AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0191640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0191640 MtrunA17_Chr2g0281431 90.584 839 75 1 1 835 1 839 0.0 1482
Msa0191640 MtrunA17_Chr4g0047931 53.942 482 191 12 363 833 95 556 8.16e-129 397
Msa0191640 MtrunA17_Chr4g0047931 57.483 294 109 7 4 288 9 295 2.52e-89 293
Msa0191640 MtrunA17_Chr4g0047931 54.054 185 82 2 179 361 95 278 5.21e-43 165
Msa0191640 MtrunA17_Chr2g0308521 30.660 212 115 8 4 191 21 224 8.35e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0191640 AT1G61215.2 42.387 243 116 5 492 727 118 343 3.07e-41 158
Msa0191640 AT1G61215.2 43.333 120 60 3 44 156 34 152 4.14e-15 79.3
Msa0191640 AT1G61215.1 42.387 243 116 5 492 727 137 362 5.08e-41 157
Msa0191640 AT1G61215.1 50.625 160 70 4 4 156 14 171 1.11e-34 139
Msa0191640 AT2G42150.1 40.367 109 54 1 4 101 16 124 2.28e-15 80.9
Msa0191640 AT2G42150.1 32.847 137 89 2 631 764 273 409 2.50e-14 77.4
Msa0191640 AT3G60110.1 34.921 126 61 2 4 110 52 175 3.85e-14 77.0
Msa0191640 AT3G57980.1 41.000 100 53 3 633 731 298 392 1.18e-13 75.5
Msa0191640 AT3G57980.1 40.000 115 52 2 4 101 16 130 3.39e-13 73.9
Msa0191640 AT3G57980.2 40.000 115 52 2 4 101 16 130 3.46e-13 73.9
Msa0191640 AT3G57980.2 40.196 102 53 4 633 731 298 394 4.54e-12 70.1
Msa0191640 AT2G44430.1 37.895 95 58 1 634 727 312 406 3.57e-12 70.5
Msa0191640 AT2G44430.1 34.307 137 55 3 4 105 50 186 1.38e-11 68.6

Find 205 sgRNAs with CRISPR-Local

Find 669 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTTCTTCATGACATTTA+AGG 0.114278 2_1:+7253622 None:intergenic
ATTTAACTCTCTCCAATTTC+TGG 0.116999 2_1:+7256974 None:intergenic
ATTCAACTCTCACCAATTTC+TGG 0.140644 2_1:+7256146 None:intergenic
ACATTTACCTTCACAGAAAT+TGG 0.178276 2_1:-7257250 Msa0191640:CDS
AACGGAGAGGGAAGAGAAAA+AGG 0.204707 2_1:-7255907 Msa0191640:CDS
TTGCCTGGTCTTACACTTCT+TGG 0.213585 2_1:+7253743 None:intergenic
ACATTTACCTTCCCAGAAAT+TGG 0.213715 2_1:-7256986 Msa0191640:CDS
GATTTGCAACAACGGTATTC+TGG 0.224102 2_1:-7258441 Msa0191640:CDS
AATAGTACCTCAGGGGTAAA+AGG 0.234659 2_1:+7264090 None:intergenic
ACATTTACCATCCCAGAAAT+TGG 0.247654 2_1:-7256434 Msa0191640:CDS
ACATTTACCATCCCAGAAAT+TGG 0.267489 2_1:-7256158 Msa0191640:CDS
ATGTGAAGAATCGGCTTTAA+TGG 0.268812 2_1:+7253655 None:intergenic
ACATGTACCTTCGCAGAAAT+TGG 0.269177 2_1:-7256710 Msa0191640:CDS
CTGCGAAGGTACATGTGATA+TGG 0.292733 2_1:+7256717 None:intergenic
GATAATAAACTTATCCATAT+TGG 0.300905 2_1:+7253317 None:intergenic
AAGCTTAGTTTCGTTATTAT+CGG 0.303151 2_1:+7256849 None:intergenic
CGTGGACGGTGATGGGTAGA+TGG 0.303874 2_1:-7264218 Msa0191640:exon
GGCGTTGAAACCTGGGATTC+AGG 0.314819 2_1:+7256877 None:intergenic
CGGCAGATGGCGTTGAAACC+TGG 0.327929 2_1:+7256869 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.328172 2_1:+7256049 None:intergenic
TTAGTAGAATGTGAAACTTC+TGG 0.329727 2_1:+7256001 None:intergenic
GCCTTCCGTCGAAGACTTGA+TGG 0.337126 2_1:-7255656 Msa0191640:CDS
GGTAATTTCGTAGACTCATT+AGG 0.339504 2_1:+7253791 None:intergenic
CGGCAGATGCCGCTGGAACC+TGG 0.342790 2_1:+7256593 None:intergenic
CGGCAGACGCAGCTGGAACC+TGG 0.344074 2_1:+7256317 None:intergenic
CGGCAGACGCAGCTGGAACC+TGG 0.344074 2_1:+7257145 None:intergenic
GTCTACATGAGCAGAAGATT+TGG 0.347205 2_1:+7255766 None:intergenic
CTCTGGTTGATTCAATTGTT+CGG 0.351506 2_1:+7253975 None:intergenic
AAAGTTATAGTTAACCAATA+TGG 0.363318 2_1:-7253331 Msa0191640:three_prime_UTR
TCTCGTTCTTCTCAGCTTTG+AGG 0.365599 2_1:+7256773 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.367686 2_1:+7256325 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.367686 2_1:+7257153 None:intergenic
ATCCTTTGATGTTTCTTTAG+TGG 0.371469 2_1:+7256396 None:intergenic
TGGGAGGAGCTCCTCCTTGG+TGG 0.373960 2_1:-7264189 Msa0191640:CDS
GAGCGCTCTGGAGATTCAAT+TGG 0.376339 2_1:-7258036 Msa0191640:CDS
GGATTGTGGAAGAAATATTA+TGG 0.379577 2_1:-7255882 Msa0191640:CDS
TGGCGACTATGCCTCTTAGA+AGG 0.380669 2_1:+7253870 None:intergenic
TCCGGTACGGGACACGAGAC+TGG 0.380957 2_1:-7264158 Msa0191640:CDS
ACATGGGAGGAGCTCCTCCT+TGG 0.388138 2_1:-7264192 Msa0191640:CDS
TGTGAAGAATCGGCTTTAAT+GGG 0.388925 2_1:+7253656 None:intergenic
CGGAAGATGCAGCTGGAACC+TGG 0.391729 2_1:+7256041 None:intergenic
TCAGTAGATTGTGAAACTTC+AGG 0.392693 2_1:+7256277 None:intergenic
TCAGTAGATTGTGAAACTTC+AGG 0.392693 2_1:+7257105 None:intergenic
AATGTCATGAAGAAAGCTTT+TGG 0.408688 2_1:-7253617 Msa0191640:CDS
TTCAACTCTCACCAATTTCT+GGG 0.408744 2_1:+7256147 None:intergenic
TTTAACTCTCTCCAATTTCT+GGG 0.408843 2_1:+7256423 None:intergenic
TCGGTAGATTGCAAAACTTC+AGG 0.410370 2_1:+7256553 None:intergenic
GCTTACCGGTGTCGGAAAAC+CGG 0.410663 2_1:+7264394 None:intergenic
GCCGCTGGAACCTGGGATCC+AGG 0.413242 2_1:+7256601 None:intergenic
ACATGGACTTCGACACTATA+AGG 0.413827 2_1:-7254012 Msa0191640:CDS
GGCAGATAGGCCTTCCTTGG+TGG 0.414688 2_1:+7257212 None:intergenic
GGGAGGAGCTCCTCCTTGGT+GGG 0.417029 2_1:-7264188 Msa0191640:CDS
ATTTGCAACAACGGTATTCT+GGG 0.420187 2_1:-7258440 Msa0191640:CDS
GCCATCCTTCGATGTTTCCT+TGG 0.421394 2_1:+7256945 None:intergenic
CTCACAAAACGAGGACAAAC+TGG 0.423655 2_1:-7256627 Msa0191640:CDS
TTTAACTCTCTCCAATTTCT+GGG 0.430061 2_1:+7256975 None:intergenic
CAAGTCTCGGTATAGTTCTC+TGG 0.431082 2_1:+7253958 None:intergenic
CTCATGAAACGAGGACAAAC+TGG 0.434890 2_1:-7257179 Msa0191640:CDS
TGTTTCGTGTGTGAAACTTC+CGG 0.436007 2_1:+7256363 None:intergenic
TTATCATCGGCAGACGCAGC+TGG 0.437623 2_1:+7256310 None:intergenic
TTATCATCGGCAGACGCAGC+TGG 0.437623 2_1:+7257138 None:intergenic
TGGGATGGTAAATGTGATAC+TGG 0.437681 2_1:+7256166 None:intergenic
TGGGATGGTAAATGTGATAC+TGG 0.437681 2_1:+7256442 None:intergenic
CTCACGAAATGAGGACAAAC+TGG 0.441034 2_1:-7256903 Msa0191640:CDS
TACACTTTGATGTAAATTGT+AGG 0.444799 2_1:-7253253 Msa0191640:three_prime_UTR
TTCCTTTGATGTCTCTTTAG+CGG 0.445950 2_1:+7256120 None:intergenic
GGTGAGGGATTCTATTTGTA+AGG 0.446188 2_1:+7264603 None:intergenic
GGCAGATGCCGCTGGAACCT+GGG 0.447609 2_1:+7256594 None:intergenic
CACACGAAACAAGGACAAAC+TGG 0.447900 2_1:-7256075 Msa0191640:CDS
CACACGAAACAAGGACAAAC+TGG 0.447900 2_1:-7256351 Msa0191640:CDS
CGTTTCATGAGTGAAACTTC+CGG 0.449518 2_1:+7257191 None:intergenic
TTATCATCGGCAGATGCCGC+TGG 0.451602 2_1:+7256586 None:intergenic
GTAGAAGACTAGGGCATTGT+TGG 0.455570 2_1:+7253925 None:intergenic
ACGAGGACAAACTGGTCTCC+TGG 0.456758 2_1:-7256619 Msa0191640:CDS
ATAGAGTAAGCGTGAGAAGA+GGG 0.456916 2_1:+7264580 None:intergenic
TCCATGAGGAATTCAAGCTT+TGG 0.458554 2_1:+7256235 None:intergenic
CATACCCACGTCAGAGAAAC+CGG 0.462893 2_1:-7264413 Msa0191640:five_prime_UTR
CCTCATTCTTCTCAGCCTCA+AGG 0.463301 2_1:+7257313 None:intergenic
CCTATTTGACAACAGAAAAG+AGG 0.465236 2_1:-7254061 Msa0191640:intron
TCCGGCAGATAGGCCTTCCT+TGG 0.468617 2_1:+7257209 None:intergenic
TGTCGAAGTCCATGTGCTGC+TGG 0.468742 2_1:+7254020 None:intergenic
AGTTTCACATTCTACTAAGC+AGG 0.470786 2_1:-7255996 Msa0191640:CDS
CATTTCGTGAGTGAAACTTC+CGG 0.471724 2_1:+7256915 None:intergenic
GTGGACGGTGATGGGTAGAT+GGG 0.472049 2_1:-7264217 Msa0191640:exon
TTCCACAGAATGTGAAGAAT+CGG 0.472831 2_1:+7253646 None:intergenic
ATCCTTCGATGTTTCCTTGG+TGG 0.477301 2_1:+7256948 None:intergenic
GGAGCTCCTCCTTGGTGGGG+CGG 0.479990 2_1:-7264184 Msa0191640:CDS
AGCCGATTCTTCACATTCTG+TGG 0.481332 2_1:-7253648 Msa0191640:CDS
CTGGGAAGGTAAATGTGATA+CGG 0.488701 2_1:+7256993 None:intergenic
GGCAGACGCAGCTGGAACCT+GGG 0.489961 2_1:+7256318 None:intergenic
GGCAGACGCAGCTGGAACCT+GGG 0.489961 2_1:+7257146 None:intergenic
AGCGCTCTGGAGATTCAATT+GGG 0.492698 2_1:-7258035 Msa0191640:intron
TCCAGTCTCGTGTCCCGTAC+CGG 0.492867 2_1:+7264157 None:intergenic
TGGAAGAAATATTATGGAAG+TGG 0.494670 2_1:-7255876 Msa0191640:CDS
CCGTCGAAGACTTGATGGTC+AGG 0.495020 2_1:-7255651 Msa0191640:intron
GAGTGAAACTTCCGGCAGAT+AGG 0.495730 2_1:+7257199 None:intergenic
AAACTGGTCTCCTGGATCCC+AGG 0.496812 2_1:-7256611 Msa0191640:CDS
CAAAGGAAGGATTATCTGTC+GGG 0.497613 2_1:-7256105 Msa0191640:CDS
GTGTGAAACTTCCGGCAGAT+AGG 0.498762 2_1:+7256371 None:intergenic
ATAGTACCTCAGGGGTAAAA+GGG 0.499560 2_1:+7264091 None:intergenic
GAGTGAAACTTCCGGCAGAT+AGG 0.501201 2_1:+7256923 None:intergenic
TGCGAAGGTACATGTGATAT+GGG 0.505813 2_1:+7256718 None:intergenic
ACTCTCTCCAATTTCTGGGA+TGG 0.506480 2_1:+7256427 None:intergenic
AGTCCTCAAGGTTGAGAAGA+AGG 0.506878 2_1:-7257052 Msa0191640:CDS
ACTCTCTCCAATTTCTGTGA+AGG 0.509839 2_1:+7257243 None:intergenic
TAGGACAATCAATGCGTTCT+CGG 0.509930 2_1:+7264115 None:intergenic
GAGTGAAACTTCCGGCAGAT+AGG 0.510135 2_1:+7256647 None:intergenic
AAAATAAGGCTTACCGGTGT+CGG 0.510309 2_1:+7264386 None:intergenic
ACTCTCTCCAATTTCTGGGA+AGG 0.512135 2_1:+7256979 None:intergenic
GGCAGATGGCGTTGAAACCT+GGG 0.515132 2_1:+7256870 None:intergenic
AGTAGAACTTTCTTTACGCC+AGG 0.515174 2_1:+7255808 None:intergenic
TCTCATTCTGCTCGGCCTTG+AGG 0.515915 2_1:+7256497 None:intergenic
TGTAGTTTATTGAAGGAGGA+AGG 0.518229 2_1:-7253432 Msa0191640:three_prime_UTR
AAGAAAGCTATTGAGCGCTC+TGG 0.520819 2_1:-7258048 Msa0191640:CDS
ACATGAAGATTATGATGCAC+TGG 0.521987 2_1:+7253770 None:intergenic
AAAACTGCTCTCCTTCTAAG+AGG 0.523048 2_1:-7253881 Msa0191640:CDS
TGGCTTAGTTTCATTATCAT+CGG 0.525043 2_1:+7256021 None:intergenic
GGAGGAGCTCCTCCTTGGTG+GGG 0.528293 2_1:-7264187 Msa0191640:CDS
GACGTACACGTGGACGGTGA+TGG 0.528307 2_1:-7264226 Msa0191640:exon
ATCATTGCAAAGGCTGTTGG+TGG 0.531039 2_1:-7253713 Msa0191640:CDS
TTTGATGTAAATTGTAGGCA+AGG 0.533063 2_1:-7253248 Msa0191640:three_prime_UTR
TGTGAAGGTAAATGTGATGC+TGG 0.533695 2_1:+7257258 None:intergenic
AATGAACTTGAGTTAGATGC+AGG 0.533923 2_1:-7253393 Msa0191640:three_prime_UTR
AAAATCATTGCAAAGGCTGT+TGG 0.537560 2_1:-7253716 Msa0191640:CDS
ACCAAGGAAGGCCTATCTGC+CGG 0.540490 2_1:-7257210 Msa0191640:CDS
AGTTTCACAATCTACTGAGC+AGG 0.540791 2_1:-7256272 Msa0191640:CDS
AGTTTCACAATCTACTGAGC+AGG 0.540791 2_1:-7257100 Msa0191640:CDS
AAACTGGTTTCCTGAATCCC+AGG 0.541785 2_1:-7257163 Msa0191640:CDS
TCAAAGGATGGCCTATCTGC+CGG 0.543453 2_1:-7256382 Msa0191640:CDS
TCAAAGGATGGCCTATCTGC+CGG 0.543453 2_1:-7256658 Msa0191640:CDS
TCGAAGGATGGCCTATCTGC+CGG 0.543453 2_1:-7256934 Msa0191640:CDS
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 2_1:+7256297 None:intergenic
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 2_1:+7256573 None:intergenic
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 2_1:+7257125 None:intergenic
GTTTCGTTATTATCGGCAGA+TGG 0.547357 2_1:+7256856 None:intergenic
TATCCTTCTTCTCAACCTTG+AGG 0.547638 2_1:+7257049 None:intergenic
AAACTGGTCTCCTGAATCCC+AGG 0.547815 2_1:-7256059 Msa0191640:CDS
AAACTGGTCTCCTGAATCCC+AGG 0.547815 2_1:-7256335 Msa0191640:CDS
AAACTGGTCTCCTGAATCCC+AGG 0.547815 2_1:-7256887 Msa0191640:CDS
AGAGTAAGCGTGAGAAGAGG+GGG 0.548257 2_1:+7264582 None:intergenic
CTGCAACACCAGTGAAAGGA+AGG 0.551244 2_1:-7253553 Msa0191640:CDS
AATGCGTTCTCGGAGTTCAC+CGG 0.551510 2_1:+7264125 None:intergenic
TGATCTTCGAGTAGAAGACT+AGG 0.551667 2_1:+7253915 None:intergenic
ACGTACACGTGGACGGTGAT+GGG 0.551870 2_1:-7264225 Msa0191640:exon
TTGCGAAACTTTAGCCTGCT+CGG 0.552400 2_1:+7256534 None:intergenic
ACTCTCACCAATTTCTGGGA+TGG 0.553891 2_1:+7256151 None:intergenic
AATAGAGTAAGCGTGAGAAG+AGG 0.555901 2_1:+7264579 None:intergenic
ACTTTATATGAAATACAAGT+AGG 0.556142 2_1:-7255941 Msa0191640:CDS
TCCTGGATCCCAGGTTCCAG+CGG 0.557730 2_1:-7256602 Msa0191640:CDS
TTGGTGTAGTTTATTGAAGG+AGG 0.558471 2_1:-7253436 Msa0191640:three_prime_UTR
AAAATGAGGGAGAGTTTCAA+GGG 0.558959 2_1:-7253845 Msa0191640:CDS
TAGAGTAAGCGTGAGAAGAG+GGG 0.559235 2_1:+7264581 None:intergenic
TGGGAAGGTAAATGTGATAC+GGG 0.559327 2_1:+7256994 None:intergenic
ACCATCAAGTCTTCGACGGA+AGG 0.559496 2_1:+7255655 None:intergenic
CGAGACTGGAACGTCGTCGC+CGG 0.566409 2_1:-7264144 Msa0191640:CDS
ACCAAAGCTTGAATTCCTCA+TGG 0.567620 2_1:-7256236 Msa0191640:CDS
GAAGTTTCACTCACGAAATG+AGG 0.567743 2_1:-7256912 Msa0191640:CDS
GGAAGATGCAGCTGGAACCT+GGG 0.568210 2_1:+7256042 None:intergenic
GTTAAATCTTCCACCAAGGA+AGG 0.569733 2_1:-7257222 Msa0191640:CDS
TTATCATCGGAAGATGCAGC+TGG 0.573606 2_1:+7256034 None:intergenic
ATTCAGCTGATGTTATGTCC+TGG 0.574362 2_1:-7255826 Msa0191640:CDS
ACTCTCTCCAATTTCTGCGA+AGG 0.574819 2_1:+7256703 None:intergenic
GACAACTCTGCATCTTCACA+AGG 0.577577 2_1:-7253689 Msa0191640:CDS
TCAAAGGAAGGATTATCTGT+CGG 0.582759 2_1:-7256106 Msa0191640:CDS
ATCAGGGACGTACACGTGGA+CGG 0.585049 2_1:-7264232 Msa0191640:intron
AAAACCGGTTTCTCTGACGT+GGG 0.592498 2_1:+7264409 None:intergenic
GGAGTTTCACACACGAAACA+AGG 0.592533 2_1:-7256084 Msa0191640:CDS
GAAGTTTCACACACGAAACA+AGG 0.592533 2_1:-7256360 Msa0191640:CDS
ATCAAAGCTTGAAGTCCTCA+AGG 0.595488 2_1:-7256512 Msa0191640:CDS
ACCGGAAAACCGCCCCACCA+AGG 0.597321 2_1:+7264175 None:intergenic
TCCGGCGAGAATTTCGGGAA+TGG 0.599880 2_1:+7264443 None:intergenic
ACCTCAGGGGTAAAAGGGAT+AGG 0.601507 2_1:+7264096 None:intergenic
ATCAAAGATTGAAGACCTTG+AGG 0.601679 2_1:-7257328 Msa0191640:CDS
AAGACTGCAACACCAGTGAA+AGG 0.602633 2_1:-7253557 Msa0191640:CDS
GAAAATGATCCAGCAGCACA+TGG 0.603766 2_1:-7254029 Msa0191640:CDS
CCTTGAGGCTGAGAAGAATG+AGG 0.604647 2_1:-7257313 Msa0191640:CDS
GGATAAGTTTATTATCAAAG+TGG 0.605616 2_1:-7253310 Msa0191640:three_prime_UTR
ATCAAAGCTTGAAGTCCTCA+AGG 0.605753 2_1:-7257064 Msa0191640:CDS
GAACTTGAGTTAGATGCAGG+AGG 0.608296 2_1:-7253390 Msa0191640:three_prime_UTR
TTGCACTAAAGAAACATCAA+AGG 0.610129 2_1:-7256674 Msa0191640:CDS
TTCCACTAAAGAAACATCAA+AGG 0.611385 2_1:-7256398 Msa0191640:CDS
ACCATTCCCGAAATTCTCGC+CGG 0.614241 2_1:-7264444 Msa0191640:five_prime_UTR
ACTAAAGAAACATCAAAGGA+TGG 0.614875 2_1:-7256394 Msa0191640:CDS
ACCAAGGAAACATCGAAGGA+TGG 0.615920 2_1:-7256946 Msa0191640:CDS
AATAATCAGGGACGTACACG+TGG 0.616115 2_1:-7264236 Msa0191640:intron
TGGACGGTGATGGGTAGATG+GGG 0.616380 2_1:-7264216 Msa0191640:exon
TCTCATTCTTCTCATCCATG+AGG 0.618938 2_1:+7256221 None:intergenic
GAAAACCGGTTTCTCTGACG+TGG 0.620355 2_1:+7264408 None:intergenic
CCTGACCATCAAGTCTTCGA+CGG 0.624531 2_1:+7255651 None:intergenic
TTCCACCAAGGAAACATCGA+AGG 0.625809 2_1:-7256950 Msa0191640:CDS
ACTAAAGAAACATCAAAGGA+TGG 0.630887 2_1:-7256670 Msa0191640:CDS
GCTAAAGAGACATCAAAGGA+AGG 0.634567 2_1:-7256118 Msa0191640:CDS
TTCCGCTAAAGAGACATCAA+AGG 0.636984 2_1:-7256122 Msa0191640:CDS
TGGTGAGTAGCAGCAAGTCT+CGG 0.639685 2_1:+7253945 None:intergenic
AACTTGAGTTAGATGCAGGA+GGG 0.650685 2_1:-7253389 Msa0191640:three_prime_UTR
GATCTTCGAGTAGAAGACTA+GGG 0.651766 2_1:+7253916 None:intergenic
AAACCAAGAAGTGTAAGACC+AGG 0.662834 2_1:-7253746 Msa0191640:CDS
AGTATGAAGATTTGCAACAA+CGG 0.672440 2_1:-7258449 Msa0191640:CDS
GGACGGTGATGGGTAGATGG+GGG 0.676840 2_1:-7264215 Msa0191640:exon
GGAAAACCGCCCCACCAAGG+AGG 0.682090 2_1:+7264178 None:intergenic
GAGAGTTAAATCTTCCACCA+AGG 0.685418 2_1:-7256962 Msa0191640:CDS
GAGAGTTAAATCTTCCACCA+AGG 0.692239 2_1:-7257226 Msa0191640:CDS
GAAGTTTCACTCACAAAACG+AGG 0.701520 2_1:-7256636 Msa0191640:CDS
AATTAATAATAGTACCTCAG+GGG 0.721941 2_1:+7264083 None:intergenic
GAAGTTTCACTCATGAAACG+AGG 0.747697 2_1:-7257188 Msa0191640:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAATTAAATAATT+TGG - chr2_1:7253794-7253813 Msa0191640:CDS 0.0%
!! AATATAAATATAAAAAAAAA+AGG - chr2_1:7255856-7255875 Msa0191640:CDS 0.0%
!! TAAAATTTAAATAATTAATT+CGG + chr2_1:7256697-7256716 None:intergenic 0.0%
!!! ATTTTAAAAAAATATTTTAA+CGG - chr2_1:7256711-7256730 Msa0191640:CDS 0.0%
!! AAATTAAAATATTTAAATTT+AGG - chr2_1:7257524-7257543 Msa0191640:intron 0.0%
!! TATGTTATTATAAATAATCA+GGG - chr2_1:7253609-7253628 Msa0191640:CDS 10.0%
!! AAAAAAATAGATAATATGAA+TGG + chr2_1:7255916-7255935 None:intergenic 10.0%
!!! TCCTAAATATTTTTTTTTAA+AGG - chr2_1:7257331-7257350 Msa0191640:CDS 10.0%
!!! TCCTTTAAAAAAAAATATTT+AGG + chr2_1:7257335-7257354 None:intergenic 10.0%
!! TATTCATATAAAATATGAAT+TGG - chr2_1:7257355-7257374 Msa0191640:intron 10.0%
!! ATTCATATAAAATATGAATT+GGG - chr2_1:7257356-7257375 Msa0191640:intron 10.0%
!!! AAATTATTTACTACTTTTTT+AGG + chr2_1:7258135-7258154 None:intergenic 10.0%
!! TATTATTAACTAAACTAAAA+AGG - chr2_1:7258761-7258780 Msa0191640:intron 10.0%
!! ATTATTAACTAAACTAAAAA+GGG - chr2_1:7258762-7258781 Msa0191640:intron 10.0%
!!! TCTCATATATAAATTAATTT+TGG - chr2_1:7260147-7260166 Msa0191640:intron 10.0%
!! ATTAAAATTATATAAAAGTG+TGG - chr2_1:7260480-7260499 Msa0191640:intron 10.0%
!! AAGACAGAAAAAATAAAATA+AGG + chr2_1:7253488-7253507 None:intergenic 15.0%
!! GTATGTTATTATAAATAATC+AGG - chr2_1:7253608-7253627 Msa0191640:CDS 15.0%
!!! TTTGGATTTTTTTTTTTTGA+AGG - chr2_1:7253812-7253831 Msa0191640:CDS 15.0%
!!! TTTTTTTTTTTGAAGGATTT+TGG - chr2_1:7253819-7253838 Msa0191640:CDS 15.0%
!!! TTTTTGAACTTTATCATTAT+GGG + chr2_1:7253874-7253893 None:intergenic 15.0%
!!! TTTTTTGAACTTTATCATTA+TGG + chr2_1:7253875-7253894 None:intergenic 15.0%
!!! ATCATGTATAATGTTTTTTT+GGG - chr2_1:7253983-7254002 Msa0191640:CDS 15.0%
!!! ATTTTTAATTCGTAATTTGT+GGG + chr2_1:7254042-7254061 None:intergenic 15.0%
!!! TATTTTTAATTCGTAATTTG+TGG + chr2_1:7254043-7254062 None:intergenic 15.0%
!! CAAATTACGAATTAAAAATA+TGG - chr2_1:7254043-7254062 Msa0191640:CDS 15.0%
!!! TTTTTTAATGATTAGTGTTA+TGG - chr2_1:7254112-7254131 Msa0191640:intron 15.0%
!! TAGTATACTTTATTGTATTT+AGG + chr2_1:7254358-7254377 None:intergenic 15.0%
!!! TTGATGAATGTTTTTTTTTA+AGG - chr2_1:7254877-7254896 Msa0191640:intron 15.0%
!! TAATGTAAAATAACTACATT+AGG - chr2_1:7255157-7255176 Msa0191640:intron 15.0%
!! AATGTAAAATAACTACATTA+GGG - chr2_1:7255158-7255177 Msa0191640:intron 15.0%
!! CATATTTAATTCTTATACAT+AGG + chr2_1:7255615-7255634 None:intergenic 15.0%
!! TAACCAAAAATATATATTGA+AGG + chr2_1:7255824-7255843 None:intergenic 15.0%
!!! TTAATTTTTGACAATTTCTT+TGG - chr2_1:7256010-7256029 Msa0191640:CDS 15.0%
!!! TTTAAAATAAAAAAAGTCGT+TGG + chr2_1:7256344-7256363 None:intergenic 15.0%
!!! ACAAATAGTTTTTTTTTGTT+AGG - chr2_1:7256370-7256389 Msa0191640:CDS 15.0%
!!! ATTTTTAATGTTAATAAGTG+AGG - chr2_1:7256416-7256435 Msa0191640:CDS 15.0%
!!! TTAAAATTTAGGATACAATA+CGG + chr2_1:7257072-7257091 None:intergenic 15.0%
!!! CGCAATTTTTTTTAAAATTT+AGG + chr2_1:7257083-7257102 None:intergenic 15.0%
!!! CAAAAAAAGTTTTTTATTGA+AGG + chr2_1:7257175-7257194 None:intergenic 15.0%
!!! CAATTTTTATTAACTTCAAT+CGG + chr2_1:7257258-7257277 None:intergenic 15.0%
!! ATATAATAATAGAGGATAAA+GGG + chr2_1:7258738-7258757 None:intergenic 15.0%
!! AATATAATAATAGAGGATAA+AGG + chr2_1:7258739-7258758 None:intergenic 15.0%
!!! AAAAAATTGTGTTGTTTAAT+TGG - chr2_1:7259060-7259079 Msa0191640:intron 15.0%
!!! TTTTGTACAAAAATAATAGA+AGG - chr2_1:7259324-7259343 Msa0191640:intron 15.0%
!!! TATATAAGCTTTATATTTAG+TGG - chr2_1:7259669-7259688 Msa0191640:intron 15.0%
!! ATTAATTTATATATGAGAAG+CGG + chr2_1:7260145-7260164 None:intergenic 15.0%
!! TAAGATCAAAATTATTTGAT+AGG + chr2_1:7262532-7262551 None:intergenic 15.0%
!!! ATTTAACCTAATTCTAAAAT+GGG - chr2_1:7262933-7262952 Msa0191640:intron 15.0%
!! ATTTCATTACAAAAATACAT+AGG + chr2_1:7263046-7263065 None:intergenic 15.0%
!!! AGTTTTGTTAAATACTATAT+AGG - chr2_1:7263230-7263249 Msa0191640:intron 15.0%
!! AAAAATAAAATAAGGCTTAC+CGG + chr2_1:7253480-7253499 None:intergenic 20.0%
!!! TTTATTTTTTCTGTCTTTTC+CGG - chr2_1:7253491-7253510 Msa0191640:three_prime_UTR 20.0%
!!! TATTCTTATTTCAAACAACA+TGG - chr2_1:7253558-7253577 Msa0191640:CDS 20.0%
!! TAATTAATAATAGTACCTCA+GGG + chr2_1:7253778-7253797 None:intergenic 20.0%
!! TTAATTAATAATAGTACCTC+AGG + chr2_1:7253779-7253798 None:intergenic 20.0%
!! CAAAAAAACATTATACATGA+TGG + chr2_1:7253984-7254003 None:intergenic 20.0%
!!! CATCATGTATAATGTTTTTT+TGG - chr2_1:7253982-7254001 Msa0191640:CDS 20.0%
!!! TTAATGCTTTATTGTTGAAT+TGG - chr2_1:7254422-7254441 Msa0191640:intron 20.0%
!!! TAATGCTTTATTGTTGAATT+GGG - chr2_1:7254423-7254442 Msa0191640:intron 20.0%
!!! ATCCTATTCTAAATTTGTTT+TGG - chr2_1:7254649-7254668 Msa0191640:intron 20.0%
!! GCTAGAATAATATATATTGT+GGG - chr2_1:7254725-7254744 Msa0191640:intron 20.0%
!! AAATTACAAGAATCATTACA+AGG - chr2_1:7254768-7254787 Msa0191640:intron 20.0%
!! TAGATTAAAGAATCATTACA+AGG - chr2_1:7254798-7254817 Msa0191640:intron 20.0%
!!! TTTTTTGTAGTAGTTGATTT+CGG - chr2_1:7255049-7255068 Msa0191640:intron 20.0%
!!! AATTAATTTTCTCCTTTTGT+GGG + chr2_1:7255093-7255112 None:intergenic 20.0%
!!! AAATTAATTTTCTCCTTTTG+TGG + chr2_1:7255094-7255113 None:intergenic 20.0%
!!! GAATTAAATATGTTTTTGAG+AGG - chr2_1:7255623-7255642 Msa0191640:intron 20.0%
!!! AAGTCAAAGACATATTTTTA+AGG - chr2_1:7255757-7255776 Msa0191640:CDS 20.0%
!!! TGACCTTCAATATATATTTT+TGG - chr2_1:7255818-7255837 Msa0191640:CDS 20.0%
!! AAAAAAGGATCAAAACTAAA+AGG - chr2_1:7255871-7255890 Msa0191640:CDS 20.0%
!!! ACAATGTTTTGTTGTATAAA+TGG - chr2_1:7256294-7256313 Msa0191640:CDS 20.0%
!!! ACAAGAAGTATAATTTTAAG+CGG + chr2_1:7256907-7256926 None:intergenic 20.0%
!!! TGATAAGTTTAGGATTAAAA+CGG + chr2_1:7257284-7257303 None:intergenic 20.0%
!! AGATAAAACATGATAAGTTT+AGG + chr2_1:7257294-7257313 None:intergenic 20.0%
!! TTATATTACCAAACCAAAAA+AGG - chr2_1:7257600-7257619 Msa0191640:intron 20.0%
!!! ATCTTTTTTTTCTTTTGCTT+CGG + chr2_1:7257696-7257715 None:intergenic 20.0%
!! ATATATTTAATTGTTTCGCT+AGG - chr2_1:7258036-7258055 Msa0191640:CDS 20.0%
!! TATATTTAATTGTTTCGCTA+GGG - chr2_1:7258037-7258056 Msa0191640:CDS 20.0%
!!! ACTATTTTAAACTAATGGTT+AGG + chr2_1:7258239-7258258 None:intergenic 20.0%
!!! ACTCAACTATTTTAAACTAA+TGG + chr2_1:7258244-7258263 None:intergenic 20.0%
!! TAAAATAAGTGCTTATGAAA+TGG - chr2_1:7258478-7258497 Msa0191640:intron 20.0%
!!! AATTTTATAAAAGAGAGGTT+AGG + chr2_1:7258986-7259005 None:intergenic 20.0%
!!! TAACCTCTCTTTTATAAAAT+TGG - chr2_1:7258985-7259004 Msa0191640:intron 20.0%
!!! TTACCAATTTTATAAAAGAG+AGG + chr2_1:7258991-7259010 None:intergenic 20.0%
!!! ATAAAATTGGTAATCAGAAA+TGG - chr2_1:7258998-7259017 Msa0191640:intron 20.0%
!! AATTGGTAAATTTATGTAGA+TGG - chr2_1:7259077-7259096 Msa0191640:intron 20.0%
!!! AATTTATTGTTTCCTAGTTT+TGG - chr2_1:7259249-7259268 Msa0191640:intron 20.0%
!!! TTTTTGTTATAAACTTTTCC+TGG - chr2_1:7259468-7259487 Msa0191640:intron 20.0%
!!! ACTTCTATGAAATTTTCAAA+GGG + chr2_1:7259699-7259718 None:intergenic 20.0%
!!! AACTTCTATGAAATTTTCAA+AGG + chr2_1:7259700-7259719 None:intergenic 20.0%
!!! CCTAAATTTTTAAGAACAAA+CGG + chr2_1:7259938-7259957 None:intergenic 20.0%
!! TTTCAATACTCATTTCTATA+TGG - chr2_1:7260207-7260226 Msa0191640:intron 20.0%
!!! TTTACAATTACCTTTGTTTT+AGG + chr2_1:7260264-7260283 None:intergenic 20.0%
!! TAAGAATGTGTTGAATTATA+CGG + chr2_1:7260461-7260480 None:intergenic 20.0%
!! AAAAAAGATGATTGTGAAAA+TGG - chr2_1:7261382-7261401 Msa0191640:intron 20.0%
!! AAAAAAGATGATTGTGAAAA+TGG - chr2_1:7261382-7261401 Msa0191640:intron 20.0%
!! ACTTTATATGAAATACAAGT+AGG - chr2_1:7261916-7261935 Msa0191640:intron 20.0%
!!! ATTTTGATTTTTACCTATGA+TGG - chr2_1:7262337-7262356 Msa0191640:intron 20.0%
!!! AAGTTTTTTTTTTTCCACAT+AGG - chr2_1:7262652-7262671 Msa0191640:intron 20.0%
!!! ACACATGTATATTTTTGTAA+CGG + chr2_1:7262708-7262727 None:intergenic 20.0%
!!! CATTTTAGAATTAGGTTAAA+TGG + chr2_1:7262934-7262953 None:intergenic 20.0%
!!! CATTTAACCTAATTCTAAAA+TGG - chr2_1:7262932-7262951 Msa0191640:intron 20.0%
!! TAAACAACTTAACAAGTTAA+AGG - chr2_1:7263154-7263173 Msa0191640:intron 20.0%
!! AAAGTTATAGTTAACCAATA+TGG - chr2_1:7264526-7264545 Msa0191640:five_prime_UTR 20.0%
!! GATAATAAACTTATCCATAT+TGG + chr2_1:7264543-7264562 None:intergenic 20.0%
!!! TTTTGCTGTCGAAAAAAATA+AGG + chr2_1:7253354-7253373 None:intergenic 25.0%
! TTTATAATAACATACGCACA+CGG + chr2_1:7253603-7253622 None:intergenic 25.0%
! AATTAATAATAGTACCTCAG+GGG + chr2_1:7253777-7253796 None:intergenic 25.0%
! CATTATGGGAAAAAACAAAA+AGG + chr2_1:7253860-7253879 None:intergenic 25.0%
!!! GTTTATTGTTTTGTTTGTAG+TGG - chr2_1:7253921-7253940 Msa0191640:CDS 25.0%
! AACAAAAGTAGAAAACACAT+TGG + chr2_1:7253955-7253974 None:intergenic 25.0%
! AAACATTATACATGATGGTT+AGG + chr2_1:7253979-7253998 None:intergenic 25.0%
! TAAAAGAATAGGAAAAAGAG+AGG - chr2_1:7254145-7254164 Msa0191640:intron 25.0%
! AAAAGAATAGGAAAAAGAGA+GGG - chr2_1:7254146-7254165 Msa0191640:intron 25.0%
!!! AAGAGAGGGTATTAAATAAT+AGG - chr2_1:7254160-7254179 Msa0191640:intron 25.0%
!!! AGAGAGGGTATTAAATAATA+GGG - chr2_1:7254161-7254180 Msa0191640:intron 25.0%
! TCTTGTTAACTTATGCTATA+AGG - chr2_1:7254184-7254203 Msa0191640:intron 25.0%
! CTTGTTAACTTATGCTATAA+GGG - chr2_1:7254185-7254204 Msa0191640:intron 25.0%
!! TTATGAATGCACAATTTTCA+AGG + chr2_1:7254243-7254262 None:intergenic 25.0%
!! TTACGCATTTGACATATTTT+TGG + chr2_1:7254604-7254623 None:intergenic 25.0%
!! AGCCAAAACAAATTTAGAAT+AGG + chr2_1:7254654-7254673 None:intergenic 25.0%
!!! AATATAAACTTTTGAGAGCA+TGG - chr2_1:7254679-7254698 Msa0191640:intron 25.0%
!!! ACCCTATTCTAAATTTGTTT+TGG - chr2_1:7254703-7254722 Msa0191640:intron 25.0%
!! GCCAAAACAAATTTAGAATA+GGG + chr2_1:7254653-7254672 None:intergenic 25.0%
!! AGCCAAAACAAATTTAGAAT+AGG + chr2_1:7254654-7254673 None:intergenic 25.0%
! GGCTAGAATAATATATATTG+TGG - chr2_1:7254724-7254743 Msa0191640:intron 25.0%
! GAATAATATATATTGTGGGA+CGG - chr2_1:7254729-7254748 Msa0191640:intron 25.0%
! ATTTAAAAACTGTCTACACA+TGG - chr2_1:7254979-7254998 Msa0191640:intron 25.0%
!!! AGACTTTAACTTTTCTCTTT+AGG - chr2_1:7255120-7255139 Msa0191640:intron 25.0%
!!! GACTTTAACTTTTCTCTTTA+GGG - chr2_1:7255121-7255140 Msa0191640:intron 25.0%
!!! AACGTGTAAAGATTTGTTTT+AGG + chr2_1:7255287-7255306 None:intergenic 25.0%
!!! AAACGTGTAAAGATTTGTTA+AGG + chr2_1:7255446-7255465 None:intergenic 25.0%
!! TAACAAATCTTTACACGTTT+TGG - chr2_1:7255446-7255465 Msa0191640:intron 25.0%
! TCATTGCATAACATATATAG+AGG - chr2_1:7255492-7255511 Msa0191640:intron 25.0%
! ATATATATTGAAGGTCATGT+AGG + chr2_1:7255815-7255834 None:intergenic 25.0%
!!! ATTTGCTTTTAATAATTCCG+AGG - chr2_1:7255981-7256000 Msa0191640:CDS 25.0%
! TCAAAAATTAAAGAATGCCT+CGG + chr2_1:7256001-7256020 None:intergenic 25.0%
! GCTTCATAGAAAAATAGTTA+AGG + chr2_1:7256582-7256601 None:intergenic 25.0%
!! TTTACTCTTCATCTTTTTCT+AGG + chr2_1:7256799-7256818 None:intergenic 25.0%
! ATTATACTTCTTGTGAATGA+AGG - chr2_1:7256913-7256932 Msa0191640:CDS 25.0%
!! ATAAGTTTAGGATTAAAACG+GGG + chr2_1:7257282-7257301 None:intergenic 25.0%
!! GATAAGTTTAGGATTAAAAC+GGG + chr2_1:7257283-7257302 None:intergenic 25.0%
! ACATATTTCAACTAAGTAAG+TGG + chr2_1:7258874-7258893 None:intergenic 25.0%
! ATTAGAACAAACAAAGCAAA+AGG + chr2_1:7258949-7258968 None:intergenic 25.0%
!! TTTTTAATCCTATGCTTACT+AGG + chr2_1:7259042-7259061 None:intergenic 25.0%
!!! CTTAGAGATATTACTTTTGT+AGG - chr2_1:7259373-7259392 Msa0191640:intron 25.0%
!! AGAGACTATAAGATTTTACT+CGG - chr2_1:7259640-7259659 Msa0191640:intron 25.0%
! CCGTTTGTTCTTAAAAATTT+AGG - chr2_1:7259935-7259954 Msa0191640:intron 25.0%
! AAAAAAAATTATTAGCCGAG+TGG - chr2_1:7260052-7260071 Msa0191640:intron 25.0%
! AAGAATGTGTTGAATTATAC+GGG + chr2_1:7260460-7260479 None:intergenic 25.0%
! GAAAAAGATGATTGTGAAAA+TGG - chr2_1:7260566-7260585 Msa0191640:intron 25.0%
! AAAAATCATGACTGTGAAAA+TGG - chr2_1:7260830-7260849 Msa0191640:intron 25.0%
! AAGCTTAGTTTCGTTATTAT+CGG + chr2_1:7261011-7261030 None:intergenic 25.0%
! AAAAAACATGGTTGTGAAAA+TGG - chr2_1:7261106-7261125 Msa0191640:intron 25.0%
!!! AGTTTTGAATGGAGATAATT+TGG - chr2_1:7261888-7261907 Msa0191640:intron 25.0%
!!! GATTCTATTTTTGAAACTGA+AGG - chr2_1:7262171-7262190 Msa0191640:intron 25.0%
! TTGTTATGGTCAAAATATGA+GGG - chr2_1:7262403-7262422 Msa0191640:intron 25.0%
! AAATTATTTGATAGGACTTG+AGG + chr2_1:7262524-7262543 None:intergenic 25.0%
!!! CTTCTAACCATTTTAGAATT+AGG - chr2_1:7262796-7262815 Msa0191640:intron 25.0%
!! CATATAGCCTAATTCTAAAA+TGG + chr2_1:7262806-7262825 None:intergenic 25.0%
! TAGAATTAGGTTAAATGGTT+TGG + chr2_1:7262929-7262948 None:intergenic 25.0%
! AATGAAATGTGTGTGAAAAA+TGG - chr2_1:7263058-7263077 Msa0191640:intron 25.0%
!! TTAAGTTGTTTAATTGTACC+TGG + chr2_1:7263146-7263165 None:intergenic 25.0%
! CTCATTATTAACTTAGTGTA+TGG - chr2_1:7263477-7263496 Msa0191640:intron 25.0%
! TATTAACTTAGTGTATGGTA+TGG - chr2_1:7263482-7263501 Msa0191640:intron 25.0%
!! AACAAAGTAGTAGTGATTTT+AGG - chr2_1:7264338-7264357 Msa0191640:intron 25.0%
!!! TGATTTTAGGTTTAACGAAT+AGG - chr2_1:7264351-7264370 Msa0191640:intron 25.0%
!!! TTTTTGGTGTAGTTTATTGA+AGG - chr2_1:7264418-7264437 Msa0191640:five_prime_UTR 25.0%
! GGATAAGTTTATTATCAAAG+TGG - chr2_1:7264547-7264566 Msa0191640:five_prime_UTR 25.0%
! TACACTTTGATGTAAATTGT+AGG - chr2_1:7264604-7264623 Msa0191640:five_prime_UTR 25.0%
!!! TAGTTTTTGTTGGTTTAAGG+TGG + chr2_1:7253394-7253413 None:intergenic 30.0%
!!! TGGTAGTTTTTGTTGGTTTA+AGG + chr2_1:7253397-7253416 None:intergenic 30.0%
! TCTTATTTCAAACAACATGG+CGG - chr2_1:7253561-7253580 Msa0191640:CDS 30.0%
! GTAAGAGAGCATAAAAGAAT+AGG - chr2_1:7254134-7254153 Msa0191640:intron 30.0%
!!! TTTGACATATTTTTGGTCGT+TGG + chr2_1:7254597-7254616 None:intergenic 30.0%
CTACACATGGATCAATTTAA+TGG - chr2_1:7254992-7255011 Msa0191640:intron 30.0%
!! GCAATGTCAATGGATTATAT+CGG + chr2_1:7255248-7255267 None:intergenic 30.0%
AAACAAATCTTTACACGTTC+CGG - chr2_1:7255288-7255307 Msa0191640:intron 30.0%
!! GAACGTGTAAAGATTTGTTA+AGG + chr2_1:7255367-7255386 None:intergenic 30.0%
TAACAAATCTTTACACGTTC+TGG - chr2_1:7255367-7255386 Msa0191640:intron 30.0%
TGAGCTTAACTCAATTGATT+GGG - chr2_1:7255390-7255409 Msa0191640:intron 30.0%
CATAACATATATAGAGGTTG+AGG - chr2_1:7255498-7255517 Msa0191640:intron 30.0%
TAAGGTAATGCTTCATATAC+AGG - chr2_1:7255775-7255794 Msa0191640:CDS 30.0%
AAGGTAATGCTTCATATACA+GGG - chr2_1:7255776-7255795 Msa0191640:CDS 30.0%
! TTCATATACAGGGGTATAAA+AGG - chr2_1:7255786-7255805 Msa0191640:CDS 30.0%
TGTTAATAAGTGAGGTCTTA+AGG - chr2_1:7256424-7256443 Msa0191640:CDS 30.0%
!! AACTATTTTTCTATGAAGCC+CGG - chr2_1:7256583-7256602 Msa0191640:CDS 30.0%
AATTAATTCGGATACTTCGT+GGG + chr2_1:7256685-7256704 None:intergenic 30.0%
TAATTAATTCGGATACTTCG+TGG + chr2_1:7256686-7256705 None:intergenic 30.0%
AGATGAAGAGTAAAAAAGTG+AGG - chr2_1:7256805-7256824 Msa0191640:CDS 30.0%
!!! TTTTTTGCATAATCATCACG+CGG - chr2_1:7257188-7257207 Msa0191640:CDS 30.0%
TAACTTTCTGATGTATCCTA+AGG + chr2_1:7257644-7257663 None:intergenic 30.0%
TTAATATTTACTCCCTTGTC+CGG - chr2_1:7258189-7258208 Msa0191640:intron 30.0%
TAAACTAATGGTTAGGAAGT+TGG + chr2_1:7258232-7258251 None:intergenic 30.0%
CACGTATCTTAACATATGTT+TGG + chr2_1:7258313-7258332 None:intergenic 30.0%
AAGATTAAGTTACAAGAGCA+AGG + chr2_1:7258459-7258478 None:intergenic 30.0%
ACAACTTGACAACAAAAAAG+TGG + chr2_1:7258539-7258558 None:intergenic 30.0%
ACATTAGTGTATATGACACA+TGG + chr2_1:7258814-7258833 None:intergenic 30.0%
TGTGTCATATACACTAATGT+TGG - chr2_1:7258814-7258833 Msa0191640:intron 30.0%
AGATAAATCCTAGTAAGCAT+AGG - chr2_1:7259031-7259050 Msa0191640:intron 30.0%
GAATGACAAGAAAACACAAA+AGG + chr2_1:7259108-7259127 None:intergenic 30.0%
AGTATGAAGATTTGCAACAA+CGG - chr2_1:7259408-7259427 Msa0191640:intron 30.0%
AAATGTACTAACAAGTAACC+AGG + chr2_1:7259489-7259508 None:intergenic 30.0%
!!! ATTTTTTGTATGAGGAGCTT+AGG - chr2_1:7259765-7259784 Msa0191640:intron 30.0%
!! ATTCAATTGGGTTAGTTTCA+TGG - chr2_1:7259834-7259853 Msa0191640:intron 30.0%
TAAAACTAACTTACACCACT+CGG + chr2_1:7260070-7260089 None:intergenic 30.0%
! AATGAGTTTTCATTGGAAGT+CGG + chr2_1:7260095-7260114 None:intergenic 30.0%
ATTGAAGAGACCTAAAACAA+AGG - chr2_1:7260251-7260270 Msa0191640:intron 30.0%
GTAAAAGGATTTACAAGTGT+TGG + chr2_1:7260320-7260339 None:intergenic 30.0%
ACATTTACCTTCACAGAAAT+TGG - chr2_1:7260607-7260626 Msa0191640:intron 30.0%
TTTAACTCTCTCCAATTTCT+GGG + chr2_1:7260621-7260640 None:intergenic 30.0%
ATTTAACTCTCTCCAATTTC+TGG + chr2_1:7260622-7260641 None:intergenic 30.0%
TTGCACTAAAGAAACATCAA+AGG - chr2_1:7261183-7261202 Msa0191640:intron 30.0%
ACTAAAGAAACATCAAAGGA+TGG - chr2_1:7261187-7261206 Msa0191640:intron 30.0%
!!! ATCTTTTTTCTCATTCTGCT+CGG + chr2_1:7261371-7261390 None:intergenic 30.0%
TTTAACTCTCTCCAATTTCT+GGG + chr2_1:7260621-7260640 None:intergenic 30.0%
!! TTTTAACTCTCTCCAATTTC+TGG + chr2_1:7261438-7261457 None:intergenic 30.0%
TTCCACTAAAGAAACATCAA+AGG - chr2_1:7261459-7261478 Msa0191640:intron 30.0%
ATCCTTTGATGTTTCTTTAG+TGG + chr2_1:7261188-7261207 None:intergenic 30.0%
ACTAAAGAAACATCAAAGGA+TGG - chr2_1:7261187-7261206 Msa0191640:intron 30.0%
TGGCTTAGTTTCATTATCAT+CGG + chr2_1:7261839-7261858 None:intergenic 30.0%
TTAGTAGAATGTGAAACTTC+TGG + chr2_1:7261859-7261878 None:intergenic 30.0%
AAGTAGGATGTCGTAAAAAA+CGG - chr2_1:7261932-7261951 Msa0191640:intron 30.0%
GGATTGTGGAAGAAATATTA+TGG - chr2_1:7261975-7261994 Msa0191640:intron 30.0%
TGGAAGAAATATTATGGAAG+TGG - chr2_1:7261981-7262000 Msa0191640:intron 30.0%
TCTAACAAAGTAACCATCAT+AGG + chr2_1:7262353-7262372 None:intergenic 30.0%
ATAGTTGTTTGATGTTCTCT+AGG - chr2_1:7262374-7262393 Msa0191640:intron 30.0%
TAGTTGTTTGATGTTCTCTA+GGG - chr2_1:7262375-7262394 Msa0191640:intron 30.0%
! CTTGTTATGGTCAAAATATG+AGG - chr2_1:7262402-7262421 Msa0191640:intron 30.0%
! TCTCACTTATGTTTTACTCA+CGG + chr2_1:7262555-7262574 None:intergenic 30.0%
TAGAATTAGGCTATATGACT+TGG - chr2_1:7262809-7262828 Msa0191640:intron 30.0%
ATACAGCTTAAAAGAGTTGT+TGG - chr2_1:7263097-7263116 Msa0191640:intron 30.0%
TTGTTTAATTGTACCTGGTT+GGG + chr2_1:7263141-7263160 None:intergenic 30.0%
AACTTAACAAGTTAAAGGAC+TGG - chr2_1:7263159-7263178 Msa0191640:intron 30.0%
TAAATACTATATAGGCTGTG+AGG - chr2_1:7263238-7263257 Msa0191640:intron 30.0%
AAGAAGTTCAAGAATAAGGT+CGG + chr2_1:7263284-7263303 None:intergenic 30.0%
GAGAAAGAAGTTCAAGAATA+AGG + chr2_1:7263288-7263307 None:intergenic 30.0%
CTCTTTGACGAAAAAAACAT+AGG + chr2_1:7263411-7263430 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr2_1:7263553-7263572 Msa0191640:intron 30.0%
ACAAAAGAGATCAGTGAATA+TGG + chr2_1:7263602-7263621 None:intergenic 30.0%
ATTCTACATTGGCAACTTAA+TGG + chr2_1:7263684-7263703 None:intergenic 30.0%
CAAAGATGCAAATTCTACAT+TGG + chr2_1:7263695-7263714 None:intergenic 30.0%
CAACAGAAAAATCATTGCAA+AGG - chr2_1:7264134-7264153 Msa0191640:CDS 30.0%
AGCTTTCTTCATGACATTTA+AGG + chr2_1:7264238-7264257 None:intergenic 30.0%
! AATGTCATGAAGAAAGCTTT+TGG - chr2_1:7264240-7264259 Msa0191640:intron 30.0%
TTTGGTAGACAGAAAAAAGT+CGG - chr2_1:7264258-7264277 Msa0191640:intron 30.0%
! TACAAAGATTTTCTCCGTTT+TGG - chr2_1:7264387-7264406 Msa0191640:intron 30.0%
CAAAAAACACCTAACCAAAA+CGG + chr2_1:7264404-7264423 None:intergenic 30.0%
! CTAACTCAAGTTCATTTTGT+TGG + chr2_1:7264460-7264479 None:intergenic 30.0%
!!! TTTGTTTTTGCTAGCATCAA+AGG - chr2_1:7264578-7264597 Msa0191640:five_prime_UTR 30.0%
!!! TTGTTTTTGCTAGCATCAAA+GGG - chr2_1:7264579-7264598 Msa0191640:five_prime_UTR 30.0%
TTTGATGTAAATTGTAGGCA+AGG - chr2_1:7264609-7264628 Msa0191640:five_prime_UTR 30.0%
!!! GGTTTAAGGTGGTTTTAAAG+AGG + chr2_1:7253383-7253402 None:intergenic 35.0%
ATCCTTATATTGTGCCCTAA+GGG - chr2_1:7254316-7254335 Msa0191640:intron 35.0%
!!! ATATTTTTGGTCGTTGGATC+AGG + chr2_1:7254591-7254610 None:intergenic 35.0%
GACAATTTACAACCCACAAA+AGG - chr2_1:7255078-7255097 Msa0191640:intron 35.0%
AATTGTGTCAGCAATGTCAA+TGG + chr2_1:7255258-7255277 None:intergenic 35.0%
TGAGCTTAACTCAATTGGTT+GGG - chr2_1:7255311-7255330 Msa0191640:intron 35.0%
GTGAGCTTAACTCAATTGAT+TGG - chr2_1:7255389-7255408 Msa0191640:intron 35.0%
TTTGGTGAGCTTAACTCAAT+TGG - chr2_1:7255464-7255483 Msa0191640:intron 35.0%
TGAGCTTAACTCAATTGGTT+AGG - chr2_1:7255311-7255330 Msa0191640:intron 35.0%
CGGGCAGATTAAAAATAAGT+AGG + chr2_1:7255684-7255703 None:intergenic 35.0%
AGGTAATGCTTCATATACAG+GGG - chr2_1:7255777-7255796 Msa0191640:CDS 35.0%
TAAGTATCCTTGTGTATCTG+CGG + chr2_1:7256753-7256772 None:intergenic 35.0%
GAGGCAATGTTGTAAACATT+CGG - chr2_1:7256824-7256843 Msa0191640:CDS 35.0%
! ATTTAGGATACAATACGGCT+AGG + chr2_1:7257067-7257086 None:intergenic 35.0%
ACCAAACCAAAAAAGGTCTT+CGG - chr2_1:7257607-7257626 Msa0191640:intron 35.0%
!! CGGTTTGTTCATTCTTGTTT+TGG + chr2_1:7257676-7257695 None:intergenic 35.0%
TTCTTATCCTACACACCAAA+AGG - chr2_1:7258358-7258377 Msa0191640:intron 35.0%
TCTTATCCTACACACCAAAA+GGG - chr2_1:7258359-7258378 Msa0191640:intron 35.0%
GTCCAATGAAAATCCATCAT+TGG - chr2_1:7258425-7258444 Msa0191640:intron 35.0%
!!! GTCCAATGATGGATTTTCAT+TGG + chr2_1:7258430-7258449 None:intergenic 35.0%
ATTTGCAACAACGGTATTCT+GGG - chr2_1:7259417-7259436 Msa0191640:intron 35.0%
! TTTTTAATCCAGTAGCCTAG+TGG - chr2_1:7259521-7259540 Msa0191640:intron 35.0%
!! ACCCTTTGAGGTGAATAATT+GGG - chr2_1:7259554-7259573 Msa0191640:intron 35.0%
TGTTATGTCTCATTGCATGA+TGG - chr2_1:7259723-7259742 Msa0191640:intron 35.0%
ATGGTAAAATTGCAATGCCA+GGG - chr2_1:7259742-7259761 Msa0191640:intron 35.0%
GACTTCCAATGAAAACTCAT+TGG - chr2_1:7260094-7260113 Msa0191640:intron 35.0%
GGTTACAAAATAGGCTTATG+TGG + chr2_1:7260124-7260143 None:intergenic 35.0%
ATGAGAAGCGGTTACAAAAT+AGG + chr2_1:7260133-7260152 None:intergenic 35.0%
!!! ACAGTTCTGGTTTTTGAGTT+TGG + chr2_1:7260287-7260306 None:intergenic 35.0%
AATGTGTTGAATTATACGGG+TGG + chr2_1:7260457-7260476 None:intergenic 35.0%
TGTGGTTACTTGTATGTTTC+AGG - chr2_1:7260498-7260517 Msa0191640:intron 35.0%
ATCAAAGATTGAAGACCTTG+AGG - chr2_1:7260529-7260548 Msa0191640:intron 35.0%
TCAGTAGATTGTGAAACTTC+AGG + chr2_1:7260755-7260774 None:intergenic 35.0%
ACATTTACCTTCCCAGAAAT+TGG - chr2_1:7260871-7260890 Msa0191640:intron 35.0%
GAGAAGAACGAGAAAAAACA+TGG - chr2_1:7261094-7261113 Msa0191640:intron 35.0%
ACATTTACCATCCCAGAAAT+TGG - chr2_1:7261423-7261442 Msa0191640:intron 35.0%
TCAGTAGATTGTGAAACTTC+AGG + chr2_1:7260755-7260774 None:intergenic 35.0%
ACATTTACCATCCCAGAAAT+TGG - chr2_1:7261423-7261442 Msa0191640:intron 35.0%
TTCAACTCTCACCAATTTCT+GGG + chr2_1:7261713-7261732 None:intergenic 35.0%
ATTCAACTCTCACCAATTTC+TGG + chr2_1:7261714-7261733 None:intergenic 35.0%
TTCCTTTGATGTCTCTTTAG+CGG + chr2_1:7261740-7261759 None:intergenic 35.0%
TCAAAGGAAGGATTATCTGT+CGG - chr2_1:7261751-7261770 Msa0191640:intron 35.0%
AGTTTCACATTCTACTAAGC+AGG - chr2_1:7261861-7261880 Msa0191640:intron 35.0%
!!! AAGCAGGCTAAAGTTTTGAA+TGG - chr2_1:7261877-7261896 Msa0191640:intron 35.0%
AAGAGAAAAAGGAAGGATTG+TGG - chr2_1:7261961-7261980 Msa0191640:intron 35.0%
! TCCATAAAAGCTTTTGATGC+TGG - chr2_1:7262287-7262306 Msa0191640:intron 35.0%
AATATGAGGGTCCTTAAAAG+AGG - chr2_1:7262416-7262435 Msa0191640:intron 35.0%
TTATTTGATAGGACTTGAGG+TGG + chr2_1:7262521-7262540 None:intergenic 35.0%
! TGAAAAGGGTAACGGTTAAA+AGG + chr2_1:7262679-7262698 None:intergenic 35.0%
! TGTAACGGAATGTGTGAAAA+GGG + chr2_1:7262693-7262712 None:intergenic 35.0%
! TTGTAACGGAATGTGTGAAA+AGG + chr2_1:7262694-7262713 None:intergenic 35.0%
AATGGTTAGAAGTTACACCT+AGG + chr2_1:7262788-7262807 None:intergenic 35.0%
CCAATGTACAAATTCTCAGA+GGG + chr2_1:7262846-7262865 None:intergenic 35.0%
! CCTCTGAGAATTTGTACATT+GGG - chr2_1:7262844-7262863 Msa0191640:intron 35.0%
!!! CTCTAGCCCATTTTAGAATT+AGG + chr2_1:7262942-7262961 None:intergenic 35.0%
!! CTAATTCTAAAATGGGCTAG+AGG - chr2_1:7262940-7262959 Msa0191640:intron 35.0%
TAACTTTGTTCCTACCATGT+TGG - chr2_1:7263006-7263025 Msa0191640:intron 35.0%
TGTTATGTTACCAACATGGT+AGG + chr2_1:7263019-7263038 None:intergenic 35.0%
TGTCTGTTATGTTACCAACA+TGG + chr2_1:7263023-7263042 None:intergenic 35.0%
GTTGTTTAATTGTACCTGGT+TGG + chr2_1:7263142-7263161 None:intergenic 35.0%
TTTCTCGAAGAACTTACGTA+AGG - chr2_1:7263302-7263321 Msa0191640:intron 35.0%
TTCTCGAAGAACTTACGTAA+GGG - chr2_1:7263303-7263322 Msa0191640:intron 35.0%
! TGAGCTTAACTTAGTTGGTA+AGG - chr2_1:7263531-7263550 Msa0191640:intron 35.0%
CATAATATATGCAAGGTCTG+AGG - chr2_1:7263560-7263579 Msa0191640:intron 35.0%
TCAGTGAATATGGTTGTTTG+AGG + chr2_1:7263592-7263611 None:intergenic 35.0%
!! TTGGTAAATGGACTAATGGT+AGG + chr2_1:7263656-7263675 None:intergenic 35.0%
TTAATGGTGTGCTTGGTAAA+TGG + chr2_1:7263668-7263687 None:intergenic 35.0%
! CAATGAAGAGTATGCATACA+AGG - chr2_1:7263742-7263761 Msa0191640:intron 35.0%
! CCTCTTTTCTGTTGTCAAAT+AGG + chr2_1:7263799-7263818 None:intergenic 35.0%
CCTATTTGACAACAGAAAAG+AGG - chr2_1:7263796-7263815 Msa0191640:intron 35.0%
! CTCTGGTTGATTCAATTGTT+CGG + chr2_1:7263885-7263904 None:intergenic 35.0%
CATAGTCGCCAAAAAAATGA+GGG - chr2_1:7263999-7264018 Msa0191640:intron 35.0%
!!! GAAACTCTCCCTCATTTTTT+TGG + chr2_1:7264010-7264029 None:intergenic 35.0%
AAAAATGAGGGAGAGTTTCA+AGG - chr2_1:7264011-7264030 Msa0191640:intron 35.0%
AAAATGAGGGAGAGTTTCAA+GGG - chr2_1:7264012-7264031 Msa0191640:intron 35.0%
GGTAATTTCGTAGACTCATT+AGG + chr2_1:7264069-7264088 None:intergenic 35.0%
ACATGAAGATTATGATGCAC+TGG + chr2_1:7264090-7264109 None:intergenic 35.0%
AAAATCATTGCAAAGGCTGT+TGG - chr2_1:7264141-7264160 Msa0191640:CDS 35.0%
! TGTGAAGAATCGGCTTTAAT+GGG + chr2_1:7264204-7264223 None:intergenic 35.0%
! ATGTGAAGAATCGGCTTTAA+TGG + chr2_1:7264205-7264224 None:intergenic 35.0%
TTCCACAGAATGTGAAGAAT+CGG + chr2_1:7264214-7264233 None:intergenic 35.0%
!!! AGATTTTCTCCGTTTTGGTT+AGG - chr2_1:7264392-7264411 Msa0191640:intron 35.0%
!!! CGTTTTGGTTAGGTGTTTTT+TGG - chr2_1:7264402-7264421 Msa0191640:five_prime_UTR 35.0%
TTGGTGTAGTTTATTGAAGG+AGG - chr2_1:7264421-7264440 Msa0191640:five_prime_UTR 35.0%
TGTAGTTTATTGAAGGAGGA+AGG - chr2_1:7264425-7264444 Msa0191640:five_prime_UTR 35.0%
AATGAACTTGAGTTAGATGC+AGG - chr2_1:7264464-7264483 Msa0191640:five_prime_UTR 35.0%
!!! GGCAAGGTTTTTTTTAGCAA+TGG - chr2_1:7264625-7264644 Msa0191640:five_prime_UTR 35.0%
GGTGAGGGATTCTATTTGTA+AGG + chr2_1:7253257-7253276 None:intergenic 40.0%
ATAGAGTAAGCGTGAGAAGA+GGG + chr2_1:7253280-7253299 None:intergenic 40.0%
AATAGAGTAAGCGTGAGAAG+AGG + chr2_1:7253281-7253300 None:intergenic 40.0%
! TCGGGAATGGTAGTTTTTGT+TGG + chr2_1:7253404-7253423 None:intergenic 40.0%
! TATTTTCCGGCGAGAATTTC+GGG + chr2_1:7253422-7253441 None:intergenic 40.0%
! CTATTTTCCGGCGAGAATTT+CGG + chr2_1:7253423-7253442 None:intergenic 40.0%
! ACGTGGGTATGTCTATTTTC+CGG + chr2_1:7253435-7253454 None:intergenic 40.0%
AAAATAAGGCTTACCGGTGT+CGG + chr2_1:7253474-7253493 None:intergenic 40.0%
AAATCAACCACCATCTTCTC+CGG + chr2_1:7253520-7253539 None:intergenic 40.0%
TAGGACAATCAATGCGTTCT+CGG + chr2_1:7253745-7253764 None:intergenic 40.0%
ATAGTACCTCAGGGGTAAAA+GGG + chr2_1:7253769-7253788 None:intergenic 40.0%
AATAGTACCTCAGGGGTAAA+AGG + chr2_1:7253770-7253789 None:intergenic 40.0%
GATCCTTATATTGTGCCCTA+AGG - chr2_1:7254315-7254334 Msa0191640:intron 40.0%
! AATGCTAACTTGTGCCCTTA+GGG + chr2_1:7254333-7254352 None:intergenic 40.0%
! AAATGCTAACTTGTGCCCTT+AGG + chr2_1:7254334-7254353 None:intergenic 40.0%
ATTCGTCAAACGTGTGAATG+CGG + chr2_1:7254486-7254505 None:intergenic 40.0%
GTTTGACGAATCTAGATCGT+TGG - chr2_1:7254495-7254514 Msa0191640:intron 40.0%
! TACACAAACCTTTGAGAGCA+TGG - chr2_1:7254625-7254644 Msa0191640:intron 40.0%
ATAGGATTCCATGCTCTCAA+AGG + chr2_1:7254636-7254655 None:intergenic 40.0%
ACCAATTGAGTTAAGCTCAC+CGG + chr2_1:7255310-7255329 None:intergenic 40.0%
GTGAGCTTAACTCAATTGGT+TGG - chr2_1:7255310-7255329 Msa0191640:intron 40.0%
ATCAGTATCCGATACGTATC+CGG + chr2_1:7256636-7256655 None:intergenic 40.0%
TATCGGATACTGATACTCCA+CGG - chr2_1:7256642-7256661 Msa0191640:CDS 40.0%
GCAATGTTGTAAACATTCGG+TGG - chr2_1:7256827-7256846 Msa0191640:CDS 40.0%
ATAGCTATGAAGCCCAGATA+CGG + chr2_1:7257139-7257158 None:intergenic 40.0%
!!! ACCGAAGACCTTTTTTGGTT+TGG + chr2_1:7257611-7257630 None:intergenic 40.0%
!!! CTTGTACCGAAGACCTTTTT+TGG + chr2_1:7257616-7257635 None:intergenic 40.0%
AAAAGGTCTTCGGTACAAGT+TGG - chr2_1:7257617-7257636 Msa0191640:intron 40.0%
AAAGGTCTTCGGTACAAGTT+GGG - chr2_1:7257618-7257637 Msa0191640:intron 40.0%
ACTAATGGTTAGGAAGTTGG+AGG + chr2_1:7258229-7258248 None:intergenic 40.0%
TGCGAAGAAGTGGAAAATCT+AGG - chr2_1:7258586-7258605 Msa0191640:intron 40.0%
GCGAAGAAGTGGAAAATCTA+GGG - chr2_1:7258587-7258606 Msa0191640:intron 40.0%
AGATCCATGGACGTTGATAT+GGG + chr2_1:7258627-7258646 None:intergenic 40.0%
AAGATCCATGGACGTTGATA+TGG + chr2_1:7258628-7258647 None:intergenic 40.0%
TACGTCCTGTAATTGCAACT+CGG + chr2_1:7258656-7258675 None:intergenic 40.0%
!!! ATTTTAGAGCGACGATTCAG+TGG - chr2_1:7258785-7258804 Msa0191640:intron 40.0%
TGTGAATAACAATTGCCAGG+TGG + chr2_1:7258843-7258862 None:intergenic 40.0%
! ACCTGGCAATTGTTATTCAC+AGG - chr2_1:7258842-7258861 Msa0191640:intron 40.0%
ACCTGTGAATAACAATTGCC+AGG + chr2_1:7258846-7258865 None:intergenic 40.0%
AAGACATGATCACTTGCACA+TGG - chr2_1:7258904-7258923 Msa0191640:intron 40.0%
TCACTTGCACATGGTCAATT+AGG - chr2_1:7258913-7258932 Msa0191640:intron 40.0%
TGGTAATCAGAAATGGCACA+TGG - chr2_1:7259005-7259024 Msa0191640:intron 40.0%
!!! TTGTTTCCTAGTTTTGGCGT+AGG - chr2_1:7259255-7259274 Msa0191640:intron 40.0%
TCATATCCTACGCCAAAACT+AGG + chr2_1:7259264-7259283 None:intergenic 40.0%
GATTTGCAACAACGGTATTC+TGG - chr2_1:7259416-7259435 Msa0191640:intron 40.0%
!!! ATTTTTAGCCACTAGGCTAC+TGG + chr2_1:7259532-7259551 None:intergenic 40.0%
CAATTATTCACCTCAAAGGG+TGG + chr2_1:7259555-7259574 None:intergenic 40.0%
!! CACCCTTTGAGGTGAATAAT+TGG - chr2_1:7259553-7259572 Msa0191640:intron 40.0%
CCCCAATTATTCACCTCAAA+GGG + chr2_1:7259558-7259577 None:intergenic 40.0%
!! CCCTTTGAGGTGAATAATTG+GGG - chr2_1:7259555-7259574 Msa0191640:intron 40.0%
TCCCCAATTATTCACCTCAA+AGG + chr2_1:7259559-7259578 None:intergenic 40.0%
GTGAATAATTGGGGAATCTG+AGG - chr2_1:7259564-7259583 Msa0191640:intron 40.0%
TAGAAACTTGCGATATGCAG+GGG + chr2_1:7259601-7259620 None:intergenic 40.0%
GTAGAAACTTGCGATATGCA+GGG + chr2_1:7259602-7259621 None:intergenic 40.0%
CTCTATGAGCATAGCTCAAT+TGG + chr2_1:7259624-7259643 None:intergenic 40.0%
GATGGTAAAATTGCAATGCC+AGG - chr2_1:7259741-7259760 Msa0191640:intron 40.0%
!!! TGCCAGGGATTTTTTGTATG+AGG - chr2_1:7259757-7259776 Msa0191640:intron 40.0%
CTCCTCATACAAAAAATCCC+TGG + chr2_1:7259762-7259781 None:intergenic 40.0%
! GCGATCCAATGAGTTTTCAT+TGG + chr2_1:7260102-7260121 None:intergenic 40.0%
! TGGTTTAGAGTTCACAGTTC+TGG + chr2_1:7260300-7260319 None:intergenic 40.0%
TGCACACTACACACTGTAAA+AGG + chr2_1:7260335-7260354 None:intergenic 40.0%
ATCTTGTGTCCGTTTCATCA+CGG - chr2_1:7260365-7260384 Msa0191640:intron 40.0%
CTTATCCTACCGTGATGAAA+CGG + chr2_1:7260377-7260396 None:intergenic 40.0%
TGTGAAGGTAAATGTGATGC+TGG + chr2_1:7260602-7260621 None:intergenic 40.0%
ACTCTCTCCAATTTCTGTGA+AGG + chr2_1:7260617-7260636 None:intergenic 40.0%
GAGAGTTAAATCTTCCACCA+AGG - chr2_1:7260631-7260650 Msa0191640:intron 40.0%
GTTAAATCTTCCACCAAGGA+AGG - chr2_1:7260635-7260654 Msa0191640:intron 40.0%
CGTTTCATGAGTGAAACTTC+CGG + chr2_1:7260669-7260688 None:intergenic 40.0%
GAAGTTTCACTCATGAAACG+AGG - chr2_1:7260669-7260688 Msa0191640:intron 40.0%
AGGCTTAGTCTCGTTATCAT+CGG + chr2_1:7260735-7260754 None:intergenic 40.0%
AGTTTCACAATCTACTGAGC+AGG - chr2_1:7260757-7260776 Msa0191640:intron 40.0%
ATCAAAGCTTGAAGTCCTCA+AGG - chr2_1:7260793-7260812 Msa0191640:intron 40.0%
TATCCTTCTTCTCAACCTTG+AGG + chr2_1:7260811-7260830 None:intergenic 40.0%
TGGGAAGGTAAATGTGATAC+GGG + chr2_1:7260866-7260885 None:intergenic 40.0%
CTGGGAAGGTAAATGTGATA+CGG + chr2_1:7260867-7260886 None:intergenic 40.0%
GAGAGTTAAATCTTCCACCA+AGG - chr2_1:7260631-7260650 Msa0191640:intron 40.0%
CATTTCGTGAGTGAAACTTC+CGG + chr2_1:7260945-7260964 None:intergenic 40.0%
GAAGTTTCACTCACGAAATG+AGG - chr2_1:7260945-7260964 Msa0191640:intron 40.0%
GTTTCGTTATTATCGGCAGA+TGG + chr2_1:7261004-7261023 None:intergenic 40.0%
! AGTTTTGCAATCTACTGAGC+AGG - chr2_1:7261033-7261052 Msa0191640:intron 40.0%
! TGCGAAGGTACATGTGATAT+GGG + chr2_1:7261142-7261161 None:intergenic 40.0%
ACATGTACCTTCGCAGAAAT+TGG - chr2_1:7261147-7261166 Msa0191640:intron 40.0%
! CGTTTTGTGAGTGAAACTTC+CGG + chr2_1:7261221-7261240 None:intergenic 40.0%
GAAGTTTCACTCACAAAACG+AGG - chr2_1:7261221-7261240 Msa0191640:intron 40.0%
AGGCTTAGTCTCGTTATCAT+CGG + chr2_1:7260735-7260754 None:intergenic 40.0%
TCGGTAGATTGCAAAACTTC+AGG + chr2_1:7261307-7261326 None:intergenic 40.0%
ATCAAAGCTTGAAGTCCTCA+AGG - chr2_1:7260793-7260812 Msa0191640:intron 40.0%
TGGGATGGTAAATGTGATAC+TGG + chr2_1:7261418-7261437 None:intergenic 40.0%
TGTTTCGTGTGTGAAACTTC+CGG + chr2_1:7261497-7261516 None:intergenic 40.0%
GAAGTTTCACACACGAAACA+AGG - chr2_1:7261497-7261516 Msa0191640:intron 40.0%
AGGCTTAGTCTCGTTATCAT+CGG + chr2_1:7260735-7260754 None:intergenic 40.0%
AGTTTCACAATCTACTGAGC+AGG - chr2_1:7260757-7260776 Msa0191640:intron 40.0%
ACCAAAGCTTGAATTCCTCA+TGG - chr2_1:7261621-7261640 Msa0191640:intron 40.0%
TCCATGAGGAATTCAAGCTT+TGG + chr2_1:7261625-7261644 None:intergenic 40.0%
TCTCATTCTTCTCATCCATG+AGG + chr2_1:7261639-7261658 None:intergenic 40.0%
TGGGATGGTAAATGTGATAC+TGG + chr2_1:7261418-7261437 None:intergenic 40.0%
TTCCGCTAAAGAGACATCAA+AGG - chr2_1:7261735-7261754 Msa0191640:intron 40.0%
GCTAAAGAGACATCAAAGGA+AGG - chr2_1:7261739-7261758 Msa0191640:intron 40.0%
CAAAGGAAGGATTATCTGTC+GGG - chr2_1:7261752-7261771 Msa0191640:intron 40.0%
GATGTCGTAAAAAACGGAGA+GGG - chr2_1:7261938-7261957 Msa0191640:intron 40.0%
ATTCAGCTGATGTTATGTCC+TGG - chr2_1:7262031-7262050 Msa0191640:intron 40.0%
AGTAGAACTTTCTTTACGCC+AGG + chr2_1:7262052-7262071 None:intergenic 40.0%
GTCTACATGAGCAGAAGATT+TGG + chr2_1:7262094-7262113 None:intergenic 40.0%
! GAACCTGAAAAAGCATAGCA+CGG - chr2_1:7262128-7262147 Msa0191640:intron 40.0%
! GCCAGCATCAAAAGCTTTTA+TGG + chr2_1:7262291-7262310 None:intergenic 40.0%
AACGGTTAAAAGGACCTATG+TGG + chr2_1:7262669-7262688 None:intergenic 40.0%
GGAATGTGTGAAAAGGGTAA+CGG + chr2_1:7262687-7262706 None:intergenic 40.0%
! CCCTCTGAGAATTTGTACAT+TGG - chr2_1:7262843-7262862 Msa0191640:intron 40.0%
CCCAATGTACAAATTCTCAG+AGG + chr2_1:7262847-7262866 None:intergenic 40.0%
CTGAGAATTTGTACATTGGG+AGG - chr2_1:7262847-7262866 Msa0191640:intron 40.0%
GTACCCATAGAAGATGGAAA+TGG - chr2_1:7262962-7262981 Msa0191640:intron 40.0%
ACGCCATTTCCATCTTCTAT+GGG + chr2_1:7262968-7262987 None:intergenic 40.0%
AAAACCTTAAAGACCCAACC+AGG - chr2_1:7263125-7263144 Msa0191640:intron 40.0%
TGTGGATCATATGGAGAAGT+GGG + chr2_1:7263351-7263370 None:intergenic 40.0%
TTGTGGATCATATGGAGAAG+TGG + chr2_1:7263352-7263371 None:intergenic 40.0%
ACTAGTGGTTGTGGATCATA+TGG + chr2_1:7263360-7263379 None:intergenic 40.0%
CACAACCACTAGTAGACTAA+CGG - chr2_1:7263367-7263386 Msa0191640:intron 40.0%
! ATTTGCCGTTAGTCTACTAG+TGG + chr2_1:7263375-7263394 None:intergenic 40.0%
CCAACTAAGTTAAGCTCACA+AGG + chr2_1:7263529-7263548 None:intergenic 40.0%
CCTTGTGAGCTTAACTTAGT+TGG - chr2_1:7263526-7263545 Msa0191640:intron 40.0%
!! GTGCTTGGTAAATGGACTAA+TGG + chr2_1:7263660-7263679 None:intergenic 40.0%
ACATGGACTTCGACACTATA+AGG - chr2_1:7263845-7263864 Msa0191640:intron 40.0%
GATCTTCGAGTAGAAGACTA+GGG + chr2_1:7263944-7263963 None:intergenic 40.0%
TGATCTTCGAGTAGAAGACT+AGG + chr2_1:7263945-7263964 None:intergenic 40.0%
AAAACTGCTCTCCTTCTAAG+AGG - chr2_1:7263976-7263995 Msa0191640:intron 40.0%
GCATAGTCGCCAAAAAAATG+AGG - chr2_1:7263998-7264017 Msa0191640:intron 40.0%
! AAACCAAGAAGTGTAAGACC+AGG - chr2_1:7264111-7264130 Msa0191640:CDS 40.0%
! GCAATGATTTTTCTGTTGCC+TGG + chr2_1:7264132-7264151 None:intergenic 40.0%
!!! GTCTTTTGACTTGAAGTCAC+AGG + chr2_1:7264285-7264304 None:intergenic 40.0%
! ACTCTTTTCCTTCCTTTCAC+TGG + chr2_1:7264315-7264334 None:intergenic 40.0%
AACTTGAGTTAGATGCAGGA+GGG - chr2_1:7264468-7264487 Msa0191640:five_prime_UTR 40.0%
TAGAGTAAGCGTGAGAAGAG+GGG + chr2_1:7253279-7253298 None:intergenic 45.0%
! AAAACCGGTTTCTCTGACGT+GGG + chr2_1:7253451-7253470 None:intergenic 45.0%
! TTTCTGTCTTTTCCGGTGAC+CGG - chr2_1:7253498-7253517 Msa0191640:three_prime_UTR 45.0%
AATAATCAGGGACGTACACG+TGG - chr2_1:7253621-7253640 Msa0191640:CDS 45.0%
TGCCCTTAGGGCACAATATA+AGG + chr2_1:7254321-7254340 None:intergenic 45.0%
TCCGGTGAGCTTAACTCAAT+TGG - chr2_1:7255306-7255325 Msa0191640:intron 45.0%
TTAATCTGCCCGCAAAGTCT+CGG - chr2_1:7255692-7255711 Msa0191640:CDS 45.0%
CTCGGACATCATTAGGGTTA+CGG + chr2_1:7256457-7256476 None:intergenic 45.0%
CAGTTGCTCGGACATCATTA+GGG + chr2_1:7256463-7256482 None:intergenic 45.0%
TCAGTTGCTCGGACATCATT+AGG + chr2_1:7256464-7256483 None:intergenic 45.0%
!!! GTCTCCATTTTGGAGTATCC+GGG + chr2_1:7256604-7256623 None:intergenic 45.0%
!!! CGTCTCCATTTTGGAGTATC+CGG + chr2_1:7256605-7256624 None:intergenic 45.0%
TATCCGATACGTATCCGGTA+CGG + chr2_1:7256631-7256650 None:intergenic 45.0%
TGATACTCCACGGATACTTG+CGG - chr2_1:7256652-7256671 Msa0191640:CDS 45.0%
ATACCGGTACGATACGATAC+GGG + chr2_1:7257116-7257135 None:intergenic 45.0%
GATACCGGTACGATACGATA+CGG + chr2_1:7257117-7257136 None:intergenic 45.0%
!! ACTAGACCCTTTTGGTGTGT+AGG + chr2_1:7258368-7258387 None:intergenic 45.0%
! GCATCTTCACTAGACCCTTT+TGG + chr2_1:7258376-7258395 None:intergenic 45.0%
CATTGGACGCACGTGTAAAT+TGG + chr2_1:7258413-7258432 None:intergenic 45.0%
GCACTATAAGTGCGAAGAAG+TGG - chr2_1:7258576-7258595 Msa0191640:intron 45.0%
TGGACGTTGATATGGGGATT+GGG + chr2_1:7258620-7258639 None:intergenic 45.0%
ATGGACGTTGATATGGGGAT+TGG + chr2_1:7258621-7258640 None:intergenic 45.0%
AATCCCCATATCAACGTCCA+TGG - chr2_1:7258620-7258639 Msa0191640:intron 45.0%
GATCCATGGACGTTGATATG+GGG + chr2_1:7258626-7258645 None:intergenic 45.0%
!! AACTCGGTTGGTAAGATCCA+TGG + chr2_1:7258640-7258659 None:intergenic 45.0%
ACCAACCGAGTTGCAATTAC+AGG - chr2_1:7258648-7258667 Msa0191640:intron 45.0%
TCCTGTAATTGCAACTCGGT+TGG + chr2_1:7258652-7258671 None:intergenic 45.0%
CTTGCACATGGTCAATTAGG+TGG - chr2_1:7258916-7258935 Msa0191640:intron 45.0%
!!! AGGGTGGATTTTTAGCCACT+AGG + chr2_1:7259539-7259558 None:intergenic 45.0%
GGCTAAAAATCCACCCTTTG+AGG - chr2_1:7259542-7259561 Msa0191640:intron 45.0%
GGTAGAAACTTGCGATATGC+AGG + chr2_1:7259603-7259622 None:intergenic 45.0%
AAGAAAGCTATTGAGCGCTC+TGG - chr2_1:7259809-7259828 Msa0191640:intron 45.0%
!! AGCGCTCTGGAGATTCAATT+GGG - chr2_1:7259822-7259841 Msa0191640:intron 45.0%
AGTGTGTAGTGTGCACTGTA+AGG - chr2_1:7260340-7260359 Msa0191640:intron 45.0%
CTCATGAAACGAGGACAAAC+TGG - chr2_1:7260678-7260697 Msa0191640:intron 45.0%
! AAACTGGTTTCCTGAATCCC+AGG - chr2_1:7260694-7260713 Msa0191640:intron 45.0%
AGTCCTCAAGGTTGAGAAGA+AGG - chr2_1:7260805-7260824 Msa0191640:intron 45.0%
! ACTCTCTCCAATTTCTGGGA+AGG + chr2_1:7260881-7260900 None:intergenic 45.0%
TTCCACCAAGGAAACATCGA+AGG - chr2_1:7260907-7260926 Msa0191640:intron 45.0%
ATCCTTCGATGTTTCCTTGG+TGG + chr2_1:7260912-7260931 None:intergenic 45.0%
ACCAAGGAAACATCGAAGGA+TGG - chr2_1:7260911-7260930 Msa0191640:intron 45.0%
CTCACGAAATGAGGACAAAC+TGG - chr2_1:7260954-7260973 Msa0191640:intron 45.0%
TCTCGTTCTTCTCAGCTTTG+AGG + chr2_1:7261087-7261106 None:intergenic 45.0%
! CTGCGAAGGTACATGTGATA+TGG + chr2_1:7261143-7261162 None:intergenic 45.0%
ACTCTCTCCAATTTCTGCGA+AGG + chr2_1:7261157-7261176 None:intergenic 45.0%
CTCACAAAACGAGGACAAAC+TGG - chr2_1:7261230-7261249 Msa0191640:intron 45.0%
! AGTTTTGCAATCTACCGAGC+AGG - chr2_1:7261309-7261328 Msa0191640:intron 45.0%
TTGCGAAACTTTAGCCTGCT+CGG + chr2_1:7261326-7261345 None:intergenic 45.0%
! ACTCTCTCCAATTTCTGGGA+TGG + chr2_1:7260881-7260900 None:intergenic 45.0%
CACACGAAACAAGGACAAAC+TGG - chr2_1:7261506-7261525 Msa0191640:intron 45.0%
! ACTCTCACCAATTTCTGGGA+TGG + chr2_1:7261709-7261728 None:intergenic 45.0%
GGAGTTTCACACACGAAACA+AGG - chr2_1:7261773-7261792 Msa0191640:intron 45.0%
CACACGAAACAAGGACAAAC+TGG - chr2_1:7261506-7261525 Msa0191640:intron 45.0%
TTATCATCGGAAGATGCAGC+TGG + chr2_1:7261826-7261845 None:intergenic 45.0%
GGATGTCGTAAAAAACGGAG+AGG - chr2_1:7261937-7261956 Msa0191640:intron 45.0%
AACGGAGAGGGAAGAGAAAA+AGG - chr2_1:7261950-7261969 Msa0191640:intron 45.0%
GAGAGGGAAGAGAAAAAGGA+AGG - chr2_1:7261954-7261973 Msa0191640:intron 45.0%
!!! CTTCCGTGCTATGCTTTTTC+AGG + chr2_1:7262134-7262153 None:intergenic 45.0%
!! TCTCTAGGGAGTGCTTGTTA+TGG - chr2_1:7262389-7262408 Msa0191640:intron 45.0%
! AGGGTCCTTAAAAGAGGTGT+AGG - chr2_1:7262422-7262441 Msa0191640:intron 45.0%
! GTCCTTAAAAGAGGTGTAGG+CGG - chr2_1:7262425-7262444 Msa0191640:intron 45.0%
! ATCCGCCTACACCTCTTTTA+AGG + chr2_1:7262430-7262449 None:intergenic 45.0%
GTACCTCTTTCTCATCTCCT+AGG - chr2_1:7262768-7262787 Msa0191640:intron 45.0%
ACACCTAGGAGATGAGAAAG+AGG + chr2_1:7262774-7262793 None:intergenic 45.0%
ATTGGGAGGTGAATACCTCT+GGG - chr2_1:7262861-7262880 Msa0191640:intron 45.0%
AATTGATTGTGTAGCCCCAG+AGG + chr2_1:7262879-7262898 None:intergenic 45.0%
!! CTAGAGGTACCCATAGAAGA+TGG - chr2_1:7262956-7262975 Msa0191640:intron 45.0%
CACGCCATTTCCATCTTCTA+TGG + chr2_1:7262969-7262988 None:intergenic 45.0%
ATGGAAATGGCGTGCACATA+CGG - chr2_1:7262975-7262994 Msa0191640:intron 45.0%
TGTACCTGGTTGGGTCTTTA+AGG + chr2_1:7263132-7263151 None:intergenic 45.0%
CGAAGAACTTACGTAAGGGT+CGG - chr2_1:7263307-7263326 Msa0191640:intron 45.0%
GAAGAACTTACGTAAGGGTC+GGG - chr2_1:7263308-7263327 Msa0191640:intron 45.0%
AAGAACTTACGTAAGGGTCG+GGG - chr2_1:7263309-7263328 Msa0191640:intron 45.0%
! CGTTAGTCTACTAGTGGTTG+TGG + chr2_1:7263369-7263388 None:intergenic 45.0%
TGGCAACTTAATGGTGTGCT+TGG + chr2_1:7263675-7263694 None:intergenic 45.0%
GAAAATGATCCAGCAGCACA+TGG - chr2_1:7263828-7263847 Msa0191640:intron 45.0%
CAAGTCTCGGTATAGTTCTC+TGG + chr2_1:7263902-7263921 None:intergenic 45.0%
!! GTAGAAGACTAGGGCATTGT+TGG + chr2_1:7263935-7263954 None:intergenic 45.0%
!! TTGCCTGGTCTTACACTTCT+TGG + chr2_1:7264117-7264136 None:intergenic 45.0%
ATCATTGCAAAGGCTGTTGG+TGG - chr2_1:7264144-7264163 Msa0191640:CDS 45.0%
GACAACTCTGCATCTTCACA+AGG - chr2_1:7264168-7264187 Msa0191640:CDS 45.0%
! AGCCGATTCTTCACATTCTG+TGG - chr2_1:7264209-7264228 Msa0191640:CDS 45.0%
AAGACTGCAACACCAGTGAA+AGG - chr2_1:7264300-7264319 Msa0191640:intron 45.0%
GAACTTGAGTTAGATGCAGG+AGG - chr2_1:7264467-7264486 Msa0191640:five_prime_UTR 45.0%
!!! TTTTTTTATATTTATATTGA+AGG + chr2_1:7255854-7255873 None:intergenic 5.0%
!!! ATTTTATTTATTGAAAATAT+TGG - chr2_1:7256140-7256159 Msa0191640:CDS 5.0%
!!! ATATTTTAAATTATTTTTGT+AGG + chr2_1:7257435-7257454 None:intergenic 5.0%
!! TAATAATAATATAATAATAG+AGG + chr2_1:7258746-7258765 None:intergenic 5.0%
AGAGTAAGCGTGAGAAGAGG+GGG + chr2_1:7253278-7253297 None:intergenic 50.0%
ACCATTCCCGAAATTCTCGC+CGG - chr2_1:7253413-7253432 Msa0191640:three_prime_UTR 50.0%
CATACCCACGTCAGAGAAAC+CGG - chr2_1:7253444-7253463 Msa0191640:three_prime_UTR 50.0%
! GAAAACCGGTTTCTCTGACG+TGG + chr2_1:7253452-7253471 None:intergenic 50.0%
!! AGAAACCGGTTTTCCGACAC+CGG - chr2_1:7253458-7253477 Msa0191640:three_prime_UTR 50.0%
AATGCGTTCTCGGAGTTCAC+CGG + chr2_1:7253735-7253754 None:intergenic 50.0%
! TCCTATCCCTTTTACCCCTG+AGG - chr2_1:7253760-7253779 Msa0191640:CDS 50.0%
ACCTCAGGGGTAAAAGGGAT+AGG + chr2_1:7253764-7253783 None:intergenic 50.0%
TTTGGTCGTTGGATCAGGCT+CGG + chr2_1:7254586-7254605 None:intergenic 50.0%
AGAAGCTTCCGAGACTTTGC+GGG + chr2_1:7255703-7255722 None:intergenic 50.0%
CAGAAGCTTCCGAGACTTTG+CGG + chr2_1:7255704-7255723 None:intergenic 50.0%
GAAGCCCGGATACTCCAAAA+TGG - chr2_1:7256597-7256616 Msa0191640:CDS 50.0%
! GTACGGGTACGTCTCCATTT+TGG + chr2_1:7256614-7256633 None:intergenic 50.0%
AAATGGAGACGTACCCGTAC+CGG - chr2_1:7256614-7256633 Msa0191640:CDS 50.0%
TACCCGTACCGGATACGTAT+CGG - chr2_1:7256625-7256644 Msa0191640:CDS 50.0%
ATCCGATACGTATCCGGTAC+GGG + chr2_1:7256630-7256649 None:intergenic 50.0%
CGATACTCCGCAGATACACA+AGG - chr2_1:7256743-7256762 Msa0191640:CDS 50.0%
GTACCCGTATCGTATCGTAC+CGG - chr2_1:7257110-7257129 Msa0191640:CDS 50.0%
! ATCGTACCGGTATCCGTATC+TGG - chr2_1:7257123-7257142 Msa0191640:CDS 50.0%
! TCGTACCGGTATCCGTATCT+GGG - chr2_1:7257124-7257143 Msa0191640:CDS 50.0%
TGAAGCCCAGATACGGATAC+CGG + chr2_1:7257132-7257151 None:intergenic 50.0%
! TTCGGTACAAGTTGGGCCTT+AGG - chr2_1:7257625-7257644 Msa0191640:intron 50.0%
CAAGGTGACGTGTCCAATGA+TGG + chr2_1:7258441-7258460 None:intergenic 50.0%
GGACGTTGATATGGGGATTG+GGG + chr2_1:7258619-7258638 None:intergenic 50.0%
CACTAATGTTGGCATCCACC+TGG - chr2_1:7258825-7258844 Msa0191640:intron 50.0%
!! GAGCGCTCTGGAGATTCAAT+TGG - chr2_1:7259821-7259840 Msa0191640:intron 50.0%
TGTGTCCGTTTCATCACGGT+AGG - chr2_1:7260369-7260388 Msa0191640:intron 50.0%
CCTCATTCTTCTCAGCCTCA+AGG + chr2_1:7260547-7260566 None:intergenic 50.0%
CCTTGAGGCTGAGAAGAATG+AGG - chr2_1:7260544-7260563 Msa0191640:intron 50.0%
GAGTGAAACTTCCGGCAGAT+AGG + chr2_1:7260661-7260680 None:intergenic 50.0%
GCCATCCTTCGATGTTTCCT+TGG + chr2_1:7260915-7260934 None:intergenic 50.0%
GAGTGAAACTTCCGGCAGAT+AGG + chr2_1:7260661-7260680 None:intergenic 50.0%
! AAACTGGTCTCCTGAATCCC+AGG - chr2_1:7260970-7260989 Msa0191640:intron 50.0%
TCAAAGGATGGCCTATCTGC+CGG - chr2_1:7261199-7261218 Msa0191640:intron 50.0%
GAGTGAAACTTCCGGCAGAT+AGG + chr2_1:7260661-7260680 None:intergenic 50.0%
TCAAAGGATGGCCTATCTGC+CGG - chr2_1:7261199-7261218 Msa0191640:intron 50.0%
GTGTGAAACTTCCGGCAGAT+AGG + chr2_1:7261489-7261508 None:intergenic 50.0%
! AAACTGGTCTCCTGAATCCC+AGG - chr2_1:7260970-7260989 Msa0191640:intron 50.0%
! AAACTGGTCTCCTGAATCCC+AGG - chr2_1:7260970-7260989 Msa0191640:intron 50.0%
ACCATCAAGTCTTCGACGGA+AGG + chr2_1:7262205-7262224 None:intergenic 50.0%
CCTGACCATCAAGTCTTCGA+CGG + chr2_1:7262209-7262228 None:intergenic 50.0%
CATTGGGAGGTGAATACCTC+TGG - chr2_1:7262860-7262879 Msa0191640:intron 50.0%
TTGGGAGGTGAATACCTCTG+GGG - chr2_1:7262862-7262881 Msa0191640:intron 50.0%
TGGTGAGTAGCAGCAAGTCT+CGG + chr2_1:7263915-7263934 None:intergenic 50.0%
TGGCGACTATGCCTCTTAGA+AGG + chr2_1:7263990-7264009 None:intergenic 50.0%
CTGCAACACCAGTGAAAGGA+AGG - chr2_1:7264304-7264323 Msa0191640:intron 50.0%
TCCGGCGAGAATTTCGGGAA+TGG + chr2_1:7253417-7253436 None:intergenic 55.0%
! GCTTACCGGTGTCGGAAAAC+CGG + chr2_1:7253466-7253485 None:intergenic 55.0%
TTTCCGGTGACCGGAGAAGA+TGG - chr2_1:7253507-7253526 Msa0191640:three_prime_UTR 55.0%
ATCAGGGACGTACACGTGGA+CGG - chr2_1:7253625-7253644 Msa0191640:CDS 55.0%
ACGTACACGTGGACGGTGAT+GGG - chr2_1:7253632-7253651 Msa0191640:CDS 55.0%
!! GTGGACGGTGATGGGTAGAT+GGG - chr2_1:7253640-7253659 Msa0191640:CDS 55.0%
!! TGGACGGTGATGGGTAGATG+GGG - chr2_1:7253641-7253660 Msa0191640:CDS 55.0%
! TGATGGGTAGATGGGGGACA+TGG - chr2_1:7253648-7253667 Msa0191640:CDS 55.0%
GATGGGTAGATGGGGGACAT+GGG - chr2_1:7253649-7253668 Msa0191640:CDS 55.0%
GTCCGAGCAACTGAGCTAAG+CGG - chr2_1:7256470-7256489 Msa0191640:CDS 55.0%
TCCGAGCAACTGAGCTAAGC+GGG - chr2_1:7256471-7256490 Msa0191640:CDS 55.0%
TCCCGCTTAGCTCAGTTGCT+CGG + chr2_1:7256475-7256494 None:intergenic 55.0%
TGCGTATCCGCAAGTATCCG+TGG + chr2_1:7256662-7256681 None:intergenic 55.0%
ACCAAGGAAGGCCTATCTGC+CGG - chr2_1:7260647-7260666 Msa0191640:intron 55.0%
TTATCATCGGCAGACGCAGC+TGG + chr2_1:7260722-7260741 None:intergenic 55.0%
TCGAAGGATGGCCTATCTGC+CGG - chr2_1:7260923-7260942 Msa0191640:intron 55.0%
! GGCGTTGAAACCTGGGATTC+AGG + chr2_1:7260983-7261002 None:intergenic 55.0%
! GGCAGATGGCGTTGAAACCT+GGG + chr2_1:7260990-7261009 None:intergenic 55.0%
! ACGAGGACAAACTGGTCTCC+TGG - chr2_1:7261238-7261257 Msa0191640:intron 55.0%
! AAACTGGTCTCCTGGATCCC+AGG - chr2_1:7261246-7261265 Msa0191640:intron 55.0%
TTATCATCGGCAGATGCCGC+TGG + chr2_1:7261274-7261293 None:intergenic 55.0%
TCTCATTCTGCTCGGCCTTG+AGG + chr2_1:7261363-7261382 None:intergenic 55.0%
TTATCATCGGCAGACGCAGC+TGG + chr2_1:7260722-7260741 None:intergenic 55.0%
GGAAGATGCAGCTGGAACCT+GGG + chr2_1:7261818-7261837 None:intergenic 55.0%
GCCTTCCGTCGAAGACTTGA+TGG - chr2_1:7262201-7262220 Msa0191640:intron 55.0%
! CCGTCGAAGACTTGATGGTC+AGG - chr2_1:7262206-7262225 Msa0191640:intron 55.0%
TGGCGTGCACATACGGTAAG+TGG - chr2_1:7262982-7263001 Msa0191640:intron 55.0%
TGTCGAAGTCCATGTGCTGC+TGG + chr2_1:7263840-7263859 None:intergenic 55.0%
AGCGTGAGAAGAGGGGGTGA+GGG + chr2_1:7253272-7253291 None:intergenic 60.0%
AAGCGTGAGAAGAGGGGGTG+AGG + chr2_1:7253273-7253292 None:intergenic 60.0%
CCACCATCTTCTCCGGTCAC+CGG + chr2_1:7253513-7253532 None:intergenic 60.0%
GACGTACACGTGGACGGTGA+TGG - chr2_1:7253631-7253650 Msa0191640:CDS 60.0%
!! CGTGGACGGTGATGGGTAGA+TGG - chr2_1:7253639-7253658 Msa0191640:CDS 60.0%
!! GGACGGTGATGGGTAGATGG+GGG - chr2_1:7253642-7253661 Msa0191640:CDS 60.0%
ACATGGGAGGAGCTCCTCCT+TGG - chr2_1:7253665-7253684 Msa0191640:CDS 60.0%
! TCCTTGGTGGGGCGGTTTTC+CGG - chr2_1:7253681-7253700 Msa0191640:CDS 60.0%
TCCAGTCTCGTGTCCCGTAC+CGG + chr2_1:7253703-7253722 None:intergenic 60.0%
GGCAGATAGGCCTTCCTTGG+TGG + chr2_1:7260648-7260667 None:intergenic 60.0%
TCCGGCAGATAGGCCTTCCT+TGG + chr2_1:7260651-7260670 None:intergenic 60.0%
GCAGCTGGAACCTGGGATTC+AGG + chr2_1:7260707-7260726 None:intergenic 60.0%
! CGGCAGATGGCGTTGAAACC+TGG + chr2_1:7260991-7261010 None:intergenic 60.0%
TCCTGGATCCCAGGTTCCAG+CGG - chr2_1:7261255-7261274 Msa0191640:intron 60.0%
GCAGCTGGAACCTGGGATTC+AGG + chr2_1:7260707-7260726 None:intergenic 60.0%
GCAGCTGGAACCTGGGATTC+AGG + chr2_1:7260707-7260726 None:intergenic 60.0%
CGGAAGATGCAGCTGGAACC+TGG + chr2_1:7261819-7261838 None:intergenic 60.0%
CCGGTGACCGGAGAAGATGG+TGG - chr2_1:7253510-7253529 Msa0191640:three_prime_UTR 65.0%
GGGTAGATGGGGGACATGGG+AGG - chr2_1:7253652-7253671 Msa0191640:CDS 65.0%
TGGGAGGAGCTCCTCCTTGG+TGG - chr2_1:7253668-7253687 Msa0191640:CDS 65.0%
GGGAGGAGCTCCTCCTTGGT+GGG - chr2_1:7253669-7253688 Msa0191640:CDS 65.0%
GGAGGAGCTCCTCCTTGGTG+GGG - chr2_1:7253670-7253689 Msa0191640:CDS 65.0%
GGAAAACCGCCCCACCAAGG+AGG + chr2_1:7253682-7253701 None:intergenic 65.0%
ACCGGAAAACCGCCCCACCA+AGG + chr2_1:7253685-7253704 None:intergenic 65.0%
! GGTGGGGCGGTTTTCCGGTA+CGG - chr2_1:7253686-7253705 Msa0191640:CDS 65.0%
! GTGGGGCGGTTTTCCGGTAC+GGG - chr2_1:7253687-7253706 Msa0191640:CDS 65.0%
TCCGGTACGGGACACGAGAC+TGG - chr2_1:7253699-7253718 Msa0191640:CDS 65.0%
CGAGACTGGAACGTCGTCGC+CGG - chr2_1:7253713-7253732 Msa0191640:CDS 65.0%
GGCAGACGCAGCTGGAACCT+GGG + chr2_1:7260714-7260733 None:intergenic 65.0%
GGCAGATGCCGCTGGAACCT+GGG + chr2_1:7261266-7261285 None:intergenic 65.0%
GGCAGACGCAGCTGGAACCT+GGG + chr2_1:7260714-7260733 None:intergenic 65.0%
GGAGCTCCTCCTTGGTGGGG+CGG - chr2_1:7253673-7253692 Msa0191640:CDS 70.0%
CGGCAGACGCAGCTGGAACC+TGG + chr2_1:7260715-7260734 None:intergenic 70.0%
GCCGCTGGAACCTGGGATCC+AGG + chr2_1:7261259-7261278 None:intergenic 70.0%
CGGCAGATGCCGCTGGAACC+TGG + chr2_1:7261267-7261286 None:intergenic 70.0%
CGGCAGACGCAGCTGGAACC+TGG + chr2_1:7260715-7260734 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 7253221 7264658 7253221 ID=Msa0191640;Name=Msa0191640
chr2_1 mRNA 7253221 7264658 7253221 ID=Msa0191640-mRNA-1;Parent=Msa0191640;Name=Msa0191640-mRNA-1;_AED=0.01;_eAED=0.01;_QI=279|1|0.83|1|0.8|0.66|6|311|835
chr2_1 exon 7253221 7254068 7253221 ID=Msa0191640-mRNA-1:exon:3302;Parent=Msa0191640-mRNA-1
chr2_1 exon 7255652 7257359 7255652 ID=Msa0191640-mRNA-1:exon:3301;Parent=Msa0191640-mRNA-1
chr2_1 exon 7258036 7258116 7258036 ID=Msa0191640-mRNA-1:exon:3300;Parent=Msa0191640-mRNA-1
chr2_1 exon 7258435 7258484 7258435 ID=Msa0191640-mRNA-1:exon:3299;Parent=Msa0191640-mRNA-1
chr2_1 exon 7264098 7264249 7264098 ID=Msa0191640-mRNA-1:exon:3298;Parent=Msa0191640-mRNA-1
chr2_1 exon 7264400 7264658 7264400 ID=Msa0191640-mRNA-1:exon:3297;Parent=Msa0191640-mRNA-1
chr2_1 five_prime_UTR 7264400 7264658 7264400 ID=Msa0191640-mRNA-1:five_prime_utr;Parent=Msa0191640-mRNA-1
chr2_1 five_prime_UTR 7264230 7264249 7264230 ID=Msa0191640-mRNA-1:five_prime_utr;Parent=Msa0191640-mRNA-1
chr2_1 CDS 7264098 7264229 7264098 ID=Msa0191640-mRNA-1:cds;Parent=Msa0191640-mRNA-1
chr2_1 CDS 7258435 7258484 7258435 ID=Msa0191640-mRNA-1:cds;Parent=Msa0191640-mRNA-1
chr2_1 CDS 7258036 7258116 7258036 ID=Msa0191640-mRNA-1:cds;Parent=Msa0191640-mRNA-1
chr2_1 CDS 7255652 7257359 7255652 ID=Msa0191640-mRNA-1:cds;Parent=Msa0191640-mRNA-1
chr2_1 CDS 7253532 7254068 7253532 ID=Msa0191640-mRNA-1:cds;Parent=Msa0191640-mRNA-1
chr2_1 three_prime_UTR 7253221 7253531 7253221 ID=Msa0191640-mRNA-1:three_prime_utr;Parent=Msa0191640-mRNA-1
Gene Sequence

>Msa0191640

ATGGGTAGATGGGGGACATGGGAGGAGCTCCTCCTTGGTGGGGCGGTTTTCCGGTACGGGACACGAGACTGGAACGTCGTCGCCGGTGAACTCCGAGAACGCATTGATTGTCCTATCCCTTTTACCCCTGAGGTCTGTAAAGCTAAGTATGAAGATTTGCAACAACGGTATTCTGGGAGCACGGATTTTTTGTATGAGGAGCTTAGGAAAAGAAGAGTAGAAGAGCTAAAGAAAGCTATTGAGCGCTCTGGAGATTCAATTGGGTCTCTTAAATCAAAGATTGAAGACCTTGAGGCTGAGAAGAATGAGGAAAAAGATGATTGTGAAAATGGCTTAGAAATTCCAGCATCACATTTACCTTCACAGAAATTGGAGAGAGTTAAATCTTCCACCAAGGAAGGCCTATCTGCCGGAAGTTTCACTCATGAAACGAGGACAAACTGGTTTCCTGAATCCCAGGTTCCAGCTGCGTCTGCCGATGATAACGAGACTAAGCCTGAAGTTTCACAATCTACTGAGCAGGATAAAGTTTCGCAATCAAAGCTTGAAGTCCTCAAGGTTGAGAAGAAGGATAAAAATCATGACTGTGAAAATGGCTTAGAAAGTCCCGTATCACATTTACCTTCCCAGAAATTGGAGAGAGTTAAATCTTCCACCAAGGAAACATCGAAGGATGGCCTATCTGCCGGAAGTTTCACTCACGAAATGAGGACAAACTGGTCTCCTGAATCCCAGGTTTCAACGCCATCTGCCGATAATAACGAAACTAAGCTTGAAGTTTTGCAATCTACTGAGCAGGCTGAAGTTTTGCAATCAAAGCTTGAAGTCCTCAAAGCTGAGAAGAACGAGAAAAAACATGGTTGTGAAAATGGCTTAGAAAGTCCCATATCACATGTACCTTCGCAGAAATTGGAGAGAGTTAAATCTTGCACTAAAGAAACATCAAAGGATGGCCTATCTGCCGGAAGTTTCACTCACAAAACGAGGACAAACTGGTCTCCTGGATCCCAGGTTCCAGCGGCATCTGCCGATGATAACGAGACTAAGCCTGAAGTTTTGCAATCTACCGAGCAGGCTAAAGTTTCGCAATCAAAGCTTGAAGTCCTCAAGGCCGAGCAGAATGAGAAAAAAGATGATTGTGAAAATGGCTTAGAAAGTCCAGTATCACATTTACCATCCCAGAAATTGGAGAGAGTTAAAACTTCCACTAAAGAAACATCAAAGGATGGCCTATCTGCCGGAAGTTTCACACACGAAACAAGGACAAACTGGTCTCCTGAATCCCAGGTTCCAGCTGCGTCTGCCGATGATAACGAGACTAAGCCTGAAGTTTCACAATCTACTGAGCAGGATAAAGTTTCGCGACCAAAGCTTGAATTCCTCATGGATGAGAAGAATGAGAAAAAAGATGATTGTGAAAATGGCTTAGAAAGTCCAGTATCACATTTACCATCCCAGAAATTGGTGAGAGTTGAATCTTCCGCTAAAGAGACATCAAAGGAAGGATTATCTGTCGGGAGTTTCACACACGAAACAAGGACAAACTGGTCTCCTGAATCCCAGGTTCCAGCTGCATCTTCCGATGATAATGAAACTAAGCCAGAAGTTTCACATTCTACTAAGCAGGCTAAAGTTTTGAATGGAGATAATTTGGAACTTACTTTATATGAAATACAAGTAGGATGTCGTAAAAAACGGAGAGGGAAGAGAAAAAGGAAGGATTGTGGAAGAAATATTATGGAAGTGGCAAGTCTAGAAGAAAGTGATGTATTAGATTCAGCTGATGTTATGTCCTGGCGTAAAGAAAGTTCTACTAGTAACTGTTGTGAAGTTGCCAAATCTTCTGCTCATGTAGACAATAAAAAAAGTAAGAACCTGAAAAAGCATAGCACGGAAGATATGATTAAGATTTTAGATTCTATTTTTGAAACTGAAGGTGCATCTGCCTTCCGTCGAAGACTTGATGGTCAGAAAAGAGGAAAGTACAAGAAAATGATCCAGCAGCACATGGACTTCGACACTATAAGGTCAAGAATTAGCAGCCGAACAATTGAATCAACCAGAGAACTATACCGAGACTTGCTGCTACTCACCAACAATGCCCTAGTCTTCTACTCGAAGATCACTCGTGAATATAAAACTGCTCTCCTTCTAAGAGGCATAGTCGCCAAAAAAATGAGGGAGAGTTTCAAGGGTAGTACTAGTAGCAGCAACAAAGTCACTGAGCCTAATGAGTCTACGAAATTACCAGTGCATCATAATCTTCATGTGAAACCAAGAAGTGTAAGACCAGGCAACAGAAAAATCATTGCAAAGGCTGTTGGTGGCGACAACTCTGCATCTTCACAAGGAGCTAAGAAGCCCATTAAAGCCGATTCTTCACATTCTGTGGAATCCTTAAATGTCATGAAGAAAGCTTTTGGTAGACAGAAAAAAGTCGGACCTGTGACTTCAAGTCAAAAGACTGCAACACCAGTGAAAGGAAGGAAAAGAGTTAGAACAAAGTAG
Protein sequence

>Msa0191640

MGRWGTWEELLLGGAVFRYGTRDWNVVAGELRERIDCPIPFTPEVCKAKYEDLQQRYSGSTDFLYEELRKRRVEELKKAIERSGDSIGSLKSKIEDLEAEKNEEKDDCENGLEIPASHLPSQKLERVKSSTKEGLSAGSFTHETRTNWFPESQVPAASADDNETKPEVSQSTEQDKVSQSKLEVLKVEKKDKNHDCENGLESPVSHLPSQKLERVKSSTKETSKDGLSAGSFTHEMRTNWSPESQVSTPSADNNETKLEVLQSTEQAEVLQSKLEVLKAEKNEKKHGCENGLESPISHVPSQKLERVKSCTKETSKDGLSAGSFTHKTRTNWSPGSQVPAASADDNETKPEVLQSTEQAKVSQSKLEVLKAEQNEKKDDCENGLESPVSHLPSQKLERVKTSTKETSKDGLSAGSFTHETRTNWSPESQVPAASADDNETKPEVSQSTEQDKVSRPKLEFLMDEKNEKKDDCENGLESPVSHLPSQKLVRVESSAKETSKEGLSVGSFTHETRTNWSPESQVPAASSDDNETKPEVSHSTKQAKVLNGDNLELTLYEIQVGCRKKRRGKRKRKDCGRNIMEVASLEESDVLDSADVMSWRKESSTSNCCEVAKSSAHVDNKKSKNLKKHSTEDMIKILDSIFETEGASAFRRRLDGQKRGKYKKMIQQHMDFDTIRSRISSRTIESTRELYRDLLLLTNNALVFYSKITREYKTALLLRGIVAKKMRESFKGSTSSSNKVTEPNESTKLPVHHNLHVKPRSVRPGNRKIIAKAVGGDNSASSQGAKKPIKADSSHSVESLNVMKKAFGRQKKVGPVTSSQKTATPVKGRKRVRTK*