Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435600 | XP_013462243.1 | 91.209 | 728 | 17 | 1 | 1 | 681 | 1 | 728 | 0.0 | 1361 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435600 | sp|P48147|PPCE_HUMAN | 50.831 | 722 | 290 | 7 | 8 | 680 | 4 | 709 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435600 | A0A072V4K2 | 91.209 | 728 | 17 | 1 | 1 | 681 | 1 | 728 | 0.0 | 1361 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0186590 | Msa0435600 | 0.961157 | 2.234928e-119 | -8.615850e-47 |
| Msa0385710 | Msa0435600 | 0.994864 | 7.119230e-211 | -8.615850e-47 |
| Msa0435600 | Msa0479720 | 0.995195 | 6.607275e-214 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435600 | MtrunA17_Chr3g0143651 | 91.209 | 728 | 17 | 1 | 1 | 681 | 1 | 728 | 0.0 | 1361 |
| Msa0435600 | MtrunA17_Chr1g0157311 | 74.932 | 734 | 131 | 3 | 1 | 681 | 55 | 788 | 0.0 | 1123 |
| Msa0435600 | MtrunA17_Chr1g0157291 | 87.135 | 171 | 22 | 0 | 383 | 553 | 1 | 171 | 5.83e-108 | 324 |
| Msa0435600 | MtrunA17_Chr1g0157281 | 71.084 | 166 | 48 | 0 | 151 | 316 | 11 | 176 | 8.66e-77 | 243 |
| Msa0435600 | MtrunA17_Chr1g0157301 | 84.375 | 128 | 17 | 1 | 557 | 681 | 3 | 130 | 1.21e-72 | 231 |
| Msa0435600 | MtrunA17_Chr1g0212361 | 27.536 | 621 | 366 | 19 | 79 | 675 | 201 | 761 | 4.34e-52 | 192 |
| Msa0435600 | MtrunA17_Chr5g0420581 | 25.060 | 419 | 236 | 12 | 258 | 611 | 17 | 422 | 1.12e-23 | 104 |
| Msa0435600 | MtrunA17_Chr8g0374081 | 31.925 | 213 | 132 | 4 | 395 | 603 | 518 | 721 | 1.35e-21 | 100 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0435600 | AT1G76140.1 | 72.176 | 726 | 155 | 1 | 3 | 681 | 70 | 795 | 0.0 | 1108 |
| Msa0435600 | AT1G76140.2 | 71.901 | 726 | 154 | 2 | 3 | 681 | 70 | 792 | 0.0 | 1098 |
| Msa0435600 | AT1G20380.1 | 69.505 | 728 | 175 | 1 | 1 | 681 | 4 | 731 | 0.0 | 1062 |
| Msa0435600 | AT1G20380.2 | 74.692 | 569 | 144 | 0 | 113 | 681 | 1 | 569 | 0.0 | 909 |
| Msa0435600 | AT1G50380.1 | 25.241 | 622 | 381 | 17 | 79 | 676 | 143 | 704 | 1.99e-49 | 184 |
| Msa0435600 | AT1G50380.2 | 25.241 | 622 | 381 | 17 | 79 | 676 | 209 | 770 | 3.34e-49 | 184 |
| Msa0435600 | AT1G69020.1 | 27.899 | 276 | 182 | 4 | 406 | 678 | 493 | 754 | 6.68e-29 | 123 |
| Msa0435600 | AT1G69020.2 | 27.899 | 276 | 182 | 4 | 406 | 678 | 525 | 786 | 8.61e-29 | 123 |
| Msa0435600 | AT5G66960.1 | 29.596 | 223 | 144 | 4 | 406 | 625 | 536 | 748 | 3.21e-15 | 80.1 |
Find 182 sgRNAs with CRISPR-Local
Find 408 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCCTCCAAACGAATATTT+AGG | 0.117671 | 3_2:-88843458 | None:intergenic |
| ATTCGTGGTGGTGGAGAATA+TGG | 0.163223 | 3_2:+88845116 | Msa0435600:CDS |
| ACTCGGACTAGTTTATATTT+TGG | 0.203708 | 3_2:-88844323 | None:intergenic |
| ACCTTCGATGCATAACTTTC+TGG | 0.218698 | 3_2:-88845240 | None:intergenic |
| AATGGAATAAAATTTCTTTC+AGG | 0.241282 | 3_2:+88847269 | Msa0435600:three_prime_UTR |
| GATCTTGGTACCATCTTTAC+TGG | 0.241696 | 3_2:-88844934 | None:intergenic |
| AATGTTCATTGTTGCGAAAA+AGG | 0.252900 | 3_2:+88844959 | Msa0435600:CDS |
| AAGCATTCCGGAATATTTAA+AGG | 0.255157 | 3_2:+88847470 | Msa0435600:three_prime_UTR |
| AAATATTCCGGAATGCTTAC+AGG | 0.259363 | 3_2:-88847465 | None:intergenic |
| CAGTCAATGCGACAAATTAT+AGG | 0.263877 | 3_2:-88847031 | None:intergenic |
| GACAAATTATAGGGTTTGTT+TGG | 0.287994 | 3_2:-88847021 | None:intergenic |
| CATGCTTGGACCTCAGATTA+TGG | 0.294369 | 3_2:+88845555 | Msa0435600:CDS |
| TTCCTCCAAACGAATATTTA+GGG | 0.301529 | 3_2:-88843457 | None:intergenic |
| GCATGACCCTTTAAATATTC+CGG | 0.302181 | 3_2:-88847477 | None:intergenic |
| TGTGATTGTTTCGTTAAGTT+TGG | 0.304907 | 3_2:-88842089 | None:intergenic |
| TCACACCCGTGTCTGTTATA+TGG | 0.305529 | 3_2:+88844999 | Msa0435600:CDS |
| GATATTGCAGAGGTTCGTTT+AGG | 0.308709 | 3_2:-88841813 | None:intergenic |
| ACAAATTATAGGGTTTGTTT+GGG | 0.322529 | 3_2:-88847020 | None:intergenic |
| GAAAGGGTTTGTTGAGAAAC+AGG | 0.331155 | 3_2:+88842024 | Msa0435600:CDS |
| CAGTAGTACAGTTTGTTAAC+TGG | 0.333458 | 3_2:-88844149 | None:intergenic |
| TAAACTAGTCCGAGTAGATT+TGG | 0.336481 | 3_2:+88844331 | Msa0435600:CDS |
| TGTTGGTGCTTGCATAAATC+AGG | 0.336647 | 3_2:+88845283 | Msa0435600:CDS |
| TAAATGATTGACGATTCATT+TGG | 0.353765 | 3_2:-88847353 | None:intergenic |
| CCTTCGATGCATAACTTTCT+GGG | 0.355840 | 3_2:-88845239 | None:intergenic |
| AACAATGAACATTGGGATCT+TGG | 0.362802 | 3_2:-88844949 | None:intergenic |
| CCTTTCACTTCTTCAGCATC+AGG | 0.363467 | 3_2:-88842007 | None:intergenic |
| ATTGTACTCACAAAACATTT+AGG | 0.364515 | 3_2:+88845071 | Msa0435600:CDS |
| GATAATAAAGCATATGATAA+AGG | 0.364685 | 3_2:-88843379 | None:intergenic |
| AGTCAATGCGACAAATTATA+GGG | 0.366757 | 3_2:-88847030 | None:intergenic |
| TTAGTTCCAGTGGTAGTGAT+TGG | 0.369107 | 3_2:+88842841 | Msa0435600:CDS |
| CCGTGTCTGTTATATGGATA+TGG | 0.375864 | 3_2:+88845005 | Msa0435600:CDS |
| GGGTCGTCCAACAAAGAAAA+TGG | 0.378215 | 3_2:+88847072 | Msa0435600:CDS |
| TATTCAACAGAGAAATGAAT+TGG | 0.387722 | 3_2:-88847305 | None:intergenic |
| CTCACCCATGATAAAGTATC+AGG | 0.390599 | 3_2:-88842906 | None:intergenic |
| GTTATCATGTGTCCAGCTAA+TGG | 0.391388 | 3_2:-88843019 | None:intergenic |
| GAAAACCCTAAATATTCGTT+TGG | 0.392760 | 3_2:+88843452 | Msa0435600:CDS |
| TATCAGTGCAACCTGGGAAC+AGG | 0.393410 | 3_2:+88844614 | Msa0435600:CDS |
| GGAGGAATTGTTACTGATGA+TGG | 0.394917 | 3_2:+88843473 | Msa0435600:CDS |
| AGAACATCAGCCCATGTGTT+TGG | 0.397071 | 3_2:-88844359 | None:intergenic |
| ATCTTGGTACCATCTTTACT+GGG | 0.399846 | 3_2:-88844933 | None:intergenic |
| AGAGAAATGAATTGGTTTGC+CGG | 0.401010 | 3_2:-88847297 | None:intergenic |
| ATATTGCAGAGGTTCGTTTA+GGG | 0.403171 | 3_2:-88841812 | None:intergenic |
| AAGTTAACAAGTTAACAATA+AGG | 0.403492 | 3_2:-88847510 | None:intergenic |
| AAATGATTGACGATTCATTT+GGG | 0.405369 | 3_2:-88847352 | None:intergenic |
| TTTGATGACTTCATTTCTGC+TGG | 0.418535 | 3_2:+88845185 | Msa0435600:CDS |
| GATGCATAACTTTCTGGGTT+GGG | 0.421422 | 3_2:-88845234 | None:intergenic |
| TTACTTGCCTGTAAGCATTC+CGG | 0.422857 | 3_2:+88847458 | Msa0435600:three_prime_UTR |
| ACTACACTCATTGAAGCTAT+TGG | 0.423920 | 3_2:+88846707 | Msa0435600:CDS |
| GTACAGAGACCTGAGCTCTT+TGG | 0.425018 | 3_2:+88845398 | Msa0435600:intron |
| ATACTCGTTAATTATTATCA+AGG | 0.428268 | 3_2:-88841718 | None:intergenic |
| GAGTCCGCATGTGCTGTAAA+TGG | 0.429061 | 3_2:+88844407 | Msa0435600:CDS |
| TATCAATAAGTTTGACAAAA+GGG | 0.434231 | 3_2:-88844229 | None:intergenic |
| TGAGCTCTTTGGCTGTGCAT+TGG | 0.436966 | 3_2:+88845409 | Msa0435600:CDS |
| GCCGTCAACAACATAGTTGA+TGG | 0.439546 | 3_2:-88846660 | None:intergenic |
| AGCATTCCGGAATATTTAAA+GGG | 0.440020 | 3_2:+88847471 | Msa0435600:three_prime_UTR |
| TTATCAATAAGTTTGACAAA+AGG | 0.440234 | 3_2:-88844230 | None:intergenic |
| ACAGGTTCAATTGACGAATT+CGG | 0.443464 | 3_2:+88842042 | Msa0435600:CDS |
| ATTGGCTCATGTTGGCGTTA+TGG | 0.447955 | 3_2:+88845427 | Msa0435600:CDS |
| TGTCGCATTGACTGCAAAGC+TGG | 0.451677 | 3_2:+88847040 | Msa0435600:CDS |
| CAAGTAAGAGACTTAAAATC+AGG | 0.451702 | 3_2:+88844476 | Msa0435600:CDS |
| CTCCGAGTTTCAAGTCAATC+AGG | 0.455720 | 3_2:+88844688 | Msa0435600:CDS |
| ACAAAGAGGAAGAGTTTCAT+TGG | 0.457004 | 3_2:+88845586 | Msa0435600:CDS |
| TTCTGTTCTATGCCGAAGAA+AGG | 0.457239 | 3_2:-88841775 | None:intergenic |
| ATTGTTACTCAGGTCATGCT+TGG | 0.458027 | 3_2:+88845541 | Msa0435600:intron |
| TGCATAATGTCCGGCGACCA+TGG | 0.458324 | 3_2:+88846607 | Msa0435600:CDS |
| TCACGTAATATCTTCAGATC+AGG | 0.458498 | 3_2:-88844641 | None:intergenic |
| CGATGCATAACTTTCTGGGT+TGG | 0.460252 | 3_2:-88845235 | None:intergenic |
| GATCAGGAGTCCCTGTTCCC+AGG | 0.461520 | 3_2:-88844625 | None:intergenic |
| TAGTTCCAGTGGTAGTGATT+GGG | 0.463735 | 3_2:+88842842 | Msa0435600:CDS |
| CCCATCAACTATGTTGTTGA+CGG | 0.472540 | 3_2:+88846659 | Msa0435600:CDS |
| ACAAACCTATGGTAAATTTG+TGG | 0.473864 | 3_2:-88845463 | None:intergenic |
| TAAACTGTGCCAATGTCAAT+TGG | 0.475125 | 3_2:-88844518 | None:intergenic |
| GATGGAGAAGTGGTAGATGC+TGG | 0.477294 | 3_2:+88843338 | Msa0435600:CDS |
| AGTGGTTGTTACCATCGATA+AGG | 0.480628 | 3_2:-88841895 | None:intergenic |
| TTACGTGAAATTGCAGTCCC+TGG | 0.488900 | 3_2:+88844656 | Msa0435600:CDS |
| TATCGTCTATCAGTGCAACC+TGG | 0.489294 | 3_2:+88844607 | Msa0435600:CDS |
| AAATTTCTTTCAGGCAATGC+CGG | 0.492630 | 3_2:+88847278 | Msa0435600:three_prime_UTR |
| AACCCTAAATATTCGTTTGG+AGG | 0.493035 | 3_2:+88843455 | Msa0435600:CDS |
| GTGGAGAATATGGGGAAGAA+TGG | 0.493539 | 3_2:+88845126 | Msa0435600:CDS |
| TTTACAAGCTTTCTGTCTCC+CGG | 0.495034 | 3_2:+88844584 | Msa0435600:CDS |
| TGCAAAGCTGGACATGGAGC+GGG | 0.497868 | 3_2:+88847052 | Msa0435600:CDS |
| GACATCACTTACTTGGGTGC+TGG | 0.498134 | 3_2:-88843066 | None:intergenic |
| TACGTGAAATTGCAGTCCCT+GGG | 0.499626 | 3_2:+88844657 | Msa0435600:CDS |
| TTCGTGGTGGTGGAGAATAT+GGG | 0.500297 | 3_2:+88845117 | Msa0435600:CDS |
| TACTGCATTGCGAATATTCG+TGG | 0.503623 | 3_2:+88845101 | Msa0435600:CDS |
| CTGAGCCTGATACTTTATCA+TGG | 0.506192 | 3_2:+88842901 | Msa0435600:CDS |
| CACACCCTTCGCTAATATAG+AGG | 0.509249 | 3_2:-88844124 | None:intergenic |
| CGGTTCCACAAATTTACCAT+AGG | 0.509404 | 3_2:+88845458 | Msa0435600:CDS |
| GGCTGTGCATTGGCTCATGT+TGG | 0.510464 | 3_2:+88845419 | Msa0435600:CDS |
| GGGTATTGAATTGACTTGTC+AGG | 0.510562 | 3_2:-88846639 | None:intergenic |
| GAGTGAAGATGCCAAGTACT+TGG | 0.512289 | 3_2:+88842809 | Msa0435600:CDS |
| AAGCGCATAAGCCAAGTACT+TGG | 0.519968 | 3_2:-88842820 | None:intergenic |
| AGCAATGGTGGACTTCTTGT+TGG | 0.523888 | 3_2:+88845266 | Msa0435600:CDS |
| CTCCTCCTCTATATTAGCGA+AGG | 0.526676 | 3_2:+88844119 | Msa0435600:CDS |
| AATGCACAGCCAAAGAGCTC+AGG | 0.531544 | 3_2:-88845407 | None:intergenic |
| TGGTGAATACCTTGTGTCCA+CGG | 0.533386 | 3_2:+88845205 | Msa0435600:CDS |
| GATCACAGTATATATAAGAA+TGG | 0.534191 | 3_2:+88847251 | Msa0435600:three_prime_UTR |
| TTCATTTGGGTATGGTAGCA+TGG | 0.535902 | 3_2:-88847339 | None:intergenic |
| GATGCTGTTCCCATGGTCGC+CGG | 0.536594 | 3_2:-88846617 | None:intergenic |
| CATCAACTGCCAATTGACAT+TGG | 0.537917 | 3_2:+88844509 | Msa0435600:CDS |
| TCAAGTAACTTACTATCAGT+TGG | 0.539330 | 3_2:-88844433 | None:intergenic |
| GAGTCGTCTCTGCGAGCCGC+GGG | 0.539395 | 3_2:-88841835 | None:intergenic |
| ATTGACGATTCATTTGGGTA+TGG | 0.544799 | 3_2:-88847347 | None:intergenic |
| AGATGTTGAAATGTGAAAGA+AGG | 0.547877 | 3_2:-88841745 | None:intergenic |
| AATAAGTTTGACAAAAGGGA+GGG | 0.548091 | 3_2:-88844225 | None:intergenic |
| GCATAATGTCCGGCGACCAT+GGG | 0.548592 | 3_2:+88846608 | Msa0435600:CDS |
| CCCAGAAAGTTATGCATCGA+AGG | 0.551858 | 3_2:+88845239 | Msa0435600:CDS |
| AGTCGCCCAATCACTACCAC+TGG | 0.556942 | 3_2:-88842847 | None:intergenic |
| ACTCACCATTGCATAATGTC+CGG | 0.556955 | 3_2:+88846598 | Msa0435600:CDS |
| TATAAAAGTGTTGCGTATCG+AGG | 0.557739 | 3_2:+88842869 | Msa0435600:CDS |
| TCCTCCTCTATATTAGCGAA+GGG | 0.558762 | 3_2:+88844120 | Msa0435600:CDS |
| CTGATGCTGAAGAAGTGAAA+GGG | 0.561050 | 3_2:+88842008 | Msa0435600:CDS |
| CCTGATGCTGAAGAAGTGAA+AGG | 0.563636 | 3_2:+88842007 | Msa0435600:CDS |
| AGTACATCTTTGTCAGACTC+TGG | 0.565246 | 3_2:-88844383 | None:intergenic |
| GAGGAATTGTTACTGATGAT+GGG | 0.565555 | 3_2:+88843474 | Msa0435600:CDS |
| TGCATCGAAGGTGGAAGCAA+TGG | 0.565720 | 3_2:+88845251 | Msa0435600:CDS |
| TTGGTTTCTCCAAATCTACT+CGG | 0.566098 | 3_2:-88844340 | None:intergenic |
| GTGGTTGTTACCATCGATAA+GGG | 0.567279 | 3_2:-88841894 | None:intergenic |
| TTGGCGTTATGGACATGCTA+CGG | 0.568137 | 3_2:+88845438 | Msa0435600:CDS |
| ACACTCATTGAAGCTATTGG+CGG | 0.569808 | 3_2:+88846710 | Msa0435600:CDS |
| ATGGAGAAGTGGTAGATGCT+GGG | 0.570455 | 3_2:+88843339 | Msa0435600:CDS |
| GTATGTGCTATGTAGTAGCT+TGG | 0.575854 | 3_2:+88846988 | Msa0435600:CDS |
| TATATATACTGTGATCGAGT+GGG | 0.576156 | 3_2:-88847244 | None:intergenic |
| TGCACGGCGTGAAGATAATG+TGG | 0.577932 | 3_2:+88844550 | Msa0435600:CDS |
| GGGGAAGAATGGCATAAAGC+AGG | 0.580032 | 3_2:+88845137 | Msa0435600:CDS |
| ATCAGTGCAACCTGGGAACA+GGG | 0.581043 | 3_2:+88844615 | Msa0435600:CDS |
| GGGTATAACCCGTGGACACA+AGG | 0.581061 | 3_2:-88845214 | None:intergenic |
| GTTGCACTGATAGACGATAC+CGG | 0.582502 | 3_2:-88844603 | None:intergenic |
| AGAGTCGTCTCTGCGAGCCG+CGG | 0.586403 | 3_2:-88841836 | None:intergenic |
| CCATATCCATATAACAGACA+CGG | 0.588695 | 3_2:-88845005 | None:intergenic |
| ATAAGTTTGACAAAAGGGAG+GGG | 0.588761 | 3_2:-88844224 | None:intergenic |
| CATAGAACAGAACAATAGCA+TGG | 0.589976 | 3_2:+88841786 | Msa0435600:exon |
| TCGTGGTGGTGGAGAATATG+GGG | 0.590290 | 3_2:+88845118 | Msa0435600:CDS |
| GGTGAATACCTTGTGTCCAC+GGG | 0.591999 | 3_2:+88845206 | Msa0435600:CDS |
| CCGTCAACAACATAGTTGAT+GGG | 0.594747 | 3_2:-88846659 | None:intergenic |
| CTGCAAAGCTGGACATGGAG+CGG | 0.598830 | 3_2:+88847051 | Msa0435600:CDS |
| AACTCGGAGCGATCAAACCC+AGG | 0.600975 | 3_2:-88844674 | None:intergenic |
| CTTACTTGGGTGCTGGATAG+CGG | 0.601152 | 3_2:-88843059 | None:intergenic |
| TTGTCAGGATGCTGTTCCCA+TGG | 0.603618 | 3_2:-88846624 | None:intergenic |
| ATACTGTAGAGATGGAGAAG+TGG | 0.604745 | 3_2:+88843328 | Msa0435600:intron |
| ATTGACTGCAAAGCTGGACA+TGG | 0.604773 | 3_2:+88847046 | Msa0435600:CDS |
| GCTTATGCGCTTAGTTCCAG+TGG | 0.605231 | 3_2:+88842831 | Msa0435600:CDS |
| TTATATATACTGTGATCGAG+TGG | 0.610417 | 3_2:-88847245 | None:intergenic |
| CAATAAGTTTGACAAAAGGG+AGG | 0.615544 | 3_2:-88844226 | None:intergenic |
| CAGTTTATGATATTTCTGCA+CGG | 0.617175 | 3_2:+88844534 | Msa0435600:CDS |
| CAAATTATAGGGTTTGTTTG+GGG | 0.617870 | 3_2:-88847019 | None:intergenic |
| ATTGCGAATATTCGTGGTGG+TGG | 0.619449 | 3_2:+88845107 | Msa0435600:CDS |
| GTTACCATTTACAGCACATG+CGG | 0.620959 | 3_2:-88844411 | None:intergenic |
| AGAAAGTTATGCATCGAAGG+TGG | 0.621187 | 3_2:+88845242 | Msa0435600:CDS |
| ATCGTCTATCAGTGCAACCT+GGG | 0.624634 | 3_2:+88844608 | Msa0435600:CDS |
| TTGTTACCATCGATAAGGGT+CGG | 0.625434 | 3_2:-88841890 | None:intergenic |
| AATTGGCAGTTGATGCAACA+AGG | 0.625956 | 3_2:-88844501 | None:intergenic |
| ATCGAAGGTGGAAGCAATGG+TGG | 0.626239 | 3_2:+88845254 | Msa0435600:CDS |
| TACCTGATTGACTTGAAACT+CGG | 0.626953 | 3_2:-88844690 | None:intergenic |
| TCTGGGTTGGGTATAACCCG+TGG | 0.626963 | 3_2:-88845222 | None:intergenic |
| AGATCGATGAAACTGCTGAT+CGG | 0.628843 | 3_2:+88847174 | Msa0435600:intron |
| TTGCACTGATAGACGATACC+GGG | 0.631013 | 3_2:-88844602 | None:intergenic |
| GTCTGCACAACCATAATCTG+AGG | 0.634336 | 3_2:-88845565 | None:intergenic |
| ACTACATAGCACATACTGCA+TGG | 0.637775 | 3_2:-88846981 | None:intergenic |
| TACAATGCGACTAACACTGA+AGG | 0.640264 | 3_2:-88845054 | None:intergenic |
| ATTTGGAGAAACCAAACACA+TGG | 0.643157 | 3_2:+88844348 | Msa0435600:CDS |
| AATAGCTTCAATGAGTGTAG+TGG | 0.645106 | 3_2:-88846705 | None:intergenic |
| TGAGCCTGATACTTTATCAT+GGG | 0.645810 | 3_2:+88842902 | Msa0435600:CDS |
| ATAGAACAGAACAATAGCAT+GGG | 0.651501 | 3_2:+88841787 | Msa0435600:exon |
| TTATGGTTGTGCAGACAAAG+AGG | 0.652699 | 3_2:+88845572 | Msa0435600:CDS |
| ACCCTTCGCTAATATAGAGG+AGG | 0.652831 | 3_2:-88844121 | None:intergenic |
| AAATCGCCGACCCTTATCGA+TGG | 0.652884 | 3_2:+88841884 | Msa0435600:CDS |
| CGAGCCGCGGGATATTGCAG+AGG | 0.656134 | 3_2:-88841823 | None:intergenic |
| AATTGTTACTGATGATGGGA+AGG | 0.656399 | 3_2:+88843478 | Msa0435600:CDS |
| AGCTGGACACATGATAACAA+AGG | 0.661177 | 3_2:+88843024 | Msa0435600:CDS |
| GGTCGCCGGACATTATGCAA+TGG | 0.661401 | 3_2:-88846603 | None:intergenic |
| CATATCCATATAACAGACAC+GGG | 0.665897 | 3_2:-88845004 | None:intergenic |
| ATCATGTGTCCAGCTAATGG+AGG | 0.666044 | 3_2:-88843016 | None:intergenic |
| ATGCGACTAACACTGAAGGA+TGG | 0.667946 | 3_2:-88845050 | None:intergenic |
| ACTCGGAGCGATCAAACCCA+GGG | 0.675535 | 3_2:-88844673 | None:intergenic |
| TGTCTGTTATATGGATATGG+TGG | 0.678377 | 3_2:+88845008 | Msa0435600:CDS |
| TGGTACTTCAGAAATTGATG+CGG | 0.690564 | 3_2:+88847424 | Msa0435600:three_prime_UTR |
| TGCATTGCGAATATTCGTGG+TGG | 0.694680 | 3_2:+88845104 | Msa0435600:CDS |
| TCTTGGTACCATCTTTACTG+GGG | 0.699589 | 3_2:-88844932 | None:intergenic |
| CGAACCTCTGCAATATCCCG+CGG | 0.709263 | 3_2:+88841819 | Msa0435600:CDS |
| TTTGGAGAAACCAAACACAT+GGG | 0.715304 | 3_2:+88844349 | Msa0435600:CDS |
| TCTGTCATTGACGATTACCA+TGG | 0.715354 | 3_2:+88841856 | Msa0435600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATTTAACAAAGTATAAATA+TGG | + | chr3_2:88843144-88843163 | Msa0435600:intron | 10.0% |
| !! | GATATATATTAAAGAAAATA+AGG | - | chr3_2:88845693-88845712 | None:intergenic | 10.0% |
| !! | AAAACATTAAAAATCATCAA+TGG | - | chr3_2:88842979-88842998 | None:intergenic | 15.0% |
| !!! | TATGCTTTATTATCATTTTT+TGG | + | chr3_2:88843388-88843407 | Msa0435600:CDS | 15.0% |
| !!! | ATGCTTTATTATCATTTTTT+GGG | + | chr3_2:88843389-88843408 | Msa0435600:CDS | 15.0% |
| !!! | GTTTACATTTTTAACTAATA+AGG | + | chr3_2:88844295-88844314 | Msa0435600:CDS | 15.0% |
| !! | AAATTTATCCTTAATATTTC+AGG | - | chr3_2:88845636-88845655 | None:intergenic | 15.0% |
| !!! | TTTTCTTTAATATATATCAG+CGG | + | chr3_2:88845695-88845714 | Msa0435600:intron | 15.0% |
| !! | AAAAGAAAACAAAATCAAAA+TGG | - | chr3_2:88846027-88846046 | None:intergenic | 15.0% |
| !! | TCATTTATCAATCAATATAA+TGG | + | chr3_2:88846170-88846189 | Msa0435600:intron | 15.0% |
| !!! | AGTTCAATAATTATTTCTTA+AGG | + | chr3_2:88846294-88846313 | Msa0435600:intron | 15.0% |
| !!! | GTTCAATAATTATTTCTTAA+GGG | + | chr3_2:88846295-88846314 | Msa0435600:intron | 15.0% |
| !!! | TTCAATAATTATTTCTTAAG+GGG | + | chr3_2:88846296-88846315 | Msa0435600:intron | 15.0% |
| !! | ATACTCGTTAATTATTATCA+AGG | - | chr3_2:88841721-88841740 | None:intergenic | 20.0% |
| !!! | CTTTTTCTTTTCTTTTTTGA+AGG | + | chr3_2:88841975-88841994 | Msa0435600:intron | 20.0% |
| !!! | GCTTTGTTTTTTTTATTAGT+CGG | + | chr3_2:88842267-88842286 | Msa0435600:intron | 20.0% |
| !!! | TTTTTTTATTAGTCGGATTT+AGG | + | chr3_2:88842274-88842293 | Msa0435600:intron | 20.0% |
| !!! | TTTTTTATTAGTCGGATTTA+GGG | + | chr3_2:88842275-88842294 | Msa0435600:intron | 20.0% |
| !! | TTTCATAAACTCTTTAGTAT+AGG | + | chr3_2:88842568-88842587 | Msa0435600:intron | 20.0% |
| !!! | AAGTTATCTTTTCATTTTAC+AGG | + | chr3_2:88842701-88842720 | Msa0435600:intron | 20.0% |
| !!! | GATTTTTAATGTTTTGTTTC+AGG | + | chr3_2:88842984-88843003 | Msa0435600:intron | 20.0% |
| !! | TTGAATTGGTATTATCTATA+TGG | + | chr3_2:88843208-88843227 | Msa0435600:intron | 20.0% |
| !! | GATAATAAAGCATATGATAA+AGG | - | chr3_2:88843382-88843401 | None:intergenic | 20.0% |
| !! | TAAAATAAGAAAACATGCAA+CGG | + | chr3_2:88843563-88843582 | Msa0435600:intron | 20.0% |
| !! | ATAAGAATTCAAAACTATTC+AGG | - | chr3_2:88843907-88843926 | None:intergenic | 20.0% |
| !!! | GTTATGTAATTTTATGCATA+TGG | + | chr3_2:88844047-88844066 | Msa0435600:intron | 20.0% |
| !! | TATCAATAAGTTTGACAAAA+GGG | - | chr3_2:88844232-88844251 | None:intergenic | 20.0% |
| !! | TTATCAATAAGTTTGACAAA+AGG | - | chr3_2:88844233-88844252 | None:intergenic | 20.0% |
| !! | AAGTTGTTACATTGTTAAAT+AGG | + | chr3_2:88844796-88844815 | Msa0435600:intron | 20.0% |
| !! | AGGATAAATTTCAATATGTT+AGG | + | chr3_2:88845645-88845664 | Msa0435600:intron | 20.0% |
| !! | AATTAAGGGATATTAATCAA+AGG | - | chr3_2:88845963-88845982 | None:intergenic | 20.0% |
| !! | TTTGATTAATATCCCTTAAT+TGG | + | chr3_2:88845962-88845981 | Msa0435600:intron | 20.0% |
| !! | ATTAACAATAGTCCAATTAA+GGG | - | chr3_2:88845977-88845996 | None:intergenic | 20.0% |
| !! | TTTATCAATCAATATAATGG+AGG | + | chr3_2:88846173-88846192 | Msa0435600:intron | 20.0% |
| !! | CTCTATAAATATCAAAATGA+TGG | + | chr3_2:88846207-88846226 | Msa0435600:intron | 20.0% |
| !!! | TTTATTGTTTGGATATGTTT+TGG | + | chr3_2:88846528-88846547 | Msa0435600:intron | 20.0% |
| !! | CTATTATTATTTACTGCTTT+AGG | + | chr3_2:88846574-88846593 | Msa0435600:intron | 20.0% |
| !! | AAAGAAAATGGTAAGAATTA+TGG | + | chr3_2:88847084-88847103 | Msa0435600:intron | 20.0% |
| !! | GATATATAAAAGGTAGAAAA+AGG | - | chr3_2:88847125-88847144 | None:intergenic | 20.0% |
| !! | AATGGAATAAAATTTCTTTC+AGG | + | chr3_2:88847269-88847288 | Msa0435600:three_prime_UTR | 20.0% |
| !! | GAAAGTTGTTATAAAAACAT+TGG | + | chr3_2:88847404-88847423 | Msa0435600:three_prime_UTR | 20.0% |
| !! | AAGTTAACAAGTTAACAATA+AGG | - | chr3_2:88847513-88847532 | None:intergenic | 20.0% |
| !!! | ATGGAAGTAAAAGTACTTAT+CGG | - | chr3_2:88842158-88842177 | None:intergenic | 25.0% |
| ! | TAAACACTAATGTGATTGTT+TGG | + | chr3_2:88842326-88842345 | Msa0435600:intron | 25.0% |
| !! | TTTTGAATTCATCTGATTCA+GGG | + | chr3_2:88842444-88842463 | Msa0435600:intron | 25.0% |
| ! | AAGAGTTTATGAAAATAAGC+CGG | - | chr3_2:88842562-88842581 | None:intergenic | 25.0% |
| !! | ATTAAGTTGTTTATCCAAAC+AGG | + | chr3_2:88842674-88842693 | Msa0435600:intron | 25.0% |
| !! | TTTCATTTTACAGGATAGTT+TGG | + | chr3_2:88842710-88842729 | Msa0435600:intron | 25.0% |
| !! | TGTATCATTGAACACATTTT+CGG | + | chr3_2:88842785-88842804 | Msa0435600:CDS | 25.0% |
| ! | TCATCAAAGATGATTTGAAT+TGG | + | chr3_2:88843194-88843213 | Msa0435600:intron | 25.0% |
| ! | AACTTATGTATGATTGTTCT+TGG | + | chr3_2:88843244-88843263 | Msa0435600:intron | 25.0% |
| !!! | TTATTATCATTTTTTGGGCA+CGG | + | chr3_2:88843394-88843413 | Msa0435600:CDS | 25.0% |
| ! | AGAAATTCTAATGTTCAATC+AGG | - | chr3_2:88843695-88843714 | None:intergenic | 25.0% |
| !! | CAACTTTGAAAAAATGTGTT+TGG | + | chr3_2:88843843-88843862 | Msa0435600:intron | 25.0% |
| !!! | TCAAAACTATTCAGGTTTTA+TGG | - | chr3_2:88843899-88843918 | None:intergenic | 25.0% |
| ! | TCTTATGTAACAACATATCA+AGG | + | chr3_2:88843927-88843946 | Msa0435600:intron | 25.0% |
| ! | AAAAACAGAATCAGATTCAT+GGG | - | chr3_2:88844083-88844102 | None:intergenic | 25.0% |
| ! | TAAAAACAGAATCAGATTCA+TGG | - | chr3_2:88844084-88844103 | None:intergenic | 25.0% |
| !!! | AAAAAGGATATTGTTTTGGA+TGG | + | chr3_2:88844975-88844994 | Msa0435600:CDS | 25.0% |
| ! | ATTGTACTCACAAAACATTT+AGG | + | chr3_2:88845071-88845090 | Msa0435600:CDS | 25.0% |
| ! | AATGAATCTAAACAAACCTA+TGG | - | chr3_2:88845477-88845496 | None:intergenic | 25.0% |
| ! | GATTAACAATAGTCCAATTA+AGG | - | chr3_2:88845978-88845997 | None:intergenic | 25.0% |
| !!! | TTGATTTTGTTTTCTTTTCC+TGG | + | chr3_2:88846029-88846048 | Msa0435600:intron | 25.0% |
| !! | TAATTATTTCTTAAGGGGAA+TGG | + | chr3_2:88846301-88846320 | Msa0435600:intron | 25.0% |
| ! | TGGTATTCATAATTATTTCC+TGG | + | chr3_2:88846366-88846385 | Msa0435600:intron | 25.0% |
| ! | TTAACAAATAGTTGTCACAT+AGG | + | chr3_2:88846834-88846853 | Msa0435600:intron | 25.0% |
| ! | TAACAAATAGTTGTCACATA+GGG | + | chr3_2:88846835-88846854 | Msa0435600:intron | 25.0% |
| !! | ACAAATTATAGGGTTTGTTT+GGG | - | chr3_2:88847023-88847042 | None:intergenic | 25.0% |
| !! | ATTCTTACCATTTTCTTTGT+TGG | - | chr3_2:88847082-88847101 | None:intergenic | 25.0% |
| ! | CTTCAGACATGATATATAAA+AGG | - | chr3_2:88847135-88847154 | None:intergenic | 25.0% |
| ! | GATCACAGTATATATAAGAA+TGG | + | chr3_2:88847251-88847270 | Msa0435600:three_prime_UTR | 25.0% |
| ! | TATTCAACAGAGAAATGAAT+TGG | - | chr3_2:88847308-88847327 | None:intergenic | 25.0% |
| ! | AAATGATTGACGATTCATTT+GGG | - | chr3_2:88847355-88847374 | None:intergenic | 25.0% |
| ! | TAAATGATTGACGATTCATT+TGG | - | chr3_2:88847356-88847375 | None:intergenic | 25.0% |
| AGATGTTGAAATGTGAAAGA+AGG | - | chr3_2:88841748-88841767 | None:intergenic | 30.0% | |
| ! | CATCTTTTATCTCCTTTCTT+CGG | + | chr3_2:88841763-88841782 | Msa0435600:five_prime_UTR | 30.0% |
| ATAGAACAGAACAATAGCAT+GGG | + | chr3_2:88841787-88841806 | Msa0435600:exon | 30.0% | |
| ATTGAATGAATTTGAGTCAG+TGG | - | chr3_2:88841916-88841935 | None:intergenic | 30.0% | |
| !!! | TTCTTTTCTTTTTTGAAGGC+TGG | + | chr3_2:88841979-88841998 | Msa0435600:intron | 30.0% |
| TGTGATTGTTTCGTTAAGTT+TGG | - | chr3_2:88842092-88842111 | None:intergenic | 30.0% | |
| ! | TACTTTTACTTCCATAACAC+TGG | + | chr3_2:88842163-88842182 | Msa0435600:intron | 30.0% |
| !! | GTTTTGAATTCATCTGATTC+AGG | + | chr3_2:88842443-88842462 | Msa0435600:intron | 30.0% |
| CTCAAACAGTTTCACTAAAT+GGG | - | chr3_2:88842492-88842511 | None:intergenic | 30.0% | |
| TCTCAAACAGTTTCACTAAA+TGG | - | chr3_2:88842493-88842512 | None:intergenic | 30.0% | |
| GAAATGTCATAACTCATAAG+CGG | - | chr3_2:88842528-88842547 | None:intergenic | 30.0% | |
| AAGATAACTTAGAACCTGTT+TGG | - | chr3_2:88842691-88842710 | None:intergenic | 30.0% | |
| ! | ATTTTACAGGATAGTTTGGA+GGG | + | chr3_2:88842714-88842733 | Msa0435600:intron | 30.0% |
| !!! | CCTGTTTTAATTTCTAGCAA+AGG | - | chr3_2:88842944-88842963 | None:intergenic | 30.0% |
| CCTTTGCTAGAAATTAAAAC+AGG | + | chr3_2:88842941-88842960 | Msa0435600:intron | 30.0% | |
| ! | TTAAATTTTCCTCCATTAGC+TGG | + | chr3_2:88843007-88843026 | Msa0435600:CDS | 30.0% |
| GAAAACCCTAAATATTCGTT+TGG | + | chr3_2:88843452-88843471 | Msa0435600:CDS | 30.0% | |
| TTCCTCCAAACGAATATTTA+GGG | - | chr3_2:88843460-88843479 | None:intergenic | 30.0% | |
| ATTCCTCCAAACGAATATTT+AGG | - | chr3_2:88843461-88843480 | None:intergenic | 30.0% | |
| ATCATCAAATACATTGACGT+TGG | - | chr3_2:88843615-88843634 | None:intergenic | 30.0% | |
| !! | TAATAACCAAAGTGCTGAAA+TGG | - | chr3_2:88843780-88843799 | None:intergenic | 30.0% |
| !!! | TAAGTGACCGAGTTTTTTTT+AGG | + | chr3_2:88843798-88843817 | Msa0435600:intron | 30.0% |
| TCACTTGCCTAAAAAAAACT+CGG | - | chr3_2:88843808-88843827 | None:intergenic | 30.0% | |
| CTTTAGTACATCTAATTCCA+CGG | + | chr3_2:88843972-88843991 | Msa0435600:intron | 30.0% | |
| AATAAGTTTGACAAAAGGGA+GGG | - | chr3_2:88844228-88844247 | None:intergenic | 30.0% | |
| !!! | ACTCGGACTAGTTTATATTT+TGG | - | chr3_2:88844326-88844345 | None:intergenic | 30.0% |
| TCAAGTAACTTACTATCAGT+TGG | - | chr3_2:88844436-88844455 | None:intergenic | 30.0% | |
| CAAGTAAGAGACTTAAAATC+AGG | + | chr3_2:88844476-88844495 | Msa0435600:CDS | 30.0% | |
| ! | CAGTTTATGATATTTCTGCA+CGG | + | chr3_2:88844534-88844553 | Msa0435600:CDS | 30.0% |
| CAAATACTGGAATTCAAAAC+AGG | - | chr3_2:88844758-88844777 | None:intergenic | 30.0% | |
| !! | CTGTTTTGAATTCCAGTATT+TGG | + | chr3_2:88844756-88844775 | Msa0435600:intron | 30.0% |
| ! | ATGTGGAAAGCACATAAAAA+AGG | - | chr3_2:88844899-88844918 | None:intergenic | 30.0% |
| ! | TTTTCGCAACAATGAACATT+GGG | - | chr3_2:88844959-88844978 | None:intergenic | 30.0% |
| ! | TTTTTCGCAACAATGAACAT+TGG | - | chr3_2:88844960-88844979 | None:intergenic | 30.0% |
| AATGTTCATTGTTGCGAAAA+AGG | + | chr3_2:88844959-88844978 | Msa0435600:CDS | 30.0% | |
| ! | TGCGAAAAAGGATATTGTTT+TGG | + | chr3_2:88844971-88844990 | Msa0435600:CDS | 30.0% |
| !!! | GCAATTCTGTTTTTTAGCAA+GGG | - | chr3_2:88845165-88845184 | None:intergenic | 30.0% |
| !!! | AGCAATTCTGTTTTTTAGCA+AGG | - | chr3_2:88845166-88845185 | None:intergenic | 30.0% |
| !!! | TGCTTTGTTTTTCCATTTCT+AGG | + | chr3_2:88845317-88845336 | Msa0435600:intron | 30.0% |
| TAAATAGAGAGCTGTTGAAT+GGG | - | chr3_2:88845351-88845370 | None:intergenic | 30.0% | |
| ATAAATAGAGAGCTGTTGAA+TGG | - | chr3_2:88845352-88845371 | None:intergenic | 30.0% | |
| ACAAACCTATGGTAAATTTG+TGG | - | chr3_2:88845466-88845485 | None:intergenic | 30.0% | |
| CATTTCTTTAAACAAGCTAC+TGG | - | chr3_2:88845504-88845523 | None:intergenic | 30.0% | |
| CTGATTCTTAATTGTTACTC+AGG | + | chr3_2:88845531-88845550 | Msa0435600:intron | 30.0% | |
| !! | TAATCAAGTGAGTTTTATCC+TGG | + | chr3_2:88845610-88845629 | Msa0435600:intron | 30.0% |
| ! | TTATTAGTAAGTGCTGTTAG+TGG | + | chr3_2:88845722-88845741 | Msa0435600:intron | 30.0% |
| TAGATGCATAACAGAGAAAT+AGG | + | chr3_2:88845857-88845876 | Msa0435600:intron | 30.0% | |
| ! | GAGATATGATTTTCACTTAC+TGG | - | chr3_2:88845903-88845922 | None:intergenic | 30.0% |
| TTAATCAAAGGTCCAACAAA+GGG | - | chr3_2:88845951-88845970 | None:intergenic | 30.0% | |
| ATTAATCAAAGGTCCAACAA+AGG | - | chr3_2:88845952-88845971 | None:intergenic | 30.0% | |
| TCAAAATGGACATGATATCA+TGG | - | chr3_2:88846013-88846032 | None:intergenic | 30.0% | |
| CTCAAAATACGAGGATAAAA+TGG | - | chr3_2:88846414-88846433 | None:intergenic | 30.0% | |
| ! | CATTTTATCCTCGTATTTTG+AGG | + | chr3_2:88846412-88846431 | Msa0435600:intron | 30.0% |
| ATCCAAACAATAAAAACCAC+AGG | - | chr3_2:88846522-88846541 | None:intergenic | 30.0% | |
| !!! | TTGTTTGGATATGTTTTGGT+AGG | + | chr3_2:88846532-88846551 | Msa0435600:intron | 30.0% |
| AACAAATAGTTGTCACATAG+GGG | + | chr3_2:88846836-88846855 | Msa0435600:intron | 30.0% | |
| TAGAGAGAAGAAAAGGAAAA+GGG | - | chr3_2:88846931-88846950 | None:intergenic | 30.0% | |
| ATAGAGAGAAGAAAAGGAAA+AGG | - | chr3_2:88846932-88846951 | None:intergenic | 30.0% | |
| ! | CAAATTATAGGGTTTGTTTG+GGG | - | chr3_2:88847022-88847041 | None:intergenic | 30.0% |
| ! | GACAAATTATAGGGTTTGTT+TGG | - | chr3_2:88847024-88847043 | None:intergenic | 30.0% |
| AGTCAATGCGACAAATTATA+GGG | - | chr3_2:88847033-88847052 | None:intergenic | 30.0% | |
| ATGGTAAGAATTATGGTTTC+AGG | + | chr3_2:88847091-88847110 | Msa0435600:intron | 30.0% | |
| ! | CAAAAATGTTAGAAGCACAT+TGG | + | chr3_2:88847210-88847229 | Msa0435600:CDS | 30.0% |
| TATATATACTGTGATCGAGT+GGG | - | chr3_2:88847247-88847266 | None:intergenic | 30.0% | |
| TTATATATACTGTGATCGAG+TGG | - | chr3_2:88847248-88847267 | None:intergenic | 30.0% | |
| AAGCATTCCGGAATATTTAA+AGG | + | chr3_2:88847470-88847489 | Msa0435600:three_prime_UTR | 30.0% | |
| AGCATTCCGGAATATTTAAA+GGG | + | chr3_2:88847471-88847490 | Msa0435600:three_prime_UTR | 30.0% | |
| CATAGAACAGAACAATAGCA+TGG | + | chr3_2:88841786-88841805 | Msa0435600:exon | 35.0% | |
| ATATTGCAGAGGTTCGTTTA+GGG | - | chr3_2:88841815-88841834 | None:intergenic | 35.0% | |
| ACAGGTTCAATTGACGAATT+CGG | + | chr3_2:88842042-88842061 | Msa0435600:CDS | 35.0% | |
| !! | TACTTATCGGCTCTTCTAAA+AGG | - | chr3_2:88842145-88842164 | None:intergenic | 35.0% |
| !! | GTTTGGTTTGAGAGAACTTA+TGG | + | chr3_2:88842343-88842362 | Msa0435600:intron | 35.0% |
| GCTCAATATGTCTATCCAAA+AGG | - | chr3_2:88842470-88842489 | None:intergenic | 35.0% | |
| ! | GACATTTCATATGTTGCTTC+CGG | + | chr3_2:88842540-88842559 | Msa0435600:intron | 35.0% |
| ! | CATTTTACAGGATAGTTTGG+AGG | + | chr3_2:88842713-88842732 | Msa0435600:intron | 35.0% |
| !! | TATAAAAGTGTTGCGTATCG+AGG | + | chr3_2:88842869-88842888 | Msa0435600:CDS | 35.0% |
| TGAGCCTGATACTTTATCAT+GGG | + | chr3_2:88842902-88842921 | Msa0435600:CDS | 35.0% | |
| ATTGCAAAACATGCACTTTC+CGG | - | chr3_2:88843109-88843128 | None:intergenic | 35.0% | |
| TGTATGATTGTTCTTGGTAC+TGG | + | chr3_2:88843250-88843269 | Msa0435600:intron | 35.0% | |
| !! | CTGCTTTTATACTGTAGAGA+TGG | + | chr3_2:88843320-88843339 | Msa0435600:intron | 35.0% |
| ! | AATCAGGAGATATTTTGTGC+TGG | + | chr3_2:88843420-88843439 | Msa0435600:CDS | 35.0% |
| AACCCTAAATATTCGTTTGG+AGG | + | chr3_2:88843455-88843474 | Msa0435600:CDS | 35.0% | |
| GAGGAATTGTTACTGATGAT+GGG | + | chr3_2:88843474-88843493 | Msa0435600:CDS | 35.0% | |
| !! | AATTGTTACTGATGATGGGA+AGG | + | chr3_2:88843478-88843497 | Msa0435600:CDS | 35.0% |
| TGCCTCCTAGAAAACAAATA+CGG | - | chr3_2:88843658-88843677 | None:intergenic | 35.0% | |
| TCTTGCTTAGTAATCTCCTA+TGG | + | chr3_2:88843712-88843731 | Msa0435600:intron | 35.0% | |
| CTTGCTTAGTAATCTCCTAT+GGG | + | chr3_2:88843713-88843732 | Msa0435600:intron | 35.0% | |
| TAACTTCCATTTCAGCACTT+TGG | + | chr3_2:88843771-88843790 | Msa0435600:intron | 35.0% | |
| TATGGCAACACTTCAAGAAA+GGG | - | chr3_2:88843881-88843900 | None:intergenic | 35.0% | |
| TTATGGCAACACTTCAAGAA+AGG | - | chr3_2:88843882-88843901 | None:intergenic | 35.0% | |
| TGTGATGAATATATCTTCCG+TGG | - | chr3_2:88843992-88844011 | None:intergenic | 35.0% | |
| TACATAACAGTGAGTTGCAA+AGG | - | chr3_2:88844035-88844054 | None:intergenic | 35.0% | |
| !! | CAGTAGTACAGTTTGTTAAC+TGG | - | chr3_2:88844152-88844171 | None:intergenic | 35.0% |
| ATAAGTTTGACAAAAGGGAG+GGG | - | chr3_2:88844227-88844246 | None:intergenic | 35.0% | |
| CAATAAGTTTGACAAAAGGG+AGG | - | chr3_2:88844229-88844248 | None:intergenic | 35.0% | |
| TAAACTAGTCCGAGTAGATT+TGG | + | chr3_2:88844331-88844350 | Msa0435600:CDS | 35.0% | |
| TTGGTTTCTCCAAATCTACT+CGG | - | chr3_2:88844343-88844362 | None:intergenic | 35.0% | |
| ATTTGGAGAAACCAAACACA+TGG | + | chr3_2:88844348-88844367 | Msa0435600:CDS | 35.0% | |
| TTTGGAGAAACCAAACACAT+GGG | + | chr3_2:88844349-88844368 | Msa0435600:CDS | 35.0% | |
| TAAACTGTGCCAATGTCAAT+TGG | - | chr3_2:88844521-88844540 | None:intergenic | 35.0% | |
| TCACGTAATATCTTCAGATC+AGG | - | chr3_2:88844644-88844663 | None:intergenic | 35.0% | |
| !! | TACCTGATTGACTTGAAACT+CGG | - | chr3_2:88844693-88844712 | None:intergenic | 35.0% |
| AAACAGGCAATTTAACAGTG+AGG | - | chr3_2:88844742-88844761 | None:intergenic | 35.0% | |
| ! | CCTGTTTTCATACCAAATAC+TGG | - | chr3_2:88844771-88844790 | None:intergenic | 35.0% |
| CCAGTATTTGGTATGAAAAC+AGG | + | chr3_2:88844768-88844787 | Msa0435600:intron | 35.0% | |
| TTGAATTCCTTTAGTCTGCA+TGG | + | chr3_2:88844824-88844843 | Msa0435600:intron | 35.0% | |
| TGAATTCCTTTAGTCTGCAT+GGG | + | chr3_2:88844825-88844844 | Msa0435600:intron | 35.0% | |
| ! | TGTATCATTGTTGCTTGACT+TGG | + | chr3_2:88844873-88844892 | Msa0435600:intron | 35.0% |
| TTATGTGCTTTCCACATTTC+AGG | + | chr3_2:88844902-88844921 | Msa0435600:intron | 35.0% | |
| ATCTTGGTACCATCTTTACT+GGG | - | chr3_2:88844936-88844955 | None:intergenic | 35.0% | |
| AACAATGAACATTGGGATCT+TGG | - | chr3_2:88844952-88844971 | None:intergenic | 35.0% | |
| CATATCCATATAACAGACAC+GGG | - | chr3_2:88845007-88845026 | None:intergenic | 35.0% | |
| CCATATCCATATAACAGACA+CGG | - | chr3_2:88845008-88845027 | None:intergenic | 35.0% | |
| TGTCTGTTATATGGATATGG+TGG | + | chr3_2:88845008-88845027 | Msa0435600:CDS | 35.0% | |
| ! | TTTGATGACTTCATTTCTGC+TGG | + | chr3_2:88845185-88845204 | Msa0435600:CDS | 35.0% |
| TCTCTGTACAGATAAAGGAA+AGG | - | chr3_2:88845387-88845406 | None:intergenic | 35.0% | |
| ACAAAGAGGAAGAGTTTCAT+TGG | + | chr3_2:88845586-88845605 | Msa0435600:CDS | 35.0% | |
| TATCCTGGCCTGAAATATTA+AGG | + | chr3_2:88845625-88845644 | Msa0435600:intron | 35.0% | |
| TATCCTTAATATTTCAGGCC+AGG | - | chr3_2:88845631-88845650 | None:intergenic | 35.0% | |
| CATATGGGAATTGTTCAAAC+CGG | - | chr3_2:88845768-88845787 | None:intergenic | 35.0% | |
| GTTTGAACAATTCCCATATG+TGG | + | chr3_2:88845768-88845787 | Msa0435600:intron | 35.0% | |
| CTATTGTTAATCACCACCAT+TGG | + | chr3_2:88845986-88846005 | Msa0435600:intron | 35.0% | |
| ! | AGAAGAGATAGTGTCATTGT+TGG | + | chr3_2:88846107-88846126 | Msa0435600:intron | 35.0% |
| GTGGCGTAAGAAAATAACTT+TGG | - | chr3_2:88846134-88846153 | None:intergenic | 35.0% | |
| TATTTCTTAAGGGGAATGGT+TGG | + | chr3_2:88846305-88846324 | Msa0435600:intron | 35.0% | |
| TTATTTCCTGGCATAAGTTG+AGG | + | chr3_2:88846378-88846397 | Msa0435600:intron | 35.0% | |
| AAACATGGTTGAGAAACAAC+AGG | - | chr3_2:88846474-88846493 | None:intergenic | 35.0% | |
| GCAATCTGTCTTTCAAAACA+TGG | - | chr3_2:88846489-88846508 | None:intergenic | 35.0% | |
| ! | CTCCTGTGGTTTTTATTGTT+TGG | + | chr3_2:88846517-88846536 | Msa0435600:intron | 35.0% |
| AATAGCTTCAATGAGTGTAG+TGG | - | chr3_2:88846708-88846727 | None:intergenic | 35.0% | |
| ACTACACTCATTGAAGCTAT+TGG | + | chr3_2:88846707-88846726 | Msa0435600:CDS | 35.0% | |
| GTTGCAAGTAACAGAATAAG+TGG | + | chr3_2:88846795-88846814 | Msa0435600:intron | 35.0% | |
| ACAAATAGTTGTCACATAGG+GGG | + | chr3_2:88846837-88846856 | Msa0435600:intron | 35.0% | |
| AGAGAGATAGAGAGAAGAAA+AGG | - | chr3_2:88846938-88846957 | None:intergenic | 35.0% | |
| CAGTCAATGCGACAAATTAT+AGG | - | chr3_2:88847034-88847053 | None:intergenic | 35.0% | |
| AAATTTCTTTCAGGCAATGC+CGG | + | chr3_2:88847278-88847297 | Msa0435600:three_prime_UTR | 35.0% | |
| !! | AGAGAAATGAATTGGTTTGC+CGG | - | chr3_2:88847300-88847319 | None:intergenic | 35.0% |
| ATTGACGATTCATTTGGGTA+TGG | - | chr3_2:88847350-88847369 | None:intergenic | 35.0% | |
| TGGTACTTCAGAAATTGATG+CGG | + | chr3_2:88847424-88847443 | Msa0435600:three_prime_UTR | 35.0% | |
| AAATATTCCGGAATGCTTAC+AGG | - | chr3_2:88847468-88847487 | None:intergenic | 35.0% | |
| GCATGACCCTTTAAATATTC+CGG | - | chr3_2:88847480-88847499 | None:intergenic | 35.0% | |
| TTCTGTTCTATGCCGAAGAA+AGG | - | chr3_2:88841778-88841797 | None:intergenic | 40.0% | |
| GATATTGCAGAGGTTCGTTT+AGG | - | chr3_2:88841816-88841835 | None:intergenic | 40.0% | |
| TCTGTCATTGACGATTACCA+TGG | + | chr3_2:88841856-88841875 | Msa0435600:CDS | 40.0% | |
| TTGTTACCATCGATAAGGGT+CGG | - | chr3_2:88841893-88841912 | None:intergenic | 40.0% | |
| GTGGTTGTTACCATCGATAA+GGG | - | chr3_2:88841897-88841916 | None:intergenic | 40.0% | |
| AGTGGTTGTTACCATCGATA+AGG | - | chr3_2:88841898-88841917 | None:intergenic | 40.0% | |
| CTGATGCTGAAGAAGTGAAA+GGG | + | chr3_2:88842008-88842027 | Msa0435600:CDS | 40.0% | |
| !! | GAAAGGGTTTGTTGAGAAAC+AGG | + | chr3_2:88842024-88842043 | Msa0435600:CDS | 40.0% |
| !! | CTAAAAGGAGCATCATAACG+AGG | - | chr3_2:88842130-88842149 | None:intergenic | 40.0% |
| TGTGAAAGTGAAAGCAAACC+TGG | - | chr3_2:88842216-88842235 | None:intergenic | 40.0% | |
| AAACTGTTTGAGAGAGCTTC+TGG | + | chr3_2:88842500-88842519 | Msa0435600:intron | 40.0% | |
| ! | CATCTTCACTCAAGGCATTT+GGG | - | chr3_2:88842761-88842780 | None:intergenic | 40.0% |
| TACAGTTCCATCTTCACTCA+AGG | - | chr3_2:88842769-88842788 | None:intergenic | 40.0% | |
| ! | TTAGTTCCAGTGGTAGTGAT+TGG | + | chr3_2:88842841-88842860 | Msa0435600:CDS | 40.0% |
| ! | TAGTTCCAGTGGTAGTGATT+GGG | + | chr3_2:88842842-88842861 | Msa0435600:CDS | 40.0% |
| CTGAGCCTGATACTTTATCA+TGG | + | chr3_2:88842901-88842920 | Msa0435600:CDS | 40.0% | |
| ! | CTCACCCATGATAAAGTATC+AGG | - | chr3_2:88842909-88842928 | None:intergenic | 40.0% |
| !! | TAATTTCTAGCAAAGGCACG+AGG | - | chr3_2:88842937-88842956 | None:intergenic | 40.0% |
| GTTATCATGTGTCCAGCTAA+TGG | - | chr3_2:88843022-88843041 | None:intergenic | 40.0% | |
| AGCTGGACACATGATAACAA+AGG | + | chr3_2:88843024-88843043 | Msa0435600:CDS | 40.0% | |
| GCAAAGGACATCACTTACTT+GGG | - | chr3_2:88843075-88843094 | None:intergenic | 40.0% | |
| AGCAAAGGACATCACTTACT+TGG | - | chr3_2:88843076-88843095 | None:intergenic | 40.0% | |
| TCCTTTGCTCACATTCTTTC+CGG | + | chr3_2:88843087-88843106 | Msa0435600:intron | 40.0% | |
| !! | TGATTGTTCTTGGTACTGGT+AGG | + | chr3_2:88843254-88843273 | Msa0435600:intron | 40.0% |
| ATACTGTAGAGATGGAGAAG+TGG | + | chr3_2:88843328-88843347 | Msa0435600:intron | 40.0% | |
| GGAGGAATTGTTACTGATGA+TGG | + | chr3_2:88843473-88843492 | Msa0435600:CDS | 40.0% | |
| TAGAAAACAAATACGGGGCA+GGG | - | chr3_2:88843651-88843670 | None:intergenic | 40.0% | |
| CCTCCTAGAAAACAAATACG+GGG | - | chr3_2:88843656-88843675 | None:intergenic | 40.0% | |
| GCCTCCTAGAAAACAAATAC+GGG | - | chr3_2:88843657-88843676 | None:intergenic | 40.0% | |
| AGTTTCTCTACTGATCCCAT+AGG | - | chr3_2:88843731-88843750 | None:intergenic | 40.0% | |
| TCCTCCTCTATATTAGCGAA+GGG | + | chr3_2:88844120-88844139 | Msa0435600:CDS | 40.0% | |
| AGTACATCTTTGTCAGACTC+TGG | - | chr3_2:88844386-88844405 | None:intergenic | 40.0% | |
| GTTACCATTTACAGCACATG+CGG | - | chr3_2:88844414-88844433 | None:intergenic | 40.0% | |
| ! | AATTGGCAGTTGATGCAACA+AGG | - | chr3_2:88844504-88844523 | None:intergenic | 40.0% |
| CATCAACTGCCAATTGACAT+TGG | + | chr3_2:88844509-88844528 | Msa0435600:CDS | 40.0% | |
| TTTACAAGCTTTCTGTCTCC+CGG | + | chr3_2:88844584-88844603 | Msa0435600:CDS | 40.0% | |
| ! | GTTTTTGTCCCCAGTAAAGA+TGG | + | chr3_2:88844924-88844943 | Msa0435600:CDS | 40.0% |
| TCTTGGTACCATCTTTACTG+GGG | - | chr3_2:88844935-88844954 | None:intergenic | 40.0% | |
| GATCTTGGTACCATCTTTAC+TGG | - | chr3_2:88844937-88844956 | None:intergenic | 40.0% | |
| CCGTGTCTGTTATATGGATA+TGG | + | chr3_2:88845005-88845024 | Msa0435600:CDS | 40.0% | |
| TACAATGCGACTAACACTGA+AGG | - | chr3_2:88845057-88845076 | None:intergenic | 40.0% | |
| TACTGCATTGCGAATATTCG+TGG | + | chr3_2:88845101-88845120 | Msa0435600:CDS | 40.0% | |
| GATGCATAACTTTCTGGGTT+GGG | - | chr3_2:88845237-88845256 | None:intergenic | 40.0% | |
| CCTTCGATGCATAACTTTCT+GGG | - | chr3_2:88845242-88845261 | None:intergenic | 40.0% | |
| ACCTTCGATGCATAACTTTC+TGG | - | chr3_2:88845243-88845262 | None:intergenic | 40.0% | |
| AGAAAGTTATGCATCGAAGG+TGG | + | chr3_2:88845242-88845261 | Msa0435600:CDS | 40.0% | |
| ! | TGTTGGTGCTTGCATAAATC+AGG | + | chr3_2:88845283-88845302 | Msa0435600:CDS | 40.0% |
| TCAGGTCTCTGTACAGATAA+AGG | - | chr3_2:88845392-88845411 | None:intergenic | 40.0% | |
| CGGTTCCACAAATTTACCAT+AGG | + | chr3_2:88845458-88845477 | Msa0435600:CDS | 40.0% | |
| ATTGTTACTCAGGTCATGCT+TGG | + | chr3_2:88845541-88845560 | Msa0435600:intron | 40.0% | |
| TTATGGTTGTGCAGACAAAG+AGG | + | chr3_2:88845572-88845591 | Msa0435600:CDS | 40.0% | |
| GAACAATTCCCATATGTGGA+TGG | + | chr3_2:88845772-88845791 | Msa0435600:intron | 40.0% | |
| ! | CTTTTCGTCCATCCACATAT+GGG | - | chr3_2:88845783-88845802 | None:intergenic | 40.0% |
| ATGATATCATGGACCAATGG+TGG | - | chr3_2:88846002-88846021 | None:intergenic | 40.0% | |
| GACATGATATCATGGACCAA+TGG | - | chr3_2:88846005-88846024 | None:intergenic | 40.0% | |
| ATGTGTAGCTTATGAACTCC+AGG | - | chr3_2:88846050-88846069 | None:intergenic | 40.0% | |
| TAAGCTACACATGCATGTTC+TGG | + | chr3_2:88846058-88846077 | Msa0435600:intron | 40.0% | |
| TGATAATTGTCATGCGACTG+TGG | - | chr3_2:88846153-88846172 | None:intergenic | 40.0% | |
| TCAGGTAAAGCATGAAAGAC+AGG | - | chr3_2:88846243-88846262 | None:intergenic | 40.0% | |
| TAACATCGAGATTCAGCTTC+AGG | - | chr3_2:88846261-88846280 | None:intergenic | 40.0% | |
| CAGATGAACCTCAAAATACG+AGG | - | chr3_2:88846423-88846442 | None:intergenic | 40.0% | |
| !!! | CTCGTATTTTGAGGTTCATC+TGG | + | chr3_2:88846421-88846440 | Msa0435600:intron | 40.0% |
| GATTGCTTTATGAACTCCTG+TGG | + | chr3_2:88846503-88846522 | Msa0435600:intron | 40.0% | |
| ACTCACCATTGCATAATGTC+CGG | + | chr3_2:88846598-88846617 | Msa0435600:CDS | 40.0% | |
| !! | GGGTATTGAATTGACTTGTC+AGG | - | chr3_2:88846642-88846661 | None:intergenic | 40.0% |
| CCGTCAACAACATAGTTGAT+GGG | - | chr3_2:88846662-88846681 | None:intergenic | 40.0% | |
| CCCATCAACTATGTTGTTGA+CGG | + | chr3_2:88846659-88846678 | Msa0435600:CDS | 40.0% | |
| ACACTCATTGAAGCTATTGG+CGG | + | chr3_2:88846710-88846729 | Msa0435600:CDS | 40.0% | |
| CAAATAGTTGTCACATAGGG+GGG | + | chr3_2:88846838-88846857 | Msa0435600:intron | 40.0% | |
| AAATAGTTGTCACATAGGGG+GGG | + | chr3_2:88846839-88846858 | Msa0435600:intron | 40.0% | |
| AGAGAAGAAAAGGAAAAGGG+TGG | - | chr3_2:88846928-88846947 | None:intergenic | 40.0% | |
| ACTACATAGCACATACTGCA+TGG | - | chr3_2:88846984-88847003 | None:intergenic | 40.0% | |
| GTATGTGCTATGTAGTAGCT+TGG | + | chr3_2:88846988-88847007 | Msa0435600:CDS | 40.0% | |
| AGATCGATGAAACTGCTGAT+CGG | + | chr3_2:88847174-88847193 | Msa0435600:intron | 40.0% | |
| ! | TGCTGATCGGTACAGTTTTA+TGG | + | chr3_2:88847187-88847206 | Msa0435600:CDS | 40.0% |
| TTCATTTGGGTATGGTAGCA+TGG | - | chr3_2:88847342-88847361 | None:intergenic | 40.0% | |
| TTACTTGCCTGTAAGCATTC+CGG | + | chr3_2:88847458-88847477 | Msa0435600:three_prime_UTR | 40.0% | |
| CCTTTCACTTCTTCAGCATC+AGG | - | chr3_2:88842010-88842029 | None:intergenic | 45.0% | |
| CCTGATGCTGAAGAAGTGAA+AGG | + | chr3_2:88842007-88842026 | Msa0435600:CDS | 45.0% | |
| AGAGAATGTCCTGTGCTTGA+AGG | - | chr3_2:88842189-88842208 | None:intergenic | 45.0% | |
| ACAGGACATTCTCTATGTCC+AGG | + | chr3_2:88842195-88842214 | Msa0435600:intron | 45.0% | |
| ! | AGTCGGATTTAGGGTCTGTT+TGG | + | chr3_2:88842284-88842303 | Msa0435600:intron | 45.0% |
| ! | TCATCTGATTCAGGGCCTTT+TGG | + | chr3_2:88842452-88842471 | Msa0435600:intron | 45.0% |
| TTTGGGTCAAGCAAAACCTG+TGG | - | chr3_2:88842744-88842763 | None:intergenic | 45.0% | |
| ! | CCATCTTCACTCAAGGCATT+TGG | - | chr3_2:88842762-88842781 | None:intergenic | 45.0% |
| CCAAATGCCTTGAGTGAAGA+TGG | + | chr3_2:88842759-88842778 | Msa0435600:intron | 45.0% | |
| GAGTGAAGATGCCAAGTACT+TGG | + | chr3_2:88842809-88842828 | Msa0435600:CDS | 45.0% | |
| AAGCGCATAAGCCAAGTACT+TGG | - | chr3_2:88842823-88842842 | None:intergenic | 45.0% | |
| ATCATGTGTCCAGCTAATGG+AGG | - | chr3_2:88843019-88843038 | None:intergenic | 45.0% | |
| TCCGGAAAGAATGTGAGCAA+AGG | - | chr3_2:88843091-88843110 | None:intergenic | 45.0% | |
| ATGGAGAAGTGGTAGATGCT+GGG | + | chr3_2:88843339-88843358 | Msa0435600:CDS | 45.0% | |
| !! | TTTTTGGGCACGGATCAATC+AGG | + | chr3_2:88843404-88843423 | Msa0435600:CDS | 45.0% |
| CTAGAAAACAAATACGGGGC+AGG | - | chr3_2:88843652-88843671 | None:intergenic | 45.0% | |
| !! | CTGCCCCGTATTTGTTTTCT+AGG | + | chr3_2:88843650-88843669 | Msa0435600:intron | 45.0% |
| !! | CCCCGTATTTGTTTTCTAGG+AGG | + | chr3_2:88843653-88843672 | Msa0435600:intron | 45.0% |
| CTCCTCCTCTATATTAGCGA+AGG | + | chr3_2:88844119-88844138 | Msa0435600:CDS | 45.0% | |
| ACCCTTCGCTAATATAGAGG+AGG | - | chr3_2:88844124-88844143 | None:intergenic | 45.0% | |
| CACACCCTTCGCTAATATAG+AGG | - | chr3_2:88844127-88844146 | None:intergenic | 45.0% | |
| AGAACATCAGCCCATGTGTT+TGG | - | chr3_2:88844362-88844381 | None:intergenic | 45.0% | |
| ! | TTGCACTGATAGACGATACC+GGG | - | chr3_2:88844605-88844624 | None:intergenic | 45.0% |
| ! | GTTGCACTGATAGACGATAC+CGG | - | chr3_2:88844606-88844625 | None:intergenic | 45.0% |
| TATCGTCTATCAGTGCAACC+TGG | + | chr3_2:88844607-88844626 | Msa0435600:CDS | 45.0% | |
| ATCGTCTATCAGTGCAACCT+GGG | + | chr3_2:88844608-88844627 | Msa0435600:CDS | 45.0% | |
| TTACGTGAAATTGCAGTCCC+TGG | + | chr3_2:88844656-88844675 | Msa0435600:CDS | 45.0% | |
| TACGTGAAATTGCAGTCCCT+GGG | + | chr3_2:88844657-88844676 | Msa0435600:CDS | 45.0% | |
| ! | CTCCGAGTTTCAAGTCAATC+AGG | + | chr3_2:88844688-88844707 | Msa0435600:CDS | 45.0% |
| GGGGACAAAAACCTGAAATG+TGG | - | chr3_2:88844916-88844935 | None:intergenic | 45.0% | |
| TCACACCCGTGTCTGTTATA+TGG | + | chr3_2:88844999-88845018 | Msa0435600:CDS | 45.0% | |
| ATGCGACTAACACTGAAGGA+TGG | - | chr3_2:88845053-88845072 | None:intergenic | 45.0% | |
| TGCATTGCGAATATTCGTGG+TGG | + | chr3_2:88845104-88845123 | Msa0435600:CDS | 45.0% | |
| ATTGCGAATATTCGTGGTGG+TGG | + | chr3_2:88845107-88845126 | Msa0435600:CDS | 45.0% | |
| !! | ATTCGTGGTGGTGGAGAATA+TGG | + | chr3_2:88845116-88845135 | Msa0435600:CDS | 45.0% |
| !! | TTCGTGGTGGTGGAGAATAT+GGG | + | chr3_2:88845117-88845136 | Msa0435600:CDS | 45.0% |
| GTGGAGAATATGGGGAAGAA+TGG | + | chr3_2:88845126-88845145 | Msa0435600:CDS | 45.0% | |
| TGGTGAATACCTTGTGTCCA+CGG | + | chr3_2:88845205-88845224 | Msa0435600:CDS | 45.0% | |
| CGATGCATAACTTTCTGGGT+TGG | - | chr3_2:88845238-88845257 | None:intergenic | 45.0% | |
| CCCAGAAAGTTATGCATCGA+AGG | + | chr3_2:88845239-88845258 | Msa0435600:CDS | 45.0% | |
| !! | AGCAATGGTGGACTTCTTGT+TGG | + | chr3_2:88845266-88845285 | Msa0435600:CDS | 45.0% |
| GTGCTTGCATAAATCAGGTC+TGG | + | chr3_2:88845288-88845307 | Msa0435600:intron | 45.0% | |
| ! | ATTGGCTCATGTTGGCGTTA+TGG | + | chr3_2:88845427-88845446 | Msa0435600:CDS | 45.0% |
| TTGGCGTTATGGACATGCTA+CGG | + | chr3_2:88845438-88845457 | Msa0435600:CDS | 45.0% | |
| CATGCTTGGACCTCAGATTA+TGG | + | chr3_2:88845555-88845574 | Msa0435600:CDS | 45.0% | |
| GTCTGCACAACCATAATCTG+AGG | - | chr3_2:88845568-88845587 | None:intergenic | 45.0% | |
| ! | GTAAGTGCTGTTAGTGGAAG+CGG | + | chr3_2:88845728-88845747 | Msa0435600:intron | 45.0% |
| ! | TAAGTGCTGTTAGTGGAAGC+GGG | + | chr3_2:88845729-88845748 | Msa0435600:intron | 45.0% |
| TGTTAGTGGAAGCGGGATAA+TGG | + | chr3_2:88845736-88845755 | Msa0435600:intron | 45.0% | |
| ! | CCTTTTCGTCCATCCACATA+TGG | - | chr3_2:88845784-88845803 | None:intergenic | 45.0% |
| CCATATGTGGATGGACGAAA+AGG | + | chr3_2:88845781-88845800 | Msa0435600:intron | 45.0% | |
| CTGTGAGACAATCCCTTTGT+TGG | + | chr3_2:88845936-88845955 | Msa0435600:intron | 45.0% | |
| TCTTAAGGGGAATGGTTGGT+TGG | + | chr3_2:88846309-88846328 | Msa0435600:intron | 45.0% | |
| TTCTAGCAGCATAGACTGCA+TGG | + | chr3_2:88846346-88846365 | Msa0435600:intron | 45.0% | |
| GAGAATCCTCAACTTATGCC+AGG | - | chr3_2:88846387-88846406 | None:intergenic | 45.0% | |
| GCCGTCAACAACATAGTTGA+TGG | - | chr3_2:88846663-88846682 | None:intergenic | 45.0% | |
| TTGAAGCTATTGGCGGTTAG+TGG | + | chr3_2:88846717-88846736 | Msa0435600:intron | 45.0% | |
| TGAAGCTATTGGCGGTTAGT+GGG | + | chr3_2:88846718-88846737 | Msa0435600:intron | 45.0% | |
| ! | ATGAGTTTTTCCTCCCACAG+TGG | - | chr3_2:88846887-88846906 | None:intergenic | 45.0% |
| ACTGCATGGTCTGCAACAAT+TGG | - | chr3_2:88846970-88846989 | None:intergenic | 45.0% | |
| ATTGACTGCAAAGCTGGACA+TGG | + | chr3_2:88847046-88847065 | Msa0435600:CDS | 45.0% | |
| GGGTCGTCCAACAAAGAAAA+TGG | + | chr3_2:88847072-88847091 | Msa0435600:CDS | 45.0% | |
| !!! | AAAATTTAAGTTAAATAAAT+TGG | - | chr3_2:88842404-88842423 | None:intergenic | 5.0% |
| AAATCGCCGACCCTTATCGA+TGG | + | chr3_2:88841884-88841903 | Msa0435600:CDS | 50.0% | |
| GTGCTTGAAGGCCAGTGTTA+TGG | - | chr3_2:88842177-88842196 | None:intergenic | 50.0% | |
| !! | TAACACTGGCCTTCAAGCAC+AGG | + | chr3_2:88842177-88842196 | Msa0435600:intron | 50.0% |
| TAGTTTGGAGGGAGAACCAC+AGG | + | chr3_2:88842725-88842744 | Msa0435600:intron | 50.0% | |
| GCTTATGCGCTTAGTTCCAG+TGG | + | chr3_2:88842831-88842850 | Msa0435600:CDS | 50.0% | |
| !! | CTTACTTGGGTGCTGGATAG+CGG | - | chr3_2:88843062-88843081 | None:intergenic | 50.0% |
| GACATCACTTACTTGGGTGC+TGG | - | chr3_2:88843069-88843088 | None:intergenic | 50.0% | |
| GATGGAGAAGTGGTAGATGC+TGG | + | chr3_2:88843338-88843357 | Msa0435600:CDS | 50.0% | |
| GAGTCCGCATGTGCTGTAAA+TGG | + | chr3_2:88844407-88844426 | Msa0435600:CDS | 50.0% | |
| TGCACGGCGTGAAGATAATG+TGG | + | chr3_2:88844550-88844569 | Msa0435600:CDS | 50.0% | |
| TATCAGTGCAACCTGGGAAC+AGG | + | chr3_2:88844614-88844633 | Msa0435600:CDS | 50.0% | |
| ATCAGTGCAACCTGGGAACA+GGG | + | chr3_2:88844615-88844634 | Msa0435600:CDS | 50.0% | |
| ACAGTGAGGACATGCAGCAT+CGG | - | chr3_2:88844728-88844747 | None:intergenic | 50.0% | |
| CCTGTACCCATGCAGACTAA+AGG | - | chr3_2:88844834-88844853 | None:intergenic | 50.0% | |
| CCTTTAGTCTGCATGGGTAC+AGG | + | chr3_2:88844831-88844850 | Msa0435600:intron | 50.0% | |
| !! | TCGTGGTGGTGGAGAATATG+GGG | + | chr3_2:88845118-88845137 | Msa0435600:CDS | 50.0% |
| GGGGAAGAATGGCATAAAGC+AGG | + | chr3_2:88845137-88845156 | Msa0435600:CDS | 50.0% | |
| GGTGAATACCTTGTGTCCAC+GGG | + | chr3_2:88845206-88845225 | Msa0435600:CDS | 50.0% | |
| TGCATCGAAGGTGGAAGCAA+TGG | + | chr3_2:88845251-88845270 | Msa0435600:CDS | 50.0% | |
| ATCGAAGGTGGAAGCAATGG+TGG | + | chr3_2:88845254-88845273 | Msa0435600:CDS | 50.0% | |
| ! | TGGGAAGTGTGGCCTAGAAA+TGG | - | chr3_2:88845332-88845351 | None:intergenic | 50.0% |
| GAGCTGTTGAATGGGAAGTG+TGG | - | chr3_2:88845343-88845362 | None:intergenic | 50.0% | |
| GTACAGAGACCTGAGCTCTT+TGG | + | chr3_2:88845398-88845417 | Msa0435600:intron | 50.0% | |
| AATGCACAGCCAAAGAGCTC+AGG | - | chr3_2:88845410-88845429 | None:intergenic | 50.0% | |
| TGAGCTCTTTGGCTGTGCAT+TGG | + | chr3_2:88845409-88845428 | Msa0435600:CDS | 50.0% | |
| TTGTCAGGATGCTGTTCCCA+TGG | - | chr3_2:88846627-88846646 | None:intergenic | 50.0% | |
| TCATTCTCGTGTGACCACTG+TGG | + | chr3_2:88846870-88846889 | Msa0435600:intron | 50.0% | |
| CATTCTCGTGTGACCACTGT+GGG | + | chr3_2:88846871-88846890 | Msa0435600:intron | 50.0% | |
| !! | TGTCGCATTGACTGCAAAGC+TGG | + | chr3_2:88847040-88847059 | Msa0435600:CDS | 50.0% |
| CGAACCTCTGCAATATCCCG+CGG | + | chr3_2:88841819-88841838 | Msa0435600:CDS | 55.0% | |
| AGTCGCCCAATCACTACCAC+TGG | - | chr3_2:88842850-88842869 | None:intergenic | 55.0% | |
| ACTCGGAGCGATCAAACCCA+GGG | - | chr3_2:88844676-88844695 | None:intergenic | 55.0% | |
| AACTCGGAGCGATCAAACCC+AGG | - | chr3_2:88844677-88844696 | None:intergenic | 55.0% | |
| GGGTATAACCCGTGGACACA+AGG | - | chr3_2:88845217-88845236 | None:intergenic | 55.0% | |
| ! | TCTGGGTTGGGTATAACCCG+TGG | - | chr3_2:88845225-88845244 | None:intergenic | 55.0% |
| !! | GGCTGTGCATTGGCTCATGT+TGG | + | chr3_2:88845419-88845438 | Msa0435600:CDS | 55.0% |
| ! | AGTGGAAGCGGGATAATGGC+AGG | + | chr3_2:88845740-88845759 | Msa0435600:intron | 55.0% |
| ! | GTGGAAGCGGGATAATGGCA+GGG | + | chr3_2:88845741-88845760 | Msa0435600:intron | 55.0% |
| GGTCGCCGGACATTATGCAA+TGG | - | chr3_2:88846606-88846625 | None:intergenic | 55.0% | |
| TGCATAATGTCCGGCGACCA+TGG | + | chr3_2:88846607-88846626 | Msa0435600:CDS | 55.0% | |
| GCATAATGTCCGGCGACCAT+GGG | + | chr3_2:88846608-88846627 | Msa0435600:CDS | 55.0% | |
| GTTGTCACATAGGGGGGGAT+AGG | + | chr3_2:88846844-88846863 | Msa0435600:intron | 55.0% | |
| GGGTGGTAAATTGCGACGAC+TGG | - | chr3_2:88846911-88846930 | None:intergenic | 55.0% | |
| CTGCAAAGCTGGACATGGAG+CGG | + | chr3_2:88847051-88847070 | Msa0435600:CDS | 55.0% | |
| TGCAAAGCTGGACATGGAGC+GGG | + | chr3_2:88847052-88847071 | Msa0435600:CDS | 55.0% | |
| !! | GGTCGGCGATTTTGACGCCA+TGG | - | chr3_2:88841876-88841895 | None:intergenic | 60.0% |
| GATCAGGAGTCCCTGTTCCC+AGG | - | chr3_2:88844628-88844647 | None:intergenic | 60.0% | |
| ! | AGCGGGATAATGGCAGGGTC+CGG | + | chr3_2:88845746-88845765 | Msa0435600:intron | 60.0% |
| GATGCTGTTCCCATGGTCGC+CGG | - | chr3_2:88846620-88846639 | None:intergenic | 60.0% | |
| TCTCGTGTGACCACTGTGGG+AGG | + | chr3_2:88846874-88846893 | Msa0435600:intron | 60.0% | |
| CGAGCCGCGGGATATTGCAG+AGG | - | chr3_2:88841826-88841845 | None:intergenic | 65.0% | |
| AGAGTCGTCTCTGCGAGCCG+CGG | - | chr3_2:88841839-88841858 | None:intergenic | 65.0% | |
| GAGTCGTCTCTGCGAGCCGC+GGG | - | chr3_2:88841838-88841857 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_2 | gene | 88841696 | 88847566 | 88841696 | ID=Msa0435600;Name=Msa0435600 |
| chr3_2 | mRNA | 88841696 | 88847566 | 88841696 | ID=Msa0435600-mRNA-1;Parent=Msa0435600;Name=Msa0435600-mRNA-1;_AED=0.08;_eAED=0.08;_QI=109|0.90|0.83|1|1|1|12|325|681 |
| chr3_2 | exon | 88841696 | 88841905 | 88841696 | ID=Msa0435600-mRNA-1:exon:26218;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88841997 | 88842130 | 88841997 | ID=Msa0435600-mRNA-1:exon:26219;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88842778 | 88842923 | 88842778 | ID=Msa0435600-mRNA-1:exon:26220;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88843006 | 88843076 | 88843006 | ID=Msa0435600-mRNA-1:exon:26221;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88843337 | 88843499 | 88843337 | ID=Msa0435600-mRNA-1:exon:26222;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88844116 | 88844709 | 88844116 | ID=Msa0435600-mRNA-1:exon:26223;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88844924 | 88845304 | 88844924 | ID=Msa0435600-mRNA-1:exon:26224;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88845404 | 88845479 | 88845404 | ID=Msa0435600-mRNA-1:exon:26225;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88845553 | 88845616 | 88845553 | ID=Msa0435600-mRNA-1:exon:26226;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88846596 | 88846731 | 88846596 | ID=Msa0435600-mRNA-1:exon:26227;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88846980 | 88847093 | 88846980 | ID=Msa0435600-mRNA-1:exon:26228;Parent=Msa0435600-mRNA-1 |
| chr3_2 | exon | 88847176 | 88847566 | 88847176 | ID=Msa0435600-mRNA-1:exon:26229;Parent=Msa0435600-mRNA-1 |
| chr3_2 | five_prime_UTR | 88841696 | 88841804 | 88841696 | ID=Msa0435600-mRNA-1:five_prime_utr;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88841805 | 88841905 | 88841805 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88841997 | 88842130 | 88841997 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88842778 | 88842923 | 88842778 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88843006 | 88843076 | 88843006 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88843337 | 88843499 | 88843337 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88844116 | 88844709 | 88844116 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88844924 | 88845304 | 88844924 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88845404 | 88845479 | 88845404 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88845553 | 88845616 | 88845553 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88846596 | 88846731 | 88846596 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88846980 | 88847093 | 88846980 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | CDS | 88847176 | 88847241 | 88847176 | ID=Msa0435600-mRNA-1:cds;Parent=Msa0435600-mRNA-1 |
| chr3_2 | three_prime_UTR | 88847242 | 88847566 | 88847242 | ID=Msa0435600-mRNA-1:three_prime_utr;Parent=Msa0435600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
