Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187350 | XP_013447134.1 | 97.096 | 861 | 22 | 2 | 1 | 859 | 1 | 860 | 0.0 | 1714 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187350 | sp|Q9P7J5|YJNA_SCHPO | 49.402 | 251 | 123 | 3 | 515 | 763 | 68 | 316 | 5.48e-72 | 243 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187350 | A0A072TVF1 | 97.096 | 861 | 22 | 2 | 1 | 859 | 1 | 860 | 0.0 | 1714 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0187350 | Msa0374230 | -0.800453 | 1.431156e-48 | -8.615850e-47 |
Msa0187350 | Msa0433050 | 0.810233 | 1.276254e-50 | -8.615850e-47 |
Msa0187350 | Msa0524670 | 0.802773 | 4.785104e-49 | -8.615850e-47 |
Msa0187350 | Msa0526250 | 0.946318 | 5.797418e-105 | -8.615850e-47 |
Msa0187350 | Msa0572220 | 0.887793 | 1.044320e-72 | -8.615850e-47 |
Msa0187350 | Msa0572250 | 0.991599 | 1.641076e-188 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187350 | MtrunA17_Chr8g0387641 | 95.587 | 861 | 22 | 3 | 1 | 859 | 1 | 847 | 0.0 | 1677 |
Msa0187350 | MtrunA17_Chr5g0397121 | 76.484 | 859 | 171 | 9 | 1 | 859 | 1 | 828 | 0.0 | 1298 |
Msa0187350 | MtrunA17_Chr6g0462581 | 64.458 | 830 | 252 | 10 | 30 | 859 | 27 | 813 | 0.0 | 1035 |
Msa0187350 | MtrunA17_Chr1g0202381 | 51.339 | 859 | 314 | 11 | 3 | 859 | 29 | 785 | 0.0 | 813 |
Msa0187350 | MtrunA17_Chr3g0116131 | 42.284 | 648 | 250 | 9 | 252 | 859 | 644 | 1207 | 1.44e-159 | 497 |
Msa0187350 | MtrunA17_Chr3g0116131 | 47.059 | 102 | 52 | 1 | 42 | 141 | 371 | 472 | 4.81e-21 | 99.4 |
Msa0187350 | MtrunA17_Chr1g0195731 | 40.678 | 649 | 256 | 8 | 253 | 859 | 678 | 1239 | 2.19e-152 | 479 |
Msa0187350 | MtrunA17_Chr1g0195731 | 35.260 | 173 | 93 | 4 | 60 | 226 | 423 | 582 | 1.38e-18 | 91.7 |
Msa0187350 | MtrunA17_Chr1g0202371 | 66.667 | 351 | 103 | 6 | 511 | 859 | 375 | 713 | 2.41e-151 | 461 |
Msa0187350 | MtrunA17_Chr1g0202371 | 40.625 | 448 | 177 | 7 | 1 | 444 | 1 | 363 | 4.65e-98 | 322 |
Msa0187350 | MtrunA17_Chr1g0204031 | 65.616 | 349 | 107 | 5 | 513 | 859 | 537 | 874 | 4.25e-146 | 453 |
Msa0187350 | MtrunA17_Chr1g0195741 | 59.605 | 354 | 114 | 3 | 510 | 859 | 915 | 1243 | 3.68e-136 | 436 |
Msa0187350 | MtrunA17_Chr1g0195741 | 25.893 | 224 | 125 | 4 | 251 | 436 | 680 | 900 | 1.19e-18 | 91.7 |
Msa0187350 | MtrunA17_Chr1g0195741 | 30.939 | 181 | 102 | 6 | 50 | 226 | 424 | 585 | 1.59e-16 | 84.7 |
Msa0187350 | MtrunA17_Chr4g0038101 | 37.640 | 627 | 299 | 12 | 249 | 857 | 461 | 1013 | 2.33e-119 | 386 |
Msa0187350 | MtrunA17_Chr4g0038101 | 42.105 | 95 | 52 | 3 | 50 | 141 | 163 | 257 | 2.30e-11 | 67.8 |
Msa0187350 | MtrunA17_Chr3g0127401 | 55.777 | 251 | 109 | 2 | 515 | 764 | 63 | 312 | 1.47e-89 | 288 |
Msa0187350 | MtrunA17_Chr3g0127431 | 56.175 | 251 | 108 | 2 | 515 | 764 | 66 | 315 | 3.82e-89 | 288 |
Msa0187350 | MtrunA17_Chr6g0459561 | 41.092 | 348 | 149 | 10 | 513 | 845 | 352 | 658 | 2.92e-69 | 242 |
Msa0187350 | MtrunA17_Chr6g0459541 | 37.903 | 372 | 152 | 12 | 513 | 845 | 12 | 343 | 3.81e-65 | 222 |
Msa0187350 | MtrunA17_Chr4g0004121 | 41.438 | 292 | 161 | 5 | 477 | 760 | 185 | 474 | 8.89e-63 | 221 |
Msa0187350 | MtrunA17_Chr7g0246111 | 47.807 | 228 | 116 | 3 | 533 | 759 | 212 | 437 | 1.25e-61 | 217 |
Msa0187350 | MtrunA17_Chr4g0052271 | 44.030 | 268 | 139 | 5 | 500 | 762 | 86 | 347 | 7.55e-61 | 212 |
Msa0187350 | MtrunA17_Chr2g0321241 | 43.860 | 228 | 125 | 3 | 532 | 758 | 131 | 356 | 1.04e-56 | 201 |
Msa0187350 | MtrunA17_Chr4g0026631 | 44.737 | 228 | 123 | 3 | 532 | 758 | 126 | 351 | 1.33e-56 | 201 |
Msa0187350 | MtrunA17_Chr6g0459551 | 36.631 | 374 | 152 | 12 | 513 | 844 | 72 | 402 | 2.49e-55 | 197 |
Msa0187350 | MtrunA17_Chr1g0180791 | 39.916 | 238 | 138 | 3 | 532 | 767 | 204 | 438 | 4.48e-47 | 181 |
Msa0187350 | MtrunA17_Chr1g0180791 | 34.572 | 269 | 162 | 6 | 532 | 796 | 477 | 735 | 2.59e-46 | 178 |
Msa0187350 | MtrunA17_Chr7g0264521 | 36.992 | 246 | 145 | 5 | 532 | 773 | 478 | 717 | 7.03e-47 | 180 |
Msa0187350 | MtrunA17_Chr7g0264521 | 39.669 | 242 | 140 | 4 | 529 | 767 | 201 | 439 | 1.16e-46 | 179 |
Msa0187350 | MtrunA17_Chr2g0327121 | 36.992 | 246 | 145 | 5 | 532 | 773 | 479 | 718 | 4.06e-46 | 177 |
Msa0187350 | MtrunA17_Chr2g0327121 | 38.376 | 271 | 152 | 5 | 505 | 767 | 177 | 440 | 1.02e-44 | 173 |
Msa0187350 | MtrunA17_Chr6g0459531 | 35.077 | 325 | 139 | 9 | 528 | 845 | 57 | 316 | 5.74e-46 | 167 |
Msa0187350 | MtrunA17_Chr7g0255721 | 38.400 | 250 | 142 | 4 | 519 | 758 | 664 | 911 | 3.21e-44 | 172 |
Msa0187350 | MtrunA17_Chr7g0255721 | 27.299 | 348 | 233 | 9 | 511 | 852 | 366 | 699 | 1.19e-29 | 127 |
Msa0187350 | MtrunA17_Chr7g0217421 | 39.834 | 241 | 138 | 5 | 533 | 769 | 39 | 276 | 4.27e-44 | 164 |
Msa0187350 | MtrunA17_Chr7g0255641 | 35.606 | 264 | 160 | 4 | 533 | 788 | 658 | 919 | 7.52e-44 | 171 |
Msa0187350 | MtrunA17_Chr7g0255641 | 38.172 | 186 | 105 | 6 | 572 | 753 | 432 | 611 | 9.83e-29 | 124 |
Msa0187350 | MtrunA17_Chr8g0362771 | 37.500 | 280 | 160 | 7 | 519 | 792 | 227 | 497 | 2.39e-43 | 168 |
Msa0187350 | MtrunA17_Chr3g0145011 | 36.220 | 254 | 150 | 5 | 532 | 776 | 138 | 388 | 3.14e-43 | 162 |
Msa0187350 | MtrunA17_Chr3g0135761 | 41.200 | 250 | 137 | 6 | 524 | 769 | 213 | 456 | 4.33e-43 | 167 |
Msa0187350 | MtrunA17_Chr3g0141901 | 35.827 | 254 | 151 | 5 | 532 | 776 | 135 | 385 | 1.01e-42 | 160 |
Msa0187350 | MtrunA17_Chr3g0135721 | 40.400 | 250 | 139 | 6 | 524 | 769 | 215 | 458 | 1.45e-42 | 166 |
Msa0187350 | MtrunA17_Chr8g0345461 | 36.957 | 230 | 139 | 3 | 532 | 757 | 164 | 391 | 4.76e-42 | 159 |
Msa0187350 | MtrunA17_Chr3g0143721 | 36.131 | 274 | 164 | 5 | 530 | 795 | 246 | 516 | 4.92e-41 | 161 |
Msa0187350 | MtrunA17_Chr4g0050561 | 36.910 | 233 | 138 | 5 | 532 | 758 | 155 | 384 | 1.82e-40 | 154 |
Msa0187350 | MtrunA17_Chr7g0255651 | 37.288 | 236 | 142 | 3 | 533 | 764 | 282 | 515 | 5.54e-40 | 156 |
Msa0187350 | MtrunA17_Chr7g0255651 | 29.952 | 207 | 135 | 5 | 558 | 757 | 38 | 241 | 8.37e-16 | 81.6 |
Msa0187350 | MtrunA17_Chr1g0200081 | 36.522 | 230 | 139 | 4 | 532 | 757 | 174 | 400 | 1.30e-39 | 152 |
Msa0187350 | MtrunA17_Chr1g0182711 | 35.217 | 230 | 141 | 4 | 534 | 758 | 189 | 415 | 3.12e-39 | 151 |
Msa0187350 | MtrunA17_Chr7g0262801 | 35.217 | 230 | 141 | 4 | 534 | 758 | 188 | 414 | 4.64e-39 | 151 |
Msa0187350 | MtrunA17_Chr3g0104211 | 41.667 | 228 | 121 | 6 | 533 | 752 | 304 | 527 | 8.49e-39 | 155 |
Msa0187350 | MtrunA17_Chr1g0192151 | 35.683 | 227 | 140 | 3 | 535 | 757 | 169 | 393 | 1.32e-38 | 149 |
Msa0187350 | MtrunA17_Chr4g0014731 | 35.683 | 227 | 140 | 3 | 535 | 757 | 170 | 394 | 1.69e-38 | 149 |
Msa0187350 | MtrunA17_Chr4g0052411 | 39.286 | 224 | 129 | 5 | 533 | 752 | 229 | 449 | 1.76e-38 | 153 |
Msa0187350 | MtrunA17_Chr5g0429571 | 40.088 | 227 | 126 | 5 | 533 | 752 | 313 | 536 | 2.38e-38 | 154 |
Msa0187350 | MtrunA17_Chr5g0432631 | 37.255 | 255 | 150 | 6 | 519 | 769 | 215 | 463 | 4.70e-38 | 153 |
Msa0187350 | MtrunA17_Chr2g0297281 | 39.286 | 224 | 129 | 5 | 533 | 752 | 286 | 506 | 5.26e-38 | 152 |
Msa0187350 | MtrunA17_Chr7g0255901 | 37.004 | 227 | 136 | 6 | 532 | 753 | 638 | 862 | 8.80e-38 | 152 |
Msa0187350 | MtrunA17_Chr7g0248361 | 37.931 | 232 | 134 | 5 | 533 | 757 | 192 | 420 | 1.75e-37 | 149 |
Msa0187350 | MtrunA17_Chr3g0094871 | 36.364 | 231 | 138 | 5 | 533 | 757 | 11 | 238 | 4.56e-37 | 145 |
Msa0187350 | MtrunA17_Chr4g0031821 | 36.638 | 232 | 137 | 5 | 533 | 757 | 320 | 548 | 1.58e-36 | 148 |
Msa0187350 | MtrunA17_Chr4g0033451 | 38.655 | 238 | 135 | 5 | 533 | 762 | 380 | 614 | 2.96e-36 | 148 |
Msa0187350 | MtrunA17_Chr2g0277831 | 33.754 | 317 | 183 | 9 | 535 | 845 | 245 | 540 | 3.03e-36 | 147 |
Msa0187350 | MtrunA17_Chr2g0277831 | 33.482 | 224 | 142 | 4 | 532 | 751 | 532 | 752 | 8.86e-35 | 142 |
Msa0187350 | MtrunA17_Chr6g0456351 | 39.301 | 229 | 131 | 5 | 533 | 757 | 317 | 541 | 4.97e-36 | 145 |
Msa0187350 | MtrunA17_Chr7g0260601 | 36.638 | 232 | 137 | 5 | 533 | 757 | 240 | 468 | 5.44e-36 | 145 |
Msa0187350 | MtrunA17_Chr1g0158881 | 38.934 | 244 | 137 | 7 | 519 | 758 | 316 | 551 | 5.97e-36 | 146 |
Msa0187350 | MtrunA17_Chr6g0476861 | 35.345 | 232 | 140 | 5 | 533 | 757 | 197 | 425 | 2.22e-34 | 140 |
Msa0187350 | MtrunA17_Chr3g0086411 | 32.083 | 240 | 140 | 6 | 532 | 751 | 214 | 450 | 3.60e-34 | 137 |
Msa0187350 | MtrunA17_Chr3g0086411 | 27.273 | 231 | 143 | 5 | 621 | 843 | 7 | 220 | 1.65e-15 | 80.5 |
Msa0187350 | MtrunA17_Chr3g0108321 | 41.176 | 187 | 102 | 4 | 532 | 714 | 158 | 340 | 1.11e-33 | 133 |
Msa0187350 | MtrunA17_Chr2g0327231 | 40.854 | 164 | 93 | 3 | 532 | 693 | 345 | 506 | 1.33e-33 | 136 |
Msa0187350 | MtrunA17_Chr2g0327231 | 35.821 | 134 | 67 | 4 | 532 | 664 | 152 | 267 | 4.14e-14 | 75.9 |
Msa0187350 | MtrunA17_Chr5g0432641 | 38.494 | 239 | 137 | 6 | 524 | 758 | 182 | 414 | 2.49e-33 | 137 |
Msa0187350 | MtrunA17_Chr7g0255691 | 35.146 | 239 | 149 | 3 | 533 | 767 | 286 | 522 | 4.67e-33 | 135 |
Msa0187350 | MtrunA17_Chr7g0255691 | 34.513 | 226 | 128 | 8 | 538 | 751 | 22 | 239 | 3.64e-25 | 110 |
Msa0187350 | MtrunA17_Chr2g0331161 | 31.313 | 297 | 177 | 9 | 531 | 816 | 413 | 693 | 1.59e-32 | 135 |
Msa0187350 | MtrunA17_Chr4g0043381 | 32.456 | 228 | 149 | 3 | 535 | 760 | 839 | 1063 | 2.41e-32 | 135 |
Msa0187350 | MtrunA17_Chr3g0086401 | 34.016 | 244 | 132 | 7 | 532 | 751 | 384 | 622 | 2.95e-31 | 130 |
Msa0187350 | MtrunA17_Chr3g0086401 | 31.333 | 300 | 169 | 8 | 556 | 843 | 116 | 390 | 1.37e-28 | 122 |
Msa0187350 | MtrunA17_Chr2g0289231 | 32.258 | 248 | 147 | 7 | 532 | 767 | 296 | 534 | 5.02e-30 | 126 |
Msa0187350 | MtrunA17_Chr8g0388371 | 34.034 | 238 | 142 | 4 | 533 | 758 | 404 | 638 | 1.14e-29 | 126 |
Msa0187350 | MtrunA17_Chr3g0129971 | 32.895 | 304 | 180 | 10 | 504 | 787 | 262 | 561 | 1.48e-29 | 126 |
Msa0187350 | MtrunA17_Chr8g0357301 | 32.576 | 264 | 140 | 8 | 538 | 771 | 462 | 717 | 1.91e-29 | 126 |
Msa0187350 | MtrunA17_Chr1g0204051 | 68.421 | 76 | 23 | 1 | 662 | 737 | 1 | 75 | 2.67e-29 | 111 |
Msa0187350 | MtrunA17_Chr2g0316851 | 32.271 | 251 | 154 | 7 | 535 | 774 | 596 | 841 | 3.15e-29 | 126 |
Msa0187350 | MtrunA17_Chr3g0135781 | 41.176 | 170 | 92 | 5 | 527 | 694 | 49 | 212 | 6.10e-28 | 112 |
Msa0187350 | MtrunA17_Chr4g0047411 | 33.036 | 224 | 121 | 9 | 567 | 770 | 210 | 424 | 6.00e-20 | 95.1 |
Msa0187350 | MtrunA17_Chr1g0168321 | 34.839 | 155 | 92 | 4 | 610 | 757 | 203 | 355 | 9.91e-20 | 93.6 |
Msa0187350 | MtrunA17_Chr1g0190401 | 33.333 | 234 | 128 | 11 | 516 | 736 | 667 | 885 | 1.61e-18 | 91.3 |
Msa0187350 | MtrunA17_Chr4g0039781 | 32.680 | 153 | 97 | 3 | 569 | 720 | 368 | 515 | 5.16e-16 | 82.4 |
Msa0187350 | MtrunA17_Chr6g0450161 | 28.502 | 207 | 118 | 5 | 569 | 750 | 362 | 563 | 6.18e-16 | 82.0 |
Msa0187350 | MtrunA17_Chr4g0062081 | 45.570 | 79 | 42 | 1 | 536 | 613 | 10 | 88 | 6.10e-15 | 71.2 |
Msa0187350 | MtrunA17_Chr5g0404291 | 34.028 | 144 | 87 | 4 | 569 | 710 | 387 | 524 | 2.96e-14 | 77.0 |
Msa0187350 | MtrunA17_Chr5g0432391 | 32.886 | 149 | 93 | 4 | 612 | 757 | 82 | 226 | 7.17e-14 | 74.7 |
Msa0187350 | MtrunA17_Chr3g0116941 | 29.697 | 165 | 97 | 4 | 571 | 718 | 197 | 359 | 1.34e-12 | 70.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0187350 | AT1G64110.2 | 72.010 | 836 | 199 | 9 | 28 | 859 | 25 | 829 | 0.0 | 1198 |
Msa0187350 | AT1G64110.4 | 72.010 | 836 | 199 | 9 | 28 | 859 | 25 | 829 | 0.0 | 1198 |
Msa0187350 | AT1G64110.1 | 72.010 | 836 | 199 | 9 | 28 | 859 | 20 | 824 | 0.0 | 1197 |
Msa0187350 | AT1G64110.5 | 72.010 | 836 | 197 | 9 | 28 | 859 | 25 | 827 | 0.0 | 1196 |
Msa0187350 | AT1G64110.3 | 72.010 | 836 | 197 | 9 | 28 | 859 | 25 | 827 | 0.0 | 1196 |
Msa0187350 | AT4G28000.1 | 66.356 | 859 | 260 | 11 | 1 | 859 | 1 | 830 | 0.0 | 1113 |
Msa0187350 | AT4G28000.2 | 66.047 | 860 | 263 | 11 | 1 | 859 | 1 | 832 | 0.0 | 1110 |
Msa0187350 | AT5G52882.1 | 66.163 | 860 | 259 | 11 | 1 | 859 | 1 | 829 | 0.0 | 1071 |
Msa0187350 | AT4G28000.3 | 65.291 | 824 | 257 | 11 | 1 | 823 | 1 | 796 | 0.0 | 1045 |
Msa0187350 | AT4G02480.1 | 42.040 | 647 | 255 | 10 | 252 | 859 | 700 | 1265 | 1.70e-152 | 480 |
Msa0187350 | AT4G02480.1 | 40.000 | 85 | 48 | 2 | 60 | 141 | 450 | 534 | 2.84e-12 | 71.2 |
Msa0187350 | AT1G02890.1 | 59.375 | 352 | 118 | 4 | 510 | 859 | 918 | 1246 | 1.85e-133 | 429 |
Msa0187350 | AT1G02890.1 | 25.532 | 235 | 136 | 1 | 252 | 447 | 680 | 914 | 1.25e-22 | 105 |
Msa0187350 | AT1G02890.1 | 37.594 | 133 | 73 | 5 | 39 | 167 | 406 | 532 | 4.89e-13 | 73.9 |
Msa0187350 | AT4G24860.4 | 58.382 | 346 | 121 | 3 | 514 | 858 | 771 | 1094 | 2.45e-122 | 396 |
Msa0187350 | AT4G24860.4 | 28.358 | 201 | 125 | 3 | 253 | 436 | 557 | 755 | 4.85e-19 | 93.2 |
Msa0187350 | AT4G24860.4 | 50.000 | 84 | 40 | 1 | 60 | 141 | 305 | 388 | 1.81e-16 | 85.1 |
Msa0187350 | AT4G24860.2 | 57.345 | 354 | 128 | 3 | 506 | 858 | 786 | 1117 | 2.46e-122 | 397 |
Msa0187350 | AT4G24860.2 | 28.358 | 201 | 125 | 3 | 253 | 436 | 580 | 778 | 4.99e-19 | 93.2 |
Msa0187350 | AT4G24860.2 | 50.000 | 84 | 40 | 1 | 60 | 141 | 305 | 388 | 1.92e-16 | 84.7 |
Msa0187350 | AT4G24860.1 | 57.345 | 354 | 128 | 3 | 506 | 858 | 790 | 1121 | 3.37e-122 | 397 |
Msa0187350 | AT4G24860.1 | 28.358 | 201 | 125 | 3 | 253 | 436 | 584 | 782 | 6.41e-19 | 92.8 |
Msa0187350 | AT4G24860.1 | 50.000 | 84 | 40 | 1 | 60 | 141 | 296 | 379 | 1.93e-16 | 84.7 |
Msa0187350 | AT4G24860.3 | 58.382 | 346 | 121 | 3 | 514 | 858 | 796 | 1119 | 4.25e-122 | 396 |
Msa0187350 | AT4G24860.3 | 28.643 | 199 | 125 | 3 | 253 | 436 | 584 | 780 | 4.28e-19 | 93.6 |
Msa0187350 | AT4G24860.3 | 50.000 | 84 | 40 | 1 | 60 | 141 | 296 | 379 | 2.11e-16 | 84.7 |
Msa0187350 | AT1G50140.2 | 36.210 | 649 | 278 | 12 | 249 | 857 | 429 | 981 | 7.22e-119 | 384 |
Msa0187350 | AT1G50140.5 | 36.210 | 649 | 278 | 12 | 249 | 857 | 429 | 981 | 7.22e-119 | 384 |
Msa0187350 | AT1G50140.3 | 36.210 | 649 | 278 | 12 | 249 | 857 | 451 | 1003 | 1.18e-118 | 384 |
Msa0187350 | AT1G50140.1 | 36.210 | 649 | 278 | 12 | 249 | 857 | 451 | 1003 | 1.18e-118 | 384 |
Msa0187350 | AT1G50140.4 | 36.210 | 649 | 278 | 12 | 249 | 857 | 451 | 1003 | 1.18e-118 | 384 |
Msa0187350 | AT1G02890.2 | 53.977 | 352 | 109 | 5 | 510 | 859 | 918 | 1218 | 1.49e-111 | 370 |
Msa0187350 | AT1G02890.2 | 25.532 | 235 | 136 | 1 | 252 | 447 | 680 | 914 | 1.23e-22 | 105 |
Msa0187350 | AT1G02890.2 | 37.594 | 133 | 73 | 5 | 39 | 167 | 406 | 532 | 4.53e-13 | 73.9 |
Msa0187350 | AT3G19740.1 | 48.446 | 386 | 165 | 3 | 473 | 857 | 641 | 993 | 1.13e-109 | 360 |
Msa0187350 | AT1G62130.2 | 49.046 | 367 | 147 | 7 | 496 | 859 | 707 | 1036 | 2.48e-98 | 330 |
Msa0187350 | AT1G62130.2 | 28.861 | 395 | 230 | 11 | 60 | 411 | 304 | 690 | 1.30e-32 | 137 |
Msa0187350 | AT1G62130.1 | 49.046 | 367 | 147 | 7 | 496 | 859 | 714 | 1043 | 3.76e-98 | 330 |
Msa0187350 | AT1G62130.1 | 28.302 | 159 | 113 | 1 | 253 | 411 | 540 | 697 | 2.96e-17 | 87.4 |
Msa0187350 | AT1G62130.1 | 46.512 | 86 | 42 | 2 | 60 | 141 | 304 | 389 | 3.64e-14 | 77.4 |
Msa0187350 | AT4G27680.1 | 54.582 | 251 | 112 | 2 | 515 | 764 | 63 | 312 | 4.39e-87 | 283 |
Msa0187350 | AT5G53540.1 | 53.386 | 251 | 115 | 2 | 515 | 764 | 66 | 315 | 1.32e-86 | 282 |
Msa0187350 | AT2G45500.4 | 41.695 | 295 | 149 | 8 | 492 | 768 | 31 | 320 | 2.74e-64 | 220 |
Msa0187350 | AT2G45500.3 | 41.695 | 295 | 149 | 8 | 492 | 768 | 31 | 320 | 2.74e-64 | 220 |
Msa0187350 | AT2G45500.2 | 41.695 | 295 | 149 | 8 | 492 | 768 | 164 | 453 | 3.67e-63 | 221 |
Msa0187350 | AT2G45500.1 | 41.695 | 295 | 149 | 8 | 492 | 768 | 168 | 457 | 4.74e-63 | 221 |
Msa0187350 | AT2G45500.5 | 41.695 | 295 | 149 | 8 | 492 | 768 | 174 | 463 | 4.79e-63 | 221 |
Msa0187350 | AT3G27120.1 | 40.000 | 345 | 157 | 10 | 513 | 845 | 370 | 676 | 1.18e-62 | 224 |
Msa0187350 | AT1G80350.1 | 37.461 | 323 | 164 | 6 | 513 | 829 | 217 | 507 | 8.09e-61 | 216 |
Msa0187350 | AT2G34560.2 | 42.909 | 275 | 143 | 6 | 491 | 757 | 65 | 333 | 2.05e-60 | 211 |
Msa0187350 | AT2G34560.1 | 42.909 | 275 | 143 | 6 | 491 | 757 | 56 | 324 | 2.05e-60 | 210 |
Msa0187350 | AT2G27600.1 | 44.298 | 228 | 124 | 3 | 532 | 758 | 128 | 353 | 1.31e-55 | 198 |
Msa0187350 | AT3G53230.1 | 37.805 | 246 | 143 | 5 | 532 | 773 | 477 | 716 | 5.33e-47 | 181 |
Msa0187350 | AT3G53230.1 | 40.175 | 229 | 132 | 3 | 532 | 758 | 204 | 429 | 5.98e-46 | 177 |
Msa0187350 | AT3G09840.1 | 39.916 | 238 | 138 | 3 | 532 | 767 | 203 | 437 | 7.93e-47 | 180 |
Msa0187350 | AT3G09840.1 | 36.437 | 247 | 146 | 4 | 532 | 773 | 476 | 716 | 7.26e-45 | 174 |
Msa0187350 | AT5G03340.1 | 39.496 | 238 | 139 | 3 | 532 | 767 | 203 | 437 | 3.70e-46 | 178 |
Msa0187350 | AT5G03340.1 | 32.188 | 320 | 203 | 6 | 532 | 847 | 476 | 785 | 2.14e-45 | 176 |
Msa0187350 | AT2G26140.1 | 41.200 | 250 | 137 | 6 | 524 | 769 | 215 | 458 | 2.38e-43 | 169 |
Msa0187350 | AT1G45000.1 | 36.220 | 254 | 150 | 5 | 532 | 776 | 135 | 385 | 1.12e-42 | 160 |
Msa0187350 | AT3G56690.1 | 38.983 | 236 | 139 | 3 | 533 | 765 | 721 | 954 | 1.48e-42 | 168 |
Msa0187350 | AT3G56690.1 | 35.678 | 199 | 122 | 4 | 567 | 762 | 415 | 610 | 2.42e-32 | 135 |
Msa0187350 | AT1G53750.1 | 36.957 | 230 | 139 | 3 | 532 | 757 | 164 | 391 | 7.43e-42 | 159 |
Msa0187350 | AT5G43010.1 | 35.433 | 254 | 152 | 5 | 532 | 776 | 135 | 385 | 7.62e-42 | 158 |
Msa0187350 | AT1G50250.1 | 35.766 | 274 | 165 | 5 | 530 | 795 | 256 | 526 | 2.18e-40 | 159 |
Msa0187350 | AT5G42270.1 | 35.401 | 274 | 166 | 5 | 530 | 795 | 244 | 514 | 2.25e-40 | 159 |
Msa0187350 | AT4G29040.1 | 36.087 | 230 | 139 | 4 | 534 | 758 | 186 | 412 | 2.66e-40 | 155 |
Msa0187350 | AT5G19990.2 | 37.339 | 233 | 137 | 5 | 532 | 758 | 99 | 328 | 3.18e-40 | 152 |
Msa0187350 | AT2G20140.1 | 36.087 | 230 | 139 | 4 | 534 | 758 | 186 | 412 | 3.47e-40 | 154 |
Msa0187350 | AT5G19990.1 | 37.339 | 233 | 137 | 5 | 532 | 758 | 157 | 386 | 3.83e-40 | 154 |
Msa0187350 | AT5G19990.3 | 37.339 | 233 | 137 | 5 | 532 | 758 | 157 | 386 | 3.83e-40 | 154 |
Msa0187350 | AT5G20000.1 | 37.339 | 233 | 137 | 5 | 532 | 758 | 157 | 386 | 3.94e-40 | 154 |
Msa0187350 | AT5G15250.1 | 38.174 | 241 | 142 | 5 | 533 | 769 | 221 | 458 | 6.93e-40 | 158 |
Msa0187350 | AT5G58290.1 | 35.498 | 231 | 143 | 3 | 532 | 758 | 151 | 379 | 3.92e-39 | 150 |
Msa0187350 | AT2G30950.1 | 38.430 | 242 | 139 | 6 | 533 | 767 | 224 | 462 | 4.65e-39 | 155 |
Msa0187350 | AT2G30950.2 | 38.430 | 242 | 139 | 6 | 533 | 767 | 224 | 462 | 4.65e-39 | 155 |
Msa0187350 | AT2G30950.3 | 38.430 | 242 | 139 | 6 | 533 | 767 | 224 | 462 | 4.65e-39 | 155 |
Msa0187350 | AT2G30950.4 | 38.430 | 242 | 139 | 6 | 533 | 767 | 228 | 466 | 5.59e-39 | 155 |
Msa0187350 | AT1G09100.1 | 34.263 | 251 | 150 | 5 | 515 | 757 | 150 | 393 | 2.21e-38 | 149 |
Msa0187350 | AT3G01610.1 | 31.269 | 323 | 190 | 8 | 534 | 845 | 231 | 532 | 2.63e-38 | 154 |
Msa0187350 | AT3G01610.1 | 34.615 | 234 | 142 | 5 | 532 | 760 | 524 | 751 | 1.07e-32 | 136 |
Msa0187350 | AT3G05530.1 | 34.263 | 251 | 150 | 5 | 515 | 757 | 151 | 394 | 2.90e-38 | 148 |
Msa0187350 | AT3G01610.2 | 31.269 | 323 | 190 | 8 | 534 | 845 | 231 | 532 | 3.57e-38 | 154 |
Msa0187350 | AT3G01610.2 | 34.615 | 234 | 142 | 5 | 532 | 760 | 524 | 751 | 1.27e-32 | 136 |
Msa0187350 | AT1G53780.1 | 36.000 | 225 | 138 | 3 | 532 | 752 | 336 | 558 | 4.37e-38 | 151 |
Msa0187350 | AT1G53780.4 | 36.000 | 225 | 138 | 3 | 532 | 752 | 336 | 558 | 4.37e-38 | 151 |
Msa0187350 | AT1G53780.3 | 36.000 | 225 | 138 | 3 | 532 | 752 | 335 | 557 | 4.57e-38 | 151 |
Msa0187350 | AT1G53780.2 | 36.000 | 225 | 138 | 3 | 532 | 752 | 357 | 579 | 4.92e-38 | 151 |
Msa0187350 | AT3G47060.1 | 39.207 | 227 | 128 | 5 | 533 | 752 | 322 | 545 | 1.22e-37 | 152 |
Msa0187350 | AT5G53170.1 | 39.344 | 244 | 136 | 7 | 519 | 758 | 346 | 581 | 3.28e-37 | 150 |
Msa0187350 | AT1G06430.1 | 38.839 | 224 | 130 | 5 | 533 | 752 | 217 | 437 | 3.69e-37 | 149 |
Msa0187350 | AT1G06430.3 | 38.839 | 224 | 130 | 5 | 533 | 752 | 217 | 437 | 3.69e-37 | 149 |
Msa0187350 | AT1G06430.2 | 38.839 | 224 | 130 | 5 | 533 | 752 | 217 | 437 | 3.69e-37 | 149 |
Msa0187350 | AT1G03000.1 | 34.298 | 242 | 152 | 6 | 532 | 768 | 654 | 893 | 5.49e-37 | 150 |
Msa0187350 | AT5G15250.2 | 34.848 | 264 | 142 | 6 | 533 | 769 | 221 | 481 | 1.11e-36 | 145 |
Msa0187350 | AT1G05910.1 | 38.494 | 239 | 136 | 5 | 532 | 762 | 377 | 612 | 1.23e-36 | 150 |
Msa0187350 | AT1G07510.1 | 36.481 | 233 | 138 | 5 | 533 | 758 | 324 | 553 | 2.04e-36 | 148 |
Msa0187350 | AT5G58870.1 | 37.885 | 227 | 131 | 5 | 533 | 752 | 326 | 549 | 8.94e-36 | 146 |
Msa0187350 | AT2G29080.1 | 36.207 | 232 | 139 | 5 | 533 | 758 | 319 | 547 | 3.22e-35 | 144 |
Msa0187350 | AT3G02450.1 | 37.118 | 229 | 136 | 5 | 533 | 757 | 331 | 555 | 3.88e-33 | 136 |
Msa0187350 | AT5G08470.1 | 32.900 | 231 | 150 | 3 | 535 | 763 | 843 | 1070 | 5.68e-33 | 138 |
Msa0187350 | AT5G08470.3 | 32.900 | 231 | 150 | 3 | 535 | 763 | 834 | 1061 | 6.04e-33 | 138 |
Msa0187350 | AT2G03670.1 | 35.379 | 277 | 150 | 5 | 533 | 799 | 283 | 540 | 6.49e-33 | 135 |
Msa0187350 | AT2G03670.1 | 35.043 | 234 | 141 | 6 | 526 | 751 | 12 | 242 | 3.76e-30 | 127 |
Msa0187350 | AT3G16290.1 | 34.728 | 239 | 135 | 7 | 531 | 758 | 405 | 633 | 1.76e-32 | 136 |
Msa0187350 | AT4G23940.1 | 34.538 | 249 | 148 | 4 | 533 | 769 | 427 | 672 | 5.02e-32 | 134 |
Msa0187350 | AT2G03670.2 | 35.043 | 234 | 141 | 6 | 526 | 751 | 12 | 242 | 4.55e-31 | 127 |
Msa0187350 | AT2G03670.2 | 38.194 | 144 | 76 | 2 | 533 | 668 | 283 | 421 | 3.69e-16 | 82.4 |
Msa0187350 | AT5G64580.1 | 35.055 | 271 | 157 | 8 | 522 | 777 | 301 | 567 | 2.07e-29 | 126 |
Msa0187350 | AT4G04180.2 | 29.474 | 285 | 176 | 8 | 532 | 803 | 310 | 582 | 2.31e-29 | 124 |
Msa0187350 | AT4G04180.1 | 29.474 | 285 | 176 | 8 | 532 | 803 | 315 | 587 | 2.91e-29 | 124 |
Msa0187350 | AT3G15120.2 | 31.855 | 248 | 149 | 7 | 520 | 752 | 708 | 950 | 9.12e-29 | 125 |
Msa0187350 | AT3G15120.1 | 31.855 | 248 | 149 | 7 | 520 | 752 | 698 | 940 | 1.06e-28 | 125 |
Msa0187350 | AT1G79560.3 | 30.418 | 263 | 147 | 7 | 538 | 771 | 482 | 737 | 1.35e-27 | 120 |
Msa0187350 | AT1G79560.1 | 30.418 | 263 | 147 | 7 | 538 | 771 | 482 | 737 | 1.56e-27 | 120 |
Msa0187350 | AT1G79560.2 | 30.418 | 263 | 147 | 7 | 538 | 771 | 482 | 737 | 1.57e-27 | 120 |
Msa0187350 | AT1G45000.2 | 40.000 | 140 | 80 | 2 | 532 | 668 | 135 | 273 | 1.31e-25 | 109 |
Msa0187350 | AT4G04910.1 | 33.476 | 233 | 123 | 10 | 567 | 779 | 247 | 467 | 8.78e-21 | 98.6 |
Msa0187350 | AT5G08470.2 | 31.757 | 148 | 98 | 2 | 535 | 682 | 843 | 987 | 1.83e-18 | 91.3 |
Msa0187350 | AT3G04340.1 | 30.435 | 230 | 134 | 9 | 519 | 736 | 774 | 989 | 4.05e-18 | 90.5 |
Msa0187350 | AT5G16930.1 | 28.846 | 208 | 117 | 5 | 569 | 750 | 397 | 599 | 2.09e-15 | 80.9 |
Msa0187350 | AT3G03060.1 | 29.327 | 208 | 116 | 5 | 569 | 750 | 385 | 587 | 6.71e-15 | 79.3 |
Msa0187350 | AT2G18330.1 | 32.168 | 143 | 91 | 3 | 569 | 710 | 384 | 521 | 4.66e-14 | 76.6 |
Msa0187350 | AT4G36580.1 | 31.469 | 143 | 92 | 3 | 569 | 710 | 381 | 518 | 9.39e-13 | 72.4 |
Find 192 sgRNAs with CRISPR-Local
Find 351 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TGCCGAGGAATATTGTTATT+TGG | 0.127056 | 2_1:-2050624 | Msa0187350:CDS |
GAGAAGCTATCTGACATATT+TGG | 0.138595 | 2_1:-2053096 | Msa0187350:CDS |
CTGGACAAAATGTTTCTAAA+TGG | 0.179519 | 2_1:-2054357 | Msa0187350:CDS |
TTCCATTGAATTTCCCTTTA+CGG | 0.223604 | 2_1:+2051367 | None:intergenic |
ATGCCTTGCCTTAGATAATA+AGG | 0.239175 | 2_1:+2054220 | None:intergenic |
GGAATTGGATTAGCTAATTC+TGG | 0.245413 | 2_1:-2054376 | Msa0187350:CDS |
ATAAATTCCCTTATTATCTA+AGG | 0.247591 | 2_1:-2054228 | Msa0187350:intron |
CAACATATCACAGTTAGTTT+AGG | 0.256527 | 2_1:-2054476 | Msa0187350:five_prime_UTR |
TCTGGACCAATTCTGATTCT+TGG | 0.270915 | 2_1:-2051853 | Msa0187350:CDS |
ATGAATTTGAAAAGCGAATA+AGG | 0.281806 | 2_1:-2050788 | Msa0187350:CDS |
GCTTGCAGCAACCTGATTCT+TGG | 0.290000 | 2_1:+2048999 | None:intergenic |
ACAAGATGTGATTCATCTTC+TGG | 0.292156 | 2_1:+2051742 | None:intergenic |
TGTCTACCATCACTTCTAAA+TGG | 0.295424 | 2_1:-2050524 | Msa0187350:CDS |
GCCGAGGAATATTGTTATTT+GGG | 0.310498 | 2_1:-2050623 | Msa0187350:CDS |
AACATATCACAGTTAGTTTA+GGG | 0.312727 | 2_1:-2054475 | Msa0187350:five_prime_UTR |
GAAGAAGAGAAAGAATAATT+AGG | 0.313556 | 2_1:+2054331 | None:intergenic |
ATATACCGGAAGTGATTTAA+AGG | 0.314180 | 2_1:-2049636 | Msa0187350:intron |
CTGCAGATTCAGGGTAAATA+TGG | 0.314309 | 2_1:-2053286 | Msa0187350:intron |
TGGACAAAATGTTTCTAAAT+GGG | 0.322094 | 2_1:-2054356 | Msa0187350:CDS |
CTCTGCCGAGGGAGCTGGAA+TGG | 0.345392 | 2_1:-2048974 | Msa0187350:CDS |
TGAGGCCAAGTTGCTTCTCT+TGG | 0.346585 | 2_1:-2053418 | Msa0187350:CDS |
ACTTGGATGAAGCTATTATA+AGG | 0.347356 | 2_1:-2050272 | Msa0187350:CDS |
TCATTTGCTGGTATGACTTC+AGG | 0.347511 | 2_1:+2050765 | None:intergenic |
GATTCAGCAAGAGAGGTTAA+AGG | 0.352811 | 2_1:-2049276 | Msa0187350:CDS |
GATGTTACATTCTCTGATAT+TGG | 0.354632 | 2_1:-2050738 | Msa0187350:CDS |
GGTTCGCGAGTTCTAGATTC+TGG | 0.357554 | 2_1:-2051832 | Msa0187350:CDS |
ATCCAAGTCAAATGGCCTAT+TGG | 0.357867 | 2_1:+2050287 | None:intergenic |
TGTATGGAGAAGGTGGTTCT+AGG | 0.358234 | 2_1:-2048927 | Msa0187350:CDS |
TTATTTGGGCCTCCTGGAAC+TGG | 0.359315 | 2_1:-2050609 | Msa0187350:CDS |
TATGAAGATGATTCAAGTTC+AGG | 0.362767 | 2_1:-2051692 | Msa0187350:CDS |
GTAGGAGTTGGAGTTGGAAT+TGG | 0.365983 | 2_1:-2054391 | Msa0187350:CDS |
TCTATTGTAATGCAGAATTA+TGG | 0.369282 | 2_1:-2049768 | Msa0187350:intron |
TTTCAAAGAGGCCAAGAATC+AGG | 0.374209 | 2_1:-2049010 | Msa0187350:CDS |
ACAGGTGCTTGCCAAGGCTT+TGG | 0.374564 | 2_1:-2053451 | Msa0187350:CDS |
AGAAGCTATCTGACATATTT+GGG | 0.377459 | 2_1:-2053095 | Msa0187350:CDS |
TTCAAGAAACCTGGATTTGT+AGG | 0.381738 | 2_1:+2052503 | None:intergenic |
TGCTGAATCAACTCTCTAAC+TGG | 0.385985 | 2_1:+2049290 | None:intergenic |
GACTACCATCTGTTGAGAAC+AGG | 0.395163 | 2_1:-2049742 | Msa0187350:CDS |
GAAGCATTCCTACGGAGCTT+TGG | 0.396052 | 2_1:+2052566 | None:intergenic |
CAGCTGGCTGTGCGCTTCAA+AGG | 0.397115 | 2_1:+2052158 | None:intergenic |
AGCTTCTCTGCCGAGGGAGC+TGG | 0.402753 | 2_1:-2048979 | Msa0187350:CDS |
TGTGCACAACTGCTGCTTAT+CGG | 0.403241 | 2_1:-2049313 | Msa0187350:CDS |
CTTTGAAGCGCACAGCCAGC+TGG | 0.404609 | 2_1:-2052157 | Msa0187350:CDS |
CATCGACAAATATAATAGTT+GGG | 0.404747 | 2_1:+2050445 | None:intergenic |
CATTGTGTCTTCCACACATA+TGG | 0.406292 | 2_1:+2051606 | None:intergenic |
TATAATAGTTGGGGAGACTT+TGG | 0.410118 | 2_1:+2050455 | None:intergenic |
GGCTTTGGCTCATTACTTTG+AGG | 0.414743 | 2_1:-2053436 | Msa0187350:CDS |
GTAACATCAATCTCATTTGC+TGG | 0.415172 | 2_1:+2050753 | None:intergenic |
ATTCTTCTCTCTGGCCCTGC+TGG | 0.415625 | 2_1:-2054014 | Msa0187350:intron |
TTAGGGCTCTTCAACTCAAA+TGG | 0.415703 | 2_1:-2054458 | Msa0187350:exon |
TTGTTCTTGCAGCAACCAAT+AGG | 0.416450 | 2_1:-2050302 | Msa0187350:CDS |
ACCATCACTTCTAAATGGTT+TGG | 0.418435 | 2_1:-2050519 | Msa0187350:CDS |
ATTCAGGGTAAATATGGTTC+TGG | 0.421363 | 2_1:-2053280 | Msa0187350:CDS |
AGCTAATTATTTCTTGCAAT+AGG | 0.423380 | 2_1:-2051495 | Msa0187350:intron |
TGTCAGCTGGAAGTCTCAAT+TGG | 0.424007 | 2_1:-2051722 | Msa0187350:CDS |
TCATCGACAAATATAATAGT+TGG | 0.424477 | 2_1:+2050444 | None:intergenic |
CAAAACAGCAAAGTTATCAT+TGG | 0.424553 | 2_1:+2048768 | None:intergenic |
GCTTTCCATTTCTGTATTCG+AGG | 0.424849 | 2_1:+2051515 | None:intergenic |
TGTCGTGAGCCCGTCCCAAT+GGG | 0.429515 | 2_1:+2050344 | None:intergenic |
GAGGAGAATAGAGAAGGAAA+TGG | 0.432443 | 2_1:+2054519 | None:intergenic |
ATATTGTTATTTGGGCCTCC+TGG | 0.432710 | 2_1:-2050615 | Msa0187350:CDS |
TCTTAAAGAACTTTACCAAC+AGG | 0.435941 | 2_1:-2053469 | Msa0187350:intron |
CATTGGGTATATTCCGTAAA+GGG | 0.437041 | 2_1:-2051380 | Msa0187350:CDS |
GTTGGTGTTGGAGTAGGAGT+TGG | 0.437466 | 2_1:-2054403 | Msa0187350:CDS |
TGCTCCAGCTTCCTTTGCAA+TGG | 0.438187 | 2_1:+2050566 | None:intergenic |
TGAATTCTTCATTGCCTAAG+AGG | 0.442050 | 2_1:+2048814 | None:intergenic |
TTGGGCAACGAACAAGAGTT+GGG | 0.443792 | 2_1:-2050407 | Msa0187350:CDS |
CCTTAGGCCATTGAATATGC+AGG | 0.449647 | 2_1:-2049034 | Msa0187350:CDS |
GAATGAATTTATGTCCCATT+GGG | 0.450075 | 2_1:-2050358 | Msa0187350:CDS |
CGCGAACCAAGAATCAGAAT+TGG | 0.451265 | 2_1:+2051847 | None:intergenic |
TTGAAATCCTGCATATTCAA+TGG | 0.451870 | 2_1:+2049027 | None:intergenic |
AAAATGTTGAAGAGACTCTC+TGG | 0.452650 | 2_1:-2051871 | Msa0187350:CDS |
AGCAGAACTATTCTTCTCTC+TGG | 0.452668 | 2_1:-2054023 | Msa0187350:CDS |
GGACTTTCCGCCTTCACTGC+TGG | 0.453814 | 2_1:+2051165 | None:intergenic |
ACTAATTATATCCGTGGCAA+TGG | 0.455494 | 2_1:+2048744 | None:intergenic |
ATCCACTTCAGAATCAACTT+TGG | 0.459722 | 2_1:-2053118 | Msa0187350:CDS |
AAATAGTCAAGAAGCAAAAG+AGG | 0.463105 | 2_1:-2049085 | Msa0187350:CDS |
CAAAGCAATCCTACAAATCC+AGG | 0.463996 | 2_1:-2052512 | Msa0187350:intron |
TCCCTCAGATATAGCACAAT+GGG | 0.464493 | 2_1:+2051943 | None:intergenic |
AACAGTTTGTCACATGCATT+GGG | 0.467253 | 2_1:-2051396 | Msa0187350:intron |
TGCTGCAAGCTTCTCTGCCG+AGG | 0.467858 | 2_1:-2048986 | Msa0187350:CDS |
TTCCGTAAAGGGAAATTCAA+TGG | 0.468198 | 2_1:-2051369 | Msa0187350:CDS |
TCTGCCGAGGGAGCTGGAAT+GGG | 0.470640 | 2_1:-2048973 | Msa0187350:CDS |
AAAGACCTCGAATACAGAAA+TGG | 0.472233 | 2_1:-2051520 | Msa0187350:CDS |
AACCAATAGGCCATTTGACT+TGG | 0.473055 | 2_1:-2050289 | Msa0187350:CDS |
AAGGCCATTGCAAAGGAAGC+TGG | 0.473597 | 2_1:-2050570 | Msa0187350:CDS |
TTGAGTGTTGGTGTTGGAGT+AGG | 0.474995 | 2_1:-2054409 | Msa0187350:CDS |
TTGTCGTGAGCCCGTCCCAA+TGG | 0.476108 | 2_1:+2050343 | None:intergenic |
TAAGAAACAGAAAGCTACTA+AGG | 0.476792 | 2_1:-2049148 | Msa0187350:CDS |
CTATGATTGCTGCAGATTCA+GGG | 0.479630 | 2_1:-2053295 | Msa0187350:intron |
TTAGAAGTCCTCCAGTGAAA+AGG | 0.480190 | 2_1:+2050652 | None:intergenic |
GCATTCCTACGGAGCTTTGG+AGG | 0.482889 | 2_1:+2052569 | None:intergenic |
TGATCTTGATTGCGATGACT+TGG | 0.483110 | 2_1:-2051632 | Msa0187350:CDS |
TATATCTGAGGGATGTTGAT+AGG | 0.484831 | 2_1:-2051933 | Msa0187350:CDS |
GTCATCGCAATCAAGATCAT+TGG | 0.485493 | 2_1:+2051636 | None:intergenic |
CTCACCCATTCCAGCTCCCT+CGG | 0.486104 | 2_1:+2048969 | None:intergenic |
GGTCTGATTTCTATATCGTA+TGG | 0.490528 | 2_1:+2051766 | None:intergenic |
TCTTCTACTTCAAATATTAG+CGG | 0.491615 | 2_1:-2052545 | Msa0187350:CDS |
CCTGCATATTCAATGGCCTA+AGG | 0.491903 | 2_1:+2049034 | None:intergenic |
CTTGGGCAACGAACAAGAGT+TGG | 0.492617 | 2_1:-2050408 | Msa0187350:CDS |
ATGCTTAGACTTATTGTTGA+CGG | 0.493838 | 2_1:-2054274 | Msa0187350:CDS |
TGCCTTGCCTTAGATAATAA+GGG | 0.497140 | 2_1:+2054221 | None:intergenic |
ATGAATCACATCTTGTCAGC+TGG | 0.498735 | 2_1:-2051735 | Msa0187350:CDS |
AGAATGAATTTATGTCCCAT+TGG | 0.500121 | 2_1:-2050359 | Msa0187350:CDS |
CTCCAAAGTTGATTCTGAAG+TGG | 0.501205 | 2_1:+2053116 | None:intergenic |
ATAGCTTCATCCAAGTCAAA+TGG | 0.508582 | 2_1:+2050279 | None:intergenic |
ACTGGAGCAGCACTTTCAGC+AGG | 0.511785 | 2_1:+2051138 | None:intergenic |
CAGATATAGCACAATGGGAT+AGG | 0.512815 | 2_1:+2051948 | None:intergenic |
AGAAGAATAGTTCTGCTAGC+AGG | 0.513029 | 2_1:+2054029 | None:intergenic |
GAGAGTTGATTCAGCAAGAG+AGG | 0.513144 | 2_1:-2049283 | Msa0187350:CDS |
ACCAAACCATTTAGAAGTGA+TGG | 0.513218 | 2_1:+2050518 | None:intergenic |
AGTCCTCCAGTGAAAAGGTC+TGG | 0.513876 | 2_1:+2050657 | None:intergenic |
TGGTAATGAATTCGAAGAGT+TGG | 0.516128 | 2_1:-2051812 | Msa0187350:CDS |
CTAATTATATCCGTGGCAAT+GGG | 0.516172 | 2_1:+2048745 | None:intergenic |
TGGAAGAGATACATCAAAGA+TGG | 0.516754 | 2_1:-2051349 | Msa0187350:CDS |
AATTTATGTCCCATTGGGAC+GGG | 0.517317 | 2_1:-2050353 | Msa0187350:CDS |
TCACAAAGGGAGGAACCTAA+AGG | 0.517358 | 2_1:-2053057 | Msa0187350:intron |
GAAAAGGTCTGGCCTTCGTA+GGG | 0.518674 | 2_1:+2050668 | None:intergenic |
AACTATTATATTTGTCGATG+AGG | 0.520545 | 2_1:-2050442 | Msa0187350:CDS |
GCATTGGGTATATTCCGTAA+AGG | 0.526760 | 2_1:-2051381 | Msa0187350:CDS |
CTGCATATTCAATGGCCTAA+GGG | 0.528080 | 2_1:+2049035 | None:intergenic |
AAGAAAGAGTTATTACCCTT+AGG | 0.535403 | 2_1:-2049050 | Msa0187350:CDS |
TAAATCCAAGAGAAGCAACT+TGG | 0.537809 | 2_1:+2053413 | None:intergenic |
CTGATATCAGCGTTGAGTGT+TGG | 0.538412 | 2_1:-2054421 | Msa0187350:CDS |
GCTGCAAGCTTCTCTGCCGA+GGG | 0.538756 | 2_1:-2048985 | Msa0187350:CDS |
GAACAGTTTGTCACATGCAT+TGG | 0.539309 | 2_1:-2051397 | Msa0187350:intron |
ATGAGGTTGATAGCATGCTT+GGG | 0.541655 | 2_1:-2050425 | Msa0187350:CDS |
ACCATGACAGACGGATATAC+CGG | 0.543702 | 2_1:-2049650 | Msa0187350:CDS |
ACACAATGGAATGAGCTGTA+TGG | 0.544019 | 2_1:-2048943 | Msa0187350:CDS |
ACAACAGTTTCTACCACGCT+CGG | 0.546133 | 2_1:+2051192 | None:intergenic |
GATGAGGTTGATAGCATGCT+TGG | 0.547219 | 2_1:-2050426 | Msa0187350:CDS |
GGACAAAATGTTTCTAAATG+GGG | 0.549056 | 2_1:-2054355 | Msa0187350:CDS |
ATCCCATTGTGCTATATCTG+AGG | 0.550228 | 2_1:-2051945 | Msa0187350:CDS |
CTGGAAGTCTCAATTGGAAG+AGG | 0.550882 | 2_1:-2051716 | Msa0187350:CDS |
ACTTATACAGTCTCTTTACA+AGG | 0.552753 | 2_1:-2052117 | Msa0187350:intron |
GAATTTATGTCCCATTGGGA+CGG | 0.552908 | 2_1:-2050354 | Msa0187350:CDS |
TCAACTTCAGTGGCAAAGGC+AGG | 0.553933 | 2_1:-2051093 | Msa0187350:CDS |
GCACAGGCAAAGCAGTGGAA+TGG | 0.558428 | 2_1:-2052733 | Msa0187350:CDS |
TGAAAAGGTCTGGCCTTCGT+AGG | 0.560850 | 2_1:+2050667 | None:intergenic |
TCCCATTGTGCTATATCTGA+GGG | 0.566127 | 2_1:-2051944 | Msa0187350:CDS |
AAAGTAATGAGCCAAAGCCT+TGG | 0.568852 | 2_1:+2053440 | None:intergenic |
AATAACAATATTCCTCGGCA+TGG | 0.570070 | 2_1:+2050627 | None:intergenic |
TATTGGTTGCTGCAAGAACA+AGG | 0.570440 | 2_1:+2050304 | None:intergenic |
GTTGGAGTAGGAGTTGGAGT+TGG | 0.570719 | 2_1:-2054397 | Msa0187350:CDS |
TGTTGTGAAACCAGCAGTGA+AGG | 0.570947 | 2_1:-2051175 | Msa0187350:CDS |
TCAGCGTTGAGTGTTGGTGT+TGG | 0.571819 | 2_1:-2054415 | Msa0187350:CDS |
ATCGACAAATATAATAGTTG+GGG | 0.575239 | 2_1:+2050446 | None:intergenic |
ATGATAACAGTGAGCAGACA+CGG | 0.576291 | 2_1:-2054124 | Msa0187350:intron |
GCAGCACTTTCAGCAGGAGG+AGG | 0.576838 | 2_1:+2051144 | None:intergenic |
CTATTATAAGGCGATTTGAA+AGG | 0.578264 | 2_1:-2050260 | Msa0187350:CDS |
TCCGGTATATCCGTCTGTCA+TGG | 0.580164 | 2_1:+2049649 | None:intergenic |
GCCCAAATAACAATATTCCT+CGG | 0.581038 | 2_1:+2050622 | None:intergenic |
GTAATCCTCCAAAGCTCCGT+AGG | 0.582339 | 2_1:-2052574 | Msa0187350:CDS |
GACGGGCTCACGACAAAACA+AGG | 0.585226 | 2_1:-2050336 | Msa0187350:CDS |
TTACCAACAGGTGCTTGCCA+AGG | 0.585988 | 2_1:-2053457 | Msa0187350:CDS |
AATATCAACTTCAGTGGCAA+AGG | 0.588775 | 2_1:-2051097 | Msa0187350:CDS |
ACTACCATCTGTTGAGAACA+GGG | 0.590750 | 2_1:-2049741 | Msa0187350:CDS |
GCAAGAGAGGTTAAAGGACC+TGG | 0.591773 | 2_1:-2049270 | Msa0187350:intron |
GTCTGATTTCTATATCGTAT+GGG | 0.593760 | 2_1:+2051767 | None:intergenic |
TTATAAGGCGATTTGAAAGG+AGG | 0.598715 | 2_1:-2050257 | Msa0187350:intron |
GCTGGCAAAGGCCATTGCAA+AGG | 0.601879 | 2_1:-2050577 | Msa0187350:CDS |
AAGCCTTGGCAAGCACCTGT+TGG | 0.603838 | 2_1:+2053454 | None:intergenic |
GAATGGGTGAGCTGACACAA+TGG | 0.609246 | 2_1:-2048957 | Msa0187350:CDS |
GAATATGCAGGATTTCAAAG+AGG | 0.609477 | 2_1:-2049022 | Msa0187350:CDS |
CATATGTGTGGAAGACACAA+TGG | 0.611126 | 2_1:-2051605 | Msa0187350:CDS |
TTGTAATGCAGAATTATGGT+AGG | 0.614621 | 2_1:-2049764 | Msa0187350:intron |
TTTCTTCGTTAAGGCGACGG+AGG | 0.615675 | 2_1:+2054500 | None:intergenic |
CTTGTAACTAATTATATCCG+TGG | 0.615713 | 2_1:+2048738 | None:intergenic |
AAGTAGAAGAAGCATTCCTA+CGG | 0.616716 | 2_1:+2052558 | None:intergenic |
GAACATAAAGATTCCGAGCG+TGG | 0.616823 | 2_1:-2051205 | Msa0187350:intron |
TTTAGAAGTGATGGTAGACA+TGG | 0.625906 | 2_1:+2050527 | None:intergenic |
GGATCAAGCTCTAAAATCTG+AGG | 0.630828 | 2_1:-2051325 | Msa0187350:intron |
AGCAGAAATATCAACTTCAG+TGG | 0.635357 | 2_1:-2051103 | Msa0187350:CDS |
GCGACGGAGGAGAATAGAGA+AGG | 0.637756 | 2_1:+2054513 | None:intergenic |
AAAATGCACAGGCAAAGCAG+TGG | 0.638842 | 2_1:-2052738 | Msa0187350:CDS |
TGACTTGGATTCCATATGTG+TGG | 0.639685 | 2_1:-2051617 | Msa0187350:CDS |
AGATGTGATTCATCTTCTGG+AGG | 0.643446 | 2_1:+2051745 | None:intergenic |
ATCCCTCAGATATAGCACAA+TGG | 0.643871 | 2_1:+2051942 | None:intergenic |
TAGTAATGCTTCCCCTACGA+AGG | 0.644889 | 2_1:-2050680 | Msa0187350:CDS |
AAGAGATACATCAAAGATGG+AGG | 0.649416 | 2_1:-2051346 | Msa0187350:CDS |
AGGGTAATAACTCTTTCTTG+TGG | 0.655070 | 2_1:+2049054 | None:intergenic |
GGAGCAGCACTTTCAGCAGG+AGG | 0.656104 | 2_1:+2051141 | None:intergenic |
TGGAATGAGCTGTATGGAGA+AGG | 0.660183 | 2_1:-2048937 | Msa0187350:CDS |
TGGGCAACGAACAAGAGTTG+GGG | 0.663916 | 2_1:-2050406 | Msa0187350:CDS |
TGTGAAACCAGCAGTGAAGG+CGG | 0.664475 | 2_1:-2051172 | Msa0187350:CDS |
TGATAACAGTGAGCAGACAC+GGG | 0.677219 | 2_1:-2054123 | Msa0187350:intron |
AAAAGGTCTGGCCTTCGTAG+GGG | 0.686155 | 2_1:+2050669 | None:intergenic |
GGACTTCTAAAACCATGCCG+AGG | 0.702159 | 2_1:-2050639 | Msa0187350:CDS |
GTAAATGAAACTAACCAGCA+GGG | 0.702987 | 2_1:+2054000 | None:intergenic |
GAACTCGCGACCATGACAGA+CGG | 0.704046 | 2_1:-2049659 | Msa0187350:CDS |
AATGAGCTGTATGGAGAAGG+TGG | 0.711147 | 2_1:-2048934 | Msa0187350:CDS |
TTGGGGAGCATGAAGCCATG+CGG | 0.720295 | 2_1:-2050389 | Msa0187350:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTTTATGATCTATAATA+AGG | - | chr2_1:2049585-2049604 | Msa0187350:intron | 10.0% |
!! | AAAATAATAGAAGATAAAAT+AGG | + | chr2_1:2049966-2049985 | None:intergenic | 10.0% |
!!! | TTTTATTTTATATTCTTACT+TGG | - | chr2_1:2050563-2050582 | Msa0187350:CDS | 10.0% |
!!! | TTATTATATTTCTATATTCT+CGG | + | chr2_1:2053140-2053159 | None:intergenic | 10.0% |
!!! | ATATATTTTAAAGACTAAAT+TGG | - | chr2_1:2053273-2053292 | Msa0187350:CDS | 10.0% |
!!! | ATTTTCAATATTTTCACAAA+GGG | - | chr2_1:2050127-2050146 | Msa0187350:intron | 15.0% |
!! | GAATAATGATAACTTATATT+TGG | - | chr2_1:2050277-2050296 | Msa0187350:CDS | 15.0% |
!!! | TCAGTAATATTGATTTAAAT+GGG | + | chr2_1:2050415-2050434 | None:intergenic | 15.0% |
!! | AAATAAAATAGAATGAAAGT+AGG | + | chr2_1:2050551-2050570 | None:intergenic | 15.0% |
!! | ATCTTATTCAGTTATAATTT+AGG | - | chr2_1:2050745-2050764 | Msa0187350:CDS | 15.0% |
!! | TTAATTAAACAATATGAGTT+TGG | + | chr2_1:2050862-2050881 | None:intergenic | 15.0% |
!!! | AAAGATATTGATTTGATAAT+TGG | - | chr2_1:2051189-2051208 | Msa0187350:CDS | 15.0% |
!!! | GAAATTTTGATTAAAAACAA+AGG | + | chr2_1:2052169-2052188 | None:intergenic | 15.0% |
!!! | TTGTATTATATTTCTATAGA+GGG | + | chr2_1:2053197-2053216 | None:intergenic | 15.0% |
!!! | TTTGTATTATATTTCTATAG+AGG | + | chr2_1:2053198-2053217 | None:intergenic | 15.0% |
!! | TTTAATCTTAATTTATGTTG+AGG | - | chr2_1:2053330-2053349 | Msa0187350:intron | 15.0% |
!! | TTAATCTTAATTTATGTTGA+GGG | - | chr2_1:2053331-2053350 | Msa0187350:intron | 15.0% |
!!! | ATATTTTCTTATGTTTTCAA+TGG | - | chr2_1:2053595-2053614 | Msa0187350:intron | 15.0% |
!! | TGTAGTACTATATTATTATA+GGG | + | chr2_1:2053812-2053831 | None:intergenic | 15.0% |
!! | TTGTAGTACTATATTATTAT+AGG | + | chr2_1:2053813-2053832 | None:intergenic | 15.0% |
!! | ATAAATTCCCTTATTATCTA+AGG | - | chr2_1:2048969-2048988 | Msa0187350:CDS | 20.0% |
!! | TGATTATGAAAACAAATCAA+AGG | + | chr2_1:2049033-2049052 | None:intergenic | 20.0% |
!! | ATGACAGAAAAAAAAAAAAC+TGG | + | chr2_1:2049496-2049515 | None:intergenic | 20.0% |
!!! | TTTTGAAAGACTATAATCAA+AGG | + | chr2_1:2050058-2050077 | None:intergenic | 20.0% |
!!! | CATTTTCAATATTTTCACAA+AGG | - | chr2_1:2050126-2050145 | Msa0187350:intron | 20.0% |
!! | AAAAAACCTGTATTAAAGAT+TGG | + | chr2_1:2050237-2050256 | None:intergenic | 20.0% |
!!! | ATCTTTAATACAGGTTTTTT+CGG | - | chr2_1:2050237-2050256 | Msa0187350:intron | 20.0% |
!!! | GTCAGTAATATTGATTTAAA+TGG | + | chr2_1:2050416-2050435 | None:intergenic | 20.0% |
!! | TCTCAAAATTATGCTTATTA+TGG | + | chr2_1:2050799-2050818 | None:intergenic | 20.0% |
!! | AAAGAAACCAATTCTATAAA+GGG | + | chr2_1:2050890-2050909 | None:intergenic | 20.0% |
!! | AAAAGAAACCAATTCTATAA+AGG | + | chr2_1:2050891-2050910 | None:intergenic | 20.0% |
!! | GTCTAAGAATTAAATTGAAA+AGG | + | chr2_1:2050967-2050986 | None:intergenic | 20.0% |
!! | TTATCAAATCAATATCTTTG+TGG | + | chr2_1:2051188-2051207 | None:intergenic | 20.0% |
!! | ATGTTAAAACATAATTTCTG+GGG | + | chr2_1:2053957-2053976 | None:intergenic | 20.0% |
!! | GATGTTAAAACATAATTTCT+GGG | + | chr2_1:2053958-2053977 | None:intergenic | 20.0% |
!! | AGATGTTAAAACATAATTTC+TGG | + | chr2_1:2053959-2053978 | None:intergenic | 20.0% |
!! | TAATATAAACAGCATATAGA+AGG | + | chr2_1:2054019-2054038 | None:intergenic | 20.0% |
!!! | ATATGTTGTTTTCTTCGTTA+AGG | + | chr2_1:2048709-2048728 | None:intergenic | 25.0% |
!! | AACATATCACAGTTAGTTTA+GGG | - | chr2_1:2048722-2048741 | Msa0187350:three_prime_UTR | 25.0% |
!! | TGGACAAAATGTTTCTAAAT+GGG | - | chr2_1:2048841-2048860 | Msa0187350:three_prime_UTR | 25.0% |
! | GAAGAAGAGAAAGAATAATT+AGG | + | chr2_1:2048869-2048888 | None:intergenic | 25.0% |
!!! | CTGAGTTTCTTTTAAAAACT+TGG | + | chr2_1:2049386-2049405 | None:intergenic | 25.0% |
!!! | TTTTCTGTCATTTTGATTTG+AGG | - | chr2_1:2049505-2049524 | Msa0187350:intron | 25.0% |
!!! | GAATCTCAATGTTTTAATCA+TGG | - | chr2_1:2049651-2049670 | Msa0187350:CDS | 25.0% |
!!! | TTTAACTGACTTTTCATTGA+AGG | - | chr2_1:2049803-2049822 | Msa0187350:intron | 25.0% |
! | ATGTTACATGTCTACATTAA+TGG | - | chr2_1:2049871-2049890 | Msa0187350:intron | 25.0% |
!!! | ATGCTCAATGTTTTTTATGT+AGG | - | chr2_1:2050307-2050326 | Msa0187350:CDS | 25.0% |
! | CTTAAATTTCTCTCTTTATG+TGG | - | chr2_1:2050351-2050370 | Msa0187350:CDS | 25.0% |
! | TCTTCTACTTCAAATATTAG+CGG | - | chr2_1:2050652-2050671 | Msa0187350:CDS | 25.0% |
!!! | CATAAATTTTTCAAGAAACC+TGG | + | chr2_1:2050706-2050725 | None:intergenic | 25.0% |
! | AACATTTCCCTTTATAGAAT+TGG | - | chr2_1:2050880-2050899 | Msa0187350:intron | 25.0% |
!! | AGCTAATTATTTCTTGCAAT+AGG | - | chr2_1:2051702-2051721 | Msa0187350:CDS | 25.0% |
! | AAATGCATATTAGTTGTACA+AGG | + | chr2_1:2051953-2051972 | None:intergenic | 25.0% |
! | GACTTCATATCTTAAGATTT+AGG | - | chr2_1:2052265-2052284 | Msa0187350:intron | 25.0% |
!! | TTTTCAAATTCATTATCAGG+AGG | + | chr2_1:2052402-2052421 | None:intergenic | 25.0% |
! | ATGAATTTGAAAAGCGAATA+AGG | - | chr2_1:2052409-2052428 | Msa0187350:intron | 25.0% |
! | ATCGACAAATATAATAGTTG+GGG | + | chr2_1:2052754-2052773 | None:intergenic | 25.0% |
! | CATCGACAAATATAATAGTT+GGG | + | chr2_1:2052755-2052774 | None:intergenic | 25.0% |
! | TCATCGACAAATATAATAGT+TGG | + | chr2_1:2052756-2052775 | None:intergenic | 25.0% |
! | AACTATTATATTTGTCGATG+AGG | - | chr2_1:2052755-2052774 | Msa0187350:intron | 25.0% |
! | TGGCATAATAAAATGAAGAA+TGG | + | chr2_1:2052991-2053010 | None:intergenic | 25.0% |
! | AAAAAAGCAGAGAAATAAAG+TGG | + | chr2_1:2053011-2053030 | None:intergenic | 25.0% |
! | ATACACACACAAAATATAGA+TGG | + | chr2_1:2053382-2053401 | None:intergenic | 25.0% |
!! | TATATTTTGTGTGTGTATGT+GGG | - | chr2_1:2053384-2053403 | Msa0187350:intron | 25.0% |
! | TCTATTGTAATGCAGAATTA+TGG | - | chr2_1:2053429-2053448 | Msa0187350:CDS | 25.0% |
!!! | GGACAAAGAAATTGATTTTA+AGG | - | chr2_1:2053516-2053535 | Msa0187350:intron | 25.0% |
! | AAAAACCTTTAAATCACTTC+CGG | + | chr2_1:2053569-2053588 | None:intergenic | 25.0% |
!! | TTTTCAATGGACATAACTAT+GGG | - | chr2_1:2053608-2053627 | Msa0187350:intron | 25.0% |
! | TCAAATAAACCAATCTAAAC+AGG | + | chr2_1:2053634-2053653 | None:intergenic | 25.0% |
! | AATAAGTTGTTTATCCAAAC+AGG | - | chr2_1:2053786-2053805 | Msa0187350:intron | 25.0% |
!!! | CTGATAATGTGTTTTCATTA+TGG | - | chr2_1:2053990-2054009 | Msa0187350:intron | 25.0% |
!! | TGCTGTTTATATTACTTAAC+AGG | - | chr2_1:2054025-2054044 | Msa0187350:CDS | 25.0% |
!!! | TTTTTCAATGAAATAGTGTG+TGG | - | chr2_1:2054350-2054369 | Msa0187350:CDS | 25.0% |
! | CAACATATCACAGTTAGTTT+AGG | - | chr2_1:2048721-2048740 | Msa0187350:three_prime_UTR | 30.0% |
! | CTGGACAAAATGTTTCTAAA+TGG | - | chr2_1:2048840-2048859 | Msa0187350:three_prime_UTR | 30.0% |
! | GGACAAAATGTTTCTAAATG+GGG | - | chr2_1:2048842-2048861 | Msa0187350:three_prime_UTR | 30.0% |
ATGCTTAGACTTATTGTTGA+CGG | - | chr2_1:2048923-2048942 | Msa0187350:CDS | 30.0% | |
TCTTAAAGAACTTTACCAAC+AGG | - | chr2_1:2049728-2049747 | Msa0187350:CDS | 30.0% | |
GACATGTAACATCACAAAAT+AGG | + | chr2_1:2049863-2049882 | None:intergenic | 30.0% | |
AGACAAAGAATAGCAGAATT+CGG | + | chr2_1:2050024-2050043 | None:intergenic | 30.0% | |
AGAAGCTATCTGACATATTT+GGG | - | chr2_1:2050102-2050121 | Msa0187350:intron | 30.0% | |
! | TTCAATATTTTCACAAAGGG+AGG | - | chr2_1:2050130-2050149 | Msa0187350:intron | 30.0% |
!! | AAGGAATTTGTTGTACCTTT+AGG | + | chr2_1:2050158-2050177 | None:intergenic | 30.0% |
TTATTCTTCAAACCAGAACA+AGG | + | chr2_1:2050263-2050282 | None:intergenic | 30.0% | |
! | AATTTAGGATCTCCTAATCA+AGG | - | chr2_1:2050760-2050779 | Msa0187350:CDS | 30.0% |
ATTTGTAGCATTCCTTGATT+AGG | + | chr2_1:2050775-2050794 | None:intergenic | 30.0% | |
! | AAAAGGATTTTACAGTGCAT+TGG | + | chr2_1:2050950-2050969 | None:intergenic | 30.0% |
ACTTATACAGTCTCTTTACA+AGG | - | chr2_1:2051080-2051099 | Msa0187350:CDS | 30.0% | |
TAAAAAGATTTCAGCATCAG+AGG | - | chr2_1:2051121-2051140 | Msa0187350:CDS | 30.0% | |
CAAATCAATATCTTTGTGGA+TGG | + | chr2_1:2051184-2051203 | None:intergenic | 30.0% | |
! | TAATTGGAAGTTTTACTTGC+AGG | - | chr2_1:2051205-2051224 | Msa0187350:intron | 30.0% |
!!! | AGAGTCTCTTCAACATTTTT+TGG | + | chr2_1:2051325-2051344 | None:intergenic | 30.0% |
GTCTGATTTCTATATCGTAT+GGG | + | chr2_1:2051433-2051452 | None:intergenic | 30.0% | |
! | TATGAAGATGATTCAAGTTC+AGG | - | chr2_1:2051505-2051524 | Msa0187350:CDS | 30.0% |
TTCCATTGAATTTCCCTTTA+CGG | + | chr2_1:2051833-2051852 | None:intergenic | 30.0% | |
ATCAGAAAAAAAGAAGAGAG+AGG | + | chr2_1:2052316-2052335 | None:intergenic | 30.0% | |
TACTTTACATATTCACTTGC+AGG | - | chr2_1:2052371-2052390 | Msa0187350:intron | 30.0% | |
! | CGCTTTTCAAATTCATTATC+AGG | + | chr2_1:2052405-2052424 | None:intergenic | 30.0% |
GATGTTACATTCTCTGATAT+TGG | - | chr2_1:2052459-2052478 | Msa0187350:intron | 30.0% | |
!!! | TTCATTCTTTATTTTCCGCA+TGG | + | chr2_1:2052826-2052845 | None:intergenic | 30.0% |
AGAATGAATTTATGTCCCAT+TGG | - | chr2_1:2052838-2052857 | Msa0187350:intron | 30.0% | |
GAATGAATTTATGTCCCATT+GGG | - | chr2_1:2052839-2052858 | Msa0187350:intron | 30.0% | |
ACTTGGATGAAGCTATTATA+AGG | - | chr2_1:2052925-2052944 | Msa0187350:intron | 30.0% | |
CTATTATAAGGCGATTTGAA+AGG | - | chr2_1:2052937-2052956 | Msa0187350:intron | 30.0% | |
CCATAACTTAACCAAAAAGT+GGG | + | chr2_1:2053068-2053087 | None:intergenic | 30.0% | |
TCCATAACTTAACCAAAAAG+TGG | + | chr2_1:2053069-2053088 | None:intergenic | 30.0% | |
TAGCTTAGAGATCAAATTGA+AGG | - | chr2_1:2053307-2053326 | Msa0187350:intron | 30.0% | |
TTAATTTATGTTGAGGGAGA+AGG | - | chr2_1:2053337-2053356 | Msa0187350:intron | 30.0% | |
! | CTATATTTTGTGTGTGTATG+TGG | - | chr2_1:2053383-2053402 | Msa0187350:intron | 30.0% |
TTGTAATGCAGAATTATGGT+AGG | - | chr2_1:2053433-2053452 | Msa0187350:CDS | 30.0% | |
! | AGAACAGGGAAAAGATTTTA+AGG | - | chr2_1:2053470-2053489 | Msa0187350:intron | 30.0% |
! | GACTCTTTTGTCAAAAGAAA+AGG | - | chr2_1:2053492-2053511 | Msa0187350:intron | 30.0% |
! | TCTTTTGTCAAAAGAAAAGG+TGG | - | chr2_1:2053495-2053514 | Msa0187350:intron | 30.0% |
ATATACCGGAAGTGATTTAA+AGG | - | chr2_1:2053561-2053580 | Msa0187350:intron | 30.0% | |
! | GTTTTCAATGGACATAACTA+TGG | - | chr2_1:2053607-2053626 | Msa0187350:intron | 30.0% |
ATATTATTATAGGGCCTGTT+TGG | + | chr2_1:2053803-2053822 | None:intergenic | 30.0% | |
TAAGAAACAGAAAGCTACTA+AGG | - | chr2_1:2054049-2054068 | Msa0187350:CDS | 30.0% | |
CAAAAATACTCAAGAAGCAA+AGG | - | chr2_1:2054079-2054098 | Msa0187350:CDS | 30.0% | |
AAATAGTCAAGAAGCAAAAG+AGG | - | chr2_1:2054112-2054131 | Msa0187350:CDS | 30.0% | |
AAGAAAGAGTTATTACCCTT+AGG | - | chr2_1:2054147-2054166 | Msa0187350:intron | 30.0% | |
TTGAAATCCTGCATATTCAA+TGG | + | chr2_1:2054173-2054192 | None:intergenic | 30.0% | |
CAAAACAGCAAAGTTATCAT+TGG | + | chr2_1:2054432-2054451 | None:intergenic | 30.0% | |
CTTGTAACTAATTATATCCG+TGG | + | chr2_1:2054462-2054481 | None:intergenic | 30.0% | |
!! | GGAATTGGATTAGCTAATTC+TGG | - | chr2_1:2048821-2048840 | Msa0187350:three_prime_UTR | 35.0% |
! | TTCCCTTATTATCTAAGGCA+AGG | - | chr2_1:2048974-2048993 | Msa0187350:CDS | 35.0% |
TGCCTTGCCTTAGATAATAA+GGG | + | chr2_1:2048979-2048998 | None:intergenic | 35.0% | |
ATGCCTTGCCTTAGATAATA+AGG | + | chr2_1:2048980-2048999 | None:intergenic | 35.0% | |
GTAAATGAAACTAACCAGCA+GGG | + | chr2_1:2049200-2049219 | None:intergenic | 35.0% | |
GAAAACTTATTCTTTGTCCC+CGG | - | chr2_1:2049272-2049291 | Msa0187350:CDS | 35.0% | |
TAAATCCAAGAGAAGCAACT+TGG | + | chr2_1:2049787-2049806 | None:intergenic | 35.0% | |
ATTCAGGGTAAATATGGTTC+TGG | - | chr2_1:2049917-2049936 | Msa0187350:intron | 35.0% | |
ATCCACTTCAGAATCAACTT+TGG | - | chr2_1:2050079-2050098 | Msa0187350:intron | 35.0% | |
GAGAAGCTATCTGACATATT+TGG | - | chr2_1:2050101-2050120 | Msa0187350:intron | 35.0% | |
TCCTTACATCTTCAAATCCT+TGG | - | chr2_1:2050173-2050192 | Msa0187350:intron | 35.0% | |
ACCAAGGATTTGAAGATGTA+AGG | + | chr2_1:2050177-2050196 | None:intergenic | 35.0% | |
!! | AATCTAGCTCTAATTCACCA+AGG | + | chr2_1:2050193-2050212 | None:intergenic | 35.0% |
GCTTTGCCAATCTTTAATAC+AGG | - | chr2_1:2050228-2050247 | Msa0187350:intron | 35.0% | |
TTATGTAGGATGCTTGTAAC+TGG | - | chr2_1:2050321-2050340 | Msa0187350:CDS | 35.0% | |
!! | GTATTGTCTGTTGATTTGCA+GGG | - | chr2_1:2050585-2050604 | Msa0187350:CDS | 35.0% |
!! | TATTGTCTGTTGATTTGCAG+GGG | - | chr2_1:2050586-2050605 | Msa0187350:CDS | 35.0% |
!! | AAGTAGAAGAAGCATTCCTA+CGG | + | chr2_1:2050642-2050661 | None:intergenic | 35.0% |
TTCAAGAAACCTGGATTTGT+AGG | + | chr2_1:2050697-2050716 | None:intergenic | 35.0% | |
! | TTTTTCATCAAAAGACCAGC+TGG | + | chr2_1:2051058-2051077 | None:intergenic | 35.0% |
! | TGTCTAGTTCCGAAAAACAT+GGG | + | chr2_1:2051150-2051169 | None:intergenic | 35.0% |
! | TTGTCTAGTTCCGAAAAACA+TGG | + | chr2_1:2051151-2051170 | None:intergenic | 35.0% |
!! | GTTTTTCGGAACTAGACAAT+TGG | - | chr2_1:2051152-2051171 | Msa0187350:CDS | 35.0% |
TATATCTGAGGGATGTTGAT+AGG | - | chr2_1:2051264-2051283 | Msa0187350:intron | 35.0% | |
AAAATGTTGAAGAGACTCTC+TGG | - | chr2_1:2051326-2051345 | Msa0187350:CDS | 35.0% | |
! | TGGTAATGAATTCGAAGAGT+TGG | - | chr2_1:2051385-2051404 | Msa0187350:CDS | 35.0% |
GGTCTGATTTCTATATCGTA+TGG | + | chr2_1:2051434-2051453 | None:intergenic | 35.0% | |
ACAAGATGTGATTCATCTTC+TGG | + | chr2_1:2051458-2051477 | None:intergenic | 35.0% | |
AAAGACCTCGAATACAGAAA+TGG | - | chr2_1:2051677-2051696 | Msa0187350:CDS | 35.0% | |
GATGTCCTTACTAATTCTTG+TGG | - | chr2_1:2051778-2051797 | Msa0187350:CDS | 35.0% | |
CTGTTCCACAAGAATTAGTA+AGG | + | chr2_1:2051786-2051805 | None:intergenic | 35.0% | |
AACAGTTTGTCACATGCATT+GGG | - | chr2_1:2051801-2051820 | Msa0187350:CDS | 35.0% | |
CATTGGGTATATTCCGTAAA+GGG | - | chr2_1:2051817-2051836 | Msa0187350:CDS | 35.0% | |
TTCCGTAAAGGGAAATTCAA+TGG | - | chr2_1:2051828-2051847 | Msa0187350:CDS | 35.0% | |
TGGAAGAGATACATCAAAGA+TGG | - | chr2_1:2051848-2051867 | Msa0187350:CDS | 35.0% | |
AAGAGATACATCAAAGATGG+AGG | - | chr2_1:2051851-2051870 | Msa0187350:CDS | 35.0% | |
AGCAGAAATATCAACTTCAG+TGG | - | chr2_1:2052094-2052113 | Msa0187350:intron | 35.0% | |
AATATCAACTTCAGTGGCAA+AGG | - | chr2_1:2052100-2052119 | Msa0187350:intron | 35.0% | |
AAGCTTAATACTCGACAGAT+AGG | - | chr2_1:2052232-2052251 | Msa0187350:intron | 35.0% | |
AATACTCGACAGATAGGTAT+TGG | - | chr2_1:2052238-2052257 | Msa0187350:intron | 35.0% | |
GTAACATCAATCTCATTTGC+TGG | + | chr2_1:2052447-2052466 | None:intergenic | 35.0% | |
! | CGATTCTTTTGTCTCTTCTA+AGG | + | chr2_1:2052487-2052506 | None:intergenic | 35.0% |
AATAACAATATTCCTCGGCA+TGG | + | chr2_1:2052573-2052592 | None:intergenic | 35.0% | |
! | TGCCGAGGAATATTGTTATT+TGG | - | chr2_1:2052573-2052592 | Msa0187350:CDS | 35.0% |
!! | GCCGAGGAATATTGTTATTT+GGG | - | chr2_1:2052574-2052593 | Msa0187350:CDS | 35.0% |
GCCCAAATAACAATATTCCT+CGG | + | chr2_1:2052578-2052597 | None:intergenic | 35.0% | |
TTTAGAAGTGATGGTAGACA+TGG | + | chr2_1:2052673-2052692 | None:intergenic | 35.0% | |
TGTCTACCATCACTTCTAAA+TGG | - | chr2_1:2052673-2052692 | Msa0187350:intron | 35.0% | |
ACCATCACTTCTAAATGGTT+TGG | - | chr2_1:2052678-2052697 | Msa0187350:intron | 35.0% | |
ACCAAACCATTTAGAAGTGA+TGG | + | chr2_1:2052682-2052701 | None:intergenic | 35.0% | |
TATAATAGTTGGGGAGACTT+TGG | + | chr2_1:2052745-2052764 | None:intergenic | 35.0% | |
ATAGCTTCATCCAAGTCAAA+TGG | + | chr2_1:2052921-2052940 | None:intergenic | 35.0% | |
TTATAAGGCGATTTGAAAGG+AGG | - | chr2_1:2052940-2052959 | Msa0187350:intron | 35.0% | |
!!! | CCCACTTTTTGGTTAAGTTA+TGG | - | chr2_1:2053065-2053084 | Msa0187350:CDS | 35.0% |
TTCTATATTCTCGGCCAAAT+AGG | + | chr2_1:2053131-2053150 | None:intergenic | 35.0% | |
!! | GATGGATTGACAATAGTTGA+GGG | + | chr2_1:2053168-2053187 | None:intergenic | 35.0% |
!! | TGATGGATTGACAATAGTTG+AGG | + | chr2_1:2053169-2053188 | None:intergenic | 35.0% |
TCAACTATTGTCAATCCATC+AGG | - | chr2_1:2053168-2053187 | Msa0187350:intron | 35.0% | |
TGAGGGAGAAGGAAAAATTA+TGG | - | chr2_1:2053348-2053367 | Msa0187350:intron | 35.0% | |
!! | TAAGCTTTGTGAGACTGTTT+TGG | - | chr2_1:2053669-2053688 | Msa0187350:intron | 35.0% |
AAGTTTGACAGCAAAGATCA+AGG | + | chr2_1:2053850-2053869 | None:intergenic | 35.0% | |
AGGGTAATAACTCTTTCTTG+TGG | + | chr2_1:2054146-2054165 | None:intergenic | 35.0% | |
GAATATGCAGGATTTCAAAG+AGG | - | chr2_1:2054175-2054194 | Msa0187350:intron | 35.0% | |
! | TTGTCTTCTGCATTTTTCAC+AGG | + | chr2_1:2054319-2054338 | None:intergenic | 35.0% |
! | GTGGAAATCATTTTCCTCTT+AGG | - | chr2_1:2054369-2054388 | Msa0187350:CDS | 35.0% |
TGAATTCTTCATTGCCTAAG+AGG | + | chr2_1:2054386-2054405 | None:intergenic | 35.0% | |
CTAATTATATCCGTGGCAAT+GGG | + | chr2_1:2054455-2054474 | None:intergenic | 35.0% | |
ACTAATTATATCCGTGGCAA+TGG | + | chr2_1:2054456-2054475 | None:intergenic | 35.0% | |
GAGGAGAATAGAGAAGGAAA+TGG | + | chr2_1:2048681-2048700 | None:intergenic | 40.0% | |
! | TGTTTTCTTCGTTAAGGCGA+CGG | + | chr2_1:2048703-2048722 | None:intergenic | 40.0% |
TTAGGGCTCTTCAACTCAAA+TGG | - | chr2_1:2048739-2048758 | Msa0187350:three_prime_UTR | 40.0% | |
ATGATAACAGTGAGCAGACA+CGG | - | chr2_1:2049073-2049092 | Msa0187350:CDS | 40.0% | |
! | AGAAGAATAGTTCTGCTAGC+AGG | + | chr2_1:2049171-2049190 | None:intergenic | 40.0% |
AGCAGAACTATTCTTCTCTC+TGG | - | chr2_1:2049174-2049193 | Msa0187350:intron | 40.0% | |
GGTAAATGAAACTAACCAGC+AGG | + | chr2_1:2049201-2049220 | None:intergenic | 40.0% | |
AGTCCAAGAACAACTAATCC+GGG | + | chr2_1:2049293-2049312 | None:intergenic | 40.0% | |
CAGTCCAAGAACAACTAATC+CGG | + | chr2_1:2049294-2049313 | None:intergenic | 40.0% | |
! | TGGATATCAAGTTTTCGCGA+AGG | - | chr2_1:2049312-2049331 | Msa0187350:CDS | 40.0% |
AAAGTAATGAGCCAAAGCCT+TGG | + | chr2_1:2049760-2049779 | None:intergenic | 40.0% | |
CTATGATTGCTGCAGATTCA+GGG | - | chr2_1:2049902-2049921 | Msa0187350:intron | 40.0% | |
CTGCAGATTCAGGGTAAATA+TGG | - | chr2_1:2049911-2049930 | Msa0187350:intron | 40.0% | |
GAATAGCAGAATTCGGAACA+GGG | + | chr2_1:2050017-2050036 | None:intergenic | 40.0% | |
AGAATAGCAGAATTCGGAAC+AGG | + | chr2_1:2050018-2050037 | None:intergenic | 40.0% | |
! | CTCCAAAGTTGATTCTGAAG+TGG | + | chr2_1:2050084-2050103 | None:intergenic | 40.0% |
TAGTTGCAGGAAAAATGCAC+AGG | - | chr2_1:2050448-2050467 | Msa0187350:CDS | 40.0% | |
!! | GGTATTGTCTGTTGATTTGC+AGG | - | chr2_1:2050584-2050603 | Msa0187350:CDS | 40.0% |
!! | ATTGTCTGTTGATTTGCAGG+GGG | - | chr2_1:2050587-2050606 | Msa0187350:CDS | 40.0% |
CAAAGCAATCCTACAAATCC+AGG | - | chr2_1:2050685-2050704 | Msa0187350:CDS | 40.0% | |
! | CAGAGGATTCCCATGTTTTT+CGG | - | chr2_1:2051138-2051157 | Msa0187350:CDS | 40.0% |
CAGATATAGCACAATGGGAT+AGG | + | chr2_1:2051252-2051271 | None:intergenic | 40.0% | |
ATCCCATTGTGCTATATCTG+AGG | - | chr2_1:2051252-2051271 | Msa0187350:intron | 40.0% | |
TCCCATTGTGCTATATCTGA+GGG | - | chr2_1:2051253-2051272 | Msa0187350:intron | 40.0% | |
TCCCTCAGATATAGCACAAT+GGG | + | chr2_1:2051257-2051276 | None:intergenic | 40.0% | |
ATCCCTCAGATATAGCACAA+TGG | + | chr2_1:2051258-2051277 | None:intergenic | 40.0% | |
TCTGGACCAATTCTGATTCT+TGG | - | chr2_1:2051344-2051363 | Msa0187350:CDS | 40.0% | |
AGATGTGATTCATCTTCTGG+AGG | + | chr2_1:2051455-2051474 | None:intergenic | 40.0% | |
ATGAATCACATCTTGTCAGC+TGG | - | chr2_1:2051462-2051481 | Msa0187350:intron | 40.0% | |
GTCATCGCAATCAAGATCAT+TGG | + | chr2_1:2051564-2051583 | None:intergenic | 40.0% | |
TGATCTTGATTGCGATGACT+TGG | - | chr2_1:2051565-2051584 | Msa0187350:CDS | 40.0% | |
! | TGACTTGGATTCCATATGTG+TGG | - | chr2_1:2051580-2051599 | Msa0187350:CDS | 40.0% |
CATTGTGTCTTCCACACATA+TGG | + | chr2_1:2051594-2051613 | None:intergenic | 40.0% | |
CATATGTGTGGAAGACACAA+TGG | - | chr2_1:2051592-2051611 | Msa0187350:CDS | 40.0% | |
GCTTTCCATTTCTGTATTCG+AGG | + | chr2_1:2051685-2051704 | None:intergenic | 40.0% | |
GAACAGTTTGTCACATGCAT+TGG | - | chr2_1:2051800-2051819 | Msa0187350:CDS | 40.0% | |
GCATTGGGTATATTCCGTAA+AGG | - | chr2_1:2051816-2051835 | Msa0187350:CDS | 40.0% | |
!! | GGATCAAGCTCTAAAATCTG+AGG | - | chr2_1:2051872-2051891 | Msa0187350:CDS | 40.0% |
! | AAGTGCTGCTCCAGTAAAAA+AGG | - | chr2_1:2052067-2052086 | Msa0187350:intron | 40.0% |
!!! | TCTGCTTCAGCCTTTTTTAC+TGG | + | chr2_1:2052080-2052099 | None:intergenic | 40.0% |
!! | AAAGGCAGGTGTTGAAAAAC+CGG | - | chr2_1:2052118-2052137 | Msa0187350:CDS | 40.0% |
! | CTTACAGAAGCTTTTGATGG+TGG | + | chr2_1:2052146-2052165 | None:intergenic | 40.0% |
! | AGGCTTACAGAAGCTTTTGA+TGG | + | chr2_1:2052149-2052168 | None:intergenic | 40.0% |
! | TCATTTGCTGGTATGACTTC+AGG | + | chr2_1:2052435-2052454 | None:intergenic | 40.0% |
TTAGAAGTCCTCCAGTGAAA+AGG | + | chr2_1:2052548-2052567 | None:intergenic | 40.0% | |
!! | ATATTGTTATTTGGGCCTCC+TGG | - | chr2_1:2052582-2052601 | Msa0187350:CDS | 40.0% |
!! | ATTGTTTTTCCAGTTCCAGG+AGG | + | chr2_1:2052600-2052619 | None:intergenic | 40.0% |
!! | AGCATTGTTTTTCCAGTTCC+AGG | + | chr2_1:2052603-2052622 | None:intergenic | 40.0% |
TGGAACTGGAAAAACAATGC+TGG | - | chr2_1:2052602-2052621 | Msa0187350:intron | 40.0% | |
TGGAAAAACAATGCTGGCAA+AGG | - | chr2_1:2052608-2052627 | Msa0187350:intron | 40.0% | |
!! | ATGAGGTTGATAGCATGCTT+GGG | - | chr2_1:2052772-2052791 | Msa0187350:intron | 40.0% |
GAATTTATGTCCCATTGGGA+CGG | - | chr2_1:2052843-2052862 | Msa0187350:intron | 40.0% | |
AATTTATGTCCCATTGGGAC+GGG | - | chr2_1:2052844-2052863 | Msa0187350:intron | 40.0% | |
! | TATTGGTTGCTGCAAGAACA+AGG | + | chr2_1:2052896-2052915 | None:intergenic | 40.0% |
TTGTTCTTGCAGCAACCAAT+AGG | - | chr2_1:2052895-2052914 | Msa0187350:intron | 40.0% | |
AACCAATAGGCCATTTGACT+TGG | - | chr2_1:2052908-2052927 | Msa0187350:intron | 40.0% | |
ATCCAAGTCAAATGGCCTAT+TGG | + | chr2_1:2052913-2052932 | None:intergenic | 40.0% | |
!!! | GAGGTGTGTCAATTAGCTTT+TGG | - | chr2_1:2052959-2052978 | Msa0187350:intron | 40.0% |
CAAAAAGTGGGTGACAAAGA+TGG | + | chr2_1:2053056-2053075 | None:intergenic | 40.0% | |
!! | CATCTTTGTCACCCACTTTT+TGG | - | chr2_1:2053054-2053073 | Msa0187350:intron | 40.0% |
CTACGATTCTCTCTCCTATT+TGG | - | chr2_1:2053114-2053133 | Msa0187350:CDS | 40.0% | |
ACTACCATCTGTTGAGAACA+GGG | - | chr2_1:2053456-2053475 | Msa0187350:CDS | 40.0% | |
! | TTTTCCCTGTTCTCAACAGA+TGG | + | chr2_1:2053463-2053482 | None:intergenic | 40.0% |
AACTATGGGCCTGTTTAGAT+TGG | - | chr2_1:2053622-2053641 | Msa0187350:intron | 40.0% | |
TGCTGAATCAACTCTCTAAC+TGG | + | chr2_1:2053910-2053929 | None:intergenic | 40.0% | |
GATTCAGCAAGAGAGGTTAA+AGG | - | chr2_1:2053921-2053940 | Msa0187350:intron | 40.0% | |
! | CATAATTTCTGGGGATTACC+AGG | + | chr2_1:2053948-2053967 | None:intergenic | 40.0% |
CTGCATATTCAATGGCCTAA+GGG | + | chr2_1:2054165-2054184 | None:intergenic | 40.0% | |
TTTCAAAGAGGCCAAGAATC+AGG | - | chr2_1:2054187-2054206 | Msa0187350:intron | 40.0% | |
ACACAATGGAATGAGCTGTA+TGG | - | chr2_1:2054254-2054273 | Msa0187350:CDS | 40.0% | |
! | CTGATATCAGCGTTGAGTGT+TGG | - | chr2_1:2048776-2048795 | Msa0187350:three_prime_UTR | 45.0% |
!! | TTGAGTGTTGGTGTTGGAGT+AGG | - | chr2_1:2048788-2048807 | Msa0187350:three_prime_UTR | 45.0% |
GTAGGAGTTGGAGTTGGAAT+TGG | - | chr2_1:2048806-2048825 | Msa0187350:three_prime_UTR | 45.0% | |
TGATAACAGTGAGCAGACAC+GGG | - | chr2_1:2049074-2049093 | Msa0187350:CDS | 45.0% | |
GACACACGAACAAGAGAAGA+TGG | + | chr2_1:2049222-2049241 | None:intergenic | 45.0% | |
GTCCAAGAACAACTAATCCG+GGG | + | chr2_1:2049292-2049311 | None:intergenic | 45.0% | |
!! | CGGATTAGTTGTTCTTGGAC+TGG | - | chr2_1:2049292-2049311 | Msa0187350:CDS | 45.0% |
! | GGCTTTGGCTCATTACTTTG+AGG | - | chr2_1:2049761-2049780 | Msa0187350:intron | 45.0% |
GCTATGATTGCTGCAGATTC+AGG | - | chr2_1:2049901-2049920 | Msa0187350:intron | 45.0% | |
TCACAAAGGGAGGAACCTAA+AGG | - | chr2_1:2050140-2050159 | Msa0187350:intron | 45.0% | |
!!! | AGGTTTTTTCGGCCTTGTTC+TGG | - | chr2_1:2050248-2050267 | Msa0187350:intron | 45.0% |
!!! | CCTGCAACTAGTTTTGCATG+TGG | + | chr2_1:2050438-2050457 | None:intergenic | 45.0% |
CCACATGCAAAACTAGTTGC+AGG | - | chr2_1:2050435-2050454 | Msa0187350:CDS | 45.0% | |
AAAATGCACAGGCAAAGCAG+TGG | - | chr2_1:2050459-2050478 | Msa0187350:CDS | 45.0% | |
!! | TTGTCTGTTGATTTGCAGGG+GGG | - | chr2_1:2050588-2050607 | Msa0187350:CDS | 45.0% |
CGCGAACCAAGAATCAGAAT+TGG | + | chr2_1:2051353-2051372 | None:intergenic | 45.0% | |
TGTCAGCTGGAAGTCTCAAT+TGG | - | chr2_1:2051475-2051494 | Msa0187350:intron | 45.0% | |
CTGGAAGTCTCAATTGGAAG+AGG | - | chr2_1:2051481-2051500 | Msa0187350:intron | 45.0% | |
GAACATAAAGATTCCGAGCG+TGG | - | chr2_1:2051992-2052011 | Msa0187350:intron | 45.0% | |
ACAACAGTTTCTACCACGCT+CGG | + | chr2_1:2052008-2052027 | None:intergenic | 45.0% | |
TGTTGTGAAACCAGCAGTGA+AGG | - | chr2_1:2052022-2052041 | Msa0187350:intron | 45.0% | |
!!! | GAAGCTTTTGATGGTGGAAC+CGG | + | chr2_1:2052140-2052159 | None:intergenic | 45.0% |
TAGTAATGCTTCCCCTACGA+AGG | - | chr2_1:2052517-2052536 | Msa0187350:CDS | 45.0% | |
!! | GATGAGGTTGATAGCATGCT+TGG | - | chr2_1:2052771-2052790 | Msa0187350:intron | 45.0% |
TTGGGCAACGAACAAGAGTT+GGG | - | chr2_1:2052790-2052809 | Msa0187350:intron | 45.0% | |
TTCTATAGAGGGACACCTGA+TGG | + | chr2_1:2053186-2053205 | None:intergenic | 45.0% | |
GACTACCATCTGTTGAGAAC+AGG | - | chr2_1:2053455-2053474 | Msa0187350:CDS | 45.0% | |
ACCATGACAGACGGATATAC+CGG | - | chr2_1:2053547-2053566 | Msa0187350:intron | 45.0% | |
CTTATCACGATAAGCGCTTG+TGG | - | chr2_1:2053752-2053771 | Msa0187350:intron | 45.0% | |
! | TGTGCACAACTGCTGCTTAT+CGG | - | chr2_1:2053884-2053903 | Msa0187350:intron | 45.0% |
! | GAGAGTTGATTCAGCAAGAG+AGG | - | chr2_1:2053914-2053933 | Msa0187350:intron | 45.0% |
CCTGCATATTCAATGGCCTA+AGG | + | chr2_1:2054166-2054185 | None:intergenic | 45.0% | |
CCTTAGGCCATTGAATATGC+AGG | - | chr2_1:2054163-2054182 | Msa0187350:intron | 45.0% | |
TGGAATGAGCTGTATGGAGA+AGG | - | chr2_1:2054260-2054279 | Msa0187350:CDS | 45.0% | |
AATGAGCTGTATGGAGAAGG+TGG | - | chr2_1:2054263-2054282 | Msa0187350:CDS | 45.0% | |
TGTATGGAGAAGGTGGTTCT+AGG | - | chr2_1:2054270-2054289 | Msa0187350:CDS | 45.0% | |
TTTCTTCGTTAAGGCGACGG+AGG | + | chr2_1:2048700-2048719 | None:intergenic | 50.0% | |
!! | TCAGCGTTGAGTGTTGGTGT+TGG | - | chr2_1:2048782-2048801 | Msa0187350:three_prime_UTR | 50.0% |
!! | GTTGGTGTTGGAGTAGGAGT+TGG | - | chr2_1:2048794-2048813 | Msa0187350:three_prime_UTR | 50.0% |
GTTGGAGTAGGAGTTGGAGT+TGG | - | chr2_1:2048800-2048819 | Msa0187350:three_prime_UTR | 50.0% | |
!! | GTCCCCGGATTAGTTGTTCT+TGG | - | chr2_1:2049287-2049306 | Msa0187350:CDS | 50.0% |
TTACCAACAGGTGCTTGCCA+AGG | - | chr2_1:2049740-2049759 | Msa0187350:CDS | 50.0% | |
TGAGGCCAAGTTGCTTCTCT+TGG | - | chr2_1:2049779-2049798 | Msa0187350:intron | 50.0% | |
GTAATCCTCCAAAGCTCCGT+AGG | - | chr2_1:2050623-2050642 | Msa0187350:CDS | 50.0% | |
! | GAAGCATTCCTACGGAGCTT+TGG | + | chr2_1:2050634-2050653 | None:intergenic | 50.0% |
TGCGCTTCAAAGGAGCTGAA+CGG | + | chr2_1:2051032-2051051 | None:intergenic | 50.0% | |
!! | GGTTCGCGAGTTCTAGATTC+TGG | - | chr2_1:2051365-2051384 | Msa0187350:CDS | 50.0% |
TGTGAAACCAGCAGTGAAGG+CGG | - | chr2_1:2052025-2052044 | Msa0187350:intron | 50.0% | |
TCAACTTCAGTGGCAAAGGC+AGG | - | chr2_1:2052104-2052123 | Msa0187350:intron | 50.0% | |
! | AAAAGGTCTGGCCTTCGTAG+GGG | + | chr2_1:2052531-2052550 | None:intergenic | 50.0% |
! | GAAAAGGTCTGGCCTTCGTA+GGG | + | chr2_1:2052532-2052551 | None:intergenic | 50.0% |
! | TGAAAAGGTCTGGCCTTCGT+AGG | + | chr2_1:2052533-2052552 | None:intergenic | 50.0% |
AGTCCTCCAGTGAAAAGGTC+TGG | + | chr2_1:2052543-2052562 | None:intergenic | 50.0% | |
!! | GGACTTCTAAAACCATGCCG+AGG | - | chr2_1:2052558-2052577 | Msa0187350:CDS | 50.0% |
TTATTTGGGCCTCCTGGAAC+TGG | - | chr2_1:2052588-2052607 | Msa0187350:CDS | 50.0% | |
AAGGCCATTGCAAAGGAAGC+TGG | - | chr2_1:2052627-2052646 | Msa0187350:intron | 50.0% | |
TGCTCCAGCTTCCTTTGCAA+TGG | + | chr2_1:2052634-2052653 | None:intergenic | 50.0% | |
CTTGGGCAACGAACAAGAGT+TGG | - | chr2_1:2052789-2052808 | Msa0187350:intron | 50.0% | |
TGGGCAACGAACAAGAGTTG+GGG | - | chr2_1:2052791-2052810 | Msa0187350:intron | 50.0% | |
TCCGGTATATCCGTCTGTCA+TGG | + | chr2_1:2053551-2053570 | None:intergenic | 50.0% | |
GCAAGAGAGGTTAAAGGACC+TGG | - | chr2_1:2053927-2053946 | Msa0187350:intron | 50.0% | |
GCTTGCAGCAACCTGATTCT+TGG | + | chr2_1:2054201-2054220 | None:intergenic | 50.0% | |
GAATGGGTGAGCTGACACAA+TGG | - | chr2_1:2054240-2054259 | Msa0187350:CDS | 50.0% | |
!!! | TGCTGTTTTGCCCATTGCCA+CGG | - | chr2_1:2054442-2054461 | Msa0187350:CDS | 50.0% |
GCGACGGAGGAGAATAGAGA+AGG | + | chr2_1:2048687-2048706 | None:intergenic | 55.0% | |
ATTCTTCTCTCTGGCCCTGC+TGG | - | chr2_1:2049183-2049202 | Msa0187350:intron | 55.0% | |
AAGCCTTGGCAAGCACCTGT+TGG | + | chr2_1:2049746-2049765 | None:intergenic | 55.0% | |
ACAGGTGCTTGCCAAGGCTT+TGG | - | chr2_1:2049746-2049765 | Msa0187350:CDS | 55.0% | |
GCACAGGCAAAGCAGTGGAA+TGG | - | chr2_1:2050464-2050483 | Msa0187350:CDS | 55.0% | |
! | GCATTCCTACGGAGCTTTGG+AGG | + | chr2_1:2050631-2050650 | None:intergenic | 55.0% |
ACTGGAGCAGCACTTTCAGC+AGG | + | chr2_1:2052062-2052081 | None:intergenic | 55.0% | |
! | CGAAGGCCAGACCTTTTCAC+TGG | - | chr2_1:2052534-2052553 | Msa0187350:CDS | 55.0% |
! | AGGCCAGACCTTTTCACTGG+AGG | - | chr2_1:2052537-2052556 | Msa0187350:CDS | 55.0% |
GCTGGCAAAGGCCATTGCAA+AGG | - | chr2_1:2052620-2052639 | Msa0187350:intron | 55.0% | |
! | TTGGGGAGCATGAAGCCATG+CGG | - | chr2_1:2052808-2052827 | Msa0187350:intron | 55.0% |
! | GACGGGCTCACGACAAAACA+AGG | - | chr2_1:2052861-2052880 | Msa0187350:intron | 55.0% |
GAACTCGCGACCATGACAGA+CGG | - | chr2_1:2053538-2053557 | Msa0187350:intron | 55.0% | |
CAGCTGGCTGTGCGCTTCAA+AGG | + | chr2_1:2051042-2051061 | None:intergenic | 60.0% | |
!! | CTTTGAAGCGCACAGCCAGC+TGG | - | chr2_1:2051040-2051059 | Msa0187350:intron | 60.0% |
GGACTTTCCGCCTTCACTGC+TGG | + | chr2_1:2052035-2052054 | None:intergenic | 60.0% | |
GCAGCACTTTCAGCAGGAGG+AGG | + | chr2_1:2052056-2052075 | None:intergenic | 60.0% | |
GGAGCAGCACTTTCAGCAGG+AGG | + | chr2_1:2052059-2052078 | None:intergenic | 60.0% | |
TGTCGTGAGCCCGTCCCAAT+GGG | + | chr2_1:2052856-2052875 | None:intergenic | 60.0% | |
TTGTCGTGAGCCCGTCCCAA+TGG | + | chr2_1:2052857-2052876 | None:intergenic | 60.0% | |
TGCTGCAAGCTTCTCTGCCG+AGG | - | chr2_1:2054211-2054230 | Msa0187350:intron | 60.0% | |
GCTGCAAGCTTCTCTGCCGA+GGG | - | chr2_1:2054212-2054231 | Msa0187350:intron | 60.0% | |
TCTGCCGAGGGAGCTGGAAT+GGG | - | chr2_1:2054224-2054243 | Msa0187350:intron | 60.0% | |
CTCACCCATTCCAGCTCCCT+CGG | + | chr2_1:2054231-2054250 | None:intergenic | 60.0% | |
AGCTTCTCTGCCGAGGGAGC+TGG | - | chr2_1:2054218-2054237 | Msa0187350:intron | 65.0% | |
CTCTGCCGAGGGAGCTGGAA+TGG | - | chr2_1:2054223-2054242 | Msa0187350:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2_1 | gene | 2048663 | 2054556 | 2048663 | ID=Msa0187350;Name=Msa0187350 |
chr2_1 | mRNA | 2048663 | 2054556 | 2048663 | ID=Msa0187350-mRNA-1;Parent=Msa0187350;Name=Msa0187350-mRNA-1;_AED=0.06;_eAED=0.06;_QI=95|0.92|0.93|1|1|1|15|234|859 |
chr2_1 | exon | 2048663 | 2049172 | 2048663 | ID=Msa0187350-mRNA-1:exon:958;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2049271 | 2049339 | 2049271 | ID=Msa0187350-mRNA-1:exon:957;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2049637 | 2049775 | 2049637 | ID=Msa0187350-mRNA-1:exon:956;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2050258 | 2050826 | 2050258 | ID=Msa0187350-mRNA-1:exon:955;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2051059 | 2051217 | 2051059 | ID=Msa0187350-mRNA-1:exon:954;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2051326 | 2051413 | 2051326 | ID=Msa0187350-mRNA-1:exon:953;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2051496 | 2051992 | 2051496 | ID=Msa0187350-mRNA-1:exon:952;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2052118 | 2052182 | 2052118 | ID=Msa0187350-mRNA-1:exon:951;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2052513 | 2052613 | 2052513 | ID=Msa0187350-mRNA-1:exon:950;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2052720 | 2052762 | 2052720 | ID=Msa0187350-mRNA-1:exon:949;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2053058 | 2053151 | 2053058 | ID=Msa0187350-mRNA-1:exon:948;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2053267 | 2053302 | 2053267 | ID=Msa0187350-mRNA-1:exon:947;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2053395 | 2053483 | 2053395 | ID=Msa0187350-mRNA-1:exon:946;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2054015 | 2054136 | 2054015 | ID=Msa0187350-mRNA-1:exon:945;Parent=Msa0187350-mRNA-1 |
chr2_1 | exon | 2054229 | 2054556 | 2054229 | ID=Msa0187350-mRNA-1:exon:944;Parent=Msa0187350-mRNA-1 |
chr2_1 | five_prime_UTR | 2054462 | 2054556 | 2054462 | ID=Msa0187350-mRNA-1:five_prime_utr;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2054229 | 2054461 | 2054229 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2054015 | 2054136 | 2054015 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2053395 | 2053483 | 2053395 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2053267 | 2053302 | 2053267 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2053058 | 2053151 | 2053058 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2052720 | 2052762 | 2052720 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2052513 | 2052613 | 2052513 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2052118 | 2052182 | 2052118 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2051496 | 2051992 | 2051496 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2051326 | 2051413 | 2051326 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2051059 | 2051217 | 2051059 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2050258 | 2050826 | 2050258 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2049637 | 2049775 | 2049637 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2049271 | 2049339 | 2049271 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | CDS | 2048897 | 2049172 | 2048897 | ID=Msa0187350-mRNA-1:cds;Parent=Msa0187350-mRNA-1 |
chr2_1 | three_prime_UTR | 2048663 | 2048896 | 2048663 | ID=Msa0187350-mRNA-1:three_prime_utr;Parent=Msa0187350-mRNA-1 |
Gene Sequence |
Protein sequence |