | None:intergenic | 50.0% | |
| GTACAGAGACCTGAGCTCTT+TGG | - | chr2_1:1290887-1290906 | Msa0186590:intron | 50.0% | |
| AATGCACAGCCAAAGAGCTC+AGG | + | chr2_1:1290899-1290918 | None:intergenic | 50.0% | |
| TGAGCTCTTTGGCTGTGCAT+TGG | - | chr2_1:1290898-1290917 | Msa0186590:intron | 50.0% | |
| TTGTCAGGATGCTGTTCCCA+TGG | + | chr2_1:1292113-1292132 | None:intergenic | 50.0% | |
| TCATTCTCGTGTGACCACTG+TGG | - | chr2_1:1292357-1292376 | Msa0186590:intron | 50.0% | |
| CATTCTCGTGTGACCACTGT+GGG | - | chr2_1:1292358-1292377 | Msa0186590:intron | 50.0% | |
| !! | TGTCGCATTGACTGCAAAGC+TGG | - | chr2_1:1292527-1292546 | Msa0186590:intron | 50.0% |
| CGAACCTCTGCAATATCCCG+CGG | - | chr2_1:1287387-1287406 | Msa0186590:three_prime_UTR | 55.0% | |
| AGTCGCCCAATCACTACCAC+TGG | + | chr2_1:1288339-1288358 | None:intergenic | 55.0% | |
| ACTCGGAGCGATCAAACCCA+GGG | + | chr2_1:1290165-1290184 | None:intergenic | 55.0% | |
| AACTCGGAGCGATCAAACCC+AGG | + | chr2_1:1290166-1290185 | None:intergenic | 55.0% | |
| GGGTATAACCCGTGGACACA+AGG | + | chr2_1:1290706-1290725 | None:intergenic | 55.0% | |
| ! | TCTGGGTTGGGTATAACCCG+TGG | + | chr2_1:1290714-1290733 | None:intergenic | 55.0% |
| !! | GGCTGTGCATTGGCTCATGT+TGG | - | chr2_1:1290908-1290927 | Msa0186590:intron | 55.0% |
| ! | AGTGGAAGCGGGATAATGGC+AGG | - | chr2_1:1291229-1291248 | Msa0186590:intron | 55.0% |
| ! | GTGGAAGCGGGATAATGGCA+GGG | - | chr2_1:1291230-1291249 | Msa0186590:intron | 55.0% |
| GGTCGCCGGACATTATGCAA+TGG | + | chr2_1:1292092-1292111 | None:intergenic | 55.0% | |
| TGCATAATGTCCGGCGACCA+TGG | - | chr2_1:1292093-1292112 | Msa0186590:intron | 55.0% | |
| GCATAATGTCCGGCGACCAT+GGG | - | chr2_1:1292094-1292113 | Msa0186590:intron | 55.0% | |
| GTTGTCACATAGGGGGGGAT+AGG | - | chr2_1:1292331-1292350 | Msa0186590:intron | 55.0% | |
| GGGTGGTAAATTGCGACGAC+TGG | + | chr2_1:1292398-1292417 | None:intergenic | 55.0% | |
| CTGCAAAGCTGGACATGGAG+CGG | - | chr2_1:1292538-1292557 | Msa0186590:intron | 55.0% | |
| TGCAAAGCTGGACATGGAGC+GGG | - | chr2_1:1292539-1292558 | Msa0186590:intron | 55.0% | |
| !! | GGTCGGCGATTTTGACGCCA+TGG | + | chr2_1:1287444-1287463 | None:intergenic | 60.0% |
| GATCAGGAGTCCCTGTTCCC+AGG | + | chr2_1:1290117-1290136 | None:intergenic | 60.0% | |
| ! | AGCGGGATAATGGCAGGGTC+CGG | - | chr2_1:1291235-1291254 | Msa0186590:intron | 60.0% |
| GATGCTGTTCCCATGGTCGC+CGG | + | chr2_1:1292106-1292125 | None:intergenic | 60.0% | |
| TCTCGTGTGACCACTGTGGG+AGG | - | chr2_1:1292361-1292380 | Msa0186590:intron | 60.0% | |
| CGAGCCGCGGGATATTGCAG+AGG | + | chr2_1:1287394-1287413 | None:intergenic | 65.0% | |
| AGAGTCGTCTCTGCGAGCCG+CGG | + | chr2_1:1287407-1287426 | None:intergenic | 65.0% | |
| GAGTCGTCTCTGCGAGCCGC+GGG | + | chr2_1:1287406-1287425 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 1287264 | 1293053 | 1287264 | ID=Msa0186590;Name=Msa0186590 |
| chr2_1 | mRNA | 1287264 | 1293053 | 1287264 | ID=Msa0186590-mRNA-1;Parent=Msa0186590;Name=Msa0186590-mRNA-1;_AED=0.09;_eAED=0.09;_QI=109|0.90|0.83|1|1|1|12|325|681 |
| chr2_1 | exon | 1287264 | 1287654 | 1287264 | ID=Msa0186590-mRNA-1:exon:584;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1287737 | 1287850 | 1287737 | ID=Msa0186590-mRNA-1:exon:583;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1288100 | 1288235 | 1288100 | ID=Msa0186590-mRNA-1:exon:582;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1289212 | 1289275 | 1289212 | ID=Msa0186590-mRNA-1:exon:581;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1289349 | 1289424 | 1289349 | ID=Msa0186590-mRNA-1:exon:580;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1289524 | 1289904 | 1289524 | ID=Msa0186590-mRNA-1:exon:579;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1290119 | 1290712 | 1290119 | ID=Msa0186590-mRNA-1:exon:578;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1291329 | 1291491 | 1291329 | ID=Msa0186590-mRNA-1:exon:577;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1291752 | 1291822 | 1291752 | ID=Msa0186590-mRNA-1:exon:576;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1291905 | 1292050 | 1291905 | ID=Msa0186590-mRNA-1:exon:575;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1292635 | 1292768 | 1292635 | ID=Msa0186590-mRNA-1:exon:574;Parent=Msa0186590-mRNA-1 |
| chr2_1 | exon | 1292844 | 1293053 | 1292844 | ID=Msa0186590-mRNA-1:exon:573;Parent=Msa0186590-mRNA-1 |
| chr2_1 | five_prime_UTR | 1292945 | 1293053 | 1292945 | ID=Msa0186590-mRNA-1:five_prime_utr;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1292844 | 1292944 | 1292844 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1292635 | 1292768 | 1292635 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1291905 | 1292050 | 1291905 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1291752 | 1291822 | 1291752 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1291329 | 1291491 | 1291329 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1290119 | 1290712 | 1290119 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1289524 | 1289904 | 1289524 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1289349 | 1289424 | 1289349 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1289212 | 1289275 | 1289212 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1288100 | 1288235 | 1288100 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1287737 | 1287850 | 1287737 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | CDS | 1287589 | 1287654 | 1287589 | ID=Msa0186590-mRNA-1:cds;Parent=Msa0186590-mRNA-1 |
| chr2_1 | three_prime_UTR | 1287264 | 1287588 | 1287264 | ID=Msa0186590-mRNA-1:three_prime_utr;Parent=Msa0186590-mRNA-1 |
| Gene Sequence |
| Protein sequence |
