AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0312320

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0312320 MtrunA17_Chr2g0281431 90.584 839 75 1 1 835 1 839 0.0 1482
Msa0312320 MtrunA17_Chr4g0047931 53.942 482 191 12 363 833 95 556 8.16e-129 397
Msa0312320 MtrunA17_Chr4g0047931 57.483 294 109 7 4 288 9 295 2.52e-89 293
Msa0312320 MtrunA17_Chr4g0047931 54.054 185 82 2 179 361 95 278 5.21e-43 165
Msa0312320 MtrunA17_Chr2g0308521 30.660 212 115 8 4 191 21 224 8.35e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0312320 AT1G61215.2 42.387 243 116 5 492 727 118 343 3.07e-41 158
Msa0312320 AT1G61215.2 43.333 120 60 3 44 156 34 152 4.14e-15 79.3
Msa0312320 AT1G61215.1 42.387 243 116 5 492 727 137 362 5.08e-41 157
Msa0312320 AT1G61215.1 50.625 160 70 4 4 156 14 171 1.11e-34 139
Msa0312320 AT2G42150.1 40.367 109 54 1 4 101 16 124 2.28e-15 80.9
Msa0312320 AT2G42150.1 32.847 137 89 2 631 764 273 409 2.50e-14 77.4
Msa0312320 AT3G60110.1 34.921 126 61 2 4 110 52 175 3.85e-14 77.0
Msa0312320 AT3G57980.1 41.000 100 53 3 633 731 298 392 1.18e-13 75.5
Msa0312320 AT3G57980.1 40.000 115 52 2 4 101 16 130 3.39e-13 73.9
Msa0312320 AT3G57980.2 40.000 115 52 2 4 101 16 130 3.46e-13 73.9
Msa0312320 AT3G57980.2 40.196 102 53 4 633 731 298 394 4.54e-12 70.1
Msa0312320 AT2G44430.1 37.895 95 58 1 634 727 312 406 3.57e-12 70.5
Msa0312320 AT2G44430.1 34.307 137 55 3 4 105 50 186 1.38e-11 68.6

Find 204 sgRNAs with CRISPR-Local

Find 683 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTTCTTCATGACATTTA+AGG 0.114278 2_4:+7332310 None:intergenic
ATTTAACTCTCTCCAATTTC+TGG 0.116999 2_4:+7335722 None:intergenic
ATTCAACTCTCACCAATTTC+TGG 0.140644 2_4:+7334894 None:intergenic
ACATTTACCTTCACAGAAAT+TGG 0.178276 2_4:-7335998 Msa0312320:CDS
AACGGAGAGGGAAGAGAAAA+AGG 0.204707 2_4:-7334655 Msa0312320:CDS
TTGCCTGGTCTTACACTTCT+TGG 0.213585 2_4:+7332431 None:intergenic
ACATTTACCTTCCCAGAAAT+TGG 0.213715 2_4:-7335734 Msa0312320:CDS
GATTTGCAACAACGGTATTC+TGG 0.224102 2_4:-7337229 Msa0312320:CDS
AATAGTACCTCAGGGGTAAA+AGG 0.234659 2_4:+7342758 None:intergenic
ACATTTACCATCCCAGAAAT+TGG 0.247654 2_4:-7335182 Msa0312320:CDS
ACATTTACCATCCCAGAAAT+TGG 0.267489 2_4:-7334906 Msa0312320:CDS
ATGTGAAGAATCGGCTTTAA+TGG 0.268812 2_4:+7332343 None:intergenic
ACATGTACCTTCGCAGAAAT+TGG 0.269177 2_4:-7335458 Msa0312320:CDS
CTGCGAAGGTACATGTGATA+TGG 0.292733 2_4:+7335465 None:intergenic
GATAATAAACTTATCCATAT+TGG 0.300905 2_4:+7332005 None:intergenic
AAGCTTAGTTTCGTTATTAT+CGG 0.303151 2_4:+7335597 None:intergenic
CGTGGACGGTGATGGGTAGA+TGG 0.303874 2_4:-7342886 Msa0312320:exon
GGCGTTGAAACCTGGGATTC+AGG 0.314819 2_4:+7335625 None:intergenic
CGGCAGATGGCGTTGAAACC+TGG 0.327929 2_4:+7335617 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.328172 2_4:+7334797 None:intergenic
TTAGTAGAATGTGAAACTTC+TGG 0.329727 2_4:+7334749 None:intergenic
GCCTTCCGTCGAAGACTTGA+TGG 0.337126 2_4:-7334404 Msa0312320:CDS
GGTAATTTCGTAGACTCATT+AGG 0.339504 2_4:+7332479 None:intergenic
CGGCAGATGCCGCTGGAACC+TGG 0.342790 2_4:+7335341 None:intergenic
CGGCAGACGCAGCTGGAACC+TGG 0.344074 2_4:+7335065 None:intergenic
CGGCAGACGCAGCTGGAACC+TGG 0.344074 2_4:+7335893 None:intergenic
GTCTACATGAGCAGAAGATT+TGG 0.347205 2_4:+7334514 None:intergenic
CTCTGGTTGATTCAATTGTT+CGG 0.351506 2_4:+7332663 None:intergenic
AAAGTTATAGTTAACCAATA+TGG 0.363318 2_4:-7332019 Msa0312320:three_prime_UTR
TCTCGTTCTTCTCAGCTTTG+AGG 0.365599 2_4:+7335521 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.367686 2_4:+7335073 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.367686 2_4:+7335901 None:intergenic
ATCCTTTGATGTTTCTTTAG+TGG 0.371469 2_4:+7335144 None:intergenic
TGGGAGGAGCTCCTCCTTGG+TGG 0.373960 2_4:-7342857 Msa0312320:CDS
GAGCGCTCTGGAGATTCAAT+TGG 0.376339 2_4:-7336825 Msa0312320:CDS
GGATTGTGGAAGAAATATTA+TGG 0.379577 2_4:-7334630 Msa0312320:CDS
TGGCGACTATGCCTCTTAGA+AGG 0.380669 2_4:+7332558 None:intergenic
TCCGGTACGGGACACGAGAC+TGG 0.380957 2_4:-7342826 Msa0312320:CDS
ACATGGGAGGAGCTCCTCCT+TGG 0.388138 2_4:-7342860 Msa0312320:CDS
TGTGAAGAATCGGCTTTAAT+GGG 0.388925 2_4:+7332344 None:intergenic
CGGAAGATGCAGCTGGAACC+TGG 0.391729 2_4:+7334789 None:intergenic
TCAGTAGATTGTGAAACTTC+AGG 0.392693 2_4:+7335025 None:intergenic
TCAGTAGATTGTGAAACTTC+AGG 0.392693 2_4:+7335853 None:intergenic
AATGTCATGAAGAAAGCTTT+TGG 0.408688 2_4:-7332305 Msa0312320:CDS
TTCAACTCTCACCAATTTCT+GGG 0.408744 2_4:+7334895 None:intergenic
TTTAACTCTCTCCAATTTCT+GGG 0.408843 2_4:+7335171 None:intergenic
TCGGTAGATTGCAAAACTTC+AGG 0.410370 2_4:+7335301 None:intergenic
GCTTACCGGTGTCGGAAAAC+CGG 0.410663 2_4:+7343059 None:intergenic
GCCGCTGGAACCTGGGATCC+AGG 0.413242 2_4:+7335349 None:intergenic
ACATGGACTTCGACACTATA+AGG 0.413827 2_4:-7332700 Msa0312320:CDS
GGCAGATAGGCCTTCCTTGG+TGG 0.414688 2_4:+7335960 None:intergenic
GGGAGGAGCTCCTCCTTGGT+GGG 0.417029 2_4:-7342856 Msa0312320:CDS
ATTTGCAACAACGGTATTCT+GGG 0.420187 2_4:-7337228 Msa0312320:CDS
GCCATCCTTCGATGTTTCCT+TGG 0.421394 2_4:+7335693 None:intergenic
CTCACAAAACGAGGACAAAC+TGG 0.423655 2_4:-7335375 Msa0312320:CDS
TTTAACTCTCTCCAATTTCT+GGG 0.430061 2_4:+7335723 None:intergenic
CAAGTCTCGGTATAGTTCTC+TGG 0.431082 2_4:+7332646 None:intergenic
CTCATGAAACGAGGACAAAC+TGG 0.434890 2_4:-7335927 Msa0312320:CDS
TGTTTCGTGTGTGAAACTTC+CGG 0.436007 2_4:+7335111 None:intergenic
TTATCATCGGCAGACGCAGC+TGG 0.437623 2_4:+7335058 None:intergenic
TTATCATCGGCAGACGCAGC+TGG 0.437623 2_4:+7335886 None:intergenic
TGGGATGGTAAATGTGATAC+TGG 0.437681 2_4:+7334914 None:intergenic
TGGGATGGTAAATGTGATAC+TGG 0.437681 2_4:+7335190 None:intergenic
CTCACGAAATGAGGACAAAC+TGG 0.441034 2_4:-7335651 Msa0312320:CDS
TACACTTTGATGTAAATTGT+AGG 0.444799 2_4:-7331941 Msa0312320:three_prime_UTR
TTCCTTTGATGTCTCTTTAG+CGG 0.445950 2_4:+7334868 None:intergenic
GGTGAGGGATTCTATTTGTA+AGG 0.446188 2_4:+7343269 None:intergenic
GGCAGATGCCGCTGGAACCT+GGG 0.447609 2_4:+7335342 None:intergenic
CACACGAAACAAGGACAAAC+TGG 0.447900 2_4:-7334823 Msa0312320:CDS
CACACGAAACAAGGACAAAC+TGG 0.447900 2_4:-7335099 Msa0312320:CDS
CGTTTCATGAGTGAAACTTC+CGG 0.449518 2_4:+7335939 None:intergenic
TTATCATCGGCAGATGCCGC+TGG 0.451602 2_4:+7335334 None:intergenic
GTAGAAGACTAGGGCATTGT+TGG 0.455570 2_4:+7332613 None:intergenic
ACGAGGACAAACTGGTCTCC+TGG 0.456758 2_4:-7335367 Msa0312320:CDS
ATAGAGTAAGCGTGAGAAGA+GGG 0.456916 2_4:+7343246 None:intergenic
TCCATGAGGAATTCAAGCTT+TGG 0.458554 2_4:+7334983 None:intergenic
CATACCCACGTCAGAGAAAC+CGG 0.462893 2_4:-7343078 Msa0312320:five_prime_UTR
CCTCATTCTTCTCAGCCTCA+AGG 0.463301 2_4:+7336061 None:intergenic
CCTATTTGACAACAGAAAAG+AGG 0.465236 2_4:-7332749 Msa0312320:intron
TCCGGCAGATAGGCCTTCCT+TGG 0.468617 2_4:+7335957 None:intergenic
TGTCGAAGTCCATGTGCTGC+TGG 0.468742 2_4:+7332708 None:intergenic
AGTTTCACATTCTACTAAGC+AGG 0.470786 2_4:-7334744 Msa0312320:CDS
CATTTCGTGAGTGAAACTTC+CGG 0.471724 2_4:+7335663 None:intergenic
GTGGACGGTGATGGGTAGAT+GGG 0.472049 2_4:-7342885 Msa0312320:exon
TTCCACAGAATGTGAAGAAT+CGG 0.472831 2_4:+7332334 None:intergenic
ATCCTTCGATGTTTCCTTGG+TGG 0.477301 2_4:+7335696 None:intergenic
GGAGCTCCTCCTTGGTGGGG+CGG 0.479990 2_4:-7342852 Msa0312320:CDS
AGCCGATTCTTCACATTCTG+TGG 0.481332 2_4:-7332336 Msa0312320:CDS
CTGGGAAGGTAAATGTGATA+CGG 0.488701 2_4:+7335741 None:intergenic
GGCAGACGCAGCTGGAACCT+GGG 0.489961 2_4:+7335066 None:intergenic
GGCAGACGCAGCTGGAACCT+GGG 0.489961 2_4:+7335894 None:intergenic
AGCGCTCTGGAGATTCAATT+GGG 0.492698 2_4:-7336824 Msa0312320:intron
TCCAGTCTCGTGTCCCGTAC+CGG 0.492867 2_4:+7342825 None:intergenic
TGGAAGAAATATTATGGAAG+TGG 0.494670 2_4:-7334624 Msa0312320:CDS
CCGTCGAAGACTTGATGGTC+AGG 0.495020 2_4:-7334399 Msa0312320:intron
GAGTGAAACTTCCGGCAGAT+AGG 0.495730 2_4:+7335947 None:intergenic
AAACTGGTCTCCTGGATCCC+AGG 0.496812 2_4:-7335359 Msa0312320:CDS
CAAAGGAAGGATTATCTGTC+GGG 0.497613 2_4:-7334853 Msa0312320:CDS
GTGTGAAACTTCCGGCAGAT+AGG 0.498762 2_4:+7335119 None:intergenic
ATAGTACCTCAGGGGTAAAA+GGG 0.499560 2_4:+7342759 None:intergenic
GAGTGAAACTTCCGGCAGAT+AGG 0.501201 2_4:+7335671 None:intergenic
TGCGAAGGTACATGTGATAT+GGG 0.505813 2_4:+7335466 None:intergenic
ACTCTCTCCAATTTCTGGGA+TGG 0.506480 2_4:+7335175 None:intergenic
AGTCCTCAAGGTTGAGAAGA+AGG 0.506878 2_4:-7335800 Msa0312320:CDS
ACTCTCTCCAATTTCTGTGA+AGG 0.509839 2_4:+7335991 None:intergenic
GAGTGAAACTTCCGGCAGAT+AGG 0.510135 2_4:+7335395 None:intergenic
AAAATAAGGCTTACCGGTGT+CGG 0.510309 2_4:+7343051 None:intergenic
ACTCTCTCCAATTTCTGGGA+AGG 0.512135 2_4:+7335727 None:intergenic
GGCAGATGGCGTTGAAACCT+GGG 0.515132 2_4:+7335618 None:intergenic
AGTAGAACTTTCTTTACGCC+AGG 0.515174 2_4:+7334556 None:intergenic
TCTCATTCTGCTCGGCCTTG+AGG 0.515915 2_4:+7335245 None:intergenic
TGTAGTTTATTGAAGGAGGA+AGG 0.518229 2_4:-7332120 Msa0312320:three_prime_UTR
AAGAAAGCTATTGAGCGCTC+TGG 0.520819 2_4:-7336837 Msa0312320:CDS
ACATGAAGATTATGATGCAC+TGG 0.521987 2_4:+7332458 None:intergenic
AAAACTGCTCTCCTTCTAAG+AGG 0.523048 2_4:-7332569 Msa0312320:CDS
TGGCTTAGTTTCATTATCAT+CGG 0.525043 2_4:+7334769 None:intergenic
GGAGGAGCTCCTCCTTGGTG+GGG 0.528293 2_4:-7342855 Msa0312320:CDS
GACGTACACGTGGACGGTGA+TGG 0.528307 2_4:-7342894 Msa0312320:exon
ATCATTGCAAAGGCTGTTGG+TGG 0.531039 2_4:-7332401 Msa0312320:CDS
TTTGATGTAAATTGTAGGCA+AGG 0.533063 2_4:-7331936 Msa0312320:three_prime_UTR
TGTGAAGGTAAATGTGATGC+TGG 0.533695 2_4:+7336006 None:intergenic
AATGAACTTGAGTTAGATGC+AGG 0.533923 2_4:-7332081 Msa0312320:three_prime_UTR
AAAATCATTGCAAAGGCTGT+TGG 0.537560 2_4:-7332404 Msa0312320:CDS
ACCAAGGAAGGCCTATCTGC+CGG 0.540490 2_4:-7335958 Msa0312320:CDS
AGTTTCACAATCTACTGAGC+AGG 0.540791 2_4:-7335020 Msa0312320:CDS
AGTTTCACAATCTACTGAGC+AGG 0.540791 2_4:-7335848 Msa0312320:CDS
AAACTGGTTTCCTGAATCCC+AGG 0.541785 2_4:-7335911 Msa0312320:CDS
TCAAAGGATGGCCTATCTGC+CGG 0.543453 2_4:-7335130 Msa0312320:CDS
TCAAAGGATGGCCTATCTGC+CGG 0.543453 2_4:-7335406 Msa0312320:CDS
TCGAAGGATGGCCTATCTGC+CGG 0.543453 2_4:-7335682 Msa0312320:CDS
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 2_4:+7335045 None:intergenic
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 2_4:+7335321 None:intergenic
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 2_4:+7335873 None:intergenic
GTTTCGTTATTATCGGCAGA+TGG 0.547357 2_4:+7335604 None:intergenic
TATCCTTCTTCTCAACCTTG+AGG 0.547638 2_4:+7335797 None:intergenic
AAACTGGTCTCCTGAATCCC+AGG 0.547815 2_4:-7334807 Msa0312320:CDS
AAACTGGTCTCCTGAATCCC+AGG 0.547815 2_4:-7335083 Msa0312320:CDS
AAACTGGTCTCCTGAATCCC+AGG 0.547815 2_4:-7335635 Msa0312320:CDS
AGAGTAAGCGTGAGAAGAGG+GGG 0.548257 2_4:+7343248 None:intergenic
CTGCAACACCAGTGAAAGGA+AGG 0.551244 2_4:-7332241 Msa0312320:CDS
TGATCTTCGAGTAGAAGACT+AGG 0.551667 2_4:+7332603 None:intergenic
ACGTACACGTGGACGGTGAT+GGG 0.551870 2_4:-7342893 Msa0312320:exon
TTGCGAAACTTTAGCCTGCT+CGG 0.552400 2_4:+7335282 None:intergenic
ACTCTCACCAATTTCTGGGA+TGG 0.553891 2_4:+7334899 None:intergenic
AATAGAGTAAGCGTGAGAAG+AGG 0.555901 2_4:+7343245 None:intergenic
ACTTTATATGAAATACAAGT+AGG 0.556142 2_4:-7334689 Msa0312320:CDS
AATGCGTTCTCGAAGTTCAC+CGG 0.557103 2_4:+7342793 None:intergenic
TCCTGGATCCCAGGTTCCAG+CGG 0.557730 2_4:-7335350 Msa0312320:CDS
TTGGTGTAGTTTATTGAAGG+AGG 0.558471 2_4:-7332124 Msa0312320:three_prime_UTR
AAAATGAGGGAGAGTTTCAA+GGG 0.558959 2_4:-7332533 Msa0312320:CDS
TAGAGTAAGCGTGAGAAGAG+GGG 0.559235 2_4:+7343247 None:intergenic
TGGGAAGGTAAATGTGATAC+GGG 0.559327 2_4:+7335742 None:intergenic
ACCATCAAGTCTTCGACGGA+AGG 0.559496 2_4:+7334403 None:intergenic
CGAGACTGGAACGTCGTCGC+CGG 0.566409 2_4:-7342812 Msa0312320:CDS
ACCAAAGCTTGAATTCCTCA+TGG 0.567620 2_4:-7334984 Msa0312320:CDS
GAAGTTTCACTCACGAAATG+AGG 0.567743 2_4:-7335660 Msa0312320:CDS
GGAAGATGCAGCTGGAACCT+GGG 0.568210 2_4:+7334790 None:intergenic
GTTAAATCTTCCACCAAGGA+AGG 0.569733 2_4:-7335970 Msa0312320:CDS
TTATCATCGGAAGATGCAGC+TGG 0.573606 2_4:+7334782 None:intergenic
ATTCAGCTGATGTTATGTCC+TGG 0.574362 2_4:-7334574 Msa0312320:CDS
ACTCTCTCCAATTTCTGCGA+AGG 0.574819 2_4:+7335451 None:intergenic
GACAACTCTGCATCTTCACA+AGG 0.577577 2_4:-7332377 Msa0312320:CDS
TCAAAGGAAGGATTATCTGT+CGG 0.582759 2_4:-7334854 Msa0312320:CDS
ATCAGGGACGTACACGTGGA+CGG 0.585049 2_4:-7342900 Msa0312320:intron
AAAACCGGTTTCTCTGACGT+GGG 0.592498 2_4:+7343074 None:intergenic
GGAGTTTCACACACGAAACA+AGG 0.592533 2_4:-7334832 Msa0312320:CDS
GAAGTTTCACACACGAAACA+AGG 0.592533 2_4:-7335108 Msa0312320:CDS
ATCAAAGCTTGAAGTCCTCA+AGG 0.595488 2_4:-7335260 Msa0312320:CDS
ACCGGAAAACCGCCCCACCA+AGG 0.597321 2_4:+7342843 None:intergenic
TCCGGCGAGAATTTCGGGAA+TGG 0.599880 2_4:+7343108 None:intergenic
ACCTCAGGGGTAAAAGGGAT+AGG 0.601507 2_4:+7342764 None:intergenic
ATCAAAGATTGAAGACCTTG+AGG 0.601679 2_4:-7336076 Msa0312320:CDS
AAGACTGCAACACCAGTGAA+AGG 0.602633 2_4:-7332245 Msa0312320:CDS
GAAAATGATCCAGCAGCACA+TGG 0.603766 2_4:-7332717 Msa0312320:CDS
CCTTGAGGCTGAGAAGAATG+AGG 0.604647 2_4:-7336061 Msa0312320:CDS
GGATAAGTTTATTATCAAAG+TGG 0.605616 2_4:-7331998 Msa0312320:three_prime_UTR
ATCAAAGCTTGAAGTCCTCA+AGG 0.605753 2_4:-7335812 Msa0312320:CDS
GAACTTGAGTTAGATGCAGG+AGG 0.608296 2_4:-7332078 Msa0312320:three_prime_UTR
TTGCACTAAAGAAACATCAA+AGG 0.610129 2_4:-7335422 Msa0312320:CDS
TTCCACTAAAGAAACATCAA+AGG 0.611385 2_4:-7335146 Msa0312320:CDS
ACCATTCCCGAAATTCTCGC+CGG 0.614241 2_4:-7343109 Msa0312320:five_prime_UTR
ACTAAAGAAACATCAAAGGA+TGG 0.614875 2_4:-7335142 Msa0312320:CDS
ACCAAGGAAACATCGAAGGA+TGG 0.615920 2_4:-7335694 Msa0312320:CDS
AATAATCAGGGACGTACACG+TGG 0.616115 2_4:-7342904 Msa0312320:intron
TGGACGGTGATGGGTAGATG+GGG 0.616380 2_4:-7342884 Msa0312320:exon
TCTCATTCTTCTCATCCATG+AGG 0.618938 2_4:+7334969 None:intergenic
GAAAACCGGTTTCTCTGACG+TGG 0.620355 2_4:+7343073 None:intergenic
CCTGACCATCAAGTCTTCGA+CGG 0.624531 2_4:+7334399 None:intergenic
TTCCACCAAGGAAACATCGA+AGG 0.625809 2_4:-7335698 Msa0312320:CDS
ACTAAAGAAACATCAAAGGA+TGG 0.630887 2_4:-7335418 Msa0312320:CDS
GCTAAAGAGACATCAAAGGA+AGG 0.634567 2_4:-7334866 Msa0312320:CDS
TTCCGCTAAAGAGACATCAA+AGG 0.636984 2_4:-7334870 Msa0312320:CDS
TGGTGAGTAGCAGCAAGTCT+CGG 0.639685 2_4:+7332633 None:intergenic
AACTTGAGTTAGATGCAGGA+GGG 0.650685 2_4:-7332077 Msa0312320:three_prime_UTR
GATCTTCGAGTAGAAGACTA+GGG 0.651766 2_4:+7332604 None:intergenic
AAACCAAGAAGTGTAAGACC+AGG 0.662834 2_4:-7332434 Msa0312320:CDS
AGTATGAAGATTTGCAACAA+CGG 0.672440 2_4:-7337237 Msa0312320:CDS
GGACGGTGATGGGTAGATGG+GGG 0.676840 2_4:-7342883 Msa0312320:exon
GGAAAACCGCCCCACCAAGG+AGG 0.682090 2_4:+7342846 None:intergenic
GAGAGTTAAATCTTCCACCA+AGG 0.685418 2_4:-7335710 Msa0312320:CDS
GAGAGTTAAATCTTCCACCA+AGG 0.692239 2_4:-7335974 Msa0312320:CDS
GAAGTTTCACTCACAAAACG+AGG 0.701520 2_4:-7335384 Msa0312320:CDS
AATTAATAATAGTACCTCAG+GGG 0.721941 2_4:+7342751 None:intergenic
GAAGTTTCACTCATGAAACG+AGG 0.747697 2_4:-7335936 Msa0312320:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAATTAAATAATT+TGG - chr2_4:7332482-7332501 Msa0312320:CDS 0.0%
!! AAATTAAAATATTTAAATTT+AGG - chr2_4:7335884-7335903 Msa0312320:CDS 0.0%
!! TATGTTATTATAAATAATCA+GGG - chr2_4:7332297-7332316 Msa0312320:CDS 10.0%
!!! TTATTTTTCTCTTTTTTTAT+TGG - chr2_4:7334504-7334523 Msa0312320:CDS 10.0%
!! AAAAAAAAATCAAAACTAAA+AGG - chr2_4:7334675-7334694 Msa0312320:CDS 10.0%
!!! ATTTTATCTATTGAAAATAT+TGG - chr2_4:7334949-7334968 Msa0312320:CDS 10.0%
!!! ATATTTACAACTATTTTTTT+TGG + chr2_4:7335183-7335202 None:intergenic 10.0%
!!! TTTAAAATAAAAAAAGTCAT+TGG + chr2_4:7335309-7335328 None:intergenic 10.0%
!!! ATTTTTAATGTTAATAAATG+AGG - chr2_4:7335380-7335399 Msa0312320:CDS 10.0%
!!! ATCCTAAATATTTTTTTTAA+AGG - chr2_4:7335693-7335712 Msa0312320:CDS 10.0%
!!! ATCCTTTAAAAAAAATATTT+AGG + chr2_4:7335698-7335717 None:intergenic 10.0%
!! TATTCATATAAAATATGAAT+TGG - chr2_4:7335717-7335736 Msa0312320:CDS 10.0%
!! ATTCATATAAAATATGAATT+GGG - chr2_4:7335718-7335737 Msa0312320:CDS 10.0%
!!! TTTATTTTTTAGCTTTTTTT+TGG - chr2_4:7336343-7336362 Msa0312320:intron 10.0%
!!! AAATTATTTACTACTTTTTT+AGG + chr2_4:7336508-7336527 None:intergenic 10.0%
!! TATTATTAACTAAACTAAAA+AGG - chr2_4:7337329-7337348 Msa0312320:intron 10.0%
!! ATTATTAACTAAACTAAAAA+GGG - chr2_4:7337330-7337349 Msa0312320:intron 10.0%
!! ATTAAAATTATATAAAAGTG+TGG - chr2_4:7339088-7339107 Msa0312320:intron 10.0%
!! AAGACAGAAAAAATAAAATA+AGG + chr2_4:7332179-7332198 None:intergenic 15.0%
!!! TTTTATAATTTCAAACAACA+TGG - chr2_4:7332246-7332265 Msa0312320:CDS 15.0%
!! GTATGTTATTATAAATAATC+AGG - chr2_4:7332296-7332315 Msa0312320:CDS 15.0%
!!! TAATTTGGATTTTTTTTTGA+AGG - chr2_4:7332497-7332516 Msa0312320:CDS 15.0%
!!! TTTTTGAACTTTTTCATTAT+GGG + chr2_4:7332559-7332578 None:intergenic 15.0%
!!! TTTTTTGAACTTTTTCATTA+TGG + chr2_4:7332560-7332579 None:intergenic 15.0%
!!! ATTTTTAATTCGTAATTTGT+GGG + chr2_4:7332693-7332712 None:intergenic 15.0%
!!! TATTTTTAATTCGTAATTTG+TGG + chr2_4:7332694-7332713 None:intergenic 15.0%
!! CAAATTACGAATTAAAAATA+TGG - chr2_4:7332694-7332713 Msa0312320:CDS 15.0%
!!! TTTTTTAATGATTAGTGTTA+TGG - chr2_4:7332762-7332781 Msa0312320:intron 15.0%
!! TAATGTAAAATAACTACATT+AGG - chr2_4:7333592-7333611 Msa0312320:intron 15.0%
!! AATGTAAAATAACTACATTA+GGG - chr2_4:7333593-7333612 Msa0312320:intron 15.0%
!! CAAATTTAATTCTTATACAT+AGG + chr2_4:7333967-7333986 None:intergenic 15.0%
!!! TAAATCCTACTTATTTTTAA+GGG - chr2_4:7334028-7334047 Msa0312320:intron 15.0%
!!! ATGTTGATGAAAATTTTTAT+AGG - chr2_4:7334229-7334248 Msa0312320:intron 15.0%
!!! TGTTGATGAAAATTTTTATA+GGG - chr2_4:7334230-7334249 Msa0312320:intron 15.0%
!!! AAAATGTGATTTTATTTTGT+AGG - chr2_4:7334258-7334277 Msa0312320:intron 15.0%
!!! AAATGTGATTTTATTTTGTA+GGG - chr2_4:7334259-7334278 Msa0312320:intron 15.0%
!! ACAAAATTCTGAATATTTAT+AGG - chr2_4:7334289-7334308 Msa0312320:intron 15.0%
!! CAAAATTCTGAATATTTATA+GGG - chr2_4:7334290-7334309 Msa0312320:intron 15.0%
!! AAAAAACTAGATAATATGAA+TGG + chr2_4:7334720-7334739 None:intergenic 15.0%
!!! TTAATTTTTGACAATTTCTT+TGG - chr2_4:7334819-7334838 Msa0312320:CDS 15.0%
!!! CAATATTTACAACTTTTTTT+TGG + chr2_4:7335133-7335152 None:intergenic 15.0%
!!! ACAATGTTTTATTGTATAAA+TGG - chr2_4:7335259-7335278 Msa0312320:CDS 15.0%
!!! AACAATTAGTGTTTTTTTTT+AGG - chr2_4:7335334-7335353 Msa0312320:CDS 15.0%
!!! CAAAAAAAGTTTTTTATTGA+AGG + chr2_4:7335538-7335557 None:intergenic 15.0%
!!! CAATTTTTGTTAACTTAAAT+CGG + chr2_4:7335621-7335640 None:intergenic 15.0%
!!! TATCTTTTTTTATTTTGCTT+CGG + chr2_4:7336052-7336071 None:intergenic 15.0%
!! ATATAATAATAGAGGATAAA+GGG + chr2_4:7337306-7337325 None:intergenic 15.0%
!! AATATAATAATAGAGGATAA+AGG + chr2_4:7337307-7337326 None:intergenic 15.0%
!!! AAAAAATTGTGTTGTTTAAT+TGG - chr2_4:7337626-7337645 Msa0312320:intron 15.0%
!!! TTTTGTACAAAAATAATAGA+AGG - chr2_4:7337892-7337911 Msa0312320:intron 15.0%
!!! TCTCATATATCAATTAATTT+TGG - chr2_4:7338755-7338774 Msa0312320:intron 15.0%
!! TAAGATCAAAATTATTTGAT+AGG + chr2_4:7341139-7341158 None:intergenic 15.0%
!! TAAGATCAAAATTATTTGAT+AGG + chr2_4:7341139-7341158 None:intergenic 15.0%
!!! TATTTAACCTAATTCTAAAA+TGG - chr2_4:7341601-7341620 Msa0312320:intron 15.0%
!!! ATTTAACCTAATTCTAAAAT+GGG - chr2_4:7341602-7341621 Msa0312320:intron 15.0%
!! ATTTCATTACAAAAATACAT+AGG + chr2_4:7341715-7341734 None:intergenic 15.0%
!! AAAAATAAAATAAGGCTTAC+CGG + chr2_4:7332171-7332190 None:intergenic 20.0%
!!! TTTATTTTTTCTGTCTTTTC+CGG - chr2_4:7332182-7332201 Msa0312320:three_prime_UTR 20.0%
!! TAATTAATAATAGTACCTCA+GGG + chr2_4:7332466-7332485 None:intergenic 20.0%
!! TTAATTAATAATAGTACCTC+AGG + chr2_4:7332467-7332486 None:intergenic 20.0%
!!! GATTTTTTTTTGAAGGATTT+TGG - chr2_4:7332504-7332523 Msa0312320:CDS 20.0%
!!! TTAATGCTTTATTGTTGAAT+TGG - chr2_4:7332883-7332902 Msa0312320:intron 20.0%
!!! TAATGCTTTATTGTTGAATT+GGG - chr2_4:7332884-7332903 Msa0312320:intron 20.0%
!!! TTACGCATTTTACATATTTT+TGG + chr2_4:7333066-7333085 None:intergenic 20.0%
!!! ATCCTATTCTAAATTTGTTT+TGG - chr2_4:7333111-7333130 Msa0312320:intron 20.0%
!! GCTAGAATAATATATATTGT+GGG - chr2_4:7333187-7333206 Msa0312320:intron 20.0%
!! AAATTACAAGAATCATTACA+AGG - chr2_4:7333230-7333249 Msa0312320:intron 20.0%
!!! TTTTTTGTAGTAGTTGAATT+CGG - chr2_4:7333484-7333503 Msa0312320:intron 20.0%
!!! AATTAATTTTCTCCTTTTGT+GGG + chr2_4:7333528-7333547 None:intergenic 20.0%
!!! AAATTAATTTTCTCCTTTTG+TGG + chr2_4:7333529-7333548 None:intergenic 20.0%
!!! GAATTAAATTTGTTTTTGAG+AGG - chr2_4:7333975-7333994 Msa0312320:intron 20.0%
!!! CTAAATCCTACTTATTTTTA+AGG - chr2_4:7334027-7334046 Msa0312320:intron 20.0%
!! ATTAACCCTTAAAAATAAGT+AGG + chr2_4:7334036-7334055 None:intergenic 20.0%
!! CAAAACTGTGAATATTTATA+GGG + chr2_4:7334071-7334090 None:intergenic 20.0%
!! ACAAAACTGTGAATATTTAT+AGG + chr2_4:7334072-7334091 None:intergenic 20.0%
!!! AAGTGTGATTTTATTTTGTA+GGG + chr2_4:7334102-7334121 None:intergenic 20.0%
!!! AAAGTGTGATTTTATTTTGT+AGG + chr2_4:7334103-7334122 None:intergenic 20.0%
!!! AAGTCAAAGACATATTTTTA+AGG - chr2_4:7334403-7334422 Msa0312320:CDS 20.0%
!!! TTCATATAAAAGGGTATAAA+AGG - chr2_4:7334432-7334451 Msa0312320:CDS 20.0%
!!! TTTTTATTGGTCAAAAACAA+TGG - chr2_4:7334517-7334536 Msa0312320:CDS 20.0%
!! ACAAATATCATTTCTCTAAA+AGG - chr2_4:7334624-7334643 Msa0312320:CDS 20.0%
!!! TATTTACAACTTTTTTTTGG+TGG + chr2_4:7335130-7335149 None:intergenic 20.0%
!!! TTTACAACTATTTTTTTTGG+TGG + chr2_4:7335180-7335199 None:intergenic 20.0%
!! AGATTATGCAAAAATAGTTA+AGG + chr2_4:7335515-7335534 None:intergenic 20.0%
!!! TGATAAGTTTAGGATTAAAA+CGG + chr2_4:7335647-7335666 None:intergenic 20.0%
!! AGATAAAACATGATAAGTTT+AGG + chr2_4:7335657-7335676 None:intergenic 20.0%
!! AATTATATTACCAAACCAAA+AGG - chr2_4:7335956-7335975 Msa0312320:CDS 20.0%
!! ATATATTTAATTGTTTCGCT+AGG - chr2_4:7336409-7336428 Msa0312320:intron 20.0%
!! TATATTTAATTGTTTCGCTA+GGG - chr2_4:7336410-7336429 Msa0312320:intron 20.0%
!!! ACTATTTTAAACTAATGGTT+AGG + chr2_4:7336612-7336631 None:intergenic 20.0%
!!! ACTCAACTATTTTAAACTAA+TGG + chr2_4:7336617-7336636 None:intergenic 20.0%
!!! AATTTTATAAAAGAGAGGTT+AGG + chr2_4:7337553-7337572 None:intergenic 20.0%
!!! TAACCTCTCTTTTATAAAAT+TGG - chr2_4:7337552-7337571 Msa0312320:intron 20.0%
!!! TTACCAATTTTATAAAAGAG+AGG + chr2_4:7337558-7337577 None:intergenic 20.0%
!!! ATAAAATTGGTAATCAGAAA+TGG - chr2_4:7337565-7337584 Msa0312320:intron 20.0%
!! AATTGGTAAATTTATGTAGA+TGG - chr2_4:7337643-7337662 Msa0312320:intron 20.0%
!!! TTTATTTTGTTTCCTAGTTT+TGG - chr2_4:7337817-7337836 Msa0312320:intron 20.0%
!!! TTTTTGTTATAAACTTTTCC+TGG - chr2_4:7338034-7338053 Msa0312320:intron 20.0%
!! GATAAAAATTTAGGAATGAT+AGG - chr2_4:7338551-7338570 Msa0312320:intron 20.0%
!! ATTAATTGATATATGAGAAG+CGG + chr2_4:7338753-7338772 None:intergenic 20.0%
!! TTTCAATACTCATTTCTATA+TGG - chr2_4:7338815-7338834 Msa0312320:intron 20.0%
!!! TTTACAATTACCTTTGTTTT+AGG + chr2_4:7338872-7338891 None:intergenic 20.0%
!! TAAGAATGTGTTGAATTATA+CGG + chr2_4:7339069-7339088 None:intergenic 20.0%
!! AAAAAAGATGATTGTGAAAA+TGG - chr2_4:7339990-7340009 Msa0312320:intron 20.0%
!! AAAAAAGATGATTGTGAAAA+TGG - chr2_4:7339990-7340009 Msa0312320:intron 20.0%
!! ACTTTATATGAAATACAAGT+AGG - chr2_4:7340524-7340543 Msa0312320:intron 20.0%
!!! ATTTTGATTTTTACCTATGA+TGG - chr2_4:7340944-7340963 Msa0312320:intron 20.0%
!!! TTAAGTTTTTTTTTCCACAT+AGG - chr2_4:7341321-7341340 Msa0312320:intron 20.0%
!!! ACACATGTATATTTTTGTAA+CGG + chr2_4:7341377-7341396 None:intergenic 20.0%
!! TAGAATTAGGTTAAATAGTT+TGG + chr2_4:7341598-7341617 None:intergenic 20.0%
!! TAAACAACTTAACAAGTTAA+AGG - chr2_4:7341823-7341842 Msa0312320:intron 20.0%
!! AAAGTTATAGTTAACCAATA+TGG - chr2_4:7343194-7343213 Msa0312320:five_prime_UTR 20.0%
!! GATAATAAACTTATCCATAT+TGG + chr2_4:7343211-7343230 None:intergenic 20.0%
!!! TTTTGCTGTCGAAAAAAATA+AGG + chr2_4:7332045-7332064 None:intergenic 25.0%
! TATAATTTCAAACAACATGG+CGG - chr2_4:7332249-7332268 Msa0312320:CDS 25.0%
! TTTATAATAACATACGCACA+CGG + chr2_4:7332291-7332310 None:intergenic 25.0%
! AATTAATAATAGTACCTCAG+GGG + chr2_4:7332465-7332484 None:intergenic 25.0%
! CATTATGGGAAAAAACAAAA+AGG + chr2_4:7332545-7332564 None:intergenic 25.0%
!! AAACATTGGTTAATACATGA+TGG + chr2_4:7332630-7332649 None:intergenic 25.0%
!! TGTATTAACCAATGTTTTCT+TGG - chr2_4:7332633-7332652 Msa0312320:CDS 25.0%
!! GTATTAACCAATGTTTTCTT+GGG - chr2_4:7332634-7332653 Msa0312320:CDS 25.0%
! TAAATATCCCAAGAAAACAT+TGG + chr2_4:7332644-7332663 None:intergenic 25.0%
! TAAAAGAATAGGAAAAAGAG+AGG - chr2_4:7332795-7332814 Msa0312320:intron 25.0%
! AAAAGAATAGGAAAAAGAGA+GGG - chr2_4:7332796-7332815 Msa0312320:intron 25.0%
!!! TTTTACATATTTTTGGTCGT+TGG + chr2_4:7333059-7333078 None:intergenic 25.0%
!! AGCCAAAACAAATTTAGAAT+AGG + chr2_4:7333116-7333135 None:intergenic 25.0%
!!! AATATAAACTTTTGAGAGCA+TGG - chr2_4:7333141-7333160 Msa0312320:intron 25.0%
!!! ACCCTATTCTAAATTTGTTT+TGG - chr2_4:7333165-7333184 Msa0312320:intron 25.0%
!! GCCAAAACAAATTTAGAATA+GGG + chr2_4:7333115-7333134 None:intergenic 25.0%
!! AGCCAAAACAAATTTAGAAT+AGG + chr2_4:7333116-7333135 None:intergenic 25.0%
! GGCTAGAATAATATATATTG+TGG - chr2_4:7333186-7333205 Msa0312320:intron 25.0%
! GAATAATATATATTGTGGGA+CGG - chr2_4:7333191-7333210 Msa0312320:intron 25.0%
! TAGATTAACGAATCATTACA+AGG - chr2_4:7333260-7333279 Msa0312320:intron 25.0%
! ATTTAAAAACAGTCTACACA+TGG - chr2_4:7333414-7333433 Msa0312320:intron 25.0%
!!! AACGTGTAAAGATTTGTTTT+AGG + chr2_4:7333722-7333741 None:intergenic 25.0%
! TCATTGCATAACATATATAG+AGG - chr2_4:7333846-7333865 Msa0312320:intron 25.0%
!! ACATTTTCCTTAAGCATTTT+AGG - chr2_4:7334135-7334154 Msa0312320:intron 25.0%
!! CATTTTCCTTAAGCATTTTA+GGG - chr2_4:7334136-7334155 Msa0312320:intron 25.0%
!! TGCTGATGGAAAAATTTTAT+AGG - chr2_4:7334167-7334186 Msa0312320:intron 25.0%
!! GCTGATGGAAAAATTTTATA+GGG - chr2_4:7334168-7334187 Msa0312320:intron 25.0%
!! ATGCTGTTGGAAAATTTTAT+AGG - chr2_4:7334198-7334217 Msa0312320:intron 25.0%
!! TGCTGTTGGAAAATTTTATA+GGG - chr2_4:7334199-7334218 Msa0312320:intron 25.0%
! AAGGTAATGCTTCATATAAA+AGG - chr2_4:7334422-7334441 Msa0312320:CDS 25.0%
! AGGTAATGCTTCATATAAAA+GGG - chr2_4:7334423-7334442 Msa0312320:CDS 25.0%
! ATTTATATTGAAGGTCATGT+AGG + chr2_4:7334653-7334672 None:intergenic 25.0%
!!! ATTTGCTTTTAATAATTCCG+AGG - chr2_4:7334790-7334809 Msa0312320:CDS 25.0%
! TCAAAAATTAAAGTATGCCT+CGG + chr2_4:7334810-7334829 None:intergenic 25.0%
!!! AGTTGTAAATATTGATTCTG+AGG - chr2_4:7335139-7335158 Msa0312320:CDS 25.0%
! TGTTAATAAATGAGGTCTTT+AGG - chr2_4:7335388-7335407 Msa0312320:CDS 25.0%
!! ATAAGTTTAGGATTAAAACG+GGG + chr2_4:7335645-7335664 None:intergenic 25.0%
!! GATAAGTTTAGGATTAAAAC+GGG + chr2_4:7335646-7335665 None:intergenic 25.0%
! CTCTTGTAACTTAATCTTAA+AGG - chr2_4:7336834-7336853 Msa0312320:CDS 25.0%
!!! TAAGCACTTATTCTAAGATT+GGG + chr2_4:7337040-7337059 None:intergenic 25.0%
!!! ATAAGCACTTATTCTAAGAT+TGG + chr2_4:7337041-7337060 None:intergenic 25.0%
! TAGAATAAGTGCTTATGAAA+TGG - chr2_4:7337045-7337064 Msa0312320:intron 25.0%
! CAACTTGACAAAAAAAAAAG+TGG + chr2_4:7337106-7337125 None:intergenic 25.0%
! ATTAGAACAAACAAAGCAAA+AGG + chr2_4:7337516-7337535 None:intergenic 25.0%
!! TTTTTAATCCTATGCTTACT+AGG + chr2_4:7337609-7337628 None:intergenic 25.0%
!!! CTTAGAGATATTACTTTTGT+AGG - chr2_4:7337941-7337960 Msa0312320:intron 25.0%
! AAGAACAAAAGTAGAACAAA+TGG + chr2_4:7338505-7338524 None:intergenic 25.0%
! AAAAAAAATTATTAGCCGAG+TGG - chr2_4:7338660-7338679 Msa0312320:intron 25.0%
! AAGAATGTGTTGAATTATAC+GGG + chr2_4:7339068-7339087 None:intergenic 25.0%
! GAAAAAGATGATTGTGAAAA+TGG - chr2_4:7339174-7339193 Msa0312320:intron 25.0%
! AAAAATCATGACTGTGAAAA+TGG - chr2_4:7339438-7339457 Msa0312320:intron 25.0%
! AAGCTTAGTTTCGTTATTAT+CGG + chr2_4:7339619-7339638 None:intergenic 25.0%
! AAAAAACATGGTTGTGAAAA+TGG - chr2_4:7339714-7339733 Msa0312320:intron 25.0%
!!! AGTTTTGAATGGAGATAATT+TGG - chr2_4:7340496-7340515 Msa0312320:intron 25.0%
!!! GATTCTATTTTTGAAACTGA+AGG - chr2_4:7340779-7340798 Msa0312320:intron 25.0%
! TTGTTATGGTCAAAATATGA+GGG - chr2_4:7341010-7341029 Msa0312320:intron 25.0%
! AAATTATTTGATAGGACTTG+AGG + chr2_4:7341131-7341150 None:intergenic 25.0%
!!! CTTCTAACCATTTTAGAATT+AGG - chr2_4:7341465-7341484 Msa0312320:intron 25.0%
!! CATATAGCCTAATTCTAAAA+TGG + chr2_4:7341475-7341494 None:intergenic 25.0%
! AATGAAATGTGTGTGAAAAA+TGG - chr2_4:7341727-7341746 Msa0312320:intron 25.0%
!! TTAAGTTGTTTAATTGTACC+TGG + chr2_4:7341815-7341834 None:intergenic 25.0%
! CTCATTATTAACTTAGTGTA+TGG - chr2_4:7342146-7342165 Msa0312320:intron 25.0%
! TATTAACTTAGTGTATGGTA+TGG - chr2_4:7342151-7342170 Msa0312320:intron 25.0%
!! AACAAAGTAGTAGTGATTTT+AGG - chr2_4:7343006-7343025 Msa0312320:intron 25.0%
!!! TGATTTTAGGTTTAACGAAT+AGG - chr2_4:7343019-7343038 Msa0312320:intron 25.0%
!!! TTTTTGGTGTAGTTTATTGA+AGG - chr2_4:7343086-7343105 Msa0312320:five_prime_UTR 25.0%
! GGATAAGTTTATTATCAAAG+TGG - chr2_4:7343215-7343234 Msa0312320:five_prime_UTR 25.0%
! TACACTTTGATGTAAATTGT+AGG - chr2_4:7343272-7343291 Msa0312320:five_prime_UTR 25.0%
!!! TAGTTTTTGTTGGTTTAAGG+TGG + chr2_4:7332085-7332104 None:intergenic 30.0%
!!! TGGTAGTTTTTGTTGGTTTA+AGG + chr2_4:7332088-7332107 None:intergenic 30.0%
TTGGTTAATACATGATGGTT+AGG + chr2_4:7332625-7332644 None:intergenic 30.0%
! GTAAGAGAGCATAAAAGAAT+AGG - chr2_4:7332784-7332803 Msa0312320:intron 30.0%
CTACACATGGATCAATTTAA+TGG - chr2_4:7333427-7333446 Msa0312320:intron 30.0%
!! AGACTTTAACTTTTCTCTGT+AGG - chr2_4:7333555-7333574 Msa0312320:intron 30.0%
!! GACTTTAACTTTTCTCTGTA+GGG - chr2_4:7333556-7333575 Msa0312320:intron 30.0%
!! GCAATGTCAATGGATTATAT+CGG + chr2_4:7333683-7333702 None:intergenic 30.0%
AAACAAATCTTTACACGTTC+TGG - chr2_4:7333723-7333742 Msa0312320:intron 30.0%
!! GAACGTGTAAAGATTTGTTA+AGG + chr2_4:7333800-7333819 None:intergenic 30.0%
TAACAAATCTTTACACGTTC+TGG - chr2_4:7333800-7333819 Msa0312320:intron 30.0%
CATAACATATATAGAGGTTG+AGG - chr2_4:7333852-7333871 Msa0312320:intron 30.0%
TTTAGTCCCTAAAATGCTTA+AGG + chr2_4:7334145-7334164 None:intergenic 30.0%
TCACTAAAGTTGTCATGAAA+TGG + chr2_4:7334479-7334498 None:intergenic 30.0%
AAAACAATGGAGAGAGAAAA+AGG - chr2_4:7334530-7334549 Msa0312320:CDS 30.0%
GTACAAAAGTTGTCTCAAAA+TGG - chr2_4:7334597-7334616 Msa0312320:CDS 30.0%
GACAATGCATAAAATATGCA+AGG - chr2_4:7335082-7335101 Msa0312320:CDS 30.0%
!!! TTACAACTTTTTTTTGGTGG+TGG + chr2_4:7335127-7335146 None:intergenic 30.0%
!!! ACAACTATTTTTTTTGGTGG+TGG + chr2_4:7335177-7335196 None:intergenic 30.0%
!!! TTTTTTGCATAATCATCACG+CGG - chr2_4:7335551-7335570 Msa0312320:CDS 30.0%
TAACTTTCTCATGTATCCTA+AGG + chr2_4:7336000-7336019 None:intergenic 30.0%
TTAATATTTACTCCCTTGTC+CGG - chr2_4:7336562-7336581 Msa0312320:intron 30.0%
AAACTAATGGTTAGGAAGTT+GGG + chr2_4:7336604-7336623 None:intergenic 30.0%
TAAACTAATGGTTAGGAAGT+TGG + chr2_4:7336605-7336624 None:intergenic 30.0%
CACGTATCTTAACATATGTT+TGG + chr2_4:7336686-7336705 None:intergenic 30.0%
AAGATTAAGTTACAAGAGCA+AGG + chr2_4:7336832-7336851 None:intergenic 30.0%
ACATTAGTGTATATGACACA+TGG + chr2_4:7337382-7337401 None:intergenic 30.0%
TGTGTCATATACACTAATGT+CGG - chr2_4:7337382-7337401 Msa0312320:intron 30.0%
TGTGACATATTTCAACTAAG+TGG + chr2_4:7337442-7337461 None:intergenic 30.0%
AGATAAATCCTAGTAAGCAT+AGG - chr2_4:7337598-7337617 Msa0312320:intron 30.0%
GAATGACAAGAAAACACAAA+AGG + chr2_4:7337674-7337693 None:intergenic 30.0%
AGTATGAAGATTTGCAACAA+CGG - chr2_4:7337976-7337995 Msa0312320:intron 30.0%
AAATGTACTAACAAGTAACC+AGG + chr2_4:7338055-7338074 None:intergenic 30.0%
!!! ATTTTTTGTATGAGGAGCTT+AGG - chr2_4:7338332-7338351 Msa0312320:intron 30.0%
!! ATTCAATTGGGTTAGTTTCA+TGG - chr2_4:7338401-7338420 Msa0312320:intron 30.0%
TCAAACTTAGTATTTGTGAG+TGG - chr2_4:7338436-7338455 Msa0312320:intron 30.0%
GGTGGACATGATAAAAATTT+AGG - chr2_4:7338542-7338561 Msa0312320:intron 30.0%
TAAAACTAACTTACACCACT+CGG + chr2_4:7338678-7338697 None:intergenic 30.0%
! AATGAGTTTTCATTGGAAGT+CGG + chr2_4:7338703-7338722 None:intergenic 30.0%
ATTGAAGAGACCTAAAACAA+AGG - chr2_4:7338859-7338878 Msa0312320:intron 30.0%
GTAAAAGGATTTACAAGTGT+TGG + chr2_4:7338928-7338947 None:intergenic 30.0%
ACATTTACCTTCACAGAAAT+TGG - chr2_4:7339215-7339234 Msa0312320:intron 30.0%
TTTAACTCTCTCCAATTTCT+GGG + chr2_4:7339229-7339248 None:intergenic 30.0%
ATTTAACTCTCTCCAATTTC+TGG + chr2_4:7339230-7339249 None:intergenic 30.0%
TTGCACTAAAGAAACATCAA+AGG - chr2_4:7339791-7339810 Msa0312320:intron 30.0%
ACTAAAGAAACATCAAAGGA+TGG - chr2_4:7339795-7339814 Msa0312320:intron 30.0%
!!! ATCTTTTTTCTCATTCTGCT+CGG + chr2_4:7339979-7339998 None:intergenic 30.0%
TTTAACTCTCTCCAATTTCT+GGG + chr2_4:7339229-7339248 None:intergenic 30.0%
!! TTTTAACTCTCTCCAATTTC+TGG + chr2_4:7340046-7340065 None:intergenic 30.0%
TTCCACTAAAGAAACATCAA+AGG - chr2_4:7340067-7340086 Msa0312320:intron 30.0%
ATCCTTTGATGTTTCTTTAG+TGG + chr2_4:7339796-7339815 None:intergenic 30.0%
ACTAAAGAAACATCAAAGGA+TGG - chr2_4:7339795-7339814 Msa0312320:intron 30.0%
TGGCTTAGTTTCATTATCAT+CGG + chr2_4:7340447-7340466 None:intergenic 30.0%
TTAGTAGAATGTGAAACTTC+TGG + chr2_4:7340467-7340486 None:intergenic 30.0%
AAGTAGGATGTCGTAAAAAA+CGG - chr2_4:7340540-7340559 Msa0312320:intron 30.0%
GGATTGTGGAAGAAATATTA+TGG - chr2_4:7340583-7340602 Msa0312320:intron 30.0%
TGGAAGAAATATTATGGAAG+TGG - chr2_4:7340589-7340608 Msa0312320:intron 30.0%
TCTAACAAAGTAACCATCAT+AGG + chr2_4:7340960-7340979 None:intergenic 30.0%
ATAGTTGTTTGATGTTCTCT+AGG - chr2_4:7340981-7341000 Msa0312320:intron 30.0%
TAGTTGTTTGATGTTCTCTA+GGG - chr2_4:7340982-7341001 Msa0312320:intron 30.0%
! CTTGTTATGGTCAAAATATG+AGG - chr2_4:7341009-7341028 Msa0312320:intron 30.0%
!! TTTTCTTTGAAGACTACTCA+CGG + chr2_4:7341162-7341181 None:intergenic 30.0%
AAATTATTTGATAGGACTCG+AGG + chr2_4:7341195-7341214 None:intergenic 30.0%
! TCTCACTTATGTTTTACTCA+CGG + chr2_4:7341226-7341245 None:intergenic 30.0%
TAGAATTAGGCTATATGACT+TGG - chr2_4:7341478-7341497 Msa0312320:intron 30.0%
ATACAGCTTAAAAGAGTTGT+TGG - chr2_4:7341766-7341785 Msa0312320:intron 30.0%
TTGTTTAATTGTACCTGGTT+GGG + chr2_4:7341810-7341829 None:intergenic 30.0%
AACTTAACAAGTTAAAGGAC+TGG - chr2_4:7341828-7341847 Msa0312320:intron 30.0%
AAGAAGTTCAAGAATAAGGT+CGG + chr2_4:7341953-7341972 None:intergenic 30.0%
GAGAAAGAAGTTCAAGAATA+AGG + chr2_4:7341957-7341976 None:intergenic 30.0%
CTCTTTGACGAAAAAAACAT+AGG + chr2_4:7342080-7342099 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - chr2_4:7342222-7342241 Msa0312320:intron 30.0%
ACAAAAGAGATCAGTGAATA+TGG + chr2_4:7342271-7342290 None:intergenic 30.0%
ATTCTACATTGGCAACTTAA+TGG + chr2_4:7342352-7342371 None:intergenic 30.0%
CAAAGATGCAAATTCTACAT+TGG + chr2_4:7342363-7342382 None:intergenic 30.0%
CAACAGAAAAATCATTGCAA+AGG - chr2_4:7342802-7342821 Msa0312320:CDS 30.0%
AGCTTTCTTCATGACATTTA+AGG + chr2_4:7342906-7342925 None:intergenic 30.0%
! AATGTCATGAAGAAAGCTTT+TGG - chr2_4:7342908-7342927 Msa0312320:intron 30.0%
TTTGGTAGACAGAAAAAAGT+CGG - chr2_4:7342926-7342945 Msa0312320:intron 30.0%
! TACAAAGATTTTCTCCGTTT+TGG - chr2_4:7343055-7343074 Msa0312320:intron 30.0%
CAAAAAACACCTAACCAAAA+CGG + chr2_4:7343072-7343091 None:intergenic 30.0%
! CTAACTCAAGTTCATTTTGT+TGG + chr2_4:7343128-7343147 None:intergenic 30.0%
!!! TTTGTTTTTGCTAGCATCAA+AGG - chr2_4:7343246-7343265 Msa0312320:five_prime_UTR 30.0%
!!! TTGTTTTTGCTAGCATCAAA+GGG - chr2_4:7343247-7343266 Msa0312320:five_prime_UTR 30.0%
TTTGATGTAAATTGTAGGCA+AGG - chr2_4:7343277-7343296 Msa0312320:five_prime_UTR 30.0%
!!! GGTTTAAGGTGGTTTTAAAG+AGG + chr2_4:7332074-7332093 None:intergenic 35.0%
CTTAATCCAACGATCTAGAT+TGG + chr2_4:7332966-7332985 None:intergenic 35.0%
!!! ATATTTTTGGTCGTTGGATC+AGG + chr2_4:7333053-7333072 None:intergenic 35.0%
GACAATTTACAACCCACAAA+AGG - chr2_4:7333513-7333532 Msa0312320:intron 35.0%
AATTGTGTCAGCAATGTCAA+TGG + chr2_4:7333693-7333712 None:intergenic 35.0%
TGAGCTTAACTCAATTGGTT+AGG - chr2_4:7333746-7333765 Msa0312320:intron 35.0%
TGCTTAAGGAAAATGTCACA+GGG + chr2_4:7334131-7334150 None:intergenic 35.0%
ATGCTTAAGGAAAATGTCAC+AGG + chr2_4:7334132-7334151 None:intergenic 35.0%
TTAGGGACTAAAAATGCTGA+TGG - chr2_4:7334153-7334172 Msa0312320:intron 35.0%
ATAGGGACTAAAAATGCTGT+TGG - chr2_4:7334185-7334204 Msa0312320:intron 35.0%
TTGCGGGCAGATTAAAAATT+GGG + chr2_4:7334333-7334352 None:intergenic 35.0%
TTTGCGGGCAGATTAAAAAT+TGG + chr2_4:7334334-7334353 None:intergenic 35.0%
TATCTCTCATACTCACATGA+TGG + chr2_4:7334572-7334591 None:intergenic 35.0%
CATAAAATATGCAAGGTCTG+AGG - chr2_4:7335089-7335108 Msa0312320:CDS 35.0%
!!! TATTTTTTTTGGTGGTGGCT+GGG + chr2_4:7335172-7335191 None:intergenic 35.0%
TTACCAAACCAAAAGGTCTT+CGG - chr2_4:7335963-7335982 Msa0312320:CDS 35.0%
!! CGGTTTGTTCATTCTTGTTT+TGG + chr2_4:7336032-7336051 None:intergenic 35.0%
CTAAATTCAAATCCGGACAA+GGG + chr2_4:7336577-7336596 None:intergenic 35.0%
AACTAATGGTTAGGAAGTTG+GGG + chr2_4:7336603-7336622 None:intergenic 35.0%
TTCTTATCCTACACACCAAA+AGG - chr2_4:7336731-7336750 Msa0312320:intron 35.0%
TCTTATCCTACACACCAAAA+GGG - chr2_4:7336732-7336751 Msa0312320:intron 35.0%
GTCCAATGAAAATCCATCAT+TGG - chr2_4:7336798-7336817 Msa0312320:intron 35.0%
!!! GTCCAATGATGGATTTTCAT+TGG + chr2_4:7336803-7336822 None:intergenic 35.0%
TTTCTTAACATGTGCCCTTA+GGG + chr2_4:7336876-7336895 None:intergenic 35.0%
ATTTCTTAACATGTGCCCTT+AGG + chr2_4:7336877-7336896 None:intergenic 35.0%
ACACTATAAGTGTGAAGAAG+TGG - chr2_4:7337144-7337163 Msa0312320:intron 35.0%
TGTGAAGAAGTGGAAAATCT+AGG - chr2_4:7337154-7337173 Msa0312320:intron 35.0%
GTGAAGAAGTGGAAAATCTA+GGG - chr2_4:7337155-7337174 Msa0312320:intron 35.0%
ATTTGCAACAACGGTATTCT+GGG - chr2_4:7337985-7338004 Msa0312320:intron 35.0%
! TTTTTAATCCAGTAGCCTAG+TGG - chr2_4:7338088-7338107 Msa0312320:intron 35.0%
!! ACCCTTTGAGGTGAATAATT+GGG - chr2_4:7338121-7338140 Msa0312320:intron 35.0%
TGTTATGTCTCATTGCATGA+TGG - chr2_4:7338290-7338309 Msa0312320:intron 35.0%
ATGGTAAAATTGCAATGCCA+GGG - chr2_4:7338309-7338328 Msa0312320:intron 35.0%
! ATTTTTATCATGTCCACCAG+TGG + chr2_4:7338540-7338559 None:intergenic 35.0%
GACTTCCAATGAAAACTCAT+TGG - chr2_4:7338702-7338721 Msa0312320:intron 35.0%
GGTTACAAAATAGGCTTATG+TGG + chr2_4:7338732-7338751 None:intergenic 35.0%
ATGAGAAGCGGTTACAAAAT+AGG + chr2_4:7338741-7338760 None:intergenic 35.0%
!!! ACAGTTCTGGTTTTTGAGTT+TGG + chr2_4:7338895-7338914 None:intergenic 35.0%
AATGTGTTGAATTATACGGG+TGG + chr2_4:7339065-7339084 None:intergenic 35.0%
TGTGGTTACTTGTATGTTTC+AGG - chr2_4:7339106-7339125 Msa0312320:intron 35.0%
ATCAAAGATTGAAGACCTTG+AGG - chr2_4:7339137-7339156 Msa0312320:intron 35.0%
TCAGTAGATTGTGAAACTTC+AGG + chr2_4:7339363-7339382 None:intergenic 35.0%
ACATTTACCTTCCCAGAAAT+TGG - chr2_4:7339479-7339498 Msa0312320:intron 35.0%
GAGAAGAACGAGAAAAAACA+TGG - chr2_4:7339702-7339721 Msa0312320:intron 35.0%
ACATTTACCATCCCAGAAAT+TGG - chr2_4:7340031-7340050 Msa0312320:intron 35.0%
TCAGTAGATTGTGAAACTTC+AGG + chr2_4:7339363-7339382 None:intergenic 35.0%
ACATTTACCATCCCAGAAAT+TGG - chr2_4:7340031-7340050 Msa0312320:intron 35.0%
TTCAACTCTCACCAATTTCT+GGG + chr2_4:7340321-7340340 None:intergenic 35.0%
ATTCAACTCTCACCAATTTC+TGG + chr2_4:7340322-7340341 None:intergenic 35.0%
TTCCTTTGATGTCTCTTTAG+CGG + chr2_4:7340348-7340367 None:intergenic 35.0%
TCAAAGGAAGGATTATCTGT+CGG - chr2_4:7340359-7340378 Msa0312320:intron 35.0%
AGTTTCACATTCTACTAAGC+AGG - chr2_4:7340469-7340488 Msa0312320:intron 35.0%
!!! AAGCAGGCTAAAGTTTTGAA+TGG - chr2_4:7340485-7340504 Msa0312320:intron 35.0%
AAGAGAAAAAGGAAGGATTG+TGG - chr2_4:7340569-7340588 Msa0312320:intron 35.0%
AATATGAGGGTCCTTAAAAG+AGG - chr2_4:7341023-7341042 Msa0312320:intron 35.0%
TTATTTGATAGGACTTGAGG+TGG + chr2_4:7341128-7341147 None:intergenic 35.0%
! TGAAAAGGGTAACGGTTAAA+AGG + chr2_4:7341348-7341367 None:intergenic 35.0%
! TGTAACGGAATGTGTGAAAA+GGG + chr2_4:7341362-7341381 None:intergenic 35.0%
! TTGTAACGGAATGTGTGAAA+AGG + chr2_4:7341363-7341382 None:intergenic 35.0%
AATGGTTAGAAGTTACACCT+AGG + chr2_4:7341457-7341476 None:intergenic 35.0%
CCAATGTACAAATTCTCAGA+GGG + chr2_4:7341515-7341534 None:intergenic 35.0%
! CCTCTGAGAATTTGTACATT+GGG - chr2_4:7341513-7341532 Msa0312320:intron 35.0%
!!! CTCTAGCCCATTTTAGAATT+AGG + chr2_4:7341611-7341630 None:intergenic 35.0%
!! CTAATTCTAAAATGGGCTAG+AGG - chr2_4:7341609-7341628 Msa0312320:intron 35.0%
TAACTTTGTTCCTACCATGT+TGG - chr2_4:7341675-7341694 Msa0312320:intron 35.0%
TGTTATGTTACCAACATGGT+AGG + chr2_4:7341688-7341707 None:intergenic 35.0%
TGTCTGTTATGTTACCAACA+TGG + chr2_4:7341692-7341711 None:intergenic 35.0%
GTTGTTTAATTGTACCTGGT+TGG + chr2_4:7341811-7341830 None:intergenic 35.0%
TTTCTCGAAGAACTTACGTA+AGG - chr2_4:7341971-7341990 Msa0312320:intron 35.0%
TTCTCGAAGAACTTACGTAA+GGG - chr2_4:7341972-7341991 Msa0312320:intron 35.0%
! TGAGCTTAACTTAGTTGGTA+AGG - chr2_4:7342200-7342219 Msa0312320:intron 35.0%
CATAATATATGCAAGGTCTG+AGG - chr2_4:7342229-7342248 Msa0312320:intron 35.0%
TCAGTGAATATGGTTGTTTG+AGG + chr2_4:7342261-7342280 None:intergenic 35.0%
!! TTGGTAAATGGACTAATGGT+AGG + chr2_4:7342324-7342343 None:intergenic 35.0%
TTAATGGTGTGCTTGGTAAA+TGG + chr2_4:7342336-7342355 None:intergenic 35.0%
! CAATGAAGAGTATGCATACA+AGG - chr2_4:7342410-7342429 Msa0312320:intron 35.0%
! CCTCTTTTCTGTTGTCAAAT+AGG + chr2_4:7342467-7342486 None:intergenic 35.0%
CCTATTTGACAACAGAAAAG+AGG - chr2_4:7342464-7342483 Msa0312320:intron 35.0%
! CTCTGGTTGATTCAATTGTT+CGG + chr2_4:7342553-7342572 None:intergenic 35.0%
CATAGTCGCCAAAAAAATGA+GGG - chr2_4:7342667-7342686 Msa0312320:intron 35.0%
!!! GAAACTCTCCCTCATTTTTT+TGG + chr2_4:7342678-7342697 None:intergenic 35.0%
AAAAATGAGGGAGAGTTTCA+AGG - chr2_4:7342679-7342698 Msa0312320:intron 35.0%
AAAATGAGGGAGAGTTTCAA+GGG - chr2_4:7342680-7342699 Msa0312320:intron 35.0%
GGTAATTTCGTAGACTCATT+AGG + chr2_4:7342737-7342756 None:intergenic 35.0%
ACATGAAGATTATGATGCAC+TGG + chr2_4:7342758-7342777 None:intergenic 35.0%
AAAATCATTGCAAAGGCTGT+TGG - chr2_4:7342809-7342828 Msa0312320:CDS 35.0%
! TGTGAAGAATCGGCTTTAAT+GGG + chr2_4:7342872-7342891 None:intergenic 35.0%
! ATGTGAAGAATCGGCTTTAA+TGG + chr2_4:7342873-7342892 None:intergenic 35.0%
TTCCACAGAATGTGAAGAAT+CGG + chr2_4:7342882-7342901 None:intergenic 35.0%
!!! AGATTTTCTCCGTTTTGGTT+AGG - chr2_4:7343060-7343079 Msa0312320:intron 35.0%
!!! CGTTTTGGTTAGGTGTTTTT+TGG - chr2_4:7343070-7343089 Msa0312320:five_prime_UTR 35.0%
TTGGTGTAGTTTATTGAAGG+AGG - chr2_4:7343089-7343108 Msa0312320:five_prime_UTR 35.0%
TGTAGTTTATTGAAGGAGGA+AGG - chr2_4:7343093-7343112 Msa0312320:five_prime_UTR 35.0%
AATGAACTTGAGTTAGATGC+AGG - chr2_4:7343132-7343151 Msa0312320:five_prime_UTR 35.0%
!!! GGCAAGGTTTTTTTTAGCAA+TGG - chr2_4:7343293-7343312 Msa0312320:five_prime_UTR 35.0%
GGTGAGGGATTCTATTTGTA+AGG + chr2_4:7331947-7331966 None:intergenic 40.0%
ATAGAGTAAGCGTGAGAAGA+GGG + chr2_4:7331970-7331989 None:intergenic 40.0%
AATAGAGTAAGCGTGAGAAG+AGG + chr2_4:7331971-7331990 None:intergenic 40.0%
! TCGGGAATGGTAGTTTTTGT+TGG + chr2_4:7332095-7332114 None:intergenic 40.0%
! TATTTTCCGGCGAGAATTTC+GGG + chr2_4:7332113-7332132 None:intergenic 40.0%
! CTATTTTCCGGCGAGAATTT+CGG + chr2_4:7332114-7332133 None:intergenic 40.0%
! ACGTGGGTATGTCTATTTTC+CGG + chr2_4:7332126-7332145 None:intergenic 40.0%
AAAATAAGGCTTACCGGTGT+CGG + chr2_4:7332165-7332184 None:intergenic 40.0%
AAATCAACCACCATCTTCTC+CGG + chr2_4:7332211-7332230 None:intergenic 40.0%
ATAGTACCTCAGGGGTAAAA+GGG + chr2_4:7332457-7332476 None:intergenic 40.0%
AATAGTACCTCAGGGGTAAA+AGG + chr2_4:7332458-7332477 None:intergenic 40.0%
GTTTGACCAATCTAGATCGT+TGG - chr2_4:7332957-7332976 Msa0312320:intron 40.0%
! TACACAAACCTTTGAGAGCA+TGG - chr2_4:7333087-7333106 Msa0312320:intron 40.0%
ATAGGATTCCATGCTCTCAA+AGG + chr2_4:7333098-7333117 None:intergenic 40.0%
TCTGGTGAGCTTAACTCAAT+TGG - chr2_4:7333741-7333760 Msa0312320:intron 40.0%
TCTGGTGAGCTTAACTCAAT+TGG - chr2_4:7333741-7333760 Msa0312320:intron 40.0%
AAAAATTGCGCAGAAGCTTC+CGG + chr2_4:7334360-7334379 None:intergenic 40.0%
!!! ACTTTTTTTTGGTGGTGGCT+GGG + chr2_4:7335122-7335141 None:intergenic 40.0%
!!! AACTTTTTTTTGGTGGTGGC+TGG + chr2_4:7335123-7335142 None:intergenic 40.0%
!!! ATTTTTTTTGGTGGTGGCTG+GGG + chr2_4:7335171-7335190 None:intergenic 40.0%
!!! CTATTTTTTTTGGTGGTGGC+TGG + chr2_4:7335173-7335192 None:intergenic 40.0%
! AACTTGTACCGAAGACCTTT+TGG + chr2_4:7335974-7335993 None:intergenic 40.0%
AAAAGGTCTTCGGTACAAGT+TGG - chr2_4:7335973-7335992 Msa0312320:CDS 40.0%
AAAGGTCTTCGGTACAAGTT+GGG - chr2_4:7335974-7335993 Msa0312320:CDS 40.0%
CCTAAATTCAAATCCGGACA+AGG + chr2_4:7336578-7336597 None:intergenic 40.0%
CCTTGTCCGGATTTGAATTT+AGG - chr2_4:7336575-7336594 Msa0312320:intron 40.0%
ACTAATGGTTAGGAAGTTGG+GGG + chr2_4:7336602-7336621 None:intergenic 40.0%
!! TAGTGTTAACTTGTGCCCTA+AGG - chr2_4:7336858-7336877 Msa0312320:CDS 40.0%
!! AGTGTTAACTTGTGCCCTAA+GGG - chr2_4:7336859-7336878 Msa0312320:CDS 40.0%
ACTTCTAAACTTGTGCCTTG+AGG - chr2_4:7336998-7337017 Msa0312320:intron 40.0%
CTTCTAAACTTGTGCCTTGA+GGG - chr2_4:7336999-7337018 Msa0312320:intron 40.0%
!! AATGTTAACTTGTGCCCTCA+AGG + chr2_4:7337016-7337035 None:intergenic 40.0%
AGATCCATGGACGTTGATAT+GGG + chr2_4:7337195-7337214 None:intergenic 40.0%
AAGATCCATGGACGTTGATA+TGG + chr2_4:7337196-7337215 None:intergenic 40.0%
TACGTCCTGTAATTGCAACT+CGG + chr2_4:7337224-7337243 None:intergenic 40.0%
!!! ATTTTAGAGCGACGATTCAG+TGG - chr2_4:7337353-7337372 Msa0312320:intron 40.0%
TGTGAATAACAATTGCCAGG+TGG + chr2_4:7337411-7337430 None:intergenic 40.0%
! ACCTGGCAATTGTTATTCAC+AGG - chr2_4:7337410-7337429 Msa0312320:intron 40.0%
ACCTGTGAATAACAATTGCC+AGG + chr2_4:7337414-7337433 None:intergenic 40.0%
CATGTATGATCACTTGCACA+TGG - chr2_4:7337471-7337490 Msa0312320:intron 40.0%
TCACTTGCACATGGTCAATT+AGG - chr2_4:7337480-7337499 Msa0312320:intron 40.0%
TGGTAATCAGAAATGGCACA+TGG - chr2_4:7337572-7337591 Msa0312320:intron 40.0%
!!! TTGTTTCCTAGTTTTGGCGT+AGG - chr2_4:7337823-7337842 Msa0312320:intron 40.0%
TCATATCCTACGCCAAAACT+AGG + chr2_4:7337832-7337851 None:intergenic 40.0%
GATTTGCAACAACGGTATTC+TGG - chr2_4:7337984-7338003 Msa0312320:intron 40.0%
!!! ATTTTTAGCCACTAGGCTAC+TGG + chr2_4:7338099-7338118 None:intergenic 40.0%
CAATTATTCACCTCAAAGGG+TGG + chr2_4:7338122-7338141 None:intergenic 40.0%
!! CACCCTTTGAGGTGAATAAT+TGG - chr2_4:7338120-7338139 Msa0312320:intron 40.0%
CCCCAATTATTCACCTCAAA+GGG + chr2_4:7338125-7338144 None:intergenic 40.0%
!! CCCTTTGAGGTGAATAATTG+GGG - chr2_4:7338122-7338141 Msa0312320:intron 40.0%
TCCCCAATTATTCACCTCAA+AGG + chr2_4:7338126-7338145 None:intergenic 40.0%
GTGAATAATTGGGGAATCTG+AGG - chr2_4:7338131-7338150 Msa0312320:intron 40.0%
TAGAAACTTGCGATATGCAG+GGG + chr2_4:7338168-7338187 None:intergenic 40.0%
GTAGAAACTTGCGATATGCA+GGG + chr2_4:7338169-7338188 None:intergenic 40.0%
GATGGTAAAATTGCAATGCC+AGG - chr2_4:7338308-7338327 Msa0312320:intron 40.0%
!!! TGCCAGGGATTTTTTGTATG+AGG - chr2_4:7338324-7338343 Msa0312320:intron 40.0%
CTCCTCATACAAAAAATCCC+TGG + chr2_4:7338329-7338348 None:intergenic 40.0%
! GCGATCCAATGAGTTTTCAT+TGG + chr2_4:7338710-7338729 None:intergenic 40.0%
! TGGTTTAGAGTTCACAGTTC+TGG + chr2_4:7338908-7338927 None:intergenic 40.0%
TGCACACTACACACTGTAAA+AGG + chr2_4:7338943-7338962 None:intergenic 40.0%
ATCTTGTGTCCGTTTCATCA+CGG - chr2_4:7338973-7338992 Msa0312320:intron 40.0%
CTTATCCTACCGTGATGAAA+CGG + chr2_4:7338985-7339004 None:intergenic 40.0%
TGTGAAGGTAAATGTGATGC+TGG + chr2_4:7339210-7339229 None:intergenic 40.0%
ACTCTCTCCAATTTCTGTGA+AGG + chr2_4:7339225-7339244 None:intergenic 40.0%
GAGAGTTAAATCTTCCACCA+AGG - chr2_4:7339239-7339258 Msa0312320:intron 40.0%
GTTAAATCTTCCACCAAGGA+AGG - chr2_4:7339243-7339262 Msa0312320:intron 40.0%
CGTTTCATGAGTGAAACTTC+CGG + chr2_4:7339277-7339296 None:intergenic 40.0%
GAAGTTTCACTCATGAAACG+AGG - chr2_4:7339277-7339296 Msa0312320:intron 40.0%
AGGCTTAGTCTCGTTATCAT+CGG + chr2_4:7339343-7339362 None:intergenic 40.0%
AGTTTCACAATCTACTGAGC+AGG - chr2_4:7339365-7339384 Msa0312320:intron 40.0%
ATCAAAGCTTGAAGTCCTCA+AGG - chr2_4:7339401-7339420 Msa0312320:intron 40.0%
TATCCTTCTTCTCAACCTTG+AGG + chr2_4:7339419-7339438 None:intergenic 40.0%
TGGGAAGGTAAATGTGATAC+GGG + chr2_4:7339474-7339493 None:intergenic 40.0%
CTGGGAAGGTAAATGTGATA+CGG + chr2_4:7339475-7339494 None:intergenic 40.0%
GAGAGTTAAATCTTCCACCA+AGG - chr2_4:7339239-7339258 Msa0312320:intron 40.0%
CATTTCGTGAGTGAAACTTC+CGG + chr2_4:7339553-7339572 None:intergenic 40.0%
GAAGTTTCACTCACGAAATG+AGG - chr2_4:7339553-7339572 Msa0312320:intron 40.0%
GTTTCGTTATTATCGGCAGA+TGG + chr2_4:7339612-7339631 None:intergenic 40.0%
! AGTTTTGCAATCTACTGAGC+AGG - chr2_4:7339641-7339660 Msa0312320:intron 40.0%
! TGCGAAGGTACATGTGATAT+GGG + chr2_4:7339750-7339769 None:intergenic 40.0%
ACATGTACCTTCGCAGAAAT+TGG - chr2_4:7339755-7339774 Msa0312320:intron 40.0%
! CGTTTTGTGAGTGAAACTTC+CGG + chr2_4:7339829-7339848 None:intergenic 40.0%
GAAGTTTCACTCACAAAACG+AGG - chr2_4:7339829-7339848 Msa0312320:intron 40.0%
AGGCTTAGTCTCGTTATCAT+CGG + chr2_4:7339343-7339362 None:intergenic 40.0%
TCGGTAGATTGCAAAACTTC+AGG + chr2_4:7339915-7339934 None:intergenic 40.0%
ATCAAAGCTTGAAGTCCTCA+AGG - chr2_4:7339401-7339420 Msa0312320:intron 40.0%
TGGGATGGTAAATGTGATAC+TGG + chr2_4:7340026-7340045 None:intergenic 40.0%
TGTTTCGTGTGTGAAACTTC+CGG + chr2_4:7340105-7340124 None:intergenic 40.0%
GAAGTTTCACACACGAAACA+AGG - chr2_4:7340105-7340124 Msa0312320:intron 40.0%
AGGCTTAGTCTCGTTATCAT+CGG + chr2_4:7339343-7339362 None:intergenic 40.0%
AGTTTCACAATCTACTGAGC+AGG - chr2_4:7339365-7339384 Msa0312320:intron 40.0%
ACCAAAGCTTGAATTCCTCA+TGG - chr2_4:7340229-7340248 Msa0312320:intron 40.0%
TCCATGAGGAATTCAAGCTT+TGG + chr2_4:7340233-7340252 None:intergenic 40.0%
TCTCATTCTTCTCATCCATG+AGG + chr2_4:7340247-7340266 None:intergenic 40.0%
TGGGATGGTAAATGTGATAC+TGG + chr2_4:7340026-7340045 None:intergenic 40.0%
TTCCGCTAAAGAGACATCAA+AGG - chr2_4:7340343-7340362 Msa0312320:intron 40.0%
GCTAAAGAGACATCAAAGGA+AGG - chr2_4:7340347-7340366 Msa0312320:intron 40.0%
CAAAGGAAGGATTATCTGTC+GGG - chr2_4:7340360-7340379 Msa0312320:intron 40.0%
GATGTCGTAAAAAACGGAGA+GGG - chr2_4:7340546-7340565 Msa0312320:intron 40.0%
ATTCAGCTGATGTTATGTCC+TGG - chr2_4:7340639-7340658 Msa0312320:intron 40.0%
AGTAGAACTTTCTTTACGCC+AGG + chr2_4:7340660-7340679 None:intergenic 40.0%
GTCTACATGAGCAGAAGATT+TGG + chr2_4:7340702-7340721 None:intergenic 40.0%
! GAACCTGAAAAAGCATAGCA+CGG - chr2_4:7340736-7340755 Msa0312320:intron 40.0%
! CTCCATAAAGCTTTTGATGC+TGG - chr2_4:7340894-7340913 Msa0312320:intron 40.0%
AGCCAGCATCAAAAGCTTTA+TGG + chr2_4:7340899-7340918 None:intergenic 40.0%
TTATTTGATAGGACTCGAGG+TGG + chr2_4:7341192-7341211 None:intergenic 40.0%
AACGGTTAAAAGGACCTATG+TGG + chr2_4:7341338-7341357 None:intergenic 40.0%
GGAATGTGTGAAAAGGGTAA+CGG + chr2_4:7341356-7341375 None:intergenic 40.0%
TACACCTAGGAGATGAGAAA+GGG + chr2_4:7341444-7341463 None:intergenic 40.0%
TTACACCTAGGAGATGAGAA+AGG + chr2_4:7341445-7341464 None:intergenic 40.0%
! CCCTCTGAGAATTTGTACAT+TGG - chr2_4:7341512-7341531 Msa0312320:intron 40.0%
CCCAATGTACAAATTCTCAG+AGG + chr2_4:7341516-7341535 None:intergenic 40.0%
CTGAGAATTTGTACATTGGG+AGG - chr2_4:7341516-7341535 Msa0312320:intron 40.0%
GTACCCATAGAAGATGGAAA+TGG - chr2_4:7341631-7341650 Msa0312320:intron 40.0%
ACGCCATTTCCATCTTCTAT+GGG + chr2_4:7341637-7341656 None:intergenic 40.0%
AAAACCTTAAAGACCCAACC+AGG - chr2_4:7341794-7341813 Msa0312320:intron 40.0%
TGTGGATCATATGGAGAAGT+GGG + chr2_4:7342020-7342039 None:intergenic 40.0%
TTGTGGATCATATGGAGAAG+TGG + chr2_4:7342021-7342040 None:intergenic 40.0%
ACTAGTGGTTGTGGATCATA+TGG + chr2_4:7342029-7342048 None:intergenic 40.0%
CACAACCACTAGTAGACTAA+CGG - chr2_4:7342036-7342055 Msa0312320:intron 40.0%
! ATTTGCCGTTAGTCTACTAG+TGG + chr2_4:7342044-7342063 None:intergenic 40.0%
CCAACTAAGTTAAGCTCACA+AGG + chr2_4:7342198-7342217 None:intergenic 40.0%
CCTTGTGAGCTTAACTTAGT+TGG - chr2_4:7342195-7342214 Msa0312320:intron 40.0%
!! GTGCTTGGTAAATGGACTAA+TGG + chr2_4:7342328-7342347 None:intergenic 40.0%
ACATGGACTTCGACACTATA+AGG - chr2_4:7342513-7342532 Msa0312320:intron 40.0%
GATCTTCGAGTAGAAGACTA+GGG + chr2_4:7342612-7342631 None:intergenic 40.0%
TGATCTTCGAGTAGAAGACT+AGG + chr2_4:7342613-7342632 None:intergenic 40.0%
AAAACTGCTCTCCTTCTAAG+AGG - chr2_4:7342644-7342663 Msa0312320:intron 40.0%
GCATAGTCGCCAAAAAAATG+AGG - chr2_4:7342666-7342685 Msa0312320:intron 40.0%
! AAACCAAGAAGTGTAAGACC+AGG - chr2_4:7342779-7342798 Msa0312320:CDS 40.0%
! GCAATGATTTTTCTGTTGCC+TGG + chr2_4:7342800-7342819 None:intergenic 40.0%
!!! GTCTTTTGACTTGAAGTCAC+AGG + chr2_4:7342953-7342972 None:intergenic 40.0%
! ACTCTTTTCCTTCCTTTCAC+TGG + chr2_4:7342983-7343002 None:intergenic 40.0%
AACTTGAGTTAGATGCAGGA+GGG - chr2_4:7343136-7343155 Msa0312320:five_prime_UTR 40.0%
TAGAGTAAGCGTGAGAAGAG+GGG + chr2_4:7331969-7331988 None:intergenic 45.0%
! AAAACCGGTTTCTCTGACGT+GGG + chr2_4:7332142-7332161 None:intergenic 45.0%
! TTTCTGTCTTTTCCGGTGAC+CGG - chr2_4:7332189-7332208 Msa0312320:three_prime_UTR 45.0%
AATAATCAGGGACGTACACG+TGG - chr2_4:7332309-7332328 Msa0312320:CDS 45.0%
AATGCGTTCTCGAAGTTCAC+CGG + chr2_4:7332423-7332442 None:intergenic 45.0%
AAAATTGCGCAGAAGCTTCC+GGG + chr2_4:7334359-7334378 None:intergenic 45.0%
!!! CTTTTTTTTGGTGGTGGCTG+GGG + chr2_4:7335121-7335140 None:intergenic 45.0%
!! GTACCGAAGACCTTTTGGTT+TGG + chr2_4:7335969-7335988 None:intergenic 45.0%
GGGGGTCCTAAATTCAAATC+CGG + chr2_4:7336584-7336603 None:intergenic 45.0%
!! ACTAGACCCTTTTGGTGTGT+AGG + chr2_4:7336741-7336760 None:intergenic 45.0%
! GCATCTTCACTAGACCCTTT+TGG + chr2_4:7336749-7336768 None:intergenic 45.0%
CATTGGACGCACGTGTAAAT+TGG + chr2_4:7336786-7336805 None:intergenic 45.0%
TGGACGTTGATATGGGGATT+GGG + chr2_4:7337188-7337207 None:intergenic 45.0%
ATGGACGTTGATATGGGGAT+TGG + chr2_4:7337189-7337208 None:intergenic 45.0%
AATCCCCATATCAACGTCCA+TGG - chr2_4:7337188-7337207 Msa0312320:intron 45.0%
GATCCATGGACGTTGATATG+GGG + chr2_4:7337194-7337213 None:intergenic 45.0%
!! AACTCGGTTGGTAAGATCCA+TGG + chr2_4:7337208-7337227 None:intergenic 45.0%
ACCAACCGAGTTGCAATTAC+AGG - chr2_4:7337216-7337235 Msa0312320:intron 45.0%
TCCTGTAATTGCAACTCGGT+TGG + chr2_4:7337220-7337239 None:intergenic 45.0%
CTTGCACATGGTCAATTAGG+TGG - chr2_4:7337483-7337502 Msa0312320:intron 45.0%
!!! AGGGTGGATTTTTAGCCACT+AGG + chr2_4:7338106-7338125 None:intergenic 45.0%
GGCTAAAAATCCACCCTTTG+AGG - chr2_4:7338109-7338128 Msa0312320:intron 45.0%
GGTAGAAACTTGCGATATGC+AGG + chr2_4:7338170-7338189 None:intergenic 45.0%
CTCTGTGAGCATAGCTCAAT+TGG + chr2_4:7338191-7338210 None:intergenic 45.0%
AAGAAAGCTATTGAGCGCTC+TGG - chr2_4:7338376-7338395 Msa0312320:intron 45.0%
!! AGCGCTCTGGAGATTCAATT+GGG - chr2_4:7338389-7338408 Msa0312320:intron 45.0%
AGTGTGTAGTGTGCACTGTA+AGG - chr2_4:7338948-7338967 Msa0312320:intron 45.0%
CTCATGAAACGAGGACAAAC+TGG - chr2_4:7339286-7339305 Msa0312320:intron 45.0%
! AAACTGGTTTCCTGAATCCC+AGG - chr2_4:7339302-7339321 Msa0312320:intron 45.0%
AGTCCTCAAGGTTGAGAAGA+AGG - chr2_4:7339413-7339432 Msa0312320:intron 45.0%
! ACTCTCTCCAATTTCTGGGA+AGG + chr2_4:7339489-7339508 None:intergenic 45.0%
TTCCACCAAGGAAACATCGA+AGG - chr2_4:7339515-7339534 Msa0312320:intron 45.0%
ATCCTTCGATGTTTCCTTGG+TGG + chr2_4:7339520-7339539 None:intergenic 45.0%
ACCAAGGAAACATCGAAGGA+TGG - chr2_4:7339519-7339538 Msa0312320:intron 45.0%
CTCACGAAATGAGGACAAAC+TGG - chr2_4:7339562-7339581 Msa0312320:intron 45.0%
TCTCGTTCTTCTCAGCTTTG+AGG + chr2_4:7339695-7339714 None:intergenic 45.0%
! CTGCGAAGGTACATGTGATA+TGG + chr2_4:7339751-7339770 None:intergenic 45.0%
ACTCTCTCCAATTTCTGCGA+AGG + chr2_4:7339765-7339784 None:intergenic 45.0%
CTCACAAAACGAGGACAAAC+TGG - chr2_4:7339838-7339857 Msa0312320:intron 45.0%
! AGTTTTGCAATCTACCGAGC+AGG - chr2_4:7339917-7339936 Msa0312320:intron 45.0%
TTGCGAAACTTTAGCCTGCT+CGG + chr2_4:7339934-7339953 None:intergenic 45.0%
! ACTCTCTCCAATTTCTGGGA+TGG + chr2_4:7339489-7339508 None:intergenic 45.0%
CACACGAAACAAGGACAAAC+TGG - chr2_4:7340114-7340133 Msa0312320:intron 45.0%
! ACTCTCACCAATTTCTGGGA+TGG + chr2_4:7340317-7340336 None:intergenic 45.0%
GGAGTTTCACACACGAAACA+AGG - chr2_4:7340381-7340400 Msa0312320:intron 45.0%
CACACGAAACAAGGACAAAC+TGG - chr2_4:7340114-7340133 Msa0312320:intron 45.0%
TTATCATCGGAAGATGCAGC+TGG + chr2_4:7340434-7340453 None:intergenic 45.0%
GGATGTCGTAAAAAACGGAG+AGG - chr2_4:7340545-7340564 Msa0312320:intron 45.0%
AACGGAGAGGGAAGAGAAAA+AGG - chr2_4:7340558-7340577 Msa0312320:intron 45.0%
GAGAGGGAAGAGAAAAAGGA+AGG - chr2_4:7340562-7340581 Msa0312320:intron 45.0%
!!! CTTCCGTGCTATGCTTTTTC+AGG + chr2_4:7340742-7340761 None:intergenic 45.0%
!! TCTCTAGGGTGTGCTTGTTA+TGG - chr2_4:7340996-7341015 Msa0312320:intron 45.0%
! AGGGTCCTTAAAAGAGGTGT+AGG - chr2_4:7341029-7341048 Msa0312320:intron 45.0%
! GTCCTTAAAAGAGGTGTAGG+CGG - chr2_4:7341032-7341051 Msa0312320:intron 45.0%
! ATCCGCCTACACCTCTTTTA+AGG + chr2_4:7341037-7341056 None:intergenic 45.0%
ACACCTAGGAGATGAGAAAG+GGG + chr2_4:7341443-7341462 None:intergenic 45.0%
ATTGGGAGGTGAATACCTCT+GGG - chr2_4:7341530-7341549 Msa0312320:intron 45.0%
AATTGATTGTGTAGCCCCAG+AGG + chr2_4:7341548-7341567 None:intergenic 45.0%
!! CTAGAGGTACCCATAGAAGA+TGG - chr2_4:7341625-7341644 Msa0312320:intron 45.0%
CACGCCATTTCCATCTTCTA+TGG + chr2_4:7341638-7341657 None:intergenic 45.0%
ATGGAAATGGCGTGCACATA+CGG - chr2_4:7341644-7341663 Msa0312320:intron 45.0%
TGTACCTGGTTGGGTCTTTA+AGG + chr2_4:7341801-7341820 None:intergenic 45.0%
CGAAGAACTTACGTAAGGGT+CGG - chr2_4:7341976-7341995 Msa0312320:intron 45.0%
GAAGAACTTACGTAAGGGTC+GGG - chr2_4:7341977-7341996 Msa0312320:intron 45.0%
AAGAACTTACGTAAGGGTCG+GGG - chr2_4:7341978-7341997 Msa0312320:intron 45.0%
! CGTTAGTCTACTAGTGGTTG+TGG + chr2_4:7342038-7342057 None:intergenic 45.0%
TGGCAACTTAATGGTGTGCT+TGG + chr2_4:7342343-7342362 None:intergenic 45.0%
GAAAATGATCCAGCAGCACA+TGG - chr2_4:7342496-7342515 Msa0312320:intron 45.0%
CAAGTCTCGGTATAGTTCTC+TGG + chr2_4:7342570-7342589 None:intergenic 45.0%
!! GTAGAAGACTAGGGCATTGT+TGG + chr2_4:7342603-7342622 None:intergenic 45.0%
!! TTGCCTGGTCTTACACTTCT+TGG + chr2_4:7342785-7342804 None:intergenic 45.0%
ATCATTGCAAAGGCTGTTGG+TGG - chr2_4:7342812-7342831 Msa0312320:CDS 45.0%
GACAACTCTGCATCTTCACA+AGG - chr2_4:7342836-7342855 Msa0312320:CDS 45.0%
! AGCCGATTCTTCACATTCTG+TGG - chr2_4:7342877-7342896 Msa0312320:CDS 45.0%
AAGACTGCAACACCAGTGAA+AGG - chr2_4:7342968-7342987 Msa0312320:intron 45.0%
GAACTTGAGTTAGATGCAGG+AGG - chr2_4:7343135-7343154 Msa0312320:five_prime_UTR 45.0%
!!! TTTTTTTTTATTTATATTGA+AGG + chr2_4:7334662-7334681 None:intergenic 5.0%
!!! ATATTTTAAATTATTTTTGT+AGG + chr2_4:7335797-7335816 None:intergenic 5.0%
!! TAATAATAATATAATAATAG+AGG + chr2_4:7337314-7337333 None:intergenic 5.0%
AGAGTAAGCGTGAGAAGAGG+GGG + chr2_4:7331968-7331987 None:intergenic 50.0%
ACCATTCCCGAAATTCTCGC+CGG - chr2_4:7332104-7332123 Msa0312320:three_prime_UTR 50.0%
CATACCCACGTCAGAGAAAC+CGG - chr2_4:7332135-7332154 Msa0312320:three_prime_UTR 50.0%
! GAAAACCGGTTTCTCTGACG+TGG + chr2_4:7332143-7332162 None:intergenic 50.0%
!! AGAAACCGGTTTTCCGACAC+CGG - chr2_4:7332149-7332168 Msa0312320:three_prime_UTR 50.0%
! TCCTATCCCTTTTACCCCTG+AGG - chr2_4:7332448-7332467 Msa0312320:CDS 50.0%
ACCTCAGGGGTAAAAGGGAT+AGG + chr2_4:7332452-7332471 None:intergenic 50.0%
TTTGGTCGTTGGATCAGGCT+CGG + chr2_4:7333048-7333067 None:intergenic 50.0%
TTAATCTGCCCGCAAAGTCC+CGG - chr2_4:7334338-7334357 Msa0312320:intron 50.0%
CCAACTGAGCTAAGCTCATG+AGG + chr2_4:7335058-7335077 None:intergenic 50.0%
CCTCATGAGCTTAGCTCAGT+TGG - chr2_4:7335055-7335074 Msa0312320:CDS 50.0%
CTCGGACATCGTTAGGGTTA+GGG + chr2_4:7335421-7335440 None:intergenic 50.0%
CAGTTGCTCGGACATCGTTA+GGG + chr2_4:7335427-7335446 None:intergenic 50.0%
TCAGTTGCTCGGACATCGTT+AGG + chr2_4:7335428-7335447 None:intergenic 50.0%
! TTCGGTACAAGTTGGGCCTT+AGG - chr2_4:7335981-7336000 Msa0312320:CDS 50.0%
CAAGGTGACGTGTCCAATGA+TGG + chr2_4:7336814-7336833 None:intergenic 50.0%
GGACGTTGATATGGGGATTG+GGG + chr2_4:7337187-7337206 None:intergenic 50.0%
!! GAGCGCTCTGGAGATTCAAT+TGG - chr2_4:7338388-7338407 Msa0312320:intron 50.0%
TCTTCCTGCATGTTCTCCAC+TGG - chr2_4:7338521-7338540 Msa0312320:intron 50.0%
TGTGTCCGTTTCATCACGGT+AGG - chr2_4:7338977-7338996 Msa0312320:intron 50.0%
CCTCATTCTTCTCAGCCTCA+AGG + chr2_4:7339155-7339174 None:intergenic 50.0%
CCTTGAGGCTGAGAAGAATG+AGG - chr2_4:7339152-7339171 Msa0312320:intron 50.0%
GAGTGAAACTTCCGGCAGAT+AGG + chr2_4:7339269-7339288 None:intergenic 50.0%
GCCATCCTTCGATGTTTCCT+TGG + chr2_4:7339523-7339542 None:intergenic 50.0%
GAGTGAAACTTCCGGCAGAT+AGG + chr2_4:7339269-7339288 None:intergenic 50.0%
! AAACTGGTCTCCTGAATCCC+AGG - chr2_4:7339578-7339597 Msa0312320:intron 50.0%
TCAAAGGATGGCCTATCTGC+CGG - chr2_4:7339807-7339826 Msa0312320:intron 50.0%
GAGTGAAACTTCCGGCAGAT+AGG + chr2_4:7339269-7339288 None:intergenic 50.0%
TCAAAGGATGGCCTATCTGC+CGG - chr2_4:7339807-7339826 Msa0312320:intron 50.0%
GTGTGAAACTTCCGGCAGAT+AGG + chr2_4:7340097-7340116 None:intergenic 50.0%
! AAACTGGTCTCCTGAATCCC+AGG - chr2_4:7339578-7339597 Msa0312320:intron 50.0%
! AAACTGGTCTCCTGAATCCC+AGG - chr2_4:7339578-7339597 Msa0312320:intron 50.0%
ACCATCAAGTCTTCGACGGA+AGG + chr2_4:7340813-7340832 None:intergenic 50.0%
CCTGACCATCAAGTCTTCGA+CGG + chr2_4:7340817-7340836 None:intergenic 50.0%
GTACCCCTTTCTCATCTCCT+AGG - chr2_4:7341437-7341456 Msa0312320:intron 50.0%
CATTGGGAGGTGAATACCTC+TGG - chr2_4:7341529-7341548 Msa0312320:intron 50.0%
TTGGGAGGTGAATACCTCTG+GGG - chr2_4:7341531-7341550 Msa0312320:intron 50.0%
TGGTGAGTAGCAGCAAGTCT+CGG + chr2_4:7342583-7342602 None:intergenic 50.0%
TGGCGACTATGCCTCTTAGA+AGG + chr2_4:7342658-7342677 None:intergenic 50.0%
CTGCAACACCAGTGAAAGGA+AGG - chr2_4:7342972-7342991 Msa0312320:intron 50.0%
TCCGGCGAGAATTTCGGGAA+TGG + chr2_4:7332108-7332127 None:intergenic 55.0%
! GCTTACCGGTGTCGGAAAAC+CGG + chr2_4:7332157-7332176 None:intergenic 55.0%
TTTCCGGTGACCGGAGAAGA+TGG - chr2_4:7332198-7332217 Msa0312320:three_prime_UTR 55.0%
ATCAGGGACGTACACGTGGA+CGG - chr2_4:7332313-7332332 Msa0312320:CDS 55.0%
ACGTACACGTGGACGGTGAT+GGG - chr2_4:7332320-7332339 Msa0312320:CDS 55.0%
!! GTGGACGGTGATGGGTAGAT+GGG - chr2_4:7332328-7332347 Msa0312320:CDS 55.0%
!! TGGACGGTGATGGGTAGATG+GGG - chr2_4:7332329-7332348 Msa0312320:CDS 55.0%
! TGATGGGTAGATGGGGGACA+TGG - chr2_4:7332336-7332355 Msa0312320:CDS 55.0%
GATGGGTAGATGGGGGACAT+GGG - chr2_4:7332337-7332356 Msa0312320:CDS 55.0%
AGAAGCTTCCGGGACTTTGC+GGG + chr2_4:7334349-7334368 None:intergenic 55.0%
CAGAAGCTTCCGGGACTTTG+CGG + chr2_4:7334350-7334369 None:intergenic 55.0%
GCTCGGACATCGTTAGGGTT+AGG + chr2_4:7335422-7335441 None:intergenic 55.0%
GTCCGAGCAACTGAGCTAAG+CGG - chr2_4:7335434-7335453 Msa0312320:CDS 55.0%
TCCGAGCAACTGAGCTAAGC+GGG - chr2_4:7335435-7335454 Msa0312320:CDS 55.0%
TCCCGCTTAGCTCAGTTGCT+CGG + chr2_4:7335439-7335458 None:intergenic 55.0%
CACTAATGTCGGCATCCACC+TGG - chr2_4:7337393-7337412 Msa0312320:intron 55.0%
TCCTGCATGTTCTCCACTGG+TGG - chr2_4:7338524-7338543 Msa0312320:intron 55.0%
TCCACCAGTGGAGAACATGC+AGG + chr2_4:7338528-7338547 None:intergenic 55.0%
ACCAAGGAAGGCCTATCTGC+CGG - chr2_4:7339255-7339274 Msa0312320:intron 55.0%
TTATCATCGGCAGACGCAGC+TGG + chr2_4:7339330-7339349 None:intergenic 55.0%
TCGAAGGATGGCCTATCTGC+CGG - chr2_4:7339531-7339550 Msa0312320:intron 55.0%
! GGCGTTGAAACCTGGGATTC+AGG + chr2_4:7339591-7339610 None:intergenic 55.0%
! GGCAGATGGCGTTGAAACCT+GGG + chr2_4:7339598-7339617 None:intergenic 55.0%
! ACGAGGACAAACTGGTCTCC+TGG - chr2_4:7339846-7339865 Msa0312320:intron 55.0%
! AAACTGGTCTCCTGGATCCC+AGG - chr2_4:7339854-7339873 Msa0312320:intron 55.0%
TTATCATCGGCAGATGCCGC+TGG + chr2_4:7339882-7339901 None:intergenic 55.0%
TCTCATTCTGCTCGGCCTTG+AGG + chr2_4:7339971-7339990 None:intergenic 55.0%
TTATCATCGGCAGACGCAGC+TGG + chr2_4:7339330-7339349 None:intergenic 55.0%
GGAAGATGCAGCTGGAACCT+GGG + chr2_4:7340426-7340445 None:intergenic 55.0%
GCCTTCCGTCGAAGACTTGA+TGG - chr2_4:7340809-7340828 Msa0312320:intron 55.0%
! CCGTCGAAGACTTGATGGTC+AGG - chr2_4:7340814-7340833 Msa0312320:intron 55.0%
TGGCGTGCACATACGGTAAG+TGG - chr2_4:7341651-7341670 Msa0312320:intron 55.0%
TGTCGAAGTCCATGTGCTGC+TGG + chr2_4:7342508-7342527 None:intergenic 55.0%
AGCGTGAGAAGAGGGGGTGA+GGG + chr2_4:7331962-7331981 None:intergenic 60.0%
AAGCGTGAGAAGAGGGGGTG+AGG + chr2_4:7331963-7331982 None:intergenic 60.0%
CCACCATCTTCTCCGGTCAC+CGG + chr2_4:7332204-7332223 None:intergenic 60.0%
GACGTACACGTGGACGGTGA+TGG - chr2_4:7332319-7332338 Msa0312320:CDS 60.0%
!! CGTGGACGGTGATGGGTAGA+TGG - chr2_4:7332327-7332346 Msa0312320:CDS 60.0%
!! GGACGGTGATGGGTAGATGG+GGG - chr2_4:7332330-7332349 Msa0312320:CDS 60.0%
ACATGGGAGGAGCTCCTCCT+TGG - chr2_4:7332353-7332372 Msa0312320:CDS 60.0%
! TCCTTGGTGGGGCGGTTTTC+CGG - chr2_4:7332369-7332388 Msa0312320:CDS 60.0%
TCCAGTCTCGTGTCCCGTAC+CGG + chr2_4:7332391-7332410 None:intergenic 60.0%
GGCAGATAGGCCTTCCTTGG+TGG + chr2_4:7339256-7339275 None:intergenic 60.0%
TCCGGCAGATAGGCCTTCCT+TGG + chr2_4:7339259-7339278 None:intergenic 60.0%
GCAGCTGGAACCTGGGATTC+AGG + chr2_4:7339315-7339334 None:intergenic 60.0%
! CGGCAGATGGCGTTGAAACC+TGG + chr2_4:7339599-7339618 None:intergenic 60.0%
TCCTGGATCCCAGGTTCCAG+CGG - chr2_4:7339863-7339882 Msa0312320:intron 60.0%
GCAGCTGGAACCTGGGATTC+AGG + chr2_4:7339315-7339334 None:intergenic 60.0%
GCAGCTGGAACCTGGGATTC+AGG + chr2_4:7339315-7339334 None:intergenic 60.0%
CGGAAGATGCAGCTGGAACC+TGG + chr2_4:7340427-7340446 None:intergenic 60.0%
CCGGTGACCGGAGAAGATGG+TGG - chr2_4:7332201-7332220 Msa0312320:exon 65.0%
GGGTAGATGGGGGACATGGG+AGG - chr2_4:7332340-7332359 Msa0312320:CDS 65.0%
TGGGAGGAGCTCCTCCTTGG+TGG - chr2_4:7332356-7332375 Msa0312320:CDS 65.0%
GGGAGGAGCTCCTCCTTGGT+GGG - chr2_4:7332357-7332376 Msa0312320:CDS 65.0%
GGAGGAGCTCCTCCTTGGTG+GGG - chr2_4:7332358-7332377 Msa0312320:CDS 65.0%
GGAAAACCGCCCCACCAAGG+AGG + chr2_4:7332370-7332389 None:intergenic 65.0%
ACCGGAAAACCGCCCCACCA+AGG + chr2_4:7332373-7332392 None:intergenic 65.0%
! GGTGGGGCGGTTTTCCGGTA+CGG - chr2_4:7332374-7332393 Msa0312320:CDS 65.0%
! GTGGGGCGGTTTTCCGGTAC+GGG - chr2_4:7332375-7332394 Msa0312320:CDS 65.0%
TCCGGTACGGGACACGAGAC+TGG - chr2_4:7332387-7332406 Msa0312320:CDS 65.0%
CGAGACTGGAACGTCGTCGC+CGG - chr2_4:7332401-7332420 Msa0312320:CDS 65.0%
GGCAGACGCAGCTGGAACCT+GGG + chr2_4:7339322-7339341 None:intergenic 65.0%
GGCAGATGCCGCTGGAACCT+GGG + chr2_4:7339874-7339893 None:intergenic 65.0%
GGCAGACGCAGCTGGAACCT+GGG + chr2_4:7339322-7339341 None:intergenic 65.0%
GGAGCTCCTCCTTGGTGGGG+CGG - chr2_4:7332361-7332380 Msa0312320:CDS 70.0%
CGGCAGACGCAGCTGGAACC+TGG + chr2_4:7339323-7339342 None:intergenic 70.0%
GCCGCTGGAACCTGGGATCC+AGG + chr2_4:7339867-7339886 None:intergenic 70.0%
CGGCAGATGCCGCTGGAACC+TGG + chr2_4:7339875-7339894 None:intergenic 70.0%
CGGCAGACGCAGCTGGAACC+TGG + chr2_4:7339323-7339342 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 7331910 7343325 7331910 ID=Msa0312320;Name=Msa0312320
chr2_4 mRNA 7331910 7343325 7331910 ID=Msa0312320-mRNA-1;Parent=Msa0312320;Name=Msa0312320-mRNA-1;_AED=0.02;_eAED=0.02;_QI=281|1|0.83|1|0.8|0.66|6|310|835
chr2_4 exon 7331910 7332756 7331910 ID=Msa0312320-mRNA-1:exon:2812;Parent=Msa0312320-mRNA-1
chr2_4 exon 7334400 7336107 7334400 ID=Msa0312320-mRNA-1:exon:2811;Parent=Msa0312320-mRNA-1
chr2_4 exon 7336825 7336905 7336825 ID=Msa0312320-mRNA-1:exon:2810;Parent=Msa0312320-mRNA-1
chr2_4 exon 7337223 7337272 7337223 ID=Msa0312320-mRNA-1:exon:2809;Parent=Msa0312320-mRNA-1
chr2_4 exon 7342766 7342917 7342766 ID=Msa0312320-mRNA-1:exon:2808;Parent=Msa0312320-mRNA-1
chr2_4 exon 7343065 7343325 7343065 ID=Msa0312320-mRNA-1:exon:2807;Parent=Msa0312320-mRNA-1
chr2_4 five_prime_UTR 7343065 7343325 7343065 ID=Msa0312320-mRNA-1:five_prime_utr;Parent=Msa0312320-mRNA-1
chr2_4 five_prime_UTR 7342898 7342917 7342898 ID=Msa0312320-mRNA-1:five_prime_utr;Parent=Msa0312320-mRNA-1
chr2_4 CDS 7342766 7342897 7342766 ID=Msa0312320-mRNA-1:cds;Parent=Msa0312320-mRNA-1
chr2_4 CDS 7337223 7337272 7337223 ID=Msa0312320-mRNA-1:cds;Parent=Msa0312320-mRNA-1
chr2_4 CDS 7336825 7336905 7336825 ID=Msa0312320-mRNA-1:cds;Parent=Msa0312320-mRNA-1
chr2_4 CDS 7334400 7336107 7334400 ID=Msa0312320-mRNA-1:cds;Parent=Msa0312320-mRNA-1
chr2_4 CDS 7332220 7332756 7332220 ID=Msa0312320-mRNA-1:cds;Parent=Msa0312320-mRNA-1
chr2_4 three_prime_UTR 7331910 7332219 7331910 ID=Msa0312320-mRNA-1:three_prime_utr;Parent=Msa0312320-mRNA-1
Gene Sequence

>Msa0312320

ATGGGTAGATGGGGGACATGGGAGGAGCTCCTCCTTGGTGGGGCGGTTTTCCGGTACGGGACACGAGACTGGAACGTCGTCGCCGGTGAACTTCGAGAACGCATTGATTGTCCTATCCCTTTTACCCCTGAGGTCTGTAAAGCTAAGTATGAAGATTTGCAACAACGGTATTCTGGGAGCACGGATTTTTTGTATGAGGAGCTTAGGAAAAGAAGAGTAGAAGAGCTAAAGAAAGCTATTGAGCGCTCTGGAGATTCAATTGGGTCTCTTAAATCAAAGATTGAAGACCTTGAGGCTGAGAAGAATGAGGAAAAAGATGATTGTGAAAATGGCTTAGAAATTCCAGCATCACATTTACCTTCACAGAAATTGGAGAGAGTTAAATCTTCCACCAAGGAAGGCCTATCTGCCGGAAGTTTCACTCATGAAACGAGGACAAACTGGTTTCCTGAATCCCAGGTTCCAGCTGCGTCTGCCGATGATAACGAGACTAAGCCTGAAGTTTCACAATCTACTGAGCAGGATAAAGTTTCGCAATCAAAGCTTGAAGTCCTCAAGGTTGAGAAGAAGGATAAAAATCATGACTGTGAAAATGGCTTAGAAAGTCCCGTATCACATTTACCTTCCCAGAAATTGGAGAGAGTTAAATCTTCCACCAAGGAAACATCGAAGGATGGCCTATCTGCCGGAAGTTTCACTCACGAAATGAGGACAAACTGGTCTCCTGAATCCCAGGTTTCAACGCCATCTGCCGATAATAACGAAACTAAGCTTGAAGTTTTGCAATCTACTGAGCAGGCTGAAGTTTTGCAATCAAAGCTTGAAGTCCTCAAAGCTGAGAAGAACGAGAAAAAACATGGTTGTGAAAATGGCTTAGAAAGTCCCATATCACATGTACCTTCGCAGAAATTGGAGAGAGTTAAATCTTGCACTAAAGAAACATCAAAGGATGGCCTATCTGCCGGAAGTTTCACTCACAAAACGAGGACAAACTGGTCTCCTGGATCCCAGGTTCCAGCGGCATCTGCCGATGATAACGAGACTAAGCCTGAAGTTTTGCAATCTACCGAGCAGGCTAAAGTTTCGCAATCAAAGCTTGAAGTCCTCAAGGCCGAGCAGAATGAGAAAAAAGATGATTGTGAAAATGGCTTAGAAAGTCCAGTATCACATTTACCATCCCAGAAATTGGAGAGAGTTAAAACTTCCACTAAAGAAACATCAAAGGATGGCCTATCTGCCGGAAGTTTCACACACGAAACAAGGACAAACTGGTCTCCTGAATCCCAGGTTCCAGCTGCGTCTGCCGATGATAACGAGACTAAGCCTGAAGTTTCACAATCTACTGAGCAGGATAAAGTTTCGCGACCAAAGCTTGAATTCCTCATGGATGAGAAGAATGAGAAAAAAGATGATTGTGAAAATGGCTTAGAAAGTCCAGTATCACATTTACCATCCCAGAAATTGGTGAGAGTTGAATCTTCCGCTAAAGAGACATCAAAGGAAGGATTATCTGTCGGGAGTTTCACACACGAAACAAGGACAAACTGGTCTCCTGAATCCCAGGTTCCAGCTGCATCTTCCGATGATAATGAAACTAAGCCAGAAGTTTCACATTCTACTAAGCAGGCTAAAGTTTTGAATGGAGATAATTTGGAACTTACTTTATATGAAATACAAGTAGGATGTCGTAAAAAACGGAGAGGGAAGAGAAAAAGGAAGGATTGTGGAAGAAATATTATGGAAGTGGCAAGTCTAGAAGAAAGTGATGTATTAGATTCAGCTGATGTTATGTCCTGGCGTAAAGAAAGTTCTACTAGTAACTGTTGTGAAGTTGCCAAATCTTCTGCTCATGTAGACAATAAAAAAAGTAAGAACCTGAAAAAGCATAGCACGGAAGATATGATTAAGATTTTAGATTCTATTTTTGAAACTGAAGGTGCATCTGCCTTCCGTCGAAGACTTGATGGTCAGAAAAGAGGAAAGTACAAGAAAATGATCCAGCAGCACATGGACTTCGACACTATAAGGTCAAGAATTAGCAGCCGAACAATTGAATCAACCAGAGAACTATACCGAGACTTGCTGCTACTCACCAACAATGCCCTAGTCTTCTACTCGAAGATCACTCGTGAATATAAAACTGCTCTCCTTCTAAGAGGCATAGTCGCCAAAAAAATGAGGGAGAGTTTCAAGGGTAGTACTAGTAGCAGCAACAAAGTCACTGAGCCTAATGAGTCTACGAAATTACCAGTGCATCATAATCTTCATGTGAAACCAAGAAGTGTAAGACCAGGCAACAGAAAAATCATTGCAAAGGCTGTTGGTGGCGACAACTCTGCATCTTCACAAGGAGCTAAGAAGCCCATTAAAGCCGATTCTTCACATTCTGTGGAATCCTTAAATGTCATGAAGAAAGCTTTTGGTAGACAGAAAAAAGTCGGACCTGTGACTTCAAGTCAAAAGACTGCAACACCAGTGAAAGGAAGGAAAAGAGTTAGAACAAAGTAG
Protein sequence

>Msa0312320

MGRWGTWEELLLGGAVFRYGTRDWNVVAGELRERIDCPIPFTPEVCKAKYEDLQQRYSGSTDFLYEELRKRRVEELKKAIERSGDSIGSLKSKIEDLEAEKNEEKDDCENGLEIPASHLPSQKLERVKSSTKEGLSAGSFTHETRTNWFPESQVPAASADDNETKPEVSQSTEQDKVSQSKLEVLKVEKKDKNHDCENGLESPVSHLPSQKLERVKSSTKETSKDGLSAGSFTHEMRTNWSPESQVSTPSADNNETKLEVLQSTEQAEVLQSKLEVLKAEKNEKKHGCENGLESPISHVPSQKLERVKSCTKETSKDGLSAGSFTHKTRTNWSPGSQVPAASADDNETKPEVLQSTEQAKVSQSKLEVLKAEQNEKKDDCENGLESPVSHLPSQKLERVKTSTKETSKDGLSAGSFTHETRTNWSPESQVPAASADDNETKPEVSQSTEQDKVSRPKLEFLMDEKNEKKDDCENGLESPVSHLPSQKLVRVESSAKETSKEGLSVGSFTHETRTNWSPESQVPAASSDDNETKPEVSHSTKQAKVLNGDNLELTLYEIQVGCRKKRRGKRKRKDCGRNIMEVASLEESDVLDSADVMSWRKESSTSNCCEVAKSSAHVDNKKSKNLKKHSTEDMIKILDSIFETEGASAFRRRLDGQKRGKYKKMIQQHMDFDTIRSRISSRTIESTRELYRDLLLLTNNALVFYSKITREYKTALLLRGIVAKKMRESFKGSTSSSNKVTEPNESTKLPVHHNLHVKPRSVRPGNRKIIAKAVGGDNSASSQGAKKPIKADSSHSVESLNVMKKAFGRQKKVGPVTSSQKTATPVKGRKRVRTK*