AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0191750

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0191750 MtrunA17_Chr2g0281431 90.584 839 75 1 1 835 1 839 0.0 1482
Msa0191750 MtrunA17_Chr4g0047931 53.942 482 191 12 363 833 95 556 8.16e-129 397
Msa0191750 MtrunA17_Chr4g0047931 57.483 294 109 7 4 288 9 295 2.52e-89 293
Msa0191750 MtrunA17_Chr4g0047931 54.054 185 82 2 179 361 95 278 5.21e-43 165
Msa0191750 MtrunA17_Chr2g0308521 30.660 212 115 8 4 191 21 224 8.35e-14 75.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0191750 AT1G61215.2 42.387 243 116 5 492 727 118 343 3.07e-41 158
Msa0191750 AT1G61215.2 43.333 120 60 3 44 156 34 152 4.14e-15 79.3
Msa0191750 AT1G61215.1 42.387 243 116 5 492 727 137 362 5.08e-41 157
Msa0191750 AT1G61215.1 50.625 160 70 4 4 156 14 171 1.11e-34 139
Msa0191750 AT2G42150.1 40.367 109 54 1 4 101 16 124 2.28e-15 80.9
Msa0191750 AT2G42150.1 32.847 137 89 2 631 764 273 409 2.50e-14 77.4
Msa0191750 AT3G60110.1 34.921 126 61 2 4 110 52 175 3.85e-14 77.0
Msa0191750 AT3G57980.1 41.000 100 53 3 633 731 298 392 1.18e-13 75.5
Msa0191750 AT3G57980.1 40.000 115 52 2 4 101 16 130 3.39e-13 73.9
Msa0191750 AT3G57980.2 40.000 115 52 2 4 101 16 130 3.46e-13 73.9
Msa0191750 AT3G57980.2 40.196 102 53 4 633 731 298 394 4.54e-12 70.1
Msa0191750 AT2G44430.1 37.895 95 58 1 634 727 312 406 3.57e-12 70.5
Msa0191750 AT2G44430.1 34.307 137 55 3 4 105 50 186 1.38e-11 68.6

Find 205 sgRNAs with CRISPR-Local

Find 672 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCTTTCTTCATGACATTTA+AGG 0.114278 2_1:-7400679 None:intergenic
ATTTAACTCTCTCCAATTTC+TGG 0.116999 2_1:-7397329 None:intergenic
ATTCAACTCTCACCAATTTC+TGG 0.140644 2_1:-7398157 None:intergenic
ACATTTACCTTCACAGAAAT+TGG 0.178276 2_1:+7397053 Msa0191750:CDS
AACGGAGAGGGAAGAGAAAA+AGG 0.204707 2_1:+7398396 Msa0191750:CDS
TTGCCTGGTCTTACACTTCT+TGG 0.213585 2_1:-7400558 None:intergenic
ACATTTACCTTCCCAGAAAT+TGG 0.213715 2_1:+7397317 Msa0191750:CDS
GATTTGCAACAACGGTATTC+TGG 0.224102 2_1:+7395862 Msa0191750:CDS
AATAGTACCTCAGGGGTAAA+AGG 0.234659 2_1:-7390219 None:intergenic
ACATTTACCATCCCAGAAAT+TGG 0.247654 2_1:+7397869 Msa0191750:CDS
ACATTTACCATCCCAGAAAT+TGG 0.267489 2_1:+7398145 Msa0191750:CDS
ATGTGAAGAATCGGCTTTAA+TGG 0.268812 2_1:-7400646 None:intergenic
ACATGTACCTTCGCAGAAAT+TGG 0.269177 2_1:+7397593 Msa0191750:CDS
CTGCGAAGGTACATGTGATA+TGG 0.292733 2_1:-7397586 None:intergenic
GATAATAAACTTATCCATAT+TGG 0.300905 2_1:-7400983 None:intergenic
AAGCTTAGTTTCGTTATTAT+CGG 0.303151 2_1:-7397454 None:intergenic
CGTGGACGGTGATGGGTAGA+TGG 0.303874 2_1:+7390091 Msa0191750:exon
GGCGTTGAAACCTGGGATTC+AGG 0.314819 2_1:-7397426 None:intergenic
CGGCAGATGGCGTTGAAACC+TGG 0.327929 2_1:-7397434 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.328172 2_1:-7398254 None:intergenic
TTAGTAGAATGTGAAACTTC+TGG 0.329727 2_1:-7398302 None:intergenic
GCCTTCCGTCGAAGACTTGA+TGG 0.337126 2_1:+7398647 Msa0191750:CDS
GGTAATTTCGTAGACTCATT+AGG 0.339504 2_1:-7400510 None:intergenic
CGGCAGATGCCGCTGGAACC+TGG 0.342790 2_1:-7397710 None:intergenic
CGGCAGACGCAGCTGGAACC+TGG 0.344074 2_1:-7397158 None:intergenic
CGGCAGACGCAGCTGGAACC+TGG 0.344074 2_1:-7397986 None:intergenic
GTCTACATGAGCAGAAGATT+TGG 0.347205 2_1:-7398537 None:intergenic
CTCTGGTTGATTCAATTGTT+CGG 0.351506 2_1:-7400326 None:intergenic
AAAGTTATAGTTAACCAATA+TGG 0.363318 2_1:+7400969 Msa0191750:three_prime_UTR
TCTCGTTCTTCTCAGCTTTG+AGG 0.365599 2_1:-7397530 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.367686 2_1:-7397150 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.367686 2_1:-7397978 None:intergenic
ATCCTTTGATGTTTCTTTAG+TGG 0.371469 2_1:-7397907 None:intergenic
TGGGAGGAGCTCCTCCTTGG+TGG 0.373960 2_1:+7390120 Msa0191750:CDS
GAGCGCTCTGGAGATTCAAT+TGG 0.376339 2_1:+7396267 Msa0191750:CDS
GGATTGTGGAAGAAATATTA+TGG 0.379577 2_1:+7398421 Msa0191750:CDS
TGGCGACTATGCCTCTTAGA+AGG 0.380669 2_1:-7400431 None:intergenic
TCCGGTACGGGACACGAGAC+TGG 0.380957 2_1:+7390151 Msa0191750:CDS
ACATGGGAGGAGCTCCTCCT+TGG 0.388138 2_1:+7390117 Msa0191750:CDS
TGTGAAGAATCGGCTTTAAT+GGG 0.388925 2_1:-7400645 None:intergenic
CGGAAGATGCAGCTGGAACC+TGG 0.391729 2_1:-7398262 None:intergenic
TCAGTAGATTGTGAAACTTC+AGG 0.392693 2_1:-7397198 None:intergenic
TCAGTAGATTGTGAAACTTC+AGG 0.392693 2_1:-7398026 None:intergenic
AATGTCATGAAGAAAGCTTT+TGG 0.408688 2_1:+7400684 Msa0191750:CDS
TTCAACTCTCACCAATTTCT+GGG 0.408744 2_1:-7398156 None:intergenic
TTTAACTCTCTCCAATTTCT+GGG 0.408843 2_1:-7397880 None:intergenic
TCGGTAGATTGCAAAACTTC+AGG 0.410370 2_1:-7397750 None:intergenic
GCTTACCGGTGTCGGAAAAC+CGG 0.410663 2_1:-7389915 None:intergenic
GCCGCTGGAACCTGGGATCC+AGG 0.413242 2_1:-7397702 None:intergenic
ACATGGACTTCGACACTATA+AGG 0.413827 2_1:+7400289 Msa0191750:CDS
GGCAGATAGGCCTTCCTTGG+TGG 0.414688 2_1:-7397091 None:intergenic
GGGAGGAGCTCCTCCTTGGT+GGG 0.417029 2_1:+7390121 Msa0191750:CDS
ATTTGCAACAACGGTATTCT+GGG 0.420187 2_1:+7395863 Msa0191750:CDS
GCCATCCTTCGATGTTTCCT+TGG 0.421394 2_1:-7397358 None:intergenic
CTCACAAAACGAGGACAAAC+TGG 0.423655 2_1:+7397676 Msa0191750:CDS
TTTAACTCTCTCCAATTTCT+GGG 0.430061 2_1:-7397328 None:intergenic
CAAGTCTCGGTATAGTTCTC+TGG 0.431082 2_1:-7400343 None:intergenic
CTCATGAAACGAGGACAAAC+TGG 0.434890 2_1:+7397124 Msa0191750:CDS
TGTTTCGTGTGTGAAACTTC+CGG 0.436007 2_1:-7397940 None:intergenic
TTATCATCGGCAGACGCAGC+TGG 0.437623 2_1:-7397165 None:intergenic
TTATCATCGGCAGACGCAGC+TGG 0.437623 2_1:-7397993 None:intergenic
TGGGATGGTAAATGTGATAC+TGG 0.437681 2_1:-7397861 None:intergenic
TGGGATGGTAAATGTGATAC+TGG 0.437681 2_1:-7398137 None:intergenic
CTCACGAAATGAGGACAAAC+TGG 0.441034 2_1:+7397400 Msa0191750:CDS
TACACTTTGATGTAAATTGT+AGG 0.444799 2_1:+7401047 Msa0191750:three_prime_UTR
TTCCTTTGATGTCTCTTTAG+CGG 0.445950 2_1:-7398183 None:intergenic
GGTGAGGGATTCTATTTGTA+AGG 0.446188 2_1:-7389707 None:intergenic
GGCAGATGCCGCTGGAACCT+GGG 0.447609 2_1:-7397709 None:intergenic
CACACGAAACAAGGACAAAC+TGG 0.447900 2_1:+7397952 Msa0191750:CDS
CACACGAAACAAGGACAAAC+TGG 0.447900 2_1:+7398228 Msa0191750:CDS
CGTTTCATGAGTGAAACTTC+CGG 0.449518 2_1:-7397112 None:intergenic
TTATCATCGGCAGATGCCGC+TGG 0.451602 2_1:-7397717 None:intergenic
GTAGAAGACTAGGGCATTGT+TGG 0.455570 2_1:-7400376 None:intergenic
ACGAGGACAAACTGGTCTCC+TGG 0.456758 2_1:+7397684 Msa0191750:CDS
ATAGAGTAAGCGTGAGAAGA+GGG 0.456916 2_1:-7389730 None:intergenic
TCCATGAGGAATTCAAGCTT+TGG 0.458554 2_1:-7398068 None:intergenic
CATACCCACGTCAGAGAAAC+CGG 0.462893 2_1:+7389896 Msa0191750:five_prime_UTR
CCTCATTCTTCTCAGCCTCA+AGG 0.463301 2_1:-7396990 None:intergenic
CCTATTTGACAACAGAAAAG+AGG 0.465236 2_1:+7400240 Msa0191750:intron
TCCGGCAGATAGGCCTTCCT+TGG 0.468617 2_1:-7397094 None:intergenic
TGTCGAAGTCCATGTGCTGC+TGG 0.468742 2_1:-7400281 None:intergenic
AGTTTCACATTCTACTAAGC+AGG 0.470786 2_1:+7398307 Msa0191750:CDS
CATTTCGTGAGTGAAACTTC+CGG 0.471724 2_1:-7397388 None:intergenic
GTGGACGGTGATGGGTAGAT+GGG 0.472049 2_1:+7390092 Msa0191750:exon
TTCCACAGAATGTGAAGAAT+CGG 0.472831 2_1:-7400655 None:intergenic
ATCCTTCGATGTTTCCTTGG+TGG 0.477301 2_1:-7397355 None:intergenic
GGAGCTCCTCCTTGGTGGGG+CGG 0.479990 2_1:+7390125 Msa0191750:CDS
AGCCGATTCTTCACATTCTG+TGG 0.481332 2_1:+7400653 Msa0191750:CDS
CTGGGAAGGTAAATGTGATA+CGG 0.488701 2_1:-7397310 None:intergenic
GGCAGACGCAGCTGGAACCT+GGG 0.489961 2_1:-7397157 None:intergenic
GGCAGACGCAGCTGGAACCT+GGG 0.489961 2_1:-7397985 None:intergenic
AGCGCTCTGGAGATTCAATT+GGG 0.492698 2_1:+7396268 Msa0191750:CDS
TCCAGTCTCGTGTCCCGTAC+CGG 0.492867 2_1:-7390152 None:intergenic
TGGAAGAAATATTATGGAAG+TGG 0.494670 2_1:+7398427 Msa0191750:CDS
CCGTCGAAGACTTGATGGTC+AGG 0.495020 2_1:+7398652 Msa0191750:CDS
GAGTGAAACTTCCGGCAGAT+AGG 0.495730 2_1:-7397104 None:intergenic
AAACTGGTCTCCTGGATCCC+AGG 0.496812 2_1:+7397692 Msa0191750:CDS
CAAAGGAAGGATTATCTGTC+GGG 0.497613 2_1:+7398198 Msa0191750:CDS
GTGTGAAACTTCCGGCAGAT+AGG 0.498762 2_1:-7397932 None:intergenic
ATAGTACCTCAGGGGTAAAA+GGG 0.499560 2_1:-7390218 None:intergenic
GAGTGAAACTTCCGGCAGAT+AGG 0.501201 2_1:-7397380 None:intergenic
TGCGAAGGTACATGTGATAT+GGG 0.505813 2_1:-7397585 None:intergenic
ACTCTCTCCAATTTCTGGGA+TGG 0.506480 2_1:-7397876 None:intergenic
AGTCCTCAAGGTTGAGAAGA+AGG 0.506878 2_1:+7397251 Msa0191750:CDS
ACTCTCTCCAATTTCTGTGA+AGG 0.509839 2_1:-7397060 None:intergenic
TAGGACAATCAATGCGTTCT+CGG 0.509930 2_1:-7390194 None:intergenic
GAGTGAAACTTCCGGCAGAT+AGG 0.510135 2_1:-7397656 None:intergenic
AAAATAAGGCTTACCGGTGT+CGG 0.510309 2_1:-7389923 None:intergenic
ACTCTCTCCAATTTCTGGGA+AGG 0.512135 2_1:-7397324 None:intergenic
GGCAGATGGCGTTGAAACCT+GGG 0.515132 2_1:-7397433 None:intergenic
AGTAGAACTTTCTTTACGCC+AGG 0.515174 2_1:-7398495 None:intergenic
TCTCATTCTGCTCGGCCTTG+AGG 0.515915 2_1:-7397806 None:intergenic
TGTAGTTTATTGAAGGAGGA+AGG 0.518229 2_1:+7400868 Msa0191750:three_prime_UTR
AAGAAAGCTATTGAGCGCTC+TGG 0.520819 2_1:+7396255 Msa0191750:CDS
ACATGAAGATTATGATGCAC+TGG 0.521987 2_1:-7400531 None:intergenic
AAAACTGCTCTCCTTCTAAG+AGG 0.523048 2_1:+7400420 Msa0191750:CDS
TGGCTTAGTTTCATTATCAT+CGG 0.525043 2_1:-7398282 None:intergenic
GGAGGAGCTCCTCCTTGGTG+GGG 0.528293 2_1:+7390122 Msa0191750:CDS
GACGTACACGTGGACGGTGA+TGG 0.528307 2_1:+7390083 Msa0191750:exon
ATCATTGCAAAGGCTGTTGG+TGG 0.531039 2_1:+7400588 Msa0191750:CDS
TTTGATGTAAATTGTAGGCA+AGG 0.533063 2_1:+7401052 Msa0191750:three_prime_UTR
TGTGAAGGTAAATGTGATGC+TGG 0.533695 2_1:-7397045 None:intergenic
AATGAACTTGAGTTAGATGC+AGG 0.533923 2_1:+7400907 Msa0191750:three_prime_UTR
AAAATCATTGCAAAGGCTGT+TGG 0.537560 2_1:+7400585 Msa0191750:CDS
ACCAAGGAAGGCCTATCTGC+CGG 0.540490 2_1:+7397093 Msa0191750:CDS
AGTTTCACAATCTACTGAGC+AGG 0.540791 2_1:+7397203 Msa0191750:CDS
AGTTTCACAATCTACTGAGC+AGG 0.540791 2_1:+7398031 Msa0191750:CDS
AAACTGGTTTCCTGAATCCC+AGG 0.541785 2_1:+7397140 Msa0191750:CDS
TCGAAGGATGGCCTATCTGC+CGG 0.543453 2_1:+7397369 Msa0191750:CDS
TCAAAGGATGGCCTATCTGC+CGG 0.543453 2_1:+7397645 Msa0191750:CDS
TCAAAGGATGGCCTATCTGC+CGG 0.543453 2_1:+7397921 Msa0191750:CDS
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 2_1:-7397178 None:intergenic
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 2_1:-7397730 None:intergenic
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 2_1:-7398006 None:intergenic
GTTTCGTTATTATCGGCAGA+TGG 0.547357 2_1:-7397447 None:intergenic
TATCCTTCTTCTCAACCTTG+AGG 0.547638 2_1:-7397254 None:intergenic
AAACTGGTCTCCTGAATCCC+AGG 0.547815 2_1:+7397416 Msa0191750:CDS
AAACTGGTCTCCTGAATCCC+AGG 0.547815 2_1:+7397968 Msa0191750:CDS
AAACTGGTCTCCTGAATCCC+AGG 0.547815 2_1:+7398244 Msa0191750:CDS
AGAGTAAGCGTGAGAAGAGG+GGG 0.548257 2_1:-7389728 None:intergenic
CTGCAACACCAGTGAAAGGA+AGG 0.551244 2_1:+7400748 Msa0191750:CDS
AATGCGTTCTCGGAGTTCAC+CGG 0.551510 2_1:-7390184 None:intergenic
TGATCTTCGAGTAGAAGACT+AGG 0.551667 2_1:-7400386 None:intergenic
ACGTACACGTGGACGGTGAT+GGG 0.551870 2_1:+7390084 Msa0191750:exon
TTGCGAAACTTTAGCCTGCT+CGG 0.552400 2_1:-7397769 None:intergenic
ACTCTCACCAATTTCTGGGA+TGG 0.553891 2_1:-7398152 None:intergenic
AATAGAGTAAGCGTGAGAAG+AGG 0.555901 2_1:-7389731 None:intergenic
ACTTTATATGAAATACAAGT+AGG 0.556142 2_1:+7398362 Msa0191750:CDS
TCCTGGATCCCAGGTTCCAG+CGG 0.557730 2_1:+7397701 Msa0191750:CDS
TTGGTGTAGTTTATTGAAGG+AGG 0.558471 2_1:+7400864 Msa0191750:three_prime_UTR
AAAATGAGGGAGAGTTTCAA+GGG 0.558959 2_1:+7400456 Msa0191750:CDS
TAGAGTAAGCGTGAGAAGAG+GGG 0.559235 2_1:-7389729 None:intergenic
TGGGAAGGTAAATGTGATAC+GGG 0.559327 2_1:-7397309 None:intergenic
ACCATCAAGTCTTCGACGGA+AGG 0.559496 2_1:-7398648 None:intergenic
CGAGACTGGAACGTCGTCGC+CGG 0.566409 2_1:+7390165 Msa0191750:CDS
ACCAAAGCTTGAATTCCTCA+TGG 0.567620 2_1:+7398067 Msa0191750:CDS
GAAGTTTCACTCACGAAATG+AGG 0.567743 2_1:+7397391 Msa0191750:CDS
GGAAGATGCAGCTGGAACCT+GGG 0.568210 2_1:-7398261 None:intergenic
GTTAAATCTTCCACCAAGGA+AGG 0.569733 2_1:+7397081 Msa0191750:CDS
TTATCATCGGAAGATGCAGC+TGG 0.573606 2_1:-7398269 None:intergenic
ATTCAGCTGATGTTATGTCC+TGG 0.574362 2_1:+7398477 Msa0191750:CDS
ACTCTCTCCAATTTCTGCGA+AGG 0.574819 2_1:-7397600 None:intergenic
GACAACTCTGCATCTTCACA+AGG 0.577577 2_1:+7400612 Msa0191750:CDS
TCAAAGGAAGGATTATCTGT+CGG 0.582759 2_1:+7398197 Msa0191750:CDS
ATCAGGGACGTACACGTGGA+CGG 0.585049 2_1:+7390077 Msa0191750:intron
AAAACCGGTTTCTCTGACGT+GGG 0.592498 2_1:-7389900 None:intergenic
GAAGTTTCACACACGAAACA+AGG 0.592533 2_1:+7397943 Msa0191750:CDS
GGAGTTTCACACACGAAACA+AGG 0.592533 2_1:+7398219 Msa0191750:CDS
ATCAAAGCTTGAAGTCCTCA+AGG 0.595488 2_1:+7397791 Msa0191750:CDS
ACCGGAAAACCGCCCCACCA+AGG 0.597321 2_1:-7390134 None:intergenic
TCCGGCGAGAATTTCGGGAA+TGG 0.599880 2_1:-7389866 None:intergenic
ACCTCAGGGGTAAAAGGGAT+AGG 0.601507 2_1:-7390213 None:intergenic
ATCAAAGATTGAAGACCTTG+AGG 0.601679 2_1:+7396975 Msa0191750:CDS
AAGACTGCAACACCAGTGAA+AGG 0.602633 2_1:+7400744 Msa0191750:CDS
GAAAATGATCCAGCAGCACA+TGG 0.603766 2_1:+7400272 Msa0191750:CDS
CCTTGAGGCTGAGAAGAATG+AGG 0.604647 2_1:+7396990 Msa0191750:CDS
GGATAAGTTTATTATCAAAG+TGG 0.605616 2_1:+7400990 Msa0191750:three_prime_UTR
ATCAAAGCTTGAAGTCCTCA+AGG 0.605753 2_1:+7397239 Msa0191750:CDS
GAACTTGAGTTAGATGCAGG+AGG 0.608296 2_1:+7400910 Msa0191750:three_prime_UTR
TTGCACTAAAGAAACATCAA+AGG 0.610129 2_1:+7397629 Msa0191750:CDS
TTCCACTAAAGAAACATCAA+AGG 0.611385 2_1:+7397905 Msa0191750:CDS
ACCATTCCCGAAATTCTCGC+CGG 0.614241 2_1:+7389865 Msa0191750:five_prime_UTR
ACTAAAGAAACATCAAAGGA+TGG 0.614875 2_1:+7397909 Msa0191750:CDS
ACCAAGGAAACATCGAAGGA+TGG 0.615920 2_1:+7397357 Msa0191750:CDS
AATAATCAGGGACGTACACG+TGG 0.616115 2_1:+7390073 Msa0191750:intron
TGGACGGTGATGGGTAGATG+GGG 0.616380 2_1:+7390093 Msa0191750:exon
TCTCATTCTTCTCATCCATG+AGG 0.618938 2_1:-7398082 None:intergenic
GAAAACCGGTTTCTCTGACG+TGG 0.620355 2_1:-7389901 None:intergenic
CCTGACCATCAAGTCTTCGA+CGG 0.624531 2_1:-7398652 None:intergenic
TTCCACCAAGGAAACATCGA+AGG 0.625809 2_1:+7397353 Msa0191750:CDS
ACTAAAGAAACATCAAAGGA+TGG 0.630887 2_1:+7397633 Msa0191750:CDS
GCTAAAGAGACATCAAAGGA+AGG 0.634567 2_1:+7398185 Msa0191750:CDS
TTCCGCTAAAGAGACATCAA+AGG 0.636984 2_1:+7398181 Msa0191750:CDS
TGGTGAGTAGCAGCAAGTCT+CGG 0.639685 2_1:-7400356 None:intergenic
AACTTGAGTTAGATGCAGGA+GGG 0.650685 2_1:+7400911 Msa0191750:three_prime_UTR
GATCTTCGAGTAGAAGACTA+GGG 0.651766 2_1:-7400385 None:intergenic
AAACCAAGAAGTGTAAGACC+AGG 0.662834 2_1:+7400555 Msa0191750:CDS
AGTATGAAGATTTGCAACAA+CGG 0.672440 2_1:+7395854 Msa0191750:CDS
GGACGGTGATGGGTAGATGG+GGG 0.676840 2_1:+7390094 Msa0191750:exon
GGAAAACCGCCCCACCAAGG+AGG 0.682090 2_1:-7390131 None:intergenic
GAGAGTTAAATCTTCCACCA+AGG 0.685418 2_1:+7397341 Msa0191750:CDS
GAGAGTTAAATCTTCCACCA+AGG 0.692239 2_1:+7397077 Msa0191750:CDS
GAAGTTTCACTCACAAAACG+AGG 0.701520 2_1:+7397667 Msa0191750:CDS
AATTAATAATAGTACCTCAG+GGG 0.721941 2_1:-7390226 None:intergenic
GAAGTTTCACTCATGAAACG+AGG 0.747697 2_1:+7397115 Msa0191750:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAATTAAATAATT+TGG + chr2_1:7390246-7390265 Msa0191750:intron 0.0%
!! AATATAAATATAAAAAAAAA+AGG + chr2_1:7392305-7392324 Msa0191750:intron 0.0%
!! TAAAATTTAAATAATTAATT+CGG - chr2_1:7393146-7393165 None:intergenic 0.0%
!!! ATTTTAAAAAAATATTTTAA+CGG + chr2_1:7393160-7393179 Msa0191750:intron 0.0%
!! AAATTAAAATATTTAAATTT+AGG + chr2_1:7393973-7393992 Msa0191750:intron 0.0%
!! TATGTTATTATAAATAATCA+GGG + chr2_1:7390061-7390080 Msa0191750:intron 10.0%
!! AAAAAAATAGATAATATGAA+TGG - chr2_1:7392365-7392384 None:intergenic 10.0%
!!! TCCTAAATATTTTTTTTTAA+AGG + chr2_1:7393780-7393799 Msa0191750:intron 10.0%
!!! TCCTTTAAAAAAAAATATTT+AGG - chr2_1:7393784-7393803 None:intergenic 10.0%
!! TATTCATATAAAATATGAAT+TGG + chr2_1:7393804-7393823 Msa0191750:intron 10.0%
!! ATTCATATAAAATATGAATT+GGG + chr2_1:7393805-7393824 Msa0191750:intron 10.0%
!!! AAATTATTTACTACTTTTTT+AGG - chr2_1:7394583-7394602 None:intergenic 10.0%
!! TATTATTAACTAAACTAAAA+AGG + chr2_1:7395207-7395226 Msa0191750:intron 10.0%
!! ATTATTAACTAAACTAAAAA+GGG + chr2_1:7395208-7395227 Msa0191750:intron 10.0%
!!! TCTCATATATAAATTAATTT+TGG + chr2_1:7396593-7396612 Msa0191750:intron 10.0%
!! ATTAAAATTATATAAAAGTG+TGG + chr2_1:7396926-7396945 Msa0191750:intron 10.0%
!! AAGACAGAAAAAATAAAATA+AGG - chr2_1:7389940-7389959 None:intergenic 15.0%
!! GTATGTTATTATAAATAATC+AGG + chr2_1:7390060-7390079 Msa0191750:intron 15.0%
!!! TTTGGATTTTTTTTTTTTGA+AGG + chr2_1:7390264-7390283 Msa0191750:intron 15.0%
!!! TTTTTTTTTTTGAAGGATTT+TGG + chr2_1:7390271-7390290 Msa0191750:intron 15.0%
!!! TTTTTGAACTTTATCATTAT+GGG - chr2_1:7390326-7390345 None:intergenic 15.0%
!!! TTTTTTGAACTTTATCATTA+TGG - chr2_1:7390327-7390346 None:intergenic 15.0%
!!! ATCATGTATAATGTTTTTTT+GGG + chr2_1:7390435-7390454 Msa0191750:intron 15.0%
!!! ATTTTTAATTCGTAATTTGT+GGG - chr2_1:7390494-7390513 None:intergenic 15.0%
!!! TATTTTTAATTCGTAATTTG+TGG - chr2_1:7390495-7390514 None:intergenic 15.0%
!! CAAATTACGAATTAAAAATA+TGG + chr2_1:7390495-7390514 Msa0191750:intron 15.0%
!!! TTTTTTAATGATTAGTGTTA+TGG + chr2_1:7390564-7390583 Msa0191750:intron 15.0%
!! TAGTATACTTTATTGTATTT+AGG - chr2_1:7390810-7390829 None:intergenic 15.0%
!!! TTGATGAATGTTTTTTTTTA+AGG + chr2_1:7391328-7391347 Msa0191750:intron 15.0%
!! TAATGTAAAATAACTACATT+AGG + chr2_1:7391607-7391626 Msa0191750:intron 15.0%
!! AATGTAAAATAACTACATTA+GGG + chr2_1:7391608-7391627 Msa0191750:intron 15.0%
!! CATATTTAATTCTTATACAT+AGG - chr2_1:7392064-7392083 None:intergenic 15.0%
!! TAACCAAAAATATATATTGA+AGG - chr2_1:7392273-7392292 None:intergenic 15.0%
!!! TTAATTTTTGACAATTTCTT+TGG + chr2_1:7392459-7392478 Msa0191750:intron 15.0%
!!! TTTAAAATAAAAAAAGTCGT+TGG - chr2_1:7392793-7392812 None:intergenic 15.0%
!!! ACAAATAGTTTTTTTTTGTT+AGG + chr2_1:7392819-7392838 Msa0191750:intron 15.0%
!!! ATTTTTAATGTTAATAAGTG+AGG + chr2_1:7392865-7392884 Msa0191750:intron 15.0%
!!! TTAAAATTTAGGATACAATA+CGG - chr2_1:7393521-7393540 None:intergenic 15.0%
!!! CGCAATTTTTTTTAAAATTT+AGG - chr2_1:7393532-7393551 None:intergenic 15.0%
!!! CAAAAAAAGTTTTTTATTGA+AGG - chr2_1:7393624-7393643 None:intergenic 15.0%
!!! CAATTTTTATTAACTTCAAT+CGG - chr2_1:7393707-7393726 None:intergenic 15.0%
!! ATATAATAATAGAGGATAAA+GGG - chr2_1:7395184-7395203 None:intergenic 15.0%
!! AATATAATAATAGAGGATAA+AGG - chr2_1:7395185-7395204 None:intergenic 15.0%
!!! AAAAAATTGTGTTGTTTAAT+TGG + chr2_1:7395506-7395525 Msa0191750:intron 15.0%
!!! TTTTGTACAAAAATAATAGA+AGG + chr2_1:7395770-7395789 Msa0191750:intron 15.0%
!!! TATATAAGCTTTATATTTAG+TGG + chr2_1:7396115-7396134 Msa0191750:intron 15.0%
!! ATTAATTTATATATGAGAAG+CGG - chr2_1:7396591-7396610 None:intergenic 15.0%
!! TAAGATCAAAATTATTTGAT+AGG - chr2_1:7398978-7398997 None:intergenic 15.0%
!!! ATTTAACCTAATTCTAAAAT+GGG + chr2_1:7399378-7399397 Msa0191750:intron 15.0%
!! ATTTCATTACAAAAATACAT+AGG - chr2_1:7399491-7399510 None:intergenic 15.0%
!!! AGTTTTGTTAAATACTATAT+AGG + chr2_1:7399675-7399694 Msa0191750:intron 15.0%
!! AAAAATAAAATAAGGCTTAC+CGG - chr2_1:7389932-7389951 None:intergenic 20.0%
!!! TTTATTTTTTCTGTCTTTTC+CGG + chr2_1:7389943-7389962 Msa0191750:intron 20.0%
!!! TATTCTTATTTCAAACAACA+TGG + chr2_1:7390010-7390029 Msa0191750:intron 20.0%
!! TAATTAATAATAGTACCTCA+GGG - chr2_1:7390230-7390249 None:intergenic 20.0%
!! TTAATTAATAATAGTACCTC+AGG - chr2_1:7390231-7390250 None:intergenic 20.0%
!! CAAAAAAACATTATACATGA+TGG - chr2_1:7390436-7390455 None:intergenic 20.0%
!!! CATCATGTATAATGTTTTTT+TGG + chr2_1:7390434-7390453 Msa0191750:intron 20.0%
!!! TTAATGCTTTATTGTTGAAT+TGG + chr2_1:7390873-7390892 Msa0191750:intron 20.0%
!!! TAATGCTTTATTGTTGAATT+GGG + chr2_1:7390874-7390893 Msa0191750:intron 20.0%
!!! ATCCTATTCTAAATTTGTTT+TGG + chr2_1:7391100-7391119 Msa0191750:intron 20.0%
!! GCTAGAATAATATATATTGT+GGG + chr2_1:7391176-7391195 Msa0191750:intron 20.0%
!! AAATTACAAGAATCATTACA+AGG + chr2_1:7391219-7391238 Msa0191750:intron 20.0%
!! TAGATTAAAGAATCATTACA+AGG + chr2_1:7391249-7391268 Msa0191750:intron 20.0%
!!! TTTTTTGTAGTAGTTGATTT+CGG + chr2_1:7391499-7391518 Msa0191750:intron 20.0%
!!! AATTAATTTTCTCCTTTTGT+GGG - chr2_1:7391543-7391562 None:intergenic 20.0%
!!! AAATTAATTTTCTCCTTTTG+TGG - chr2_1:7391544-7391563 None:intergenic 20.0%
!!! GAATTAAATATGTTTTTGAG+AGG + chr2_1:7392072-7392091 Msa0191750:intron 20.0%
!!! AAGTCAAAGACATATTTTTA+AGG + chr2_1:7392206-7392225 Msa0191750:intron 20.0%
!!! TGACCTTCAATATATATTTT+TGG + chr2_1:7392267-7392286 Msa0191750:intron 20.0%
!! AAAAAAGGATCAAAACTAAA+AGG + chr2_1:7392320-7392339 Msa0191750:intron 20.0%
!!! ACAATGTTTTGTTGTATAAA+TGG + chr2_1:7392743-7392762 Msa0191750:intron 20.0%
!!! ACAAGAAGTATAATTTTAAG+CGG - chr2_1:7393356-7393375 None:intergenic 20.0%
!!! TGATAAGTTTAGGATTAAAA+CGG - chr2_1:7393733-7393752 None:intergenic 20.0%
!! AGATAAAACATGATAAGTTT+AGG - chr2_1:7393743-7393762 None:intergenic 20.0%
!! TTATATTACCAAACCAAAAA+AGG + chr2_1:7394048-7394067 Msa0191750:intron 20.0%
!!! ATCTTTTTTTTCTTTTGCTT+CGG - chr2_1:7394144-7394163 None:intergenic 20.0%
!! ATATATTTAATTGTTTCGCT+AGG + chr2_1:7394484-7394503 Msa0191750:intron 20.0%
!! TATATTTAATTGTTTCGCTA+GGG + chr2_1:7394485-7394504 Msa0191750:intron 20.0%
!!! ACTATTTTAAACTAATGGTT+AGG - chr2_1:7394687-7394706 None:intergenic 20.0%
!!! ACTCAACTATTTTAAACTAA+TGG - chr2_1:7394692-7394711 None:intergenic 20.0%
!! TAAAATAAGTGCTTATGAAA+TGG + chr2_1:7394926-7394945 Msa0191750:intron 20.0%
!!! AATTTTATAAAAGAGAGGTT+AGG - chr2_1:7395432-7395451 None:intergenic 20.0%
!!! TAACCTCTCTTTTATAAAAT+TGG + chr2_1:7395431-7395450 Msa0191750:intron 20.0%
!!! TTACCAATTTTATAAAAGAG+AGG - chr2_1:7395437-7395456 None:intergenic 20.0%
!!! ATAAAATTGGTAATCAGAAA+TGG + chr2_1:7395444-7395463 Msa0191750:intron 20.0%
!! AATTGGTAAATTTATGTAGA+TGG + chr2_1:7395523-7395542 Msa0191750:intron 20.0%
!!! AATTTATTGTTTCCTAGTTT+TGG + chr2_1:7395695-7395714 Msa0191750:intron 20.0%
!!! TTTTTGTTATAAACTTTTCC+TGG + chr2_1:7395914-7395933 Msa0191750:intron 20.0%
!!! ACTTCTATGAAATTTTCAAA+GGG - chr2_1:7396145-7396164 None:intergenic 20.0%
!!! AACTTCTATGAAATTTTCAA+AGG - chr2_1:7396146-7396165 None:intergenic 20.0%
!!! CCTAAATTTTTAAGAACAAA+CGG - chr2_1:7396384-7396403 None:intergenic 20.0%
!! TTTCAATACTCATTTCTATA+TGG + chr2_1:7396653-7396672 Msa0191750:intron 20.0%
!!! TTTACAATTACCTTTGTTTT+AGG - chr2_1:7396710-7396729 None:intergenic 20.0%
!! TAAGAATGTGTTGAATTATA+CGG - chr2_1:7396907-7396926 None:intergenic 20.0%
!! AAAAAAGATGATTGTGAAAA+TGG + chr2_1:7397828-7397847 Msa0191750:CDS 20.0%
!! AAAAAAGATGATTGTGAAAA+TGG + chr2_1:7397828-7397847 Msa0191750:CDS 20.0%
!! ACTTTATATGAAATACAAGT+AGG + chr2_1:7398362-7398381 Msa0191750:CDS 20.0%
!!! ATTTTGATTTTTACCTATGA+TGG + chr2_1:7398783-7398802 Msa0191750:intron 20.0%
!!! TAAGTTTTTTTTTTCCACAT+AGG + chr2_1:7399097-7399116 Msa0191750:intron 20.0%
!!! ACACATGTATATTTTTGTAA+CGG - chr2_1:7399153-7399172 None:intergenic 20.0%
!!! CATTTTAGAATTAGGTTAAA+TGG - chr2_1:7399379-7399398 None:intergenic 20.0%
!!! CATTTAACCTAATTCTAAAA+TGG + chr2_1:7399377-7399396 Msa0191750:intron 20.0%
!! TAAACAACTTAACAAGTTAA+AGG + chr2_1:7399599-7399618 Msa0191750:intron 20.0%
!! AAAGTTATAGTTAACCAATA+TGG + chr2_1:7400969-7400988 Msa0191750:three_prime_UTR 20.0%
!! GATAATAAACTTATCCATAT+TGG - chr2_1:7400986-7401005 None:intergenic 20.0%
!!! TTTTGCTGTCGAAAAAAATA+AGG - chr2_1:7389806-7389825 None:intergenic 25.0%
! TTTATAATAACATACGCACA+CGG - chr2_1:7390055-7390074 None:intergenic 25.0%
! AATTAATAATAGTACCTCAG+GGG - chr2_1:7390229-7390248 None:intergenic 25.0%
! CATTATGGGAAAAAACAAAA+AGG - chr2_1:7390312-7390331 None:intergenic 25.0%
!!! GTTTATTGTTTTGTTTGTAG+TGG + chr2_1:7390373-7390392 Msa0191750:intron 25.0%
! AACAAAAGTAGAAAACACAT+TGG - chr2_1:7390407-7390426 None:intergenic 25.0%
! AAACATTATACATGATGGTT+AGG - chr2_1:7390431-7390450 None:intergenic 25.0%
! TAAAAGAATAGGAAAAAGAG+AGG + chr2_1:7390597-7390616 Msa0191750:intron 25.0%
! AAAAGAATAGGAAAAAGAGA+GGG + chr2_1:7390598-7390617 Msa0191750:intron 25.0%
!!! AAGAGAGGGTATTAAATAAT+AGG + chr2_1:7390612-7390631 Msa0191750:intron 25.0%
!!! AGAGAGGGTATTAAATAATA+GGG + chr2_1:7390613-7390632 Msa0191750:intron 25.0%
! TCTTGTTAACTTATGCTATA+AGG + chr2_1:7390636-7390655 Msa0191750:intron 25.0%
! CTTGTTAACTTATGCTATAA+GGG + chr2_1:7390637-7390656 Msa0191750:intron 25.0%
!! TTATGAATGCACAATTTTCA+AGG - chr2_1:7390695-7390714 None:intergenic 25.0%
!! TTACGCATTTGACATATTTT+TGG - chr2_1:7391055-7391074 None:intergenic 25.0%
!! AGCCAAAACAAATTTAGAAT+AGG - chr2_1:7391105-7391124 None:intergenic 25.0%
!!! AATATAAACTTTTGAGAGCA+TGG + chr2_1:7391130-7391149 Msa0191750:intron 25.0%
!!! ACCCTATTCTAAATTTGTTT+TGG + chr2_1:7391154-7391173 Msa0191750:intron 25.0%
!! GCCAAAACAAATTTAGAATA+GGG - chr2_1:7391104-7391123 None:intergenic 25.0%
!! AGCCAAAACAAATTTAGAAT+AGG - chr2_1:7391105-7391124 None:intergenic 25.0%
! GGCTAGAATAATATATATTG+TGG + chr2_1:7391175-7391194 Msa0191750:intron 25.0%
! GAATAATATATATTGTGGGA+CGG + chr2_1:7391180-7391199 Msa0191750:intron 25.0%
! ATTTAAAAACTGTCTACACA+TGG + chr2_1:7391430-7391449 Msa0191750:intron 25.0%
!!! AGACTTTAACTTTTCTCTTT+AGG + chr2_1:7391570-7391589 Msa0191750:intron 25.0%
!!! GACTTTAACTTTTCTCTTTA+GGG + chr2_1:7391571-7391590 Msa0191750:intron 25.0%
!!! AACGTGTAAAGATTTGTTTT+AGG - chr2_1:7391737-7391756 None:intergenic 25.0%
!!! AAACGTGTAAAGATTTGTTA+AGG - chr2_1:7391896-7391915 None:intergenic 25.0%
!! TAACAAATCTTTACACGTTT+TGG + chr2_1:7391896-7391915 Msa0191750:intron 25.0%
! TCATTGCATAACATATATAG+AGG + chr2_1:7391942-7391961 Msa0191750:intron 25.0%
! ATATATATTGAAGGTCATGT+AGG - chr2_1:7392264-7392283 None:intergenic 25.0%
!!! ATTTGCTTTTAATAATTCCG+AGG + chr2_1:7392430-7392449 Msa0191750:intron 25.0%
! TCAAAAATTAAAGAATGCCT+CGG - chr2_1:7392450-7392469 None:intergenic 25.0%
! GCTTCATAGAAAAATAGTTA+AGG - chr2_1:7393031-7393050 None:intergenic 25.0%
!! TTTACTCTTCATCTTTTTCT+AGG - chr2_1:7393248-7393267 None:intergenic 25.0%
! ATTATACTTCTTGTGAATGA+AGG + chr2_1:7393362-7393381 Msa0191750:intron 25.0%
!! ATAAGTTTAGGATTAAAACG+GGG - chr2_1:7393731-7393750 None:intergenic 25.0%
!! GATAAGTTTAGGATTAAAAC+GGG - chr2_1:7393732-7393751 None:intergenic 25.0%
! ACATATTTCAACTAAGTAAG+TGG - chr2_1:7395320-7395339 None:intergenic 25.0%
! ATTAGAACAAACAAAGCAAA+AGG - chr2_1:7395395-7395414 None:intergenic 25.0%
!! TTTTTAATCCTATGCTTACT+AGG - chr2_1:7395488-7395507 None:intergenic 25.0%
!!! CTTAGAGATATTACTTTTGT+AGG + chr2_1:7395819-7395838 Msa0191750:intron 25.0%
!! AGAGACTATAAGATTTTACT+CGG + chr2_1:7396086-7396105 Msa0191750:intron 25.0%
! CCGTTTGTTCTTAAAAATTT+AGG + chr2_1:7396381-7396400 Msa0191750:intron 25.0%
! AAAAAAAATTATTAGCCGAG+TGG + chr2_1:7396498-7396517 Msa0191750:intron 25.0%
! AAGAATGTGTTGAATTATAC+GGG - chr2_1:7396906-7396925 None:intergenic 25.0%
! GAAAAAGATGATTGTGAAAA+TGG + chr2_1:7397012-7397031 Msa0191750:CDS 25.0%
! AAAAATCATGACTGTGAAAA+TGG + chr2_1:7397276-7397295 Msa0191750:CDS 25.0%
! AAGCTTAGTTTCGTTATTAT+CGG - chr2_1:7397457-7397476 None:intergenic 25.0%
! AAAAAACATGGTTGTGAAAA+TGG + chr2_1:7397552-7397571 Msa0191750:CDS 25.0%
!!! AGTTTTGAATGGAGATAATT+TGG + chr2_1:7398334-7398353 Msa0191750:CDS 25.0%
!!! GATTCTATTTTTGAAACTGA+AGG + chr2_1:7398617-7398636 Msa0191750:CDS 25.0%
! TTGTTATGGTCAAAATATGA+GGG + chr2_1:7398849-7398868 Msa0191750:intron 25.0%
! AAATTATTTGATAGGACTTG+AGG - chr2_1:7398970-7398989 None:intergenic 25.0%
!!! CTTCTAACCATTTTAGAATT+AGG + chr2_1:7399241-7399260 Msa0191750:intron 25.0%
!! CATATAGCCTAATTCTAAAA+TGG - chr2_1:7399251-7399270 None:intergenic 25.0%
! TAGAATTAGGTTAAATGGTT+TGG - chr2_1:7399374-7399393 None:intergenic 25.0%
! AATGAAATGTGTGTGAAAAA+TGG + chr2_1:7399503-7399522 Msa0191750:intron 25.0%
!! TTAAGTTGTTTAATTGTACC+TGG - chr2_1:7399591-7399610 None:intergenic 25.0%
! CTCATTATTAACTTAGTGTA+TGG + chr2_1:7399922-7399941 Msa0191750:intron 25.0%
! TATTAACTTAGTGTATGGTA+TGG + chr2_1:7399927-7399946 Msa0191750:intron 25.0%
!! AACAAAGTAGTAGTGATTTT+AGG + chr2_1:7400782-7400801 Msa0191750:exon 25.0%
!!! TGATTTTAGGTTTAACGAAT+AGG + chr2_1:7400795-7400814 Msa0191750:three_prime_UTR 25.0%
!!! TTTTTGGTGTAGTTTATTGA+AGG + chr2_1:7400861-7400880 Msa0191750:three_prime_UTR 25.0%
! GGATAAGTTTATTATCAAAG+TGG + chr2_1:7400990-7401009 Msa0191750:three_prime_UTR 25.0%
! TACACTTTGATGTAAATTGT+AGG + chr2_1:7401047-7401066 Msa0191750:three_prime_UTR 25.0%
!!! TAGTTTTTGTTGGTTTAAGG+TGG - chr2_1:7389846-7389865 None:intergenic 30.0%
!!! TGGTAGTTTTTGTTGGTTTA+AGG - chr2_1:7389849-7389868 None:intergenic 30.0%
! TCTTATTTCAAACAACATGG+CGG + chr2_1:7390013-7390032 Msa0191750:intron 30.0%
! GTAAGAGAGCATAAAAGAAT+AGG + chr2_1:7390586-7390605 Msa0191750:intron 30.0%
!!! TTTGACATATTTTTGGTCGT+TGG - chr2_1:7391048-7391067 None:intergenic 30.0%
CTACACATGGATCAATTTAA+TGG + chr2_1:7391443-7391462 Msa0191750:intron 30.0%
!! GCAATGTCAATGGATTATAT+CGG - chr2_1:7391698-7391717 None:intergenic 30.0%
AAACAAATCTTTACACGTTC+CGG + chr2_1:7391738-7391757 Msa0191750:intron 30.0%
!! GAACGTGTAAAGATTTGTTA+AGG - chr2_1:7391817-7391836 None:intergenic 30.0%
TAACAAATCTTTACACGTTC+TGG + chr2_1:7391817-7391836 Msa0191750:intron 30.0%
TGAGCTTAACTCAATTGATT+GGG + chr2_1:7391840-7391859 Msa0191750:intron 30.0%
CATAACATATATAGAGGTTG+AGG + chr2_1:7391948-7391967 Msa0191750:intron 30.0%
TAAGGTAATGCTTCATATAC+AGG + chr2_1:7392224-7392243 Msa0191750:intron 30.0%
AAGGTAATGCTTCATATACA+GGG + chr2_1:7392225-7392244 Msa0191750:intron 30.0%
! TTCATATACAGGGGTATAAA+AGG + chr2_1:7392235-7392254 Msa0191750:intron 30.0%
TGTTAATAAGTGAGGTCTTA+AGG + chr2_1:7392873-7392892 Msa0191750:intron 30.0%
!! AACTATTTTTCTATGAAGCC+CGG + chr2_1:7393032-7393051 Msa0191750:intron 30.0%
AATTAATTCGGATACTTCGT+GGG - chr2_1:7393134-7393153 None:intergenic 30.0%
TAATTAATTCGGATACTTCG+TGG - chr2_1:7393135-7393154 None:intergenic 30.0%
AGATGAAGAGTAAAAAAGTG+AGG + chr2_1:7393254-7393273 Msa0191750:intron 30.0%
!!! TTTTTTGCATAATCATCACG+CGG + chr2_1:7393637-7393656 Msa0191750:intron 30.0%
TAACTTTCTGATGTATCCTA+AGG - chr2_1:7394092-7394111 None:intergenic 30.0%
TTAATATTTACTCCCTTGTC+CGG + chr2_1:7394637-7394656 Msa0191750:intron 30.0%
TAAACTAATGGTTAGGAAGT+TGG - chr2_1:7394680-7394699 None:intergenic 30.0%
CACGTATCTTAACATATGTT+TGG - chr2_1:7394761-7394780 None:intergenic 30.0%
AAGATTAAGTTACAAGAGCA+AGG - chr2_1:7394907-7394926 None:intergenic 30.0%
ACAACTTGACAACAAAAAAG+TGG - chr2_1:7394987-7395006 None:intergenic 30.0%
ACATTAGTGTATATGACACA+TGG - chr2_1:7395260-7395279 None:intergenic 30.0%
TGTGTCATATACACTAATGT+TGG + chr2_1:7395260-7395279 Msa0191750:intron 30.0%
AGATAAATCCTAGTAAGCAT+AGG + chr2_1:7395477-7395496 Msa0191750:intron 30.0%
GAATGACAAGAAAACACAAA+AGG - chr2_1:7395554-7395573 None:intergenic 30.0%
AGTATGAAGATTTGCAACAA+CGG + chr2_1:7395854-7395873 Msa0191750:CDS 30.0%
AAATGTACTAACAAGTAACC+AGG - chr2_1:7395935-7395954 None:intergenic 30.0%
!!! ATTTTTTGTATGAGGAGCTT+AGG + chr2_1:7396211-7396230 Msa0191750:CDS 30.0%
!! ATTCAATTGGGTTAGTTTCA+TGG + chr2_1:7396280-7396299 Msa0191750:intron 30.0%
TAAAACTAACTTACACCACT+CGG - chr2_1:7396516-7396535 None:intergenic 30.0%
! AATGAGTTTTCATTGGAAGT+CGG - chr2_1:7396541-7396560 None:intergenic 30.0%
ATTGAAGAGACCTAAAACAA+AGG + chr2_1:7396697-7396716 Msa0191750:intron 30.0%
GTAAAAGGATTTACAAGTGT+TGG - chr2_1:7396766-7396785 None:intergenic 30.0%
ACATTTACCTTCACAGAAAT+TGG + chr2_1:7397053-7397072 Msa0191750:CDS 30.0%
TTTAACTCTCTCCAATTTCT+GGG - chr2_1:7397067-7397086 None:intergenic 30.0%
ATTTAACTCTCTCCAATTTC+TGG - chr2_1:7397068-7397087 None:intergenic 30.0%
TTGCACTAAAGAAACATCAA+AGG + chr2_1:7397629-7397648 Msa0191750:CDS 30.0%
ACTAAAGAAACATCAAAGGA+TGG + chr2_1:7397633-7397652 Msa0191750:CDS 30.0%
!!! ATCTTTTTTCTCATTCTGCT+CGG - chr2_1:7397817-7397836 None:intergenic 30.0%
TTTAACTCTCTCCAATTTCT+GGG - chr2_1:7397067-7397086 None:intergenic 30.0%
!! TTTTAACTCTCTCCAATTTC+TGG - chr2_1:7397884-7397903 None:intergenic 30.0%
TTCCACTAAAGAAACATCAA+AGG + chr2_1:7397905-7397924 Msa0191750:CDS 30.0%
ATCCTTTGATGTTTCTTTAG+TGG - chr2_1:7397634-7397653 None:intergenic 30.0%
ACTAAAGAAACATCAAAGGA+TGG + chr2_1:7397633-7397652 Msa0191750:CDS 30.0%
TGGCTTAGTTTCATTATCAT+CGG - chr2_1:7398285-7398304 None:intergenic 30.0%
TTAGTAGAATGTGAAACTTC+TGG - chr2_1:7398305-7398324 None:intergenic 30.0%
AAGTAGGATGTCGTAAAAAA+CGG + chr2_1:7398378-7398397 Msa0191750:CDS 30.0%
GGATTGTGGAAGAAATATTA+TGG + chr2_1:7398421-7398440 Msa0191750:CDS 30.0%
TGGAAGAAATATTATGGAAG+TGG + chr2_1:7398427-7398446 Msa0191750:CDS 30.0%
TCTAACAAAGTAACCATCAT+AGG - chr2_1:7398799-7398818 None:intergenic 30.0%
ATAGTTGTTTGATGTTCTCT+AGG + chr2_1:7398820-7398839 Msa0191750:intron 30.0%
TAGTTGTTTGATGTTCTCTA+GGG + chr2_1:7398821-7398840 Msa0191750:intron 30.0%
! CTTGTTATGGTCAAAATATG+AGG + chr2_1:7398848-7398867 Msa0191750:intron 30.0%
! TCTCACTTATGTTTTACTCA+CGG - chr2_1:7399001-7399020 None:intergenic 30.0%
TAGAATTAGGCTATATGACT+TGG + chr2_1:7399254-7399273 Msa0191750:intron 30.0%
ATACAGCTTAAAAGAGTTGT+TGG + chr2_1:7399542-7399561 Msa0191750:intron 30.0%
TTGTTTAATTGTACCTGGTT+GGG - chr2_1:7399586-7399605 None:intergenic 30.0%
AACTTAACAAGTTAAAGGAC+TGG + chr2_1:7399604-7399623 Msa0191750:intron 30.0%
TAAATACTATATAGGCTGTG+AGG + chr2_1:7399683-7399702 Msa0191750:intron 30.0%
AAGAAGTTCAAGAATAAGGT+CGG - chr2_1:7399729-7399748 None:intergenic 30.0%
GAGAAAGAAGTTCAAGAATA+AGG - chr2_1:7399733-7399752 None:intergenic 30.0%
CTCTTTGACGAAAAAAACAT+AGG - chr2_1:7399856-7399875 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG + chr2_1:7399998-7400017 Msa0191750:intron 30.0%
ACAAAAGAGATCAGTGAATA+TGG - chr2_1:7400047-7400066 None:intergenic 30.0%
ATTCTACATTGGCAACTTAA+TGG - chr2_1:7400128-7400147 None:intergenic 30.0%
CAAAGATGCAAATTCTACAT+TGG - chr2_1:7400139-7400158 None:intergenic 30.0%
CAACAGAAAAATCATTGCAA+AGG + chr2_1:7400578-7400597 Msa0191750:CDS 30.0%
AGCTTTCTTCATGACATTTA+AGG - chr2_1:7400682-7400701 None:intergenic 30.0%
! AATGTCATGAAGAAAGCTTT+TGG + chr2_1:7400684-7400703 Msa0191750:CDS 30.0%
TTTGGTAGACAGAAAAAAGT+CGG + chr2_1:7400702-7400721 Msa0191750:CDS 30.0%
! TACAAAGATTTTCTCCGTTT+TGG + chr2_1:7400830-7400849 Msa0191750:three_prime_UTR 30.0%
CAAAAAACACCTAACCAAAA+CGG - chr2_1:7400847-7400866 None:intergenic 30.0%
! CTAACTCAAGTTCATTTTGT+TGG - chr2_1:7400903-7400922 None:intergenic 30.0%
!!! TTTGTTTTTGCTAGCATCAA+AGG + chr2_1:7401021-7401040 Msa0191750:three_prime_UTR 30.0%
!!! TTGTTTTTGCTAGCATCAAA+GGG + chr2_1:7401022-7401041 Msa0191750:three_prime_UTR 30.0%
TTTGATGTAAATTGTAGGCA+AGG + chr2_1:7401052-7401071 Msa0191750:three_prime_UTR 30.0%
!!! GCAAGGTTTTTTTTTAGCAA+TGG + chr2_1:7401069-7401088 Msa0191750:three_prime_UTR 30.0%
!!! GGTTTAAGGTGGTTTTAAAG+AGG - chr2_1:7389835-7389854 None:intergenic 35.0%
ATCCTTATATTGTGCCCTAA+GGG + chr2_1:7390768-7390787 Msa0191750:intron 35.0%
!!! ATATTTTTGGTCGTTGGATC+AGG - chr2_1:7391042-7391061 None:intergenic 35.0%
GACAATTTACAACCCACAAA+AGG + chr2_1:7391528-7391547 Msa0191750:intron 35.0%
AATTGTGTCAGCAATGTCAA+TGG - chr2_1:7391708-7391727 None:intergenic 35.0%
TGAGCTTAACTCAATTGGTT+GGG + chr2_1:7391761-7391780 Msa0191750:intron 35.0%
GTGAGCTTAACTCAATTGAT+TGG + chr2_1:7391839-7391858 Msa0191750:intron 35.0%
TTTGGTGAGCTTAACTCAAT+TGG + chr2_1:7391914-7391933 Msa0191750:intron 35.0%
TGAGCTTAACTCAATTGGTT+AGG + chr2_1:7391761-7391780 Msa0191750:intron 35.0%
CGGGCAGATTAAAAATAAGT+AGG - chr2_1:7392133-7392152 None:intergenic 35.0%
AGGTAATGCTTCATATACAG+GGG + chr2_1:7392226-7392245 Msa0191750:intron 35.0%
TAAGTATCCTTGTGTATCTG+CGG - chr2_1:7393202-7393221 None:intergenic 35.0%
GAGGCAATGTTGTAAACATT+CGG + chr2_1:7393273-7393292 Msa0191750:intron 35.0%
! ATTTAGGATACAATACGGCT+AGG - chr2_1:7393516-7393535 None:intergenic 35.0%
ACCAAACCAAAAAAGGTCTT+CGG + chr2_1:7394055-7394074 Msa0191750:intron 35.0%
!! CGGTTTGTTCATTCTTGTTT+TGG - chr2_1:7394124-7394143 None:intergenic 35.0%
CTAAATTCAAATCCGGACAA+GGG - chr2_1:7394652-7394671 None:intergenic 35.0%
TTCTTATCCTACACACCAAA+AGG + chr2_1:7394806-7394825 Msa0191750:intron 35.0%
TCTTATCCTACACACCAAAA+GGG + chr2_1:7394807-7394826 Msa0191750:intron 35.0%
GTCCAATGAAAATCCATCAT+TGG + chr2_1:7394873-7394892 Msa0191750:intron 35.0%
!!! GTCCAATGATGGATTTTCAT+TGG - chr2_1:7394878-7394897 None:intergenic 35.0%
ATTTGCAACAACGGTATTCT+GGG + chr2_1:7395863-7395882 Msa0191750:CDS 35.0%
! TTTTTAATCCAGTAGCCTAG+TGG + chr2_1:7395967-7395986 Msa0191750:intron 35.0%
!! ACCCTTTGAGGTGAATAATT+GGG + chr2_1:7396000-7396019 Msa0191750:intron 35.0%
TGTTATGTCTCATTGCATGA+TGG + chr2_1:7396169-7396188 Msa0191750:intron 35.0%
ATGGTAAAATTGCAATGCCA+GGG + chr2_1:7396188-7396207 Msa0191750:intron 35.0%
GACTTCCAATGAAAACTCAT+TGG + chr2_1:7396540-7396559 Msa0191750:intron 35.0%
GGTTACAAAATAGGCTTATG+TGG - chr2_1:7396570-7396589 None:intergenic 35.0%
ATGAGAAGCGGTTACAAAAT+AGG - chr2_1:7396579-7396598 None:intergenic 35.0%
!!! ACAGTTCTGGTTTTTGAGTT+TGG - chr2_1:7396733-7396752 None:intergenic 35.0%
AATGTGTTGAATTATACGGG+TGG - chr2_1:7396903-7396922 None:intergenic 35.0%
TGTGGTTACTTGTATGTTTC+AGG + chr2_1:7396944-7396963 Msa0191750:intron 35.0%
ATCAAAGATTGAAGACCTTG+AGG + chr2_1:7396975-7396994 Msa0191750:CDS 35.0%
TCAGTAGATTGTGAAACTTC+AGG - chr2_1:7397201-7397220 None:intergenic 35.0%
ACATTTACCTTCCCAGAAAT+TGG + chr2_1:7397317-7397336 Msa0191750:CDS 35.0%
GAGAAGAACGAGAAAAAACA+TGG + chr2_1:7397540-7397559 Msa0191750:CDS 35.0%
ACATTTACCATCCCAGAAAT+TGG + chr2_1:7397869-7397888 Msa0191750:CDS 35.0%
TCAGTAGATTGTGAAACTTC+AGG - chr2_1:7397201-7397220 None:intergenic 35.0%
ACATTTACCATCCCAGAAAT+TGG + chr2_1:7397869-7397888 Msa0191750:CDS 35.0%
TTCAACTCTCACCAATTTCT+GGG - chr2_1:7398159-7398178 None:intergenic 35.0%
ATTCAACTCTCACCAATTTC+TGG - chr2_1:7398160-7398179 None:intergenic 35.0%
TTCCTTTGATGTCTCTTTAG+CGG - chr2_1:7398186-7398205 None:intergenic 35.0%
TCAAAGGAAGGATTATCTGT+CGG + chr2_1:7398197-7398216 Msa0191750:CDS 35.0%
AGTTTCACATTCTACTAAGC+AGG + chr2_1:7398307-7398326 Msa0191750:CDS 35.0%
!!! AAGCAGGCTAAAGTTTTGAA+TGG + chr2_1:7398323-7398342 Msa0191750:CDS 35.0%
AAGAGAAAAAGGAAGGATTG+TGG + chr2_1:7398407-7398426 Msa0191750:CDS 35.0%
! TCCATAAAAGCTTTTGATGC+TGG + chr2_1:7398733-7398752 Msa0191750:intron 35.0%
AATATGAGGGTCCTTAAAAG+AGG + chr2_1:7398862-7398881 Msa0191750:intron 35.0%
TTATTTGATAGGACTTGAGG+TGG - chr2_1:7398967-7398986 None:intergenic 35.0%
! TGAAAAGGGTAACGGTTAAA+AGG - chr2_1:7399124-7399143 None:intergenic 35.0%
! TGTAACGGAATGTGTGAAAA+GGG - chr2_1:7399138-7399157 None:intergenic 35.0%
! TTGTAACGGAATGTGTGAAA+AGG - chr2_1:7399139-7399158 None:intergenic 35.0%
AATGGTTAGAAGTTACACCT+AGG - chr2_1:7399233-7399252 None:intergenic 35.0%
CCAATGTACAAATTCTCAGA+GGG - chr2_1:7399291-7399310 None:intergenic 35.0%
! CCTCTGAGAATTTGTACATT+GGG + chr2_1:7399289-7399308 Msa0191750:intron 35.0%
!!! CTCTAGCCCATTTTAGAATT+AGG - chr2_1:7399387-7399406 None:intergenic 35.0%
!! CTAATTCTAAAATGGGCTAG+AGG + chr2_1:7399385-7399404 Msa0191750:intron 35.0%
TAACTTTGTTCCTACCATGT+TGG + chr2_1:7399451-7399470 Msa0191750:intron 35.0%
TGTTATGTTACCAACATGGT+AGG - chr2_1:7399464-7399483 None:intergenic 35.0%
TGTCTGTTATGTTACCAACA+TGG - chr2_1:7399468-7399487 None:intergenic 35.0%
GTTGTTTAATTGTACCTGGT+TGG - chr2_1:7399587-7399606 None:intergenic 35.0%
TTTCTCGAAGAACTTACGTA+AGG + chr2_1:7399747-7399766 Msa0191750:intron 35.0%
TTCTCGAAGAACTTACGTAA+GGG + chr2_1:7399748-7399767 Msa0191750:intron 35.0%
! TGAGCTTAACTTAGTTGGTA+AGG + chr2_1:7399976-7399995 Msa0191750:intron 35.0%
CATAATATATGCAAGGTCTG+AGG + chr2_1:7400005-7400024 Msa0191750:intron 35.0%
TCAGTGAATATGGTTGTTTG+AGG - chr2_1:7400037-7400056 None:intergenic 35.0%
!! TTGGTAAATGGACTAATGGT+AGG - chr2_1:7400100-7400119 None:intergenic 35.0%
TTAATGGTGTGCTTGGTAAA+TGG - chr2_1:7400112-7400131 None:intergenic 35.0%
! CAATGAAGAGTATGCATACA+AGG + chr2_1:7400186-7400205 Msa0191750:intron 35.0%
! CCTCTTTTCTGTTGTCAAAT+AGG - chr2_1:7400243-7400262 None:intergenic 35.0%
CCTATTTGACAACAGAAAAG+AGG + chr2_1:7400240-7400259 Msa0191750:intron 35.0%
! CTCTGGTTGATTCAATTGTT+CGG - chr2_1:7400329-7400348 None:intergenic 35.0%
CATAGTCGCCAAAAAAATGA+GGG + chr2_1:7400443-7400462 Msa0191750:CDS 35.0%
!!! GAAACTCTCCCTCATTTTTT+TGG - chr2_1:7400454-7400473 None:intergenic 35.0%
AAAAATGAGGGAGAGTTTCA+AGG + chr2_1:7400455-7400474 Msa0191750:CDS 35.0%
AAAATGAGGGAGAGTTTCAA+GGG + chr2_1:7400456-7400475 Msa0191750:CDS 35.0%
GGTAATTTCGTAGACTCATT+AGG - chr2_1:7400513-7400532 None:intergenic 35.0%
ACATGAAGATTATGATGCAC+TGG - chr2_1:7400534-7400553 None:intergenic 35.0%
AAAATCATTGCAAAGGCTGT+TGG + chr2_1:7400585-7400604 Msa0191750:CDS 35.0%
! TGTGAAGAATCGGCTTTAAT+GGG - chr2_1:7400648-7400667 None:intergenic 35.0%
! ATGTGAAGAATCGGCTTTAA+TGG - chr2_1:7400649-7400668 None:intergenic 35.0%
TTCCACAGAATGTGAAGAAT+CGG - chr2_1:7400658-7400677 None:intergenic 35.0%
!!! AGATTTTCTCCGTTTTGGTT+AGG + chr2_1:7400835-7400854 Msa0191750:three_prime_UTR 35.0%
!!! CGTTTTGGTTAGGTGTTTTT+TGG + chr2_1:7400845-7400864 Msa0191750:three_prime_UTR 35.0%
TTGGTGTAGTTTATTGAAGG+AGG + chr2_1:7400864-7400883 Msa0191750:three_prime_UTR 35.0%
TGTAGTTTATTGAAGGAGGA+AGG + chr2_1:7400868-7400887 Msa0191750:three_prime_UTR 35.0%
AATGAACTTGAGTTAGATGC+AGG + chr2_1:7400907-7400926 Msa0191750:three_prime_UTR 35.0%
GGTGAGGGATTCTATTTGTA+AGG - chr2_1:7389710-7389729 None:intergenic 40.0%
ATAGAGTAAGCGTGAGAAGA+GGG - chr2_1:7389733-7389752 None:intergenic 40.0%
AATAGAGTAAGCGTGAGAAG+AGG - chr2_1:7389734-7389753 None:intergenic 40.0%
! TCGGGAATGGTAGTTTTTGT+TGG - chr2_1:7389856-7389875 None:intergenic 40.0%
! TATTTTCCGGCGAGAATTTC+GGG - chr2_1:7389874-7389893 None:intergenic 40.0%
! CTATTTTCCGGCGAGAATTT+CGG - chr2_1:7389875-7389894 None:intergenic 40.0%
! ACGTGGGTATGTCTATTTTC+CGG - chr2_1:7389887-7389906 None:intergenic 40.0%
AAAATAAGGCTTACCGGTGT+CGG - chr2_1:7389926-7389945 None:intergenic 40.0%
AAATCAACCACCATCTTCTC+CGG - chr2_1:7389972-7389991 None:intergenic 40.0%
TAGGACAATCAATGCGTTCT+CGG - chr2_1:7390197-7390216 None:intergenic 40.0%
ATAGTACCTCAGGGGTAAAA+GGG - chr2_1:7390221-7390240 None:intergenic 40.0%
AATAGTACCTCAGGGGTAAA+AGG - chr2_1:7390222-7390241 None:intergenic 40.0%
GATCCTTATATTGTGCCCTA+AGG + chr2_1:7390767-7390786 Msa0191750:intron 40.0%
! AATGCTAACTTGTGCCCTTA+GGG - chr2_1:7390785-7390804 None:intergenic 40.0%
! AAATGCTAACTTGTGCCCTT+AGG - chr2_1:7390786-7390805 None:intergenic 40.0%
ATTCGTCAAACGTGTGAATG+CGG - chr2_1:7390937-7390956 None:intergenic 40.0%
GTTTGACGAATCTAGATCGT+TGG + chr2_1:7390946-7390965 Msa0191750:intron 40.0%
! TACACAAACCTTTGAGAGCA+TGG + chr2_1:7391076-7391095 Msa0191750:intron 40.0%
ATAGGATTCCATGCTCTCAA+AGG - chr2_1:7391087-7391106 None:intergenic 40.0%
ACCAATTGAGTTAAGCTCAC+CGG - chr2_1:7391760-7391779 None:intergenic 40.0%
GTGAGCTTAACTCAATTGGT+TGG + chr2_1:7391760-7391779 Msa0191750:intron 40.0%
ATCAGTATCCGATACGTATC+CGG - chr2_1:7393085-7393104 None:intergenic 40.0%
TATCGGATACTGATACTCCA+CGG + chr2_1:7393091-7393110 Msa0191750:intron 40.0%
GCAATGTTGTAAACATTCGG+TGG + chr2_1:7393276-7393295 Msa0191750:intron 40.0%
ATAGCTATGAAGCCCAGATA+CGG - chr2_1:7393588-7393607 None:intergenic 40.0%
!!! ACCGAAGACCTTTTTTGGTT+TGG - chr2_1:7394059-7394078 None:intergenic 40.0%
!!! CTTGTACCGAAGACCTTTTT+TGG - chr2_1:7394064-7394083 None:intergenic 40.0%
AAAAGGTCTTCGGTACAAGT+TGG + chr2_1:7394065-7394084 Msa0191750:intron 40.0%
AAAGGTCTTCGGTACAAGTT+GGG + chr2_1:7394066-7394085 Msa0191750:intron 40.0%
CCTAAATTCAAATCCGGACA+AGG - chr2_1:7394653-7394672 None:intergenic 40.0%
CCTTGTCCGGATTTGAATTT+AGG + chr2_1:7394650-7394669 Msa0191750:intron 40.0%
ACTAATGGTTAGGAAGTTGG+AGG - chr2_1:7394677-7394696 None:intergenic 40.0%
TGCGAAGAAGTGGAAAATCT+AGG + chr2_1:7395034-7395053 Msa0191750:intron 40.0%
GCGAAGAAGTGGAAAATCTA+GGG + chr2_1:7395035-7395054 Msa0191750:intron 40.0%
AGATCCATGGACGTTGATAT+GGG - chr2_1:7395073-7395092 None:intergenic 40.0%
AAGATCCATGGACGTTGATA+TGG - chr2_1:7395074-7395093 None:intergenic 40.0%
TACGTCCTGTAATTGCAACT+CGG - chr2_1:7395102-7395121 None:intergenic 40.0%
!!! ATTTTAGAGCGACGATTCAG+TGG + chr2_1:7395231-7395250 Msa0191750:intron 40.0%
TGTGAATAACAATTGCCAGG+TGG - chr2_1:7395289-7395308 None:intergenic 40.0%
! ACCTGGCAATTGTTATTCAC+AGG + chr2_1:7395288-7395307 Msa0191750:intron 40.0%
ACCTGTGAATAACAATTGCC+AGG - chr2_1:7395292-7395311 None:intergenic 40.0%
AAGACATGATCACTTGCACA+TGG + chr2_1:7395350-7395369 Msa0191750:intron 40.0%
TCACTTGCACATGGTCAATT+AGG + chr2_1:7395359-7395378 Msa0191750:intron 40.0%
TGGTAATCAGAAATGGCACA+TGG + chr2_1:7395451-7395470 Msa0191750:intron 40.0%
!!! TTGTTTCCTAGTTTTGGCGT+AGG + chr2_1:7395701-7395720 Msa0191750:intron 40.0%
TCATATCCTACGCCAAAACT+AGG - chr2_1:7395710-7395729 None:intergenic 40.0%
GATTTGCAACAACGGTATTC+TGG + chr2_1:7395862-7395881 Msa0191750:CDS 40.0%
!!! ATTTTTAGCCACTAGGCTAC+TGG - chr2_1:7395978-7395997 None:intergenic 40.0%
CAATTATTCACCTCAAAGGG+TGG - chr2_1:7396001-7396020 None:intergenic 40.0%
!! CACCCTTTGAGGTGAATAAT+TGG + chr2_1:7395999-7396018 Msa0191750:intron 40.0%
CCCCAATTATTCACCTCAAA+GGG - chr2_1:7396004-7396023 None:intergenic 40.0%
!! CCCTTTGAGGTGAATAATTG+GGG + chr2_1:7396001-7396020 Msa0191750:intron 40.0%
TCCCCAATTATTCACCTCAA+AGG - chr2_1:7396005-7396024 None:intergenic 40.0%
GTGAATAATTGGGGAATCTG+AGG + chr2_1:7396010-7396029 Msa0191750:intron 40.0%
TAGAAACTTGCGATATGCAG+GGG - chr2_1:7396047-7396066 None:intergenic 40.0%
GTAGAAACTTGCGATATGCA+GGG - chr2_1:7396048-7396067 None:intergenic 40.0%
CTCTATGAGCATAGCTCAAT+TGG - chr2_1:7396070-7396089 None:intergenic 40.0%
GATGGTAAAATTGCAATGCC+AGG + chr2_1:7396187-7396206 Msa0191750:intron 40.0%
!!! TGCCAGGGATTTTTTGTATG+AGG + chr2_1:7396203-7396222 Msa0191750:intron 40.0%
CTCCTCATACAAAAAATCCC+TGG - chr2_1:7396208-7396227 None:intergenic 40.0%
! GCGATCCAATGAGTTTTCAT+TGG - chr2_1:7396548-7396567 None:intergenic 40.0%
! TGGTTTAGAGTTCACAGTTC+TGG - chr2_1:7396746-7396765 None:intergenic 40.0%
TGCACACTACACACTGTAAA+AGG - chr2_1:7396781-7396800 None:intergenic 40.0%
ATCTTGTGTCCGTTTCATCA+CGG + chr2_1:7396811-7396830 Msa0191750:intron 40.0%
CTTATCCTACCGTGATGAAA+CGG - chr2_1:7396823-7396842 None:intergenic 40.0%
TGTGAAGGTAAATGTGATGC+TGG - chr2_1:7397048-7397067 None:intergenic 40.0%
ACTCTCTCCAATTTCTGTGA+AGG - chr2_1:7397063-7397082 None:intergenic 40.0%
GAGAGTTAAATCTTCCACCA+AGG + chr2_1:7397077-7397096 Msa0191750:CDS 40.0%
GTTAAATCTTCCACCAAGGA+AGG + chr2_1:7397081-7397100 Msa0191750:CDS 40.0%
CGTTTCATGAGTGAAACTTC+CGG - chr2_1:7397115-7397134 None:intergenic 40.0%
GAAGTTTCACTCATGAAACG+AGG + chr2_1:7397115-7397134 Msa0191750:CDS 40.0%
AGGCTTAGTCTCGTTATCAT+CGG - chr2_1:7397181-7397200 None:intergenic 40.0%
AGTTTCACAATCTACTGAGC+AGG + chr2_1:7397203-7397222 Msa0191750:CDS 40.0%
ATCAAAGCTTGAAGTCCTCA+AGG + chr2_1:7397239-7397258 Msa0191750:CDS 40.0%
TATCCTTCTTCTCAACCTTG+AGG - chr2_1:7397257-7397276 None:intergenic 40.0%
TGGGAAGGTAAATGTGATAC+GGG - chr2_1:7397312-7397331 None:intergenic 40.0%
CTGGGAAGGTAAATGTGATA+CGG - chr2_1:7397313-7397332 None:intergenic 40.0%
GAGAGTTAAATCTTCCACCA+AGG + chr2_1:7397077-7397096 Msa0191750:CDS 40.0%
CATTTCGTGAGTGAAACTTC+CGG - chr2_1:7397391-7397410 None:intergenic 40.0%
GAAGTTTCACTCACGAAATG+AGG + chr2_1:7397391-7397410 Msa0191750:CDS 40.0%
GTTTCGTTATTATCGGCAGA+TGG - chr2_1:7397450-7397469 None:intergenic 40.0%
! AGTTTTGCAATCTACTGAGC+AGG + chr2_1:7397479-7397498 Msa0191750:CDS 40.0%
! TGCGAAGGTACATGTGATAT+GGG - chr2_1:7397588-7397607 None:intergenic 40.0%
ACATGTACCTTCGCAGAAAT+TGG + chr2_1:7397593-7397612 Msa0191750:CDS 40.0%
! CGTTTTGTGAGTGAAACTTC+CGG - chr2_1:7397667-7397686 None:intergenic 40.0%
GAAGTTTCACTCACAAAACG+AGG + chr2_1:7397667-7397686 Msa0191750:CDS 40.0%
AGGCTTAGTCTCGTTATCAT+CGG - chr2_1:7397181-7397200 None:intergenic 40.0%
TCGGTAGATTGCAAAACTTC+AGG - chr2_1:7397753-7397772 None:intergenic 40.0%
ATCAAAGCTTGAAGTCCTCA+AGG + chr2_1:7397239-7397258 Msa0191750:CDS 40.0%
TGGGATGGTAAATGTGATAC+TGG - chr2_1:7397864-7397883 None:intergenic 40.0%
TGTTTCGTGTGTGAAACTTC+CGG - chr2_1:7397943-7397962 None:intergenic 40.0%
GAAGTTTCACACACGAAACA+AGG + chr2_1:7397943-7397962 Msa0191750:CDS 40.0%
AGGCTTAGTCTCGTTATCAT+CGG - chr2_1:7397181-7397200 None:intergenic 40.0%
AGTTTCACAATCTACTGAGC+AGG + chr2_1:7397203-7397222 Msa0191750:CDS 40.0%
ACCAAAGCTTGAATTCCTCA+TGG + chr2_1:7398067-7398086 Msa0191750:CDS 40.0%
TCCATGAGGAATTCAAGCTT+TGG - chr2_1:7398071-7398090 None:intergenic 40.0%
TCTCATTCTTCTCATCCATG+AGG - chr2_1:7398085-7398104 None:intergenic 40.0%
TGGGATGGTAAATGTGATAC+TGG - chr2_1:7397864-7397883 None:intergenic 40.0%
TTCCGCTAAAGAGACATCAA+AGG + chr2_1:7398181-7398200 Msa0191750:CDS 40.0%
GCTAAAGAGACATCAAAGGA+AGG + chr2_1:7398185-7398204 Msa0191750:CDS 40.0%
CAAAGGAAGGATTATCTGTC+GGG + chr2_1:7398198-7398217 Msa0191750:CDS 40.0%
GATGTCGTAAAAAACGGAGA+GGG + chr2_1:7398384-7398403 Msa0191750:CDS 40.0%
ATTCAGCTGATGTTATGTCC+TGG + chr2_1:7398477-7398496 Msa0191750:CDS 40.0%
AGTAGAACTTTCTTTACGCC+AGG - chr2_1:7398498-7398517 None:intergenic 40.0%
GTCTACATGAGCAGAAGATT+TGG - chr2_1:7398540-7398559 None:intergenic 40.0%
! GAACCTGAAAAAGCATAGCA+CGG + chr2_1:7398574-7398593 Msa0191750:CDS 40.0%
! GCCAGCATCAAAAGCTTTTA+TGG - chr2_1:7398737-7398756 None:intergenic 40.0%
AACGGTTAAAAGGACCTATG+TGG - chr2_1:7399114-7399133 None:intergenic 40.0%
GGAATGTGTGAAAAGGGTAA+CGG - chr2_1:7399132-7399151 None:intergenic 40.0%
! CCCTCTGAGAATTTGTACAT+TGG + chr2_1:7399288-7399307 Msa0191750:intron 40.0%
CCCAATGTACAAATTCTCAG+AGG - chr2_1:7399292-7399311 None:intergenic 40.0%
CTGAGAATTTGTACATTGGG+AGG + chr2_1:7399292-7399311 Msa0191750:intron 40.0%
GTACCCATAGAAGATGGAAA+TGG + chr2_1:7399407-7399426 Msa0191750:intron 40.0%
ACGCCATTTCCATCTTCTAT+GGG - chr2_1:7399413-7399432 None:intergenic 40.0%
AAAACCTTAAAGACCCAACC+AGG + chr2_1:7399570-7399589 Msa0191750:intron 40.0%
TGTGGATCATATGGAGAAGT+GGG - chr2_1:7399796-7399815 None:intergenic 40.0%
TTGTGGATCATATGGAGAAG+TGG - chr2_1:7399797-7399816 None:intergenic 40.0%
ACTAGTGGTTGTGGATCATA+TGG - chr2_1:7399805-7399824 None:intergenic 40.0%
CACAACCACTAGTAGACTAA+CGG + chr2_1:7399812-7399831 Msa0191750:intron 40.0%
! ATTTGCCGTTAGTCTACTAG+TGG - chr2_1:7399820-7399839 None:intergenic 40.0%
CCAACTAAGTTAAGCTCACA+AGG - chr2_1:7399974-7399993 None:intergenic 40.0%
CCTTGTGAGCTTAACTTAGT+TGG + chr2_1:7399971-7399990 Msa0191750:intron 40.0%
!! GTGCTTGGTAAATGGACTAA+TGG - chr2_1:7400104-7400123 None:intergenic 40.0%
ACATGGACTTCGACACTATA+AGG + chr2_1:7400289-7400308 Msa0191750:CDS 40.0%
GATCTTCGAGTAGAAGACTA+GGG - chr2_1:7400388-7400407 None:intergenic 40.0%
TGATCTTCGAGTAGAAGACT+AGG - chr2_1:7400389-7400408 None:intergenic 40.0%
AAAACTGCTCTCCTTCTAAG+AGG + chr2_1:7400420-7400439 Msa0191750:CDS 40.0%
GCATAGTCGCCAAAAAAATG+AGG + chr2_1:7400442-7400461 Msa0191750:CDS 40.0%
! AAACCAAGAAGTGTAAGACC+AGG + chr2_1:7400555-7400574 Msa0191750:CDS 40.0%
! GCAATGATTTTTCTGTTGCC+TGG - chr2_1:7400576-7400595 None:intergenic 40.0%
!!! GTCTTTTGACTTGAAGTCAC+AGG - chr2_1:7400729-7400748 None:intergenic 40.0%
! ACTCTTTTCCTTCCTTTCAC+TGG - chr2_1:7400759-7400778 None:intergenic 40.0%
AACTTGAGTTAGATGCAGGA+GGG + chr2_1:7400911-7400930 Msa0191750:three_prime_UTR 40.0%
TAGAGTAAGCGTGAGAAGAG+GGG - chr2_1:7389732-7389751 None:intergenic 45.0%
! AAAACCGGTTTCTCTGACGT+GGG - chr2_1:7389903-7389922 None:intergenic 45.0%
! TTTCTGTCTTTTCCGGTGAC+CGG + chr2_1:7389950-7389969 Msa0191750:intron 45.0%
AATAATCAGGGACGTACACG+TGG + chr2_1:7390073-7390092 Msa0191750:intron 45.0%
TGCCCTTAGGGCACAATATA+AGG - chr2_1:7390773-7390792 None:intergenic 45.0%
TCCGGTGAGCTTAACTCAAT+TGG + chr2_1:7391756-7391775 Msa0191750:intron 45.0%
TTAATCTGCCCGCAAAGTCT+CGG + chr2_1:7392141-7392160 Msa0191750:intron 45.0%
CTCGGACATCATTAGGGTTA+CGG - chr2_1:7392906-7392925 None:intergenic 45.0%
CAGTTGCTCGGACATCATTA+GGG - chr2_1:7392912-7392931 None:intergenic 45.0%
TCAGTTGCTCGGACATCATT+AGG - chr2_1:7392913-7392932 None:intergenic 45.0%
!!! GTCTCCATTTTGGAGTATCC+GGG - chr2_1:7393053-7393072 None:intergenic 45.0%
!!! CGTCTCCATTTTGGAGTATC+CGG - chr2_1:7393054-7393073 None:intergenic 45.0%
TATCCGATACGTATCCGGTA+CGG - chr2_1:7393080-7393099 None:intergenic 45.0%
TGATACTCCACGGATACTTG+CGG + chr2_1:7393101-7393120 Msa0191750:intron 45.0%
ATACCGGTACGATACGATAC+GGG - chr2_1:7393565-7393584 None:intergenic 45.0%
GATACCGGTACGATACGATA+CGG - chr2_1:7393566-7393585 None:intergenic 45.0%
!! ACTAGACCCTTTTGGTGTGT+AGG - chr2_1:7394816-7394835 None:intergenic 45.0%
! GCATCTTCACTAGACCCTTT+TGG - chr2_1:7394824-7394843 None:intergenic 45.0%
CATTGGACGCACGTGTAAAT+TGG - chr2_1:7394861-7394880 None:intergenic 45.0%
GCACTATAAGTGCGAAGAAG+TGG + chr2_1:7395024-7395043 Msa0191750:intron 45.0%
TGGACGTTGATATGGGGATT+GGG - chr2_1:7395066-7395085 None:intergenic 45.0%
ATGGACGTTGATATGGGGAT+TGG - chr2_1:7395067-7395086 None:intergenic 45.0%
AATCCCCATATCAACGTCCA+TGG + chr2_1:7395066-7395085 Msa0191750:intron 45.0%
GATCCATGGACGTTGATATG+GGG - chr2_1:7395072-7395091 None:intergenic 45.0%
!! AACTCGGTTGGTAAGATCCA+TGG - chr2_1:7395086-7395105 None:intergenic 45.0%
ACCAACCGAGTTGCAATTAC+AGG + chr2_1:7395094-7395113 Msa0191750:intron 45.0%
TCCTGTAATTGCAACTCGGT+TGG - chr2_1:7395098-7395117 None:intergenic 45.0%
CTTGCACATGGTCAATTAGG+TGG + chr2_1:7395362-7395381 Msa0191750:intron 45.0%
!!! AGGGTGGATTTTTAGCCACT+AGG - chr2_1:7395985-7396004 None:intergenic 45.0%
GGCTAAAAATCCACCCTTTG+AGG + chr2_1:7395988-7396007 Msa0191750:intron 45.0%
GGTAGAAACTTGCGATATGC+AGG - chr2_1:7396049-7396068 None:intergenic 45.0%
AAGAAAGCTATTGAGCGCTC+TGG + chr2_1:7396255-7396274 Msa0191750:CDS 45.0%
!! AGCGCTCTGGAGATTCAATT+GGG + chr2_1:7396268-7396287 Msa0191750:CDS 45.0%
AGTGTGTAGTGTGCACTGTA+AGG + chr2_1:7396786-7396805 Msa0191750:intron 45.0%
CTCATGAAACGAGGACAAAC+TGG + chr2_1:7397124-7397143 Msa0191750:CDS 45.0%
! AAACTGGTTTCCTGAATCCC+AGG + chr2_1:7397140-7397159 Msa0191750:CDS 45.0%
AGTCCTCAAGGTTGAGAAGA+AGG + chr2_1:7397251-7397270 Msa0191750:CDS 45.0%
! ACTCTCTCCAATTTCTGGGA+AGG - chr2_1:7397327-7397346 None:intergenic 45.0%
TTCCACCAAGGAAACATCGA+AGG + chr2_1:7397353-7397372 Msa0191750:CDS 45.0%
ATCCTTCGATGTTTCCTTGG+TGG - chr2_1:7397358-7397377 None:intergenic 45.0%
ACCAAGGAAACATCGAAGGA+TGG + chr2_1:7397357-7397376 Msa0191750:CDS 45.0%
CTCACGAAATGAGGACAAAC+TGG + chr2_1:7397400-7397419 Msa0191750:CDS 45.0%
TCTCGTTCTTCTCAGCTTTG+AGG - chr2_1:7397533-7397552 None:intergenic 45.0%
! CTGCGAAGGTACATGTGATA+TGG - chr2_1:7397589-7397608 None:intergenic 45.0%
ACTCTCTCCAATTTCTGCGA+AGG - chr2_1:7397603-7397622 None:intergenic 45.0%
CTCACAAAACGAGGACAAAC+TGG + chr2_1:7397676-7397695 Msa0191750:CDS 45.0%
! AGTTTTGCAATCTACCGAGC+AGG + chr2_1:7397755-7397774 Msa0191750:CDS 45.0%
TTGCGAAACTTTAGCCTGCT+CGG - chr2_1:7397772-7397791 None:intergenic 45.0%
! ACTCTCTCCAATTTCTGGGA+TGG - chr2_1:7397327-7397346 None:intergenic 45.0%
CACACGAAACAAGGACAAAC+TGG + chr2_1:7397952-7397971 Msa0191750:CDS 45.0%
! ACTCTCACCAATTTCTGGGA+TGG - chr2_1:7398155-7398174 None:intergenic 45.0%
GGAGTTTCACACACGAAACA+AGG + chr2_1:7398219-7398238 Msa0191750:CDS 45.0%
CACACGAAACAAGGACAAAC+TGG + chr2_1:7397952-7397971 Msa0191750:CDS 45.0%
TTATCATCGGAAGATGCAGC+TGG - chr2_1:7398272-7398291 None:intergenic 45.0%
GGATGTCGTAAAAAACGGAG+AGG + chr2_1:7398383-7398402 Msa0191750:CDS 45.0%
AACGGAGAGGGAAGAGAAAA+AGG + chr2_1:7398396-7398415 Msa0191750:CDS 45.0%
GAGAGGGAAGAGAAAAAGGA+AGG + chr2_1:7398400-7398419 Msa0191750:CDS 45.0%
!!! CTTCCGTGCTATGCTTTTTC+AGG - chr2_1:7398580-7398599 None:intergenic 45.0%
!! TCTCTAGGGAGTGCTTGTTA+TGG + chr2_1:7398835-7398854 Msa0191750:intron 45.0%
! AGGGTCCTTAAAAGAGGTGT+AGG + chr2_1:7398868-7398887 Msa0191750:intron 45.0%
! GTCCTTAAAAGAGGTGTAGG+CGG + chr2_1:7398871-7398890 Msa0191750:intron 45.0%
! ATCCGCCTACACCTCTTTTA+AGG - chr2_1:7398876-7398895 None:intergenic 45.0%
GTACCTCTTTCTCATCTCCT+AGG + chr2_1:7399213-7399232 Msa0191750:intron 45.0%
ACACCTAGGAGATGAGAAAG+AGG - chr2_1:7399219-7399238 None:intergenic 45.0%
ATTGGGAGGTGAATACCTCT+GGG + chr2_1:7399306-7399325 Msa0191750:intron 45.0%
AATTGATTGTGTAGCCCCAG+AGG - chr2_1:7399324-7399343 None:intergenic 45.0%
!! CTAGAGGTACCCATAGAAGA+TGG + chr2_1:7399401-7399420 Msa0191750:intron 45.0%
CACGCCATTTCCATCTTCTA+TGG - chr2_1:7399414-7399433 None:intergenic 45.0%
ATGGAAATGGCGTGCACATA+CGG + chr2_1:7399420-7399439 Msa0191750:intron 45.0%
TGTACCTGGTTGGGTCTTTA+AGG - chr2_1:7399577-7399596 None:intergenic 45.0%
CGAAGAACTTACGTAAGGGT+CGG + chr2_1:7399752-7399771 Msa0191750:intron 45.0%
GAAGAACTTACGTAAGGGTC+GGG + chr2_1:7399753-7399772 Msa0191750:intron 45.0%
AAGAACTTACGTAAGGGTCG+GGG + chr2_1:7399754-7399773 Msa0191750:intron 45.0%
! CGTTAGTCTACTAGTGGTTG+TGG - chr2_1:7399814-7399833 None:intergenic 45.0%
TGGCAACTTAATGGTGTGCT+TGG - chr2_1:7400119-7400138 None:intergenic 45.0%
GAAAATGATCCAGCAGCACA+TGG + chr2_1:7400272-7400291 Msa0191750:CDS 45.0%
CAAGTCTCGGTATAGTTCTC+TGG - chr2_1:7400346-7400365 None:intergenic 45.0%
!! GTAGAAGACTAGGGCATTGT+TGG - chr2_1:7400379-7400398 None:intergenic 45.0%
!! TTGCCTGGTCTTACACTTCT+TGG - chr2_1:7400561-7400580 None:intergenic 45.0%
ATCATTGCAAAGGCTGTTGG+TGG + chr2_1:7400588-7400607 Msa0191750:CDS 45.0%
GACAACTCTGCATCTTCACA+AGG + chr2_1:7400612-7400631 Msa0191750:CDS 45.0%
! AGCCGATTCTTCACATTCTG+TGG + chr2_1:7400653-7400672 Msa0191750:CDS 45.0%
AAGACTGCAACACCAGTGAA+AGG + chr2_1:7400744-7400763 Msa0191750:CDS 45.0%
GAACTTGAGTTAGATGCAGG+AGG + chr2_1:7400910-7400929 Msa0191750:three_prime_UTR 45.0%
!!! TTTTTTTATATTTATATTGA+AGG - chr2_1:7392303-7392322 None:intergenic 5.0%
!!! ATTTTATTTATTGAAAATAT+TGG + chr2_1:7392589-7392608 Msa0191750:intron 5.0%
!!! ATATTTTAAATTATTTTTGT+AGG - chr2_1:7393884-7393903 None:intergenic 5.0%
!! TAATAATAATATAATAATAG+AGG - chr2_1:7395192-7395211 None:intergenic 5.0%
AGAGTAAGCGTGAGAAGAGG+GGG - chr2_1:7389731-7389750 None:intergenic 50.0%
ACCATTCCCGAAATTCTCGC+CGG + chr2_1:7389865-7389884 Msa0191750:five_prime_UTR 50.0%
CATACCCACGTCAGAGAAAC+CGG + chr2_1:7389896-7389915 Msa0191750:five_prime_UTR 50.0%
! GAAAACCGGTTTCTCTGACG+TGG - chr2_1:7389904-7389923 None:intergenic 50.0%
!! AGAAACCGGTTTTCCGACAC+CGG + chr2_1:7389910-7389929 Msa0191750:five_prime_UTR 50.0%
AATGCGTTCTCGGAGTTCAC+CGG - chr2_1:7390187-7390206 None:intergenic 50.0%
! TCCTATCCCTTTTACCCCTG+AGG + chr2_1:7390212-7390231 Msa0191750:CDS 50.0%
ACCTCAGGGGTAAAAGGGAT+AGG - chr2_1:7390216-7390235 None:intergenic 50.0%
TTTGGTCGTTGGATCAGGCT+CGG - chr2_1:7391037-7391056 None:intergenic 50.0%
AGAAGCTTCCGAGACTTTGC+GGG - chr2_1:7392152-7392171 None:intergenic 50.0%
CAGAAGCTTCCGAGACTTTG+CGG - chr2_1:7392153-7392172 None:intergenic 50.0%
GAAGCCCGGATACTCCAAAA+TGG + chr2_1:7393046-7393065 Msa0191750:intron 50.0%
! GTACGGGTACGTCTCCATTT+TGG - chr2_1:7393063-7393082 None:intergenic 50.0%
AAATGGAGACGTACCCGTAC+CGG + chr2_1:7393063-7393082 Msa0191750:intron 50.0%
TACCCGTACCGGATACGTAT+CGG + chr2_1:7393074-7393093 Msa0191750:intron 50.0%
ATCCGATACGTATCCGGTAC+GGG - chr2_1:7393079-7393098 None:intergenic 50.0%
CGATACTCCGCAGATACACA+AGG + chr2_1:7393192-7393211 Msa0191750:intron 50.0%
GTACCCGTATCGTATCGTAC+CGG + chr2_1:7393559-7393578 Msa0191750:intron 50.0%
! ATCGTACCGGTATCCGTATC+TGG + chr2_1:7393572-7393591 Msa0191750:intron 50.0%
! TCGTACCGGTATCCGTATCT+GGG + chr2_1:7393573-7393592 Msa0191750:intron 50.0%
TGAAGCCCAGATACGGATAC+CGG - chr2_1:7393581-7393600 None:intergenic 50.0%
! TTCGGTACAAGTTGGGCCTT+AGG + chr2_1:7394073-7394092 Msa0191750:intron 50.0%
CAAGGTGACGTGTCCAATGA+TGG - chr2_1:7394889-7394908 None:intergenic 50.0%
GGACGTTGATATGGGGATTG+GGG - chr2_1:7395065-7395084 None:intergenic 50.0%
CACTAATGTTGGCATCCACC+TGG + chr2_1:7395271-7395290 Msa0191750:intron 50.0%
!! GAGCGCTCTGGAGATTCAAT+TGG + chr2_1:7396267-7396286 Msa0191750:CDS 50.0%
TGTGTCCGTTTCATCACGGT+AGG + chr2_1:7396815-7396834 Msa0191750:intron 50.0%
CCTCATTCTTCTCAGCCTCA+AGG - chr2_1:7396993-7397012 None:intergenic 50.0%
CCTTGAGGCTGAGAAGAATG+AGG + chr2_1:7396990-7397009 Msa0191750:CDS 50.0%
GAGTGAAACTTCCGGCAGAT+AGG - chr2_1:7397107-7397126 None:intergenic 50.0%
GCCATCCTTCGATGTTTCCT+TGG - chr2_1:7397361-7397380 None:intergenic 50.0%
GAGTGAAACTTCCGGCAGAT+AGG - chr2_1:7397107-7397126 None:intergenic 50.0%
! AAACTGGTCTCCTGAATCCC+AGG + chr2_1:7397416-7397435 Msa0191750:CDS 50.0%
TCAAAGGATGGCCTATCTGC+CGG + chr2_1:7397645-7397664 Msa0191750:CDS 50.0%
GAGTGAAACTTCCGGCAGAT+AGG - chr2_1:7397107-7397126 None:intergenic 50.0%
TCAAAGGATGGCCTATCTGC+CGG + chr2_1:7397645-7397664 Msa0191750:CDS 50.0%
GTGTGAAACTTCCGGCAGAT+AGG - chr2_1:7397935-7397954 None:intergenic 50.0%
! AAACTGGTCTCCTGAATCCC+AGG + chr2_1:7397416-7397435 Msa0191750:CDS 50.0%
! AAACTGGTCTCCTGAATCCC+AGG + chr2_1:7397416-7397435 Msa0191750:CDS 50.0%
ACCATCAAGTCTTCGACGGA+AGG - chr2_1:7398651-7398670 None:intergenic 50.0%
CCTGACCATCAAGTCTTCGA+CGG - chr2_1:7398655-7398674 None:intergenic 50.0%
CATTGGGAGGTGAATACCTC+TGG + chr2_1:7399305-7399324 Msa0191750:intron 50.0%
TTGGGAGGTGAATACCTCTG+GGG + chr2_1:7399307-7399326 Msa0191750:intron 50.0%
TGGTGAGTAGCAGCAAGTCT+CGG - chr2_1:7400359-7400378 None:intergenic 50.0%
TGGCGACTATGCCTCTTAGA+AGG - chr2_1:7400434-7400453 None:intergenic 50.0%
CTGCAACACCAGTGAAAGGA+AGG + chr2_1:7400748-7400767 Msa0191750:CDS 50.0%
TCCGGCGAGAATTTCGGGAA+TGG - chr2_1:7389869-7389888 None:intergenic 55.0%
! GCTTACCGGTGTCGGAAAAC+CGG - chr2_1:7389918-7389937 None:intergenic 55.0%
TTTCCGGTGACCGGAGAAGA+TGG + chr2_1:7389959-7389978 Msa0191750:intron 55.0%
ATCAGGGACGTACACGTGGA+CGG + chr2_1:7390077-7390096 Msa0191750:intron 55.0%
ACGTACACGTGGACGGTGAT+GGG + chr2_1:7390084-7390103 Msa0191750:exon 55.0%
!! GTGGACGGTGATGGGTAGAT+GGG + chr2_1:7390092-7390111 Msa0191750:exon 55.0%
!! TGGACGGTGATGGGTAGATG+GGG + chr2_1:7390093-7390112 Msa0191750:exon 55.0%
! TGATGGGTAGATGGGGGACA+TGG + chr2_1:7390100-7390119 Msa0191750:exon 55.0%
GATGGGTAGATGGGGGACAT+GGG + chr2_1:7390101-7390120 Msa0191750:exon 55.0%
GTCCGAGCAACTGAGCTAAG+CGG + chr2_1:7392919-7392938 Msa0191750:intron 55.0%
TCCGAGCAACTGAGCTAAGC+GGG + chr2_1:7392920-7392939 Msa0191750:intron 55.0%
TCCCGCTTAGCTCAGTTGCT+CGG - chr2_1:7392924-7392943 None:intergenic 55.0%
TGCGTATCCGCAAGTATCCG+TGG - chr2_1:7393111-7393130 None:intergenic 55.0%
ACCAAGGAAGGCCTATCTGC+CGG + chr2_1:7397093-7397112 Msa0191750:CDS 55.0%
TTATCATCGGCAGACGCAGC+TGG - chr2_1:7397168-7397187 None:intergenic 55.0%
TCGAAGGATGGCCTATCTGC+CGG + chr2_1:7397369-7397388 Msa0191750:CDS 55.0%
! GGCGTTGAAACCTGGGATTC+AGG - chr2_1:7397429-7397448 None:intergenic 55.0%
! GGCAGATGGCGTTGAAACCT+GGG - chr2_1:7397436-7397455 None:intergenic 55.0%
! ACGAGGACAAACTGGTCTCC+TGG + chr2_1:7397684-7397703 Msa0191750:CDS 55.0%
! AAACTGGTCTCCTGGATCCC+AGG + chr2_1:7397692-7397711 Msa0191750:CDS 55.0%
TTATCATCGGCAGATGCCGC+TGG - chr2_1:7397720-7397739 None:intergenic 55.0%
TCTCATTCTGCTCGGCCTTG+AGG - chr2_1:7397809-7397828 None:intergenic 55.0%
TTATCATCGGCAGACGCAGC+TGG - chr2_1:7397168-7397187 None:intergenic 55.0%
GGAAGATGCAGCTGGAACCT+GGG - chr2_1:7398264-7398283 None:intergenic 55.0%
GCCTTCCGTCGAAGACTTGA+TGG + chr2_1:7398647-7398666 Msa0191750:CDS 55.0%
! CCGTCGAAGACTTGATGGTC+AGG + chr2_1:7398652-7398671 Msa0191750:CDS 55.0%
TGGCGTGCACATACGGTAAG+TGG + chr2_1:7399427-7399446 Msa0191750:intron 55.0%
TGTCGAAGTCCATGTGCTGC+TGG - chr2_1:7400284-7400303 None:intergenic 55.0%
AGCGTGAGAAGAGGGGGTGA+GGG - chr2_1:7389725-7389744 None:intergenic 60.0%
AAGCGTGAGAAGAGGGGGTG+AGG - chr2_1:7389726-7389745 None:intergenic 60.0%
CCACCATCTTCTCCGGTCAC+CGG - chr2_1:7389965-7389984 None:intergenic 60.0%
GACGTACACGTGGACGGTGA+TGG + chr2_1:7390083-7390102 Msa0191750:exon 60.0%
!! CGTGGACGGTGATGGGTAGA+TGG + chr2_1:7390091-7390110 Msa0191750:exon 60.0%
!! GGACGGTGATGGGTAGATGG+GGG + chr2_1:7390094-7390113 Msa0191750:exon 60.0%
ACATGGGAGGAGCTCCTCCT+TGG + chr2_1:7390117-7390136 Msa0191750:CDS 60.0%
! TCCTTGGTGGGGCGGTTTTC+CGG + chr2_1:7390133-7390152 Msa0191750:CDS 60.0%
TCCAGTCTCGTGTCCCGTAC+CGG - chr2_1:7390155-7390174 None:intergenic 60.0%
GGCAGATAGGCCTTCCTTGG+TGG - chr2_1:7397094-7397113 None:intergenic 60.0%
TCCGGCAGATAGGCCTTCCT+TGG - chr2_1:7397097-7397116 None:intergenic 60.0%
GCAGCTGGAACCTGGGATTC+AGG - chr2_1:7397153-7397172 None:intergenic 60.0%
! CGGCAGATGGCGTTGAAACC+TGG - chr2_1:7397437-7397456 None:intergenic 60.0%
TCCTGGATCCCAGGTTCCAG+CGG + chr2_1:7397701-7397720 Msa0191750:CDS 60.0%
GCAGCTGGAACCTGGGATTC+AGG - chr2_1:7397153-7397172 None:intergenic 60.0%
GCAGCTGGAACCTGGGATTC+AGG - chr2_1:7397153-7397172 None:intergenic 60.0%
CGGAAGATGCAGCTGGAACC+TGG - chr2_1:7398265-7398284 None:intergenic 60.0%
CCGGTGACCGGAGAAGATGG+TGG + chr2_1:7389962-7389981 Msa0191750:intron 65.0%
GGGTAGATGGGGGACATGGG+AGG + chr2_1:7390104-7390123 Msa0191750:CDS 65.0%
TGGGAGGAGCTCCTCCTTGG+TGG + chr2_1:7390120-7390139 Msa0191750:CDS 65.0%
GGGAGGAGCTCCTCCTTGGT+GGG + chr2_1:7390121-7390140 Msa0191750:CDS 65.0%
GGAGGAGCTCCTCCTTGGTG+GGG + chr2_1:7390122-7390141 Msa0191750:CDS 65.0%
GGAAAACCGCCCCACCAAGG+AGG - chr2_1:7390134-7390153 None:intergenic 65.0%
ACCGGAAAACCGCCCCACCA+AGG - chr2_1:7390137-7390156 None:intergenic 65.0%
! GGTGGGGCGGTTTTCCGGTA+CGG + chr2_1:7390138-7390157 Msa0191750:CDS 65.0%
! GTGGGGCGGTTTTCCGGTAC+GGG + chr2_1:7390139-7390158 Msa0191750:CDS 65.0%
TCCGGTACGGGACACGAGAC+TGG + chr2_1:7390151-7390170 Msa0191750:CDS 65.0%
CGAGACTGGAACGTCGTCGC+CGG + chr2_1:7390165-7390184 Msa0191750:CDS 65.0%
GGCAGACGCAGCTGGAACCT+GGG - chr2_1:7397160-7397179 None:intergenic 65.0%
GGCAGATGCCGCTGGAACCT+GGG - chr2_1:7397712-7397731 None:intergenic 65.0%
GGCAGACGCAGCTGGAACCT+GGG - chr2_1:7397160-7397179 None:intergenic 65.0%
GGAGCTCCTCCTTGGTGGGG+CGG + chr2_1:7390125-7390144 Msa0191750:CDS 70.0%
CGGCAGACGCAGCTGGAACC+TGG - chr2_1:7397161-7397180 None:intergenic 70.0%
GCCGCTGGAACCTGGGATCC+AGG - chr2_1:7397705-7397724 None:intergenic 70.0%
CGGCAGATGCCGCTGGAACC+TGG - chr2_1:7397713-7397732 None:intergenic 70.0%
CGGCAGACGCAGCTGGAACC+TGG - chr2_1:7397161-7397180 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 7389674 7401102 7389674 ID=Msa0191750;Name=Msa0191750
chr2_1 mRNA 7389674 7401102 7389674 ID=Msa0191750-mRNA-1;Parent=Msa0191750;Name=Msa0191750-mRNA-1;_AED=0.01;_eAED=0.01;_QI=278|1|0.83|1|0.8|0.66|6|311|835
chr2_1 exon 7389674 7389931 7389674 ID=Msa0191750-mRNA-1:exon:3411;Parent=Msa0191750-mRNA-1
chr2_1 exon 7390082 7390233 7390082 ID=Msa0191750-mRNA-1:exon:3412;Parent=Msa0191750-mRNA-1
chr2_1 exon 7395841 7395890 7395841 ID=Msa0191750-mRNA-1:exon:3413;Parent=Msa0191750-mRNA-1
chr2_1 exon 7396209 7396289 7396209 ID=Msa0191750-mRNA-1:exon:3414;Parent=Msa0191750-mRNA-1
chr2_1 exon 7396966 7398673 7396966 ID=Msa0191750-mRNA-1:exon:3415;Parent=Msa0191750-mRNA-1
chr2_1 exon 7400255 7401102 7400255 ID=Msa0191750-mRNA-1:exon:3416;Parent=Msa0191750-mRNA-1
chr2_1 five_prime_UTR 7389674 7389931 7389674 ID=Msa0191750-mRNA-1:five_prime_utr;Parent=Msa0191750-mRNA-1
chr2_1 five_prime_UTR 7390082 7390101 7390082 ID=Msa0191750-mRNA-1:five_prime_utr;Parent=Msa0191750-mRNA-1
chr2_1 CDS 7390102 7390233 7390102 ID=Msa0191750-mRNA-1:cds;Parent=Msa0191750-mRNA-1
chr2_1 CDS 7395841 7395890 7395841 ID=Msa0191750-mRNA-1:cds;Parent=Msa0191750-mRNA-1
chr2_1 CDS 7396209 7396289 7396209 ID=Msa0191750-mRNA-1:cds;Parent=Msa0191750-mRNA-1
chr2_1 CDS 7396966 7398673 7396966 ID=Msa0191750-mRNA-1:cds;Parent=Msa0191750-mRNA-1
chr2_1 CDS 7400255 7400791 7400255 ID=Msa0191750-mRNA-1:cds;Parent=Msa0191750-mRNA-1
chr2_1 three_prime_UTR 7400792 7401102 7400792 ID=Msa0191750-mRNA-1:three_prime_utr;Parent=Msa0191750-mRNA-1
Gene Sequence

>Msa0191750

ATGGGTAGATGGGGGACATGGGAGGAGCTCCTCCTTGGTGGGGCGGTTTTCCGGTACGGGACACGAGACTGGAACGTCGTCGCCGGTGAACTCCGAGAACGCATTGATTGTCCTATCCCTTTTACCCCTGAGGTCTGTAAAGCTAAGTATGAAGATTTGCAACAACGGTATTCTGGGAGCACGGATTTTTTGTATGAGGAGCTTAGGAAAAGAAGAGTAGAAGAGCTAAAGAAAGCTATTGAGCGCTCTGGAGATTCAATTGGGTCTCTTAAATCAAAGATTGAAGACCTTGAGGCTGAGAAGAATGAGGAAAAAGATGATTGTGAAAATGGCTTAGAAATTCCAGCATCACATTTACCTTCACAGAAATTGGAGAGAGTTAAATCTTCCACCAAGGAAGGCCTATCTGCCGGAAGTTTCACTCATGAAACGAGGACAAACTGGTTTCCTGAATCCCAGGTTCCAGCTGCGTCTGCCGATGATAACGAGACTAAGCCTGAAGTTTCACAATCTACTGAGCAGGATAAAGTTTCGCAATCAAAGCTTGAAGTCCTCAAGGTTGAGAAGAAGGATAAAAATCATGACTGTGAAAATGGCTTAGAAAGTCCCGTATCACATTTACCTTCCCAGAAATTGGAGAGAGTTAAATCTTCCACCAAGGAAACATCGAAGGATGGCCTATCTGCCGGAAGTTTCACTCACGAAATGAGGACAAACTGGTCTCCTGAATCCCAGGTTTCAACGCCATCTGCCGATAATAACGAAACTAAGCTTGAAGTTTTGCAATCTACTGAGCAGGCTGAAGTTTTGCAATCAAAGCTTGAAGTCCTCAAAGCTGAGAAGAACGAGAAAAAACATGGTTGTGAAAATGGCTTAGAAAGTCCCATATCACATGTACCTTCGCAGAAATTGGAGAGAGTTAAATCTTGCACTAAAGAAACATCAAAGGATGGCCTATCTGCCGGAAGTTTCACTCACAAAACGAGGACAAACTGGTCTCCTGGATCCCAGGTTCCAGCGGCATCTGCCGATGATAACGAGACTAAGCCTGAAGTTTTGCAATCTACCGAGCAGGCTAAAGTTTCGCAATCAAAGCTTGAAGTCCTCAAGGCCGAGCAGAATGAGAAAAAAGATGATTGTGAAAATGGCTTAGAAAGTCCAGTATCACATTTACCATCCCAGAAATTGGAGAGAGTTAAAACTTCCACTAAAGAAACATCAAAGGATGGCCTATCTGCCGGAAGTTTCACACACGAAACAAGGACAAACTGGTCTCCTGAATCCCAGGTTCCAGCTGCGTCTGCCGATGATAACGAGACTAAGCCTGAAGTTTCACAATCTACTGAGCAGGATAAAGTTTCGCGACCAAAGCTTGAATTCCTCATGGATGAGAAGAATGAGAAAAAAGATGATTGTGAAAATGGCTTAGAAAGTCCAGTATCACATTTACCATCCCAGAAATTGGTGAGAGTTGAATCTTCCGCTAAAGAGACATCAAAGGAAGGATTATCTGTCGGGAGTTTCACACACGAAACAAGGACAAACTGGTCTCCTGAATCCCAGGTTCCAGCTGCATCTTCCGATGATAATGAAACTAAGCCAGAAGTTTCACATTCTACTAAGCAGGCTAAAGTTTTGAATGGAGATAATTTGGAACTTACTTTATATGAAATACAAGTAGGATGTCGTAAAAAACGGAGAGGGAAGAGAAAAAGGAAGGATTGTGGAAGAAATATTATGGAAGTGGCAAGTCTAGAAGAAAGTGATGTATTAGATTCAGCTGATGTTATGTCCTGGCGTAAAGAAAGTTCTACTAGTAACTGTTGTGAAGTTGCCAAATCTTCTGCTCATGTAGACAATAAAAAAAGTAAGAACCTGAAAAAGCATAGCACGGAAGATATGATTAAGATTTTAGATTCTATTTTTGAAACTGAAGGTGCATCTGCCTTCCGTCGAAGACTTGATGGTCAGAAAAGAGGAAAGTACAAGAAAATGATCCAGCAGCACATGGACTTCGACACTATAAGGTCAAGAATTAGCAGCCGAACAATTGAATCAACCAGAGAACTATACCGAGACTTGCTGCTACTCACCAACAATGCCCTAGTCTTCTACTCGAAGATCACTCGTGAATATAAAACTGCTCTCCTTCTAAGAGGCATAGTCGCCAAAAAAATGAGGGAGAGTTTCAAGGGTAGTACTAGTAGCAGCAACAAAGTCACTGAGCCTAATGAGTCTACGAAATTACCAGTGCATCATAATCTTCATGTGAAACCAAGAAGTGTAAGACCAGGCAACAGAAAAATCATTGCAAAGGCTGTTGGTGGCGACAACTCTGCATCTTCACAAGGAGCTAAGAAGCCCATTAAAGCCGATTCTTCACATTCTGTGGAATCCTTAAATGTCATGAAGAAAGCTTTTGGTAGACAGAAAAAAGTCGGACCTGTGACTTCAAGTCAAAAGACTGCAACACCAGTGAAAGGAAGGAAAAGAGTTAGAACAAAGTAG
Protein sequence

>Msa0191750

MGRWGTWEELLLGGAVFRYGTRDWNVVAGELRERIDCPIPFTPEVCKAKYEDLQQRYSGSTDFLYEELRKRRVEELKKAIERSGDSIGSLKSKIEDLEAEKNEEKDDCENGLEIPASHLPSQKLERVKSSTKEGLSAGSFTHETRTNWFPESQVPAASADDNETKPEVSQSTEQDKVSQSKLEVLKVEKKDKNHDCENGLESPVSHLPSQKLERVKSSTKETSKDGLSAGSFTHEMRTNWSPESQVSTPSADNNETKLEVLQSTEQAEVLQSKLEVLKAEKNEKKHGCENGLESPISHVPSQKLERVKSCTKETSKDGLSAGSFTHKTRTNWSPGSQVPAASADDNETKPEVLQSTEQAKVSQSKLEVLKAEQNEKKDDCENGLESPVSHLPSQKLERVKTSTKETSKDGLSAGSFTHETRTNWSPESQVPAASADDNETKPEVSQSTEQDKVSRPKLEFLMDEKNEKKDDCENGLESPVSHLPSQKLVRVESSAKETSKEGLSVGSFTHETRTNWSPESQVPAASSDDNETKPEVSHSTKQAKVLNGDNLELTLYEIQVGCRKKRRGKRKRKDCGRNIMEVASLEESDVLDSADVMSWRKESSTSNCCEVAKSSAHVDNKKSKNLKKHSTEDMIKILDSIFETEGASAFRRRLDGQKRGKYKKMIQQHMDFDTIRSRISSRTIESTRELYRDLLLLTNNALVFYSKITREYKTALLLRGIVAKKMRESFKGSTSSSNKVTEPNESTKLPVHHNLHVKPRSVRPGNRKIIAKAVGGDNSASSQGAKKPIKADSSHSVESLNVMKKAFGRQKKVGPVTSSQKTATPVKGRKRVRTK*