AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1404120

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1404120 MtrunA17_Chr2g0281431 86.781 817 95 5 1 810 1 811 0.0 1350
Msa1404120 MtrunA17_Chr4g0047931 51.860 457 185 13 363 807 95 528 8.74e-110 347
Msa1404120 MtrunA17_Chr4g0047931 57.483 294 109 7 4 288 9 295 6.18e-89 291
Msa1404120 MtrunA17_Chr4g0047931 54.054 185 82 2 179 361 95 278 6.82e-43 164
Msa1404120 MtrunA17_Chr2g0308521 30.660 212 115 8 4 191 21 224 1.43e-13 74.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1404120 AT1G61215.1 50.625 160 70 4 4 156 14 171 2.44e-34 138
Msa1404120 AT1G61215.1 40.964 249 114 10 492 730 137 362 1.65e-31 129
Msa1404120 AT1G61215.2 40.964 249 114 10 492 730 118 343 6.42e-32 130
Msa1404120 AT1G61215.2 43.333 120 60 3 44 156 34 152 5.93e-15 78.6
Msa1404120 AT2G42150.1 40.367 109 54 1 4 101 16 124 5.25e-15 79.7
Msa1404120 AT2G42150.1 35.849 106 65 2 665 767 304 409 7.06e-11 66.2
Msa1404120 AT3G60110.1 34.921 126 61 2 4 110 52 175 1.06e-13 75.5
Msa1404120 AT3G57980.2 40.000 115 52 2 4 101 16 130 8.52e-13 72.4
Msa1404120 AT3G57980.1 40.000 115 52 2 4 101 16 130 8.57e-13 72.4
Msa1404120 AT2G44430.1 34.307 137 55 3 4 105 50 186 4.36e-11 67.0

Find 214 sgRNAs with CRISPR-Local

Find 669 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTTCTTCTTCATGACATTTA+AGG 0.075082 tig0023028:+1296 None:intergenic
ATTTAACTCTCTCCAATTTC+TGG 0.116999 tig0023028:+4645 None:intergenic
ATTCAACTCTCACCAATTTC+TGG 0.140644 tig0023028:+3817 None:intergenic
CATTTAACCTAATTCTAAAA+TGG 0.144620 tig0023028:-2598 Msa1404120:CDS
ACATTTACCTTCACAGAAAT+TGG 0.178276 tig0023028:-4921 Msa1404120:CDS
AACGGAGAGGGAAGAGAAAA+AGG 0.204707 tig0023028:-3578 Msa1404120:CDS
TTGCCTGGTCTTACACTTCT+TGG 0.213585 tig0023028:+1417 None:intergenic
ACATTTACCTTCCCAGAAAT+TGG 0.213715 tig0023028:-4657 Msa1404120:CDS
GATTTGCAACAACGGTATTC+TGG 0.224102 tig0023028:-6112 Msa1404120:CDS
AATAGTACCTCAGGGGTAAA+AGG 0.234659 tig0023028:+11761 None:intergenic
ACATTTACCATCCCAGAAAT+TGG 0.247654 tig0023028:-4105 Msa1404120:CDS
CACGCCATTTCCATCTTCTA+TGG 0.257014 tig0023028:+2564 None:intergenic
ACATTTACCATCCCAGAAAT+TGG 0.267489 tig0023028:-3829 Msa1404120:CDS
ATGTGAAGAATCGGCTTTAA+TGG 0.268812 tig0023028:+1329 None:intergenic
ACATGTACCTTCGCAGAAAT+TGG 0.269177 tig0023028:-4381 Msa1404120:CDS
CTGCGAAGGTACATGTGATA+TGG 0.292733 tig0023028:+4388 None:intergenic
GATAATAAACTTATCCATAT+TGG 0.300905 tig0023028:+989 None:intergenic
AAGCTTAGTTTCGTTATTAT+CGG 0.303151 tig0023028:+4520 None:intergenic
CGTGGACGGTGATGGGTAGA+TGG 0.303874 tig0023028:-11889 Msa1404120:exon
GGCGTTGAAACCTGGGATTC+AGG 0.314819 tig0023028:+4548 None:intergenic
CGGCAGATGGCGTTGAAACC+TGG 0.327929 tig0023028:+4540 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.328172 tig0023028:+3720 None:intergenic
TTAGTAGAATGTGAAACTTC+TGG 0.329727 tig0023028:+3672 None:intergenic
TAGAATTAGGTTAAATGGTT+TGG 0.334067 tig0023028:+2604 None:intergenic
GCCTTCCGTCGAAGACTTGA+TGG 0.337126 tig0023028:-3328 Msa1404120:CDS
GGTAATTTCGTAGACTCATT+AGG 0.339504 tig0023028:+1465 None:intergenic
CGGCAGATGCCGCTGGAACC+TGG 0.342790 tig0023028:+4264 None:intergenic
CGGCAGACGCAGCTGGAACC+TGG 0.344074 tig0023028:+3988 None:intergenic
CGGCAGACGCAGCTGGAACC+TGG 0.344074 tig0023028:+4816 None:intergenic
GTCTACATGAGCAGAAGATT+TGG 0.347205 tig0023028:+3437 None:intergenic
CTCTGGTTGATTCAATTGTT+CGG 0.351506 tig0023028:+1649 None:intergenic
AAAGTTATAGTTAACCAATA+TGG 0.363318 tig0023028:-1003 Msa1404120:three_prime_UTR
TCTCGTTCTTCTCAGCTTTG+AGG 0.365599 tig0023028:+4444 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.367686 tig0023028:+3996 None:intergenic
GCAGCTGGAACCTGGGATTC+AGG 0.367686 tig0023028:+4824 None:intergenic
TGTCATGAAGAAGAAGCTTT+TGG 0.368198 tig0023028:-1289 Msa1404120:CDS
ATCCTTTGATGTTTCTTTAG+TGG 0.371469 tig0023028:+4067 None:intergenic
TGGGAGGAGCTCCTCCTTGG+TGG 0.373960 tig0023028:-11860 Msa1404120:CDS
GAGCGCTCTGGAGATTCAAT+TGG 0.376339 tig0023028:-5707 Msa1404120:CDS
GGATTGTGGAAGAAATATTA+TGG 0.379577 tig0023028:-3553 Msa1404120:CDS
TGGCGACTATGCCTCTTAGA+AGG 0.380669 tig0023028:+1544 None:intergenic
TCCGGTACGGGACACGAGAC+TGG 0.380957 tig0023028:-11829 Msa1404120:CDS
ACATGGGAGGAGCTCCTCCT+TGG 0.388138 tig0023028:-11863 Msa1404120:CDS
TGTGAAGAATCGGCTTTAAT+GGG 0.388925 tig0023028:+1330 None:intergenic
CGGAAGATGCAGCTGGAACC+TGG 0.391729 tig0023028:+3712 None:intergenic
TCAGTAGATTGTGAAACTTC+AGG 0.392693 tig0023028:+3948 None:intergenic
TCAGTAGATTGTGAAACTTC+AGG 0.392693 tig0023028:+4776 None:intergenic
ATTTAACCTAATTCTAAAAT+GGG 0.395434 tig0023028:-2597 Msa1404120:CDS
TTCAACTCTCACCAATTTCT+GGG 0.408744 tig0023028:+3818 None:intergenic
TTTAACTCTCTCCAATTTCT+GGG 0.408843 tig0023028:+4094 None:intergenic
TCGGTAGATTGCAAAACTTC+AGG 0.410370 tig0023028:+4224 None:intergenic
GCTTACCGGTGTCGGAAAAC+CGG 0.410663 tig0023028:+12065 None:intergenic
GCCGCTGGAACCTGGGATCC+AGG 0.413242 tig0023028:+4272 None:intergenic
ACATGGACTTCGACACTATA+AGG 0.413827 tig0023028:-1686 Msa1404120:CDS
GGCAGATAGGCCTTCCTTGG+TGG 0.414688 tig0023028:+4883 None:intergenic
GGGAGGAGCTCCTCCTTGGT+GGG 0.417029 tig0023028:-11859 Msa1404120:CDS
ATTTGCAACAACGGTATTCT+GGG 0.420187 tig0023028:-6111 Msa1404120:CDS
GCCATCCTTCGATGTTTCCT+TGG 0.421394 tig0023028:+4616 None:intergenic
CTCACAAAACGAGGACAAAC+TGG 0.423655 tig0023028:-4298 Msa1404120:CDS
TTTAACTCTCTCCAATTTCT+GGG 0.430061 tig0023028:+4646 None:intergenic
CAAGTCTCGGTATAGTTCTC+TGG 0.431082 tig0023028:+1632 None:intergenic
CTCATGAAACGAGGACAAAC+TGG 0.434890 tig0023028:-4850 Msa1404120:CDS
TGTTTCGTGTGTGAAACTTC+CGG 0.436007 tig0023028:+4034 None:intergenic
TTATCATCGGCAGACGCAGC+TGG 0.437623 tig0023028:+3981 None:intergenic
TTATCATCGGCAGACGCAGC+TGG 0.437623 tig0023028:+4809 None:intergenic
TGGGATGGTAAATGTGATAC+TGG 0.437681 tig0023028:+3837 None:intergenic
TGGGATGGTAAATGTGATAC+TGG 0.437681 tig0023028:+4113 None:intergenic
CTCACGAAATGAGGACAAAC+TGG 0.441034 tig0023028:-4574 Msa1404120:CDS
TTCCTTTGATGTCTCTTTAG+CGG 0.445950 tig0023028:+3791 None:intergenic
GGTGAGGGATTCTATTTGTA+AGG 0.446188 tig0023028:+12274 None:intergenic
GGCAGATGCCGCTGGAACCT+GGG 0.447609 tig0023028:+4265 None:intergenic
CACACGAAACAAGGACAAAC+TGG 0.447900 tig0023028:-3746 Msa1404120:CDS
CACACGAAACAAGGACAAAC+TGG 0.447900 tig0023028:-4022 Msa1404120:CDS
CGTTTCATGAGTGAAACTTC+CGG 0.449518 tig0023028:+4862 None:intergenic
TTATCATCGGCAGATGCCGC+TGG 0.451602 tig0023028:+4257 None:intergenic
GTAGAAGACTAGGGCATTGT+TGG 0.455570 tig0023028:+1599 None:intergenic
ACGAGGACAAACTGGTCTCC+TGG 0.456758 tig0023028:-4290 Msa1404120:CDS
ATAGAGTAAGCGTGAGAAGA+GGG 0.456916 tig0023028:+12251 None:intergenic
TCCATGAGGAATTCAAGCTT+TGG 0.458554 tig0023028:+3906 None:intergenic
CATACCCACGTCAGAGAAAC+CGG 0.462893 tig0023028:-12084 Msa1404120:five_prime_UTR
CCTCATTCTTCTCAGCCTCA+AGG 0.463301 tig0023028:+4984 None:intergenic
CCTATTTGACAACAGAAAAG+AGG 0.465236 tig0023028:-1735 Msa1404120:intron
TCCGGCAGATAGGCCTTCCT+TGG 0.468617 tig0023028:+4880 None:intergenic
TGTCGAAGTCCATGTGCTGC+TGG 0.468742 tig0023028:+1694 None:intergenic
AGTTTCACATTCTACTAAGC+AGG 0.470786 tig0023028:-3667 Msa1404120:CDS
CATTTCGTGAGTGAAACTTC+CGG 0.471724 tig0023028:+4586 None:intergenic
GTGGACGGTGATGGGTAGAT+GGG 0.472049 tig0023028:-11888 Msa1404120:exon
TTCCACAGAATGTGAAGAAT+CGG 0.472831 tig0023028:+1320 None:intergenic
ATCCTTCGATGTTTCCTTGG+TGG 0.477301 tig0023028:+4619 None:intergenic
GGAGCTCCTCCTTGGTGGGG+CGG 0.479990 tig0023028:-11855 Msa1404120:CDS
AGCCGATTCTTCACATTCTG+TGG 0.481332 tig0023028:-1322 Msa1404120:CDS
TTACACTTTGATGTAAATGT+AGG 0.481556 tig0023028:-926 Msa1404120:three_prime_UTR
CTGGGAAGGTAAATGTGATA+CGG 0.488701 tig0023028:+4664 None:intergenic
GGCAGACGCAGCTGGAACCT+GGG 0.489961 tig0023028:+3989 None:intergenic
GGCAGACGCAGCTGGAACCT+GGG 0.489961 tig0023028:+4817 None:intergenic
AGCGCTCTGGAGATTCAATT+GGG 0.492698 tig0023028:-5706 Msa1404120:intron
TCCAGTCTCGTGTCCCGTAC+CGG 0.492867 tig0023028:+11828 None:intergenic
TGGAAGAAATATTATGGAAG+TGG 0.494670 tig0023028:-3547 Msa1404120:CDS
CCGTCGAAGACTTGATGGTC+AGG 0.495020 tig0023028:-3323 Msa1404120:intron
GAGTGAAACTTCCGGCAGAT+AGG 0.495730 tig0023028:+4870 None:intergenic
AAACTGGTCTCCTGGATCCC+AGG 0.496812 tig0023028:-4282 Msa1404120:CDS
CAAAGGAAGGATTATCTGTC+GGG 0.497613 tig0023028:-3776 Msa1404120:CDS
GTGTGAAACTTCCGGCAGAT+AGG 0.498762 tig0023028:+4042 None:intergenic
ATAGTACCTCAGGGGTAAAA+GGG 0.499560 tig0023028:+11762 None:intergenic
ATGGAAATGGCGTGCACATA+CGG 0.500944 tig0023028:-2555 Msa1404120:intron
GAGTGAAACTTCCGGCAGAT+AGG 0.501201 tig0023028:+4594 None:intergenic
TGCGAAGGTACATGTGATAT+GGG 0.505813 tig0023028:+4389 None:intergenic
ACTCTCTCCAATTTCTGGGA+TGG 0.506480 tig0023028:+4098 None:intergenic
AGTCCTCAAGGTTGAGAAGA+AGG 0.506878 tig0023028:-4723 Msa1404120:CDS
ACTCTCTCCAATTTCTGTGA+AGG 0.509839 tig0023028:+4914 None:intergenic
TAGGACAATCAATGCGTTCT+CGG 0.509930 tig0023028:+11786 None:intergenic
GAGTGAAACTTCCGGCAGAT+AGG 0.510135 tig0023028:+4318 None:intergenic
AAAATAAGGCTTACCGGTGT+CGG 0.510309 tig0023028:+12057 None:intergenic
ACTCTCTCCAATTTCTGGGA+AGG 0.512135 tig0023028:+4650 None:intergenic
GGCAGATGGCGTTGAAACCT+GGG 0.515132 tig0023028:+4541 None:intergenic
AGTAGAACTTTCTTTACGCC+AGG 0.515174 tig0023028:+3479 None:intergenic
TCTCATTCTGCTCGGCCTTG+AGG 0.515915 tig0023028:+4168 None:intergenic
TGTAGTTTATTGAAGGAGGA+AGG 0.518229 tig0023028:-1104 Msa1404120:three_prime_UTR
AAGAAAGCTATTGAGCGCTC+TGG 0.520819 tig0023028:-5719 Msa1404120:CDS
ACATGAAGATTATGATGCAC+TGG 0.521987 tig0023028:+1444 None:intergenic
AAAACTGCTCTCCTTCTAAG+AGG 0.523048 tig0023028:-1555 Msa1404120:CDS
TGGCTTAGTTTCATTATCAT+CGG 0.525043 tig0023028:+3692 None:intergenic
GGAGGAGCTCCTCCTTGGTG+GGG 0.528293 tig0023028:-11858 Msa1404120:CDS
GACGTACACGTGGACGGTGA+TGG 0.528307 tig0023028:-11897 Msa1404120:exon
ACGCCATTTCCATCTTCTAT+GGG 0.530212 tig0023028:+2565 None:intergenic
ATCATTGCAAAGGCTGTTGG+TGG 0.531039 tig0023028:-1387 Msa1404120:CDS
TGTGAAGGTAAATGTGATGC+TGG 0.533695 tig0023028:+4929 None:intergenic
AATGAACTTGAGTTAGATGC+AGG 0.533923 tig0023028:-1065 Msa1404120:three_prime_UTR
AAAATCATTGCAAAGGCTGT+TGG 0.537560 tig0023028:-1390 Msa1404120:CDS
ACCAAGGAAGGCCTATCTGC+CGG 0.540490 tig0023028:-4881 Msa1404120:CDS
AGTTTCACAATCTACTGAGC+AGG 0.540791 tig0023028:-3943 Msa1404120:CDS
AGTTTCACAATCTACTGAGC+AGG 0.540791 tig0023028:-4771 Msa1404120:CDS
AAACTGGTTTCCTGAATCCC+AGG 0.541785 tig0023028:-4834 Msa1404120:CDS
TCAAAGGATGGCCTATCTGC+CGG 0.543453 tig0023028:-4053 Msa1404120:CDS
TCAAAGGATGGCCTATCTGC+CGG 0.543453 tig0023028:-4329 Msa1404120:CDS
TCGAAGGATGGCCTATCTGC+CGG 0.543453 tig0023028:-4605 Msa1404120:CDS
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 tig0023028:+3968 None:intergenic
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 tig0023028:+4244 None:intergenic
AGGCTTAGTCTCGTTATCAT+CGG 0.544765 tig0023028:+4796 None:intergenic
CTTTGATGTAAATGTAGGCA+AGG 0.545062 tig0023028:-921 Msa1404120:three_prime_UTR
GTACCCATAGAAGATGGAAA+TGG 0.545626 tig0023028:-2568 Msa1404120:CDS
GTTTCGTTATTATCGGCAGA+TGG 0.547357 tig0023028:+4527 None:intergenic
TATCCTTCTTCTCAACCTTG+AGG 0.547638 tig0023028:+4720 None:intergenic
AAACTGGTCTCCTGAATCCC+AGG 0.547815 tig0023028:-3730 Msa1404120:CDS
AAACTGGTCTCCTGAATCCC+AGG 0.547815 tig0023028:-4006 Msa1404120:CDS
AAACTGGTCTCCTGAATCCC+AGG 0.547815 tig0023028:-4558 Msa1404120:CDS
AGAGTAAGCGTGAGAAGAGG+GGG 0.548257 tig0023028:+12253 None:intergenic
CTGCAACACCAGTGAAAGGA+AGG 0.551244 tig0023028:-1225 Msa1404120:three_prime_UTR
AATGCGTTCTCGGAGTTCAC+CGG 0.551510 tig0023028:+11796 None:intergenic
TGATCTTCGAGTAGAAGACT+AGG 0.551667 tig0023028:+1589 None:intergenic
ACGTACACGTGGACGGTGAT+GGG 0.551870 tig0023028:-11896 Msa1404120:exon
TTGCGAAACTTTAGCCTGCT+CGG 0.552400 tig0023028:+4205 None:intergenic
ACTCTCACCAATTTCTGGGA+TGG 0.553891 tig0023028:+3822 None:intergenic
CTAGAGGTACCCATAGAAGA+TGG 0.554649 tig0023028:-2574 Msa1404120:CDS
AATAGAGTAAGCGTGAGAAG+AGG 0.555901 tig0023028:+12250 None:intergenic
ACTTTATATGAAATACAAGT+AGG 0.556142 tig0023028:-3612 Msa1404120:CDS
TCCTGGATCCCAGGTTCCAG+CGG 0.557730 tig0023028:-4273 Msa1404120:CDS
TTGGTGTAGTTTATTGAAGG+AGG 0.558471 tig0023028:-1108 Msa1404120:three_prime_UTR
AAAATGAGGGAGAGTTTCAA+GGG 0.558959 tig0023028:-1519 Msa1404120:CDS
TAGAGTAAGCGTGAGAAGAG+GGG 0.559235 tig0023028:+12252 None:intergenic
TGGGAAGGTAAATGTGATAC+GGG 0.559327 tig0023028:+4665 None:intergenic
ACCATCAAGTCTTCGACGGA+AGG 0.559496 tig0023028:+3327 None:intergenic
CGAGACTGGAACGTCGTCGC+CGG 0.566409 tig0023028:-11815 Msa1404120:CDS
ACCAAAGCTTGAATTCCTCA+TGG 0.567620 tig0023028:-3907 Msa1404120:CDS
GAAGTTTCACTCACGAAATG+AGG 0.567743 tig0023028:-4583 Msa1404120:CDS
GGAAGATGCAGCTGGAACCT+GGG 0.568210 tig0023028:+3713 None:intergenic
GTTAAATCTTCCACCAAGGA+AGG 0.569733 tig0023028:-4893 Msa1404120:CDS
TTATCATCGGAAGATGCAGC+TGG 0.573606 tig0023028:+3705 None:intergenic
ATTCAGCTGATGTTATGTCC+TGG 0.574362 tig0023028:-3497 Msa1404120:CDS
ACTCTCTCCAATTTCTGCGA+AGG 0.574819 tig0023028:+4374 None:intergenic
GACAACTCTGCATCTTCACA+AGG 0.577577 tig0023028:-1363 Msa1404120:CDS
TCAAAGGAAGGATTATCTGT+CGG 0.582759 tig0023028:-3777 Msa1404120:CDS
ATCAGGGACGTACACGTGGA+CGG 0.585049 tig0023028:-11903 Msa1404120:intron
AAAACCGGTTTCTCTGACGT+GGG 0.592498 tig0023028:+12080 None:intergenic
GGAGTTTCACACACGAAACA+AGG 0.592533 tig0023028:-3755 Msa1404120:CDS
GAAGTTTCACACACGAAACA+AGG 0.592533 tig0023028:-4031 Msa1404120:CDS
ATCAAAGCTTGAAGTCCTCA+AGG 0.595488 tig0023028:-4183 Msa1404120:CDS
ACCGGAAAACCGCCCCACCA+AGG 0.597321 tig0023028:+11846 None:intergenic
TCCGGCGAGAATTTCGGGAA+TGG 0.599880 tig0023028:+12114 None:intergenic
CTAATTCTAAAATGGGCTAG+AGG 0.601483 tig0023028:-2590 Msa1404120:CDS
ACCTCAGGGGTAAAAGGGAT+AGG 0.601507 tig0023028:+11767 None:intergenic
ATCAAAGATTGAAGACCTTG+AGG 0.601679 tig0023028:-4999 Msa1404120:CDS
AAGACTGCAACACCAGTGAA+AGG 0.602633 tig0023028:-1229 Msa1404120:three_prime_UTR
GAAAATGATCCAGCAGCACA+TGG 0.603766 tig0023028:-1703 Msa1404120:CDS
CCTTGAGGCTGAGAAGAATG+AGG 0.604647 tig0023028:-4984 Msa1404120:CDS
GGATAAGTTTATTATCAAAG+TGG 0.605616 tig0023028:-982 Msa1404120:three_prime_UTR
ATCAAAGCTTGAAGTCCTCA+AGG 0.605753 tig0023028:-4735 Msa1404120:CDS
GAACTTGAGTTAGATGCAGG+AGG 0.608296 tig0023028:-1062 Msa1404120:three_prime_UTR
TTGCACTAAAGAAACATCAA+AGG 0.610129 tig0023028:-4345 Msa1404120:CDS
TTCCACTAAAGAAACATCAA+AGG 0.611385 tig0023028:-4069 Msa1404120:CDS
ACCATTCCCGAAATTCTCGC+CGG 0.614241 tig0023028:-12115 Msa1404120:five_prime_UTR
ACTAAAGAAACATCAAAGGA+TGG 0.614875 tig0023028:-4065 Msa1404120:CDS
ACCAAGGAAACATCGAAGGA+TGG 0.615920 tig0023028:-4617 Msa1404120:CDS
AATAATCAGGGACGTACACG+TGG 0.616115 tig0023028:-11907 Msa1404120:intron
TGGACGGTGATGGGTAGATG+GGG 0.616380 tig0023028:-11887 Msa1404120:exon
TCTCATTCTTCTCATCCATG+AGG 0.618938 tig0023028:+3892 None:intergenic
GAAAACCGGTTTCTCTGACG+TGG 0.620355 tig0023028:+12079 None:intergenic
CCTGACCATCAAGTCTTCGA+CGG 0.624531 tig0023028:+3323 None:intergenic
TTCCACCAAGGAAACATCGA+AGG 0.625809 tig0023028:-4621 Msa1404120:CDS
ACTAAAGAAACATCAAAGGA+TGG 0.630887 tig0023028:-4341 Msa1404120:CDS
GCTAAAGAGACATCAAAGGA+AGG 0.634567 tig0023028:-3789 Msa1404120:CDS
TTCCGCTAAAGAGACATCAA+AGG 0.636984 tig0023028:-3793 Msa1404120:CDS
TGGTGAGTAGCAGCAAGTCT+CGG 0.639685 tig0023028:+1619 None:intergenic
AACTTGAGTTAGATGCAGGA+GGG 0.650685 tig0023028:-1061 Msa1404120:three_prime_UTR
GATCTTCGAGTAGAAGACTA+GGG 0.651766 tig0023028:+1590 None:intergenic
AAACCAAGAAGTGTAAGACC+AGG 0.662834 tig0023028:-1420 Msa1404120:CDS
AGTATGAAGATTTGCAACAA+CGG 0.672440 tig0023028:-6120 Msa1404120:CDS
GGACGGTGATGGGTAGATGG+GGG 0.676840 tig0023028:-11886 Msa1404120:exon
GGAAAACCGCCCCACCAAGG+AGG 0.682090 tig0023028:+11849 None:intergenic
GAGAGTTAAATCTTCCACCA+AGG 0.685418 tig0023028:-4633 Msa1404120:CDS
GAGAGTTAAATCTTCCACCA+AGG 0.692239 tig0023028:-4897 Msa1404120:CDS
GAAGTTTCACTCACAAAACG+AGG 0.701520 tig0023028:-4307 Msa1404120:CDS
AATTAATAATAGTACCTCAG+GGG 0.721941 tig0023028:+11754 None:intergenic
GAAGTTTCACTCATGAAACG+AGG 0.747697 tig0023028:-4859 Msa1404120:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATTAAATTAAATAATT+TGG - tig0023028:1438-1457 Msa1404120:CDS 0.0%
!! AATATAAATATAAAAAAAAA+AGG - tig0023028:3500-3519 Msa1404120:CDS 0.0%
!! TAAAATTTAAATAATTAATT+CGG + tig0023028:4341-4360 None:intergenic 0.0%
!!! ATTTTAAAAAAATATTTTAA+CGG - tig0023028:4355-4374 Msa1404120:CDS 0.0%
!! AAATTAAAATATTTAAATTT+AGG - tig0023028:5168-5187 Msa1404120:intron 0.0%
!! TATGTTATTATAAATAATCA+GGG - tig0023028:1253-1272 Msa1404120:exon 10.0%
!! AAAAAAATAGATAATATGAA+TGG + tig0023028:3560-3579 None:intergenic 10.0%
!!! TCCTAAATATTTTTTTTTAA+AGG - tig0023028:4975-4994 Msa1404120:CDS 10.0%
!!! TCCTTTAAAAAAAAATATTT+AGG + tig0023028:4979-4998 None:intergenic 10.0%
!! TATTCATATAAAATATGAAT+TGG - tig0023028:4999-5018 Msa1404120:CDS 10.0%
!! ATTCATATAAAATATGAATT+GGG - tig0023028:5000-5019 Msa1404120:CDS 10.0%
!!! AAATTATTTACTACTTTTTT+AGG + tig0023028:5779-5798 None:intergenic 10.0%
!! TATTATTAACTAAACTAAAA+AGG - tig0023028:6405-6424 Msa1404120:intron 10.0%
!! ATTATTAACTAAACTAAAAA+GGG - tig0023028:6406-6425 Msa1404120:intron 10.0%
!!! TCTCATATATAAATTAATTT+TGG - tig0023028:7791-7810 Msa1404120:intron 10.0%
!! ATTAAAATTATATAAAAGTG+TGG - tig0023028:8124-8143 Msa1404120:intron 10.0%
!! AAGACAGAAAAAATAAAATA+AGG + tig0023028:1132-1151 None:intergenic 15.0%
!! GTATGTTATTATAAATAATC+AGG - tig0023028:1252-1271 Msa1404120:exon 15.0%
!!! TTTGGATTTTTTTTTTTTGA+AGG - tig0023028:1456-1475 Msa1404120:CDS 15.0%
!!! TTTTTTTTTTTGAAGGATTT+TGG - tig0023028:1463-1482 Msa1404120:CDS 15.0%
!!! TTTTTGAACTTTATCATTAT+GGG + tig0023028:1518-1537 None:intergenic 15.0%
!!! TTTTTTGAACTTTATCATTA+TGG + tig0023028:1519-1538 None:intergenic 15.0%
!!! ATCATGTATAATGTTTTTTT+GGG - tig0023028:1627-1646 Msa1404120:CDS 15.0%
!!! ATTTTTAATTCGTAATTTGT+GGG + tig0023028:1686-1705 None:intergenic 15.0%
!!! TATTTTTAATTCGTAATTTG+TGG + tig0023028:1687-1706 None:intergenic 15.0%
!! CAAATTACGAATTAAAAATA+TGG - tig0023028:1687-1706 Msa1404120:CDS 15.0%
!!! TTTTTTAATGATTAGTGTTA+TGG - tig0023028:1756-1775 Msa1404120:intron 15.0%
!! TAGTATACTTTATTGTATTT+AGG + tig0023028:2002-2021 None:intergenic 15.0%
!!! TTGATGAATGTTTTTTTTTA+AGG - tig0023028:2521-2540 Msa1404120:intron 15.0%
!! TAATGTAAAATAACTACATT+AGG - tig0023028:2801-2820 Msa1404120:intron 15.0%
!! AATGTAAAATAACTACATTA+GGG - tig0023028:2802-2821 Msa1404120:intron 15.0%
!! CATATTTAATTCTTATACAT+AGG + tig0023028:3259-3278 None:intergenic 15.0%
!! TAACCAAAAATATATATTGA+AGG + tig0023028:3468-3487 None:intergenic 15.0%
!!! TTAATTTTTGACAATTTCTT+TGG - tig0023028:3654-3673 Msa1404120:CDS 15.0%
!!! TTTAAAATAAAAAAAGTCGT+TGG + tig0023028:3988-4007 None:intergenic 15.0%
!!! ACAAATAGTTTTTTTTTGTT+AGG - tig0023028:4014-4033 Msa1404120:CDS 15.0%
!!! ATTTTTAATGTTAATAAGTG+AGG - tig0023028:4060-4079 Msa1404120:CDS 15.0%
!!! TTAAAATTTAGGATACAATA+CGG + tig0023028:4716-4735 None:intergenic 15.0%
!!! CGCAATTTTTTTTAAAATTT+AGG + tig0023028:4727-4746 None:intergenic 15.0%
!!! CAAAAAAAGTTTTTTATTGA+AGG + tig0023028:4819-4838 None:intergenic 15.0%
!!! CAATTTTTATTAACTTCAAT+CGG + tig0023028:4902-4921 None:intergenic 15.0%
!! ATATAATAATAGAGGATAAA+GGG + tig0023028:6382-6401 None:intergenic 15.0%
!! AATATAATAATAGAGGATAA+AGG + tig0023028:6383-6402 None:intergenic 15.0%
!!! AAAAAATTGTGTTGTTTAAT+TGG - tig0023028:6704-6723 Msa1404120:intron 15.0%
!!! TTTTGTACAAAAATAATAGA+AGG - tig0023028:6968-6987 Msa1404120:intron 15.0%
!!! TATATAAGCTTTATATTTAG+TGG - tig0023028:7313-7332 Msa1404120:intron 15.0%
!! ATTAATTTATATATGAGAAG+CGG + tig0023028:7789-7808 None:intergenic 15.0%
!! TAAGATCAAAATTATTTGAT+AGG + tig0023028:10175-10194 None:intergenic 15.0%
!!! ATTTAACCTAATTCTAAAAT+GGG - tig0023028:10575-10594 Msa1404120:intron 15.0%
!! ATTTCATTACAAAAATACAT+AGG + tig0023028:10688-10707 None:intergenic 15.0%
!!! AGTTTTGTTAAATACTATAT+AGG - tig0023028:10872-10891 Msa1404120:intron 15.0%
!! AAAAATAAAATAAGGCTTAC+CGG + tig0023028:1124-1143 None:intergenic 20.0%
!!! TTTATTTTTTCTGTCTTTTC+CGG - tig0023028:1135-1154 Msa1404120:three_prime_UTR 20.0%
!!! TATTCTTATTTCAAACAACA+TGG - tig0023028:1202-1221 Msa1404120:three_prime_UTR 20.0%
!! TAATTAATAATAGTACCTCA+GGG + tig0023028:1422-1441 None:intergenic 20.0%
!! TTAATTAATAATAGTACCTC+AGG + tig0023028:1423-1442 None:intergenic 20.0%
!! CAAAAAAACATTATACATGA+TGG + tig0023028:1628-1647 None:intergenic 20.0%
!!! CATCATGTATAATGTTTTTT+TGG - tig0023028:1626-1645 Msa1404120:CDS 20.0%
!!! TTAATGCTTTATTGTTGAAT+TGG - tig0023028:2066-2085 Msa1404120:intron 20.0%
!!! TAATGCTTTATTGTTGAATT+GGG - tig0023028:2067-2086 Msa1404120:intron 20.0%
!!! ATCCTATTCTAAATTTGTTT+TGG - tig0023028:2293-2312 Msa1404120:intron 20.0%
!! GCTAGAATAATATATATTGT+GGG - tig0023028:2369-2388 Msa1404120:intron 20.0%
!! AAATTACAAGAATCATTACA+AGG - tig0023028:2412-2431 Msa1404120:intron 20.0%
!! TAGATTAAAGAATCATTACA+AGG - tig0023028:2442-2461 Msa1404120:intron 20.0%
!!! TTTTTTGTAGTAGTTGATTT+CGG - tig0023028:2693-2712 Msa1404120:intron 20.0%
!!! AATTAATTTTCTCCTTTTGT+GGG + tig0023028:2737-2756 None:intergenic 20.0%
!!! AAATTAATTTTCTCCTTTTG+TGG + tig0023028:2738-2757 None:intergenic 20.0%
!!! GAATTAAATATGTTTTTGAG+AGG - tig0023028:3267-3286 Msa1404120:intron 20.0%
!!! AAGTCAAAGACATATTTTTA+AGG - tig0023028:3401-3420 Msa1404120:intron 20.0%
!!! TGACCTTCAATATATATTTT+TGG - tig0023028:3462-3481 Msa1404120:CDS 20.0%
!! AAAAAAGGATCAAAACTAAA+AGG - tig0023028:3515-3534 Msa1404120:CDS 20.0%
!!! ACAATGTTTTGTTGTATAAA+TGG - tig0023028:3938-3957 Msa1404120:CDS 20.0%
!!! ACAAGAAGTATAATTTTAAG+CGG + tig0023028:4551-4570 None:intergenic 20.0%
!!! TGATAAGTTTAGGATTAAAA+CGG + tig0023028:4928-4947 None:intergenic 20.0%
!! AGATAAAACATGATAAGTTT+AGG + tig0023028:4938-4957 None:intergenic 20.0%
!! TTATATTACCAAACCAAAAA+AGG - tig0023028:5244-5263 Msa1404120:intron 20.0%
!!! ATCTTTTTTTTCTTTTGCTT+CGG + tig0023028:5340-5359 None:intergenic 20.0%
!! ATATATTTAATTGTTTCGCT+AGG - tig0023028:5680-5699 Msa1404120:intron 20.0%
!! TATATTTAATTGTTTCGCTA+GGG - tig0023028:5681-5700 Msa1404120:intron 20.0%
!!! ACTATTTTAAACTAATGGTT+AGG + tig0023028:5883-5902 None:intergenic 20.0%
!!! ACTCAACTATTTTAAACTAA+TGG + tig0023028:5888-5907 None:intergenic 20.0%
!! TAAAATAAGTGCTTATGAAA+TGG - tig0023028:6122-6141 Msa1404120:CDS 20.0%
!!! AATTTTATAAAAGAGAGGTT+AGG + tig0023028:6630-6649 None:intergenic 20.0%
!!! TAACCTCTCTTTTATAAAAT+TGG - tig0023028:6629-6648 Msa1404120:intron 20.0%
!!! TTACCAATTTTATAAAAGAG+AGG + tig0023028:6635-6654 None:intergenic 20.0%
!!! ATAAAATTGGTAATCAGAAA+TGG - tig0023028:6642-6661 Msa1404120:intron 20.0%
!! AATTGGTAAATTTATGTAGA+TGG - tig0023028:6721-6740 Msa1404120:intron 20.0%
!!! AATTTATTGTTTCCTAGTTT+TGG - tig0023028:6893-6912 Msa1404120:intron 20.0%
!!! TTTTTGTTATAAACTTTTCC+TGG - tig0023028:7112-7131 Msa1404120:intron 20.0%
!!! ACTTCTATGAAATTTTCAAA+GGG + tig0023028:7343-7362 None:intergenic 20.0%
!!! AACTTCTATGAAATTTTCAA+AGG + tig0023028:7344-7363 None:intergenic 20.0%
!!! CCTAAATTTTTAAGAACAAA+CGG + tig0023028:7582-7601 None:intergenic 20.0%
!! TTTCAATACTCATTTCTATA+TGG - tig0023028:7851-7870 Msa1404120:intron 20.0%
!!! TTTACAATTACCTTTGTTTT+AGG + tig0023028:7908-7927 None:intergenic 20.0%
!! TAAGAATGTGTTGAATTATA+CGG + tig0023028:8105-8124 None:intergenic 20.0%
!! AAAAAAGATGATTGTGAAAA+TGG - tig0023028:9026-9045 Msa1404120:intron 20.0%
!! AAAAAAGATGATTGTGAAAA+TGG - tig0023028:9026-9045 Msa1404120:intron 20.0%
!! ACTTTATATGAAATACAAGT+AGG - tig0023028:9560-9579 Msa1404120:intron 20.0%
!!! ATTTTGATTTTTACCTATGA+TGG - tig0023028:9980-9999 Msa1404120:intron 20.0%
!!! AAGTTTTTTTTTTTCCACAT+AGG - tig0023028:10295-10314 Msa1404120:intron 20.0%
!!! AACACATGTATATTTTGTAA+CGG + tig0023028:10351-10370 None:intergenic 20.0%
!!! CATTTTAGAATTAGGTTAAA+TGG + tig0023028:10576-10595 None:intergenic 20.0%
!!! CATTTAACCTAATTCTAAAA+TGG - tig0023028:10574-10593 Msa1404120:intron 20.0%
!! TAAACAACTTAACAAGTTAA+AGG - tig0023028:10796-10815 Msa1404120:intron 20.0%
!! AAAGTTATAGTTAACCAATA+TGG - tig0023028:12169-12188 Msa1404120:five_prime_UTR 20.0%
!! GATAATAAACTTATCCATAT+TGG + tig0023028:12186-12205 None:intergenic 20.0%
!!! TTTTGCTGTCGAAAAAAATA+AGG + tig0023028:998-1017 None:intergenic 25.0%
! TTTATAATAACATACGCACA+CGG + tig0023028:1247-1266 None:intergenic 25.0%
! AATTAATAATAGTACCTCAG+GGG + tig0023028:1421-1440 None:intergenic 25.0%
! CATTATGGGAAAAAACAAAA+AGG + tig0023028:1504-1523 None:intergenic 25.0%
!!! GTTTATTGTTTTGTTTGTAG+TGG - tig0023028:1565-1584 Msa1404120:CDS 25.0%
! AACAAAAGTAGAAAACACAT+TGG + tig0023028:1599-1618 None:intergenic 25.0%
! AAACATTATACATGATGGTT+AGG + tig0023028:1623-1642 None:intergenic 25.0%
! TAAAAGAATAGGAAAAAGAG+AGG - tig0023028:1789-1808 Msa1404120:intron 25.0%
! AAAAGAATAGGAAAAAGAGA+GGG - tig0023028:1790-1809 Msa1404120:intron 25.0%
!!! AAGAGAGGGTATTAAATAAT+AGG - tig0023028:1804-1823 Msa1404120:intron 25.0%
!!! AGAGAGGGTATTAAATAATA+GGG - tig0023028:1805-1824 Msa1404120:intron 25.0%
! TCTTGTTAACTTATGCTATA+AGG - tig0023028:1828-1847 Msa1404120:intron 25.0%
! CTTGTTAACTTATGCTATAA+GGG - tig0023028:1829-1848 Msa1404120:intron 25.0%
!! TTATGAATGCACAATTTTCA+AGG + tig0023028:1887-1906 None:intergenic 25.0%
!! TTACGCATTTGACATATTTT+TGG + tig0023028:2248-2267 None:intergenic 25.0%
!! AGCCAAAACAAATTTAGAAT+AGG + tig0023028:2298-2317 None:intergenic 25.0%
!!! AATATAAACTTTTGAGAGCA+TGG - tig0023028:2323-2342 Msa1404120:intron 25.0%
!!! ACCCTATTCTAAATTTGTTT+TGG - tig0023028:2347-2366 Msa1404120:intron 25.0%
!! GCCAAAACAAATTTAGAATA+GGG + tig0023028:2297-2316 None:intergenic 25.0%
!! AGCCAAAACAAATTTAGAAT+AGG + tig0023028:2298-2317 None:intergenic 25.0%
! GGCTAGAATAATATATATTG+TGG - tig0023028:2368-2387 Msa1404120:intron 25.0%
! GAATAATATATATTGTGGGA+CGG - tig0023028:2373-2392 Msa1404120:intron 25.0%
! ATTTAAAAACTGTCTACACA+TGG - tig0023028:2623-2642 Msa1404120:intron 25.0%
!!! AGACTTTAACTTTTCTCTTT+AGG - tig0023028:2764-2783 Msa1404120:intron 25.0%
!!! GACTTTAACTTTTCTCTTTA+GGG - tig0023028:2765-2784 Msa1404120:intron 25.0%
!!! AACGTGTAAAGATTTGTTTT+AGG + tig0023028:2931-2950 None:intergenic 25.0%
!!! AAACGTGTAAAGATTTGTTA+AGG + tig0023028:3090-3109 None:intergenic 25.0%
!! TAACAAATCTTTACACGTTT+TGG - tig0023028:3090-3109 Msa1404120:intron 25.0%
! TCATTGCATAACATATATAG+AGG - tig0023028:3136-3155 Msa1404120:intron 25.0%
! ATATATATTGAAGGTCATGT+AGG + tig0023028:3459-3478 None:intergenic 25.0%
!!! ATTTGCTTTTAATAATTCCG+AGG - tig0023028:3625-3644 Msa1404120:CDS 25.0%
! TCAAAAATTAAAGAATGCCT+CGG + tig0023028:3645-3664 None:intergenic 25.0%
! GCTTCATAGAAAAATAGTTA+AGG + tig0023028:4226-4245 None:intergenic 25.0%
!! TTTACTCTTCATCTTTTTCT+AGG + tig0023028:4443-4462 None:intergenic 25.0%
! ATTATACTTCTTGTGAATGA+AGG - tig0023028:4557-4576 Msa1404120:CDS 25.0%
!! ATAAGTTTAGGATTAAAACG+GGG + tig0023028:4926-4945 None:intergenic 25.0%
!! GATAAGTTTAGGATTAAAAC+GGG + tig0023028:4927-4946 None:intergenic 25.0%
! ACATATTTCAACTAAGTAAG+TGG + tig0023028:6518-6537 None:intergenic 25.0%
! ATTAGAACAAACAAAGCAAA+AGG + tig0023028:6593-6612 None:intergenic 25.0%
!! TTTTTAATCCTATGCTTACT+AGG + tig0023028:6686-6705 None:intergenic 25.0%
!!! CTTAGAGATATTACTTTTGT+AGG - tig0023028:7017-7036 Msa1404120:intron 25.0%
!! AGAGACTATAAGATTTTACT+CGG - tig0023028:7284-7303 Msa1404120:intron 25.0%
! CCGTTTGTTCTTAAAAATTT+AGG - tig0023028:7579-7598 Msa1404120:intron 25.0%
! AAAAAAAATTATTAGCCGAG+TGG - tig0023028:7696-7715 Msa1404120:intron 25.0%
! AAGAATGTGTTGAATTATAC+GGG + tig0023028:8104-8123 None:intergenic 25.0%
! GAAAAAGATGATTGTGAAAA+TGG - tig0023028:8210-8229 Msa1404120:intron 25.0%
! AAAAATCATGACTGTGAAAA+TGG - tig0023028:8474-8493 Msa1404120:intron 25.0%
! AAGCTTAGTTTCGTTATTAT+CGG + tig0023028:8655-8674 None:intergenic 25.0%
! AAAAAACATGGTTGTGAAAA+TGG - tig0023028:8750-8769 Msa1404120:intron 25.0%
!!! AGTTTTGAATGGAGATAATT+TGG - tig0023028:9532-9551 Msa1404120:intron 25.0%
!!! GATTCTATTTTTGAAACTGA+AGG - tig0023028:9814-9833 Msa1404120:intron 25.0%
! TTGTTATGGTCAAAATATGA+GGG - tig0023028:10046-10065 Msa1404120:intron 25.0%
! AAATTATTTGATAGGACTTG+AGG + tig0023028:10167-10186 None:intergenic 25.0%
!!! CTTCTAACCATTTTAGAATT+AGG - tig0023028:10438-10457 Msa1404120:intron 25.0%
!! CATATAGCCTAATTCTAAAA+TGG + tig0023028:10448-10467 None:intergenic 25.0%
! TAGAATTAGGTTAAATGGTT+TGG + tig0023028:10571-10590 None:intergenic 25.0%
! AATGAAATGTGTGTGAAAAA+TGG - tig0023028:10700-10719 Msa1404120:intron 25.0%
!! TTAAGTTGTTTAATTGTACC+TGG + tig0023028:10788-10807 None:intergenic 25.0%
! CTCATTATTAACTTAGTGTA+TGG - tig0023028:11118-11137 Msa1404120:intron 25.0%
! TATTAACTTAGTGTATGGTA+TGG - tig0023028:11123-11142 Msa1404120:intron 25.0%
!! AACAAAGTAGTAGTGATTTT+AGG - tig0023028:11981-12000 Msa1404120:intron 25.0%
!!! TGATTTTAGGTTTAACGAAT+AGG - tig0023028:11994-12013 Msa1404120:intron 25.0%
!!! TTTTTGGTGTAGTTTATTGA+AGG - tig0023028:12061-12080 Msa1404120:intron 25.0%
! GGATAAGTTTATTATCAAAG+TGG - tig0023028:12190-12209 Msa1404120:five_prime_UTR 25.0%
! TTACACTTTGATGTAAATGT+AGG - tig0023028:12246-12265 Msa1404120:five_prime_UTR 25.0%
!!! TAGTTTTTGTTGGTTTAAGG+TGG + tig0023028:1038-1057 None:intergenic 30.0%
!!! TGGTAGTTTTTGTTGGTTTA+AGG + tig0023028:1041-1060 None:intergenic 30.0%
! TCTTATTTCAAACAACATGG+CGG - tig0023028:1205-1224 Msa1404120:three_prime_UTR 30.0%
! GTAAGAGAGCATAAAAGAAT+AGG - tig0023028:1778-1797 Msa1404120:intron 30.0%
!!! TTTGACATATTTTTGGTCGT+TGG + tig0023028:2241-2260 None:intergenic 30.0%
CTACACATGGATCAATTTAA+TGG - tig0023028:2636-2655 Msa1404120:intron 30.0%
!! GCAATGTCAATGGATTATAT+CGG + tig0023028:2892-2911 None:intergenic 30.0%
AAACAAATCTTTACACGTTC+CGG - tig0023028:2932-2951 Msa1404120:intron 30.0%
!! GAACGTGTAAAGATTTGTTA+AGG + tig0023028:3011-3030 None:intergenic 30.0%
TAACAAATCTTTACACGTTC+TGG - tig0023028:3011-3030 Msa1404120:intron 30.0%
TGAGCTTAACTCAATTGATT+GGG - tig0023028:3034-3053 Msa1404120:intron 30.0%
CATAACATATATAGAGGTTG+AGG - tig0023028:3142-3161 Msa1404120:intron 30.0%
TAAGGTAATGCTTCATATAC+AGG - tig0023028:3419-3438 Msa1404120:intron 30.0%
AAGGTAATGCTTCATATACA+GGG - tig0023028:3420-3439 Msa1404120:intron 30.0%
! TTCATATACAGGGGTATAAA+AGG - tig0023028:3430-3449 Msa1404120:CDS 30.0%
TGTTAATAAGTGAGGTCTTA+AGG - tig0023028:4068-4087 Msa1404120:CDS 30.0%
!! AACTATTTTTCTATGAAGCC+CGG - tig0023028:4227-4246 Msa1404120:CDS 30.0%
AATTAATTCGGATACTTCGT+GGG + tig0023028:4329-4348 None:intergenic 30.0%
TAATTAATTCGGATACTTCG+TGG + tig0023028:4330-4349 None:intergenic 30.0%
AGATGAAGAGTAAAAAAGTG+AGG - tig0023028:4449-4468 Msa1404120:CDS 30.0%
!!! TTTTTTGCATAATCATCACG+CGG - tig0023028:4832-4851 Msa1404120:CDS 30.0%
TAACTTTCTGATGTATCCTA+AGG + tig0023028:5288-5307 None:intergenic 30.0%
TTAATATTTACTCCCTTGTC+CGG - tig0023028:5833-5852 Msa1404120:intron 30.0%
TAAACTAATGGTTAGGAAGT+TGG + tig0023028:5876-5895 None:intergenic 30.0%
CACGTATCTTAACATATGTT+TGG + tig0023028:5957-5976 None:intergenic 30.0%
AAGATTAAGTTACAAGAGCA+AGG + tig0023028:6103-6122 None:intergenic 30.0%
ACAACTTGACAACAAAAAAG+TGG + tig0023028:6183-6202 None:intergenic 30.0%
ACATTAGTGTATATGACACA+TGG + tig0023028:6458-6477 None:intergenic 30.0%
TGTGTCATATACACTAATGT+TGG - tig0023028:6458-6477 Msa1404120:intron 30.0%
AGATAAATCCTAGTAAGCAT+AGG - tig0023028:6675-6694 Msa1404120:intron 30.0%
GAATGACAAGAAAACACAAA+AGG + tig0023028:6752-6771 None:intergenic 30.0%
AGTATGAAGATTTGCAACAA+CGG - tig0023028:7052-7071 Msa1404120:intron 30.0%
AAATGTACTAACAAGTAACC+AGG + tig0023028:7133-7152 None:intergenic 30.0%
!!! ATTTTTTGTATGAGGAGCTT+AGG - tig0023028:7409-7428 Msa1404120:intron 30.0%
!! ATTCAATTGGGTTAGTTTCA+TGG - tig0023028:7478-7497 Msa1404120:intron 30.0%
TAAAACTAACTTACACCACT+CGG + tig0023028:7714-7733 None:intergenic 30.0%
! AATGAGTTTTCATTGGAAGT+CGG + tig0023028:7739-7758 None:intergenic 30.0%
ATTGAAGAGACCTAAAACAA+AGG - tig0023028:7895-7914 Msa1404120:intron 30.0%
GTAAAAGGATTTACAAGTGT+TGG + tig0023028:7964-7983 None:intergenic 30.0%
ACATTTACCTTCACAGAAAT+TGG - tig0023028:8251-8270 Msa1404120:intron 30.0%
TTTAACTCTCTCCAATTTCT+GGG + tig0023028:8265-8284 None:intergenic 30.0%
ATTTAACTCTCTCCAATTTC+TGG + tig0023028:8266-8285 None:intergenic 30.0%
TTGCACTAAAGAAACATCAA+AGG - tig0023028:8827-8846 Msa1404120:intron 30.0%
ACTAAAGAAACATCAAAGGA+TGG - tig0023028:8831-8850 Msa1404120:intron 30.0%
!!! ATCTTTTTTCTCATTCTGCT+CGG + tig0023028:9015-9034 None:intergenic 30.0%
TTTAACTCTCTCCAATTTCT+GGG + tig0023028:8265-8284 None:intergenic 30.0%
!! TTTTAACTCTCTCCAATTTC+TGG + tig0023028:9082-9101 None:intergenic 30.0%
TTCCACTAAAGAAACATCAA+AGG - tig0023028:9103-9122 Msa1404120:intron 30.0%
ATCCTTTGATGTTTCTTTAG+TGG + tig0023028:8832-8851 None:intergenic 30.0%
ACTAAAGAAACATCAAAGGA+TGG - tig0023028:8831-8850 Msa1404120:intron 30.0%
TGGCTTAGTTTCATTATCAT+CGG + tig0023028:9483-9502 None:intergenic 30.0%
TTAGTAGAATGTGAAACTTC+TGG + tig0023028:9503-9522 None:intergenic 30.0%
AAGTAGGATGTCGTAAAAAA+CGG - tig0023028:9576-9595 Msa1404120:intron 30.0%
GGATTGTGGAAGAAATATTA+TGG - tig0023028:9619-9638 Msa1404120:intron 30.0%
TGGAAGAAATATTATGGAAG+TGG - tig0023028:9625-9644 Msa1404120:intron 30.0%
TCTAACAAAGTAACCATCAT+AGG + tig0023028:9996-10015 None:intergenic 30.0%
ATAGTTGTTTGATGTTCTCT+AGG - tig0023028:10017-10036 Msa1404120:intron 30.0%
TAGTTGTTTGATGTTCTCTA+GGG - tig0023028:10018-10037 Msa1404120:intron 30.0%
! CTTGTTATGGTCAAAATATG+AGG - tig0023028:10045-10064 Msa1404120:intron 30.0%
! TCTCACTTATGTTTTACTCA+CGG + tig0023028:10198-10217 None:intergenic 30.0%
TAGAATTAGGCTATATGACT+TGG - tig0023028:10451-10470 Msa1404120:intron 30.0%
ATACAGCTTAAAAGAGTTGT+TGG - tig0023028:10739-10758 Msa1404120:intron 30.0%
TTGTTTAATTGTACCTGGTT+GGG + tig0023028:10783-10802 None:intergenic 30.0%
AACTTAACAAGTTAAAGGAC+TGG - tig0023028:10801-10820 Msa1404120:intron 30.0%
TAAATACTATATAGGCTGTG+AGG - tig0023028:10880-10899 Msa1404120:intron 30.0%
AAGAAGTTCAAGAATAAGGT+CGG + tig0023028:10926-10945 None:intergenic 30.0%
GAGAAAGAAGTTCAAGAATA+AGG + tig0023028:10930-10949 None:intergenic 30.0%
GACAATGCATAATATATGCA+AGG - tig0023028:11194-11213 Msa1404120:intron 30.0%
ACAAAAGAGATCAGTGAATA+TGG + tig0023028:11243-11262 None:intergenic 30.0%
ATTCTACATTGGCAACTTAA+TGG + tig0023028:11325-11344 None:intergenic 30.0%
CAAAGATGCAAATTCTACAT+TGG + tig0023028:11336-11355 None:intergenic 30.0%
CAACAGAAAAATCATTGCAA+AGG - tig0023028:11775-11794 Msa1404120:CDS 30.0%
CTTCTTCTTCATGACATTTA+AGG + tig0023028:11879-11898 None:intergenic 30.0%
TTTGGTAGACAGAAAAAAGT+CGG - tig0023028:11901-11920 Msa1404120:five_prime_UTR 30.0%
! TACAAAGATTTTCTCCGTTT+TGG - tig0023028:12030-12049 Msa1404120:intron 30.0%
CAAAAAACACCTAACCAAAA+CGG + tig0023028:12047-12066 None:intergenic 30.0%
! CTAACTCAAGTTCATTTTGT+TGG + tig0023028:12103-12122 None:intergenic 30.0%
!!! TTTGTTTTTGCTAGCATCAA+AGG - tig0023028:12221-12240 Msa1404120:five_prime_UTR 30.0%
!!! TTGTTTTTGCTAGCATCAAA+GGG - tig0023028:12222-12241 Msa1404120:five_prime_UTR 30.0%
!!! GCAAGGTTTTTTTTTAGCAA+TGG - tig0023028:12268-12287 Msa1404120:five_prime_UTR 30.0%
!!! GGTTTAAGGTGGTTTTAAAG+AGG + tig0023028:1027-1046 None:intergenic 35.0%
ATCCTTATATTGTGCCCTAA+GGG - tig0023028:1960-1979 Msa1404120:intron 35.0%
!!! ATATTTTTGGTCGTTGGATC+AGG + tig0023028:2235-2254 None:intergenic 35.0%
GACAATTTACAACCCACAAA+AGG - tig0023028:2722-2741 Msa1404120:intron 35.0%
AATTGTGTCAGCAATGTCAA+TGG + tig0023028:2902-2921 None:intergenic 35.0%
TGAGCTTAACTCAATTGGTT+GGG - tig0023028:2955-2974 Msa1404120:intron 35.0%
GTGAGCTTAACTCAATTGAT+TGG - tig0023028:3033-3052 Msa1404120:intron 35.0%
TTTGGTGAGCTTAACTCAAT+TGG - tig0023028:3108-3127 Msa1404120:intron 35.0%
TGAGCTTAACTCAATTGGTT+AGG - tig0023028:2955-2974 Msa1404120:intron 35.0%
CGGGCAGATTAAAAATAAGT+AGG + tig0023028:3328-3347 None:intergenic 35.0%
AGGTAATGCTTCATATACAG+GGG - tig0023028:3421-3440 Msa1404120:intron 35.0%
TAAGTATCCTTGTGTATCTG+CGG + tig0023028:4397-4416 None:intergenic 35.0%
GAGGCAATGTTGTAAACATT+CGG - tig0023028:4468-4487 Msa1404120:CDS 35.0%
! ATTTAGGATACAATACGGCT+AGG + tig0023028:4711-4730 None:intergenic 35.0%
ACCAAACCAAAAAAGGTCTT+CGG - tig0023028:5251-5270 Msa1404120:intron 35.0%
!! CGGTTTGTTCATTCTTGTTT+TGG + tig0023028:5320-5339 None:intergenic 35.0%
TTCTTATCCTACACACCAAA+AGG - tig0023028:6002-6021 Msa1404120:intron 35.0%
TCTTATCCTACACACCAAAA+GGG - tig0023028:6003-6022 Msa1404120:intron 35.0%
GTCCAATGAAAATCCATCAT+TGG - tig0023028:6069-6088 Msa1404120:intron 35.0%
!!! GTCCAATGATGGATTTTCAT+TGG + tig0023028:6074-6093 None:intergenic 35.0%
ATTTGCAACAACGGTATTCT+GGG - tig0023028:7061-7080 Msa1404120:intron 35.0%
! TTTTTAATCCAGTAGCCTAG+TGG - tig0023028:7165-7184 Msa1404120:intron 35.0%
!! ACCCTTTGAGGTGAATAATT+GGG - tig0023028:7198-7217 Msa1404120:intron 35.0%
TGTTATGTCTCATTGCATGA+TGG - tig0023028:7367-7386 Msa1404120:intron 35.0%
ATGGTAAAATTGCAATGCCA+GGG - tig0023028:7386-7405 Msa1404120:intron 35.0%
GACTTCCAATGAAAACTCAT+TGG - tig0023028:7738-7757 Msa1404120:intron 35.0%
GGTTACAAAATAGGCTTATG+TGG + tig0023028:7768-7787 None:intergenic 35.0%
ATGAGAAGCGGTTACAAAAT+AGG + tig0023028:7777-7796 None:intergenic 35.0%
!!! ACAGTTCTGGTTTTTGAGTT+TGG + tig0023028:7931-7950 None:intergenic 35.0%
AATGTGTTGAATTATACGGG+TGG + tig0023028:8101-8120 None:intergenic 35.0%
TGTGGTTACTTGTATGTTTC+AGG - tig0023028:8142-8161 Msa1404120:intron 35.0%
ATCAAAGATTGAAGACCTTG+AGG - tig0023028:8173-8192 Msa1404120:intron 35.0%
TCAGTAGATTGTGAAACTTC+AGG + tig0023028:8399-8418 None:intergenic 35.0%
ACATTTACCTTCCCAGAAAT+TGG - tig0023028:8515-8534 Msa1404120:intron 35.0%
GAGAAGAACGAGAAAAAACA+TGG - tig0023028:8738-8757 Msa1404120:intron 35.0%
ACATTTACCATCCCAGAAAT+TGG - tig0023028:9067-9086 Msa1404120:intron 35.0%
TCAGTAGATTGTGAAACTTC+AGG + tig0023028:8399-8418 None:intergenic 35.0%
ACATTTACCATCCCAGAAAT+TGG - tig0023028:9067-9086 Msa1404120:intron 35.0%
TTCAACTCTCACCAATTTCT+GGG + tig0023028:9357-9376 None:intergenic 35.0%
ATTCAACTCTCACCAATTTC+TGG + tig0023028:9358-9377 None:intergenic 35.0%
TTCCTTTGATGTCTCTTTAG+CGG + tig0023028:9384-9403 None:intergenic 35.0%
TCAAAGGAAGGATTATCTGT+CGG - tig0023028:9395-9414 Msa1404120:intron 35.0%
AGTTTCACATTCTACTAAGC+AGG - tig0023028:9505-9524 Msa1404120:intron 35.0%
!!! AAGCAGGCTAAAGTTTTGAA+TGG - tig0023028:9521-9540 Msa1404120:intron 35.0%
AAGAGAAAAAGGAAGGATTG+TGG - tig0023028:9605-9624 Msa1404120:intron 35.0%
! TCCATAAAAGCTTTTGATGC+TGG - tig0023028:9930-9949 Msa1404120:intron 35.0%
AATATGAGGGTCCTTAAAAG+AGG - tig0023028:10059-10078 Msa1404120:intron 35.0%
TTATTTGATAGGACTTGAGG+TGG + tig0023028:10164-10183 None:intergenic 35.0%
! TGAAAAGGGTAACGGTTAAA+AGG + tig0023028:10322-10341 None:intergenic 35.0%
! TGTAACGGAATGTGTGAAAA+GGG + tig0023028:10336-10355 None:intergenic 35.0%
! TTGTAACGGAATGTGTGAAA+AGG + tig0023028:10337-10356 None:intergenic 35.0%
AATGGTTAGAAGTTACACCT+AGG + tig0023028:10430-10449 None:intergenic 35.0%
CCAATGTACAAATTCTCAGA+GGG + tig0023028:10488-10507 None:intergenic 35.0%
! CCTCTGAGAATTTGTACATT+GGG - tig0023028:10486-10505 Msa1404120:intron 35.0%
!!! CTCTAGCCCATTTTAGAATT+AGG + tig0023028:10584-10603 None:intergenic 35.0%
!! CTAATTCTAAAATGGGCTAG+AGG - tig0023028:10582-10601 Msa1404120:intron 35.0%
TAACTTTGTTCCTACCATGT+TGG - tig0023028:10648-10667 Msa1404120:intron 35.0%
TGTTATGTTACCAACATGGT+AGG + tig0023028:10661-10680 None:intergenic 35.0%
TGTCTGTTATGTTACCAACA+TGG + tig0023028:10665-10684 None:intergenic 35.0%
GTTGTTTAATTGTACCTGGT+TGG + tig0023028:10784-10803 None:intergenic 35.0%
TTTCTCGAAGAACTTACGTA+AGG - tig0023028:10944-10963 Msa1404120:intron 35.0%
TTCTCGAAGAACTTACGTAA+GGG - tig0023028:10945-10964 Msa1404120:intron 35.0%
GCTCTTTGACGAAAAAACAT+AGG + tig0023028:11053-11072 None:intergenic 35.0%
! TGAGCTTAACTTAGTTGGTA+AGG - tig0023028:11172-11191 Msa1404120:intron 35.0%
CATAATATATGCAAGGTCTG+AGG - tig0023028:11201-11220 Msa1404120:intron 35.0%
TCAGTGAATATGGTTGTTTG+AGG + tig0023028:11233-11252 None:intergenic 35.0%
!! TTGGTAAATGGACTAATGGT+AGG + tig0023028:11297-11316 None:intergenic 35.0%
TTAATGGTGTGCTTGGTAAA+TGG + tig0023028:11309-11328 None:intergenic 35.0%
! CAATGAAGAGTATGCATACA+AGG - tig0023028:11383-11402 Msa1404120:intron 35.0%
! CCTCTTTTCTGTTGTCAAAT+AGG + tig0023028:11440-11459 None:intergenic 35.0%
CCTATTTGACAACAGAAAAG+AGG - tig0023028:11437-11456 Msa1404120:intron 35.0%
! CTCTGGTTGATTCAATTGTT+CGG + tig0023028:11526-11545 None:intergenic 35.0%
CATAGTCGCCAAAAAAATGA+GGG - tig0023028:11640-11659 Msa1404120:intron 35.0%
!!! GAAACTCTCCCTCATTTTTT+TGG + tig0023028:11651-11670 None:intergenic 35.0%
AAAAATGAGGGAGAGTTTCA+AGG - tig0023028:11652-11671 Msa1404120:intron 35.0%
AAAATGAGGGAGAGTTTCAA+GGG - tig0023028:11653-11672 Msa1404120:intron 35.0%
GGTAATTTCGTAGACTCATT+AGG + tig0023028:11710-11729 None:intergenic 35.0%
ACATGAAGATTATGATGCAC+TGG + tig0023028:11731-11750 None:intergenic 35.0%
AAAATCATTGCAAAGGCTGT+TGG - tig0023028:11782-11801 Msa1404120:CDS 35.0%
! TGTGAAGAATCGGCTTTAAT+GGG + tig0023028:11845-11864 None:intergenic 35.0%
! ATGTGAAGAATCGGCTTTAA+TGG + tig0023028:11846-11865 None:intergenic 35.0%
TTCCACAGAATGTGAAGAAT+CGG + tig0023028:11855-11874 None:intergenic 35.0%
! TGTCATGAAGAAGAAGCTTT+TGG - tig0023028:11883-11902 Msa1404120:exon 35.0%
!!! AGATTTTCTCCGTTTTGGTT+AGG - tig0023028:12035-12054 Msa1404120:intron 35.0%
!!! CGTTTTGGTTAGGTGTTTTT+TGG - tig0023028:12045-12064 Msa1404120:intron 35.0%
TTGGTGTAGTTTATTGAAGG+AGG - tig0023028:12064-12083 Msa1404120:intron 35.0%
TGTAGTTTATTGAAGGAGGA+AGG - tig0023028:12068-12087 Msa1404120:intron 35.0%
AATGAACTTGAGTTAGATGC+AGG - tig0023028:12107-12126 Msa1404120:five_prime_UTR 35.0%
CTTTGATGTAAATGTAGGCA+AGG - tig0023028:12251-12270 Msa1404120:five_prime_UTR 35.0%
GGTGAGGGATTCTATTTGTA+AGG + tig0023028:901-920 None:intergenic 40.0%
ATAGAGTAAGCGTGAGAAGA+GGG + tig0023028:924-943 None:intergenic 40.0%
AATAGAGTAAGCGTGAGAAG+AGG + tig0023028:925-944 None:intergenic 40.0%
! TCGGGAATGGTAGTTTTTGT+TGG + tig0023028:1048-1067 None:intergenic 40.0%
! TATTTTCCGGCGAGAATTTC+GGG + tig0023028:1066-1085 None:intergenic 40.0%
! CTATTTTCCGGCGAGAATTT+CGG + tig0023028:1067-1086 None:intergenic 40.0%
! ACGTGGGTATGTCTATTTTC+CGG + tig0023028:1079-1098 None:intergenic 40.0%
AAAATAAGGCTTACCGGTGT+CGG + tig0023028:1118-1137 None:intergenic 40.0%
AAATCAACCACCATCTTCTC+CGG + tig0023028:1164-1183 None:intergenic 40.0%
TAGGACAATCAATGCGTTCT+CGG + tig0023028:1389-1408 None:intergenic 40.0%
ATAGTACCTCAGGGGTAAAA+GGG + tig0023028:1413-1432 None:intergenic 40.0%
AATAGTACCTCAGGGGTAAA+AGG + tig0023028:1414-1433 None:intergenic 40.0%
GATCCTTATATTGTGCCCTA+AGG - tig0023028:1959-1978 Msa1404120:intron 40.0%
! AATGCTAACTTGTGCCCTTA+GGG + tig0023028:1977-1996 None:intergenic 40.0%
! AAATGCTAACTTGTGCCCTT+AGG + tig0023028:1978-1997 None:intergenic 40.0%
ATTCGTCAAACGTGTGAATG+CGG + tig0023028:2130-2149 None:intergenic 40.0%
GTTTGACGAATCTAGATCGT+TGG - tig0023028:2139-2158 Msa1404120:intron 40.0%
! TACACAAACCTTTGAGAGCA+TGG - tig0023028:2269-2288 Msa1404120:intron 40.0%
ATAGGATTCCATGCTCTCAA+AGG + tig0023028:2280-2299 None:intergenic 40.0%
ACCAATTGAGTTAAGCTCAC+CGG + tig0023028:2954-2973 None:intergenic 40.0%
GTGAGCTTAACTCAATTGGT+TGG - tig0023028:2954-2973 Msa1404120:intron 40.0%
ATCAGTATCCGATACGTATC+CGG + tig0023028:4280-4299 None:intergenic 40.0%
TATCGGATACTGATACTCCA+CGG - tig0023028:4286-4305 Msa1404120:CDS 40.0%
GCAATGTTGTAAACATTCGG+TGG - tig0023028:4471-4490 Msa1404120:CDS 40.0%
ATAGCTATGAAGCCCAGATA+CGG + tig0023028:4783-4802 None:intergenic 40.0%
!!! ACCGAAGACCTTTTTTGGTT+TGG + tig0023028:5255-5274 None:intergenic 40.0%
!!! CTTGTACCGAAGACCTTTTT+TGG + tig0023028:5260-5279 None:intergenic 40.0%
AAAAGGTCTTCGGTACAAGT+TGG - tig0023028:5261-5280 Msa1404120:intron 40.0%
AAAGGTCTTCGGTACAAGTT+GGG - tig0023028:5262-5281 Msa1404120:intron 40.0%
ACTAATGGTTAGGAAGTTGG+AGG + tig0023028:5873-5892 None:intergenic 40.0%
TGCGAAGAAGTGGAAAATCT+AGG - tig0023028:6230-6249 Msa1404120:intron 40.0%
GCGAAGAAGTGGAAAATCTA+GGG - tig0023028:6231-6250 Msa1404120:intron 40.0%
AGATCCATGGACGTTGATAT+GGG + tig0023028:6271-6290 None:intergenic 40.0%
AAGATCCATGGACGTTGATA+TGG + tig0023028:6272-6291 None:intergenic 40.0%
TACGTCCTGTAATTGCAACT+CGG + tig0023028:6300-6319 None:intergenic 40.0%
!!! ATTTTAGAGCGACGATTCAG+TGG - tig0023028:6429-6448 Msa1404120:intron 40.0%
TGTGAATAACAATTGCCAGG+TGG + tig0023028:6487-6506 None:intergenic 40.0%
! ACCTGGCAATTGTTATTCAC+AGG - tig0023028:6486-6505 Msa1404120:intron 40.0%
ACCTGTGAATAACAATTGCC+AGG + tig0023028:6490-6509 None:intergenic 40.0%
AAGACATGATCACTTGCACA+TGG - tig0023028:6548-6567 Msa1404120:intron 40.0%
TCACTTGCACATGGTCAATT+AGG - tig0023028:6557-6576 Msa1404120:intron 40.0%
TGGTAATCAGAAATGGCACA+TGG - tig0023028:6649-6668 Msa1404120:intron 40.0%
!!! TTGTTTCCTAGTTTTGGCGT+AGG - tig0023028:6899-6918 Msa1404120:intron 40.0%
TCATATCCTACGCCAAAACT+AGG + tig0023028:6908-6927 None:intergenic 40.0%
GATTTGCAACAACGGTATTC+TGG - tig0023028:7060-7079 Msa1404120:intron 40.0%
!!! ATTTTTAGCCACTAGGCTAC+TGG + tig0023028:7176-7195 None:intergenic 40.0%
CAATTATTCACCTCAAAGGG+TGG + tig0023028:7199-7218 None:intergenic 40.0%
!! CACCCTTTGAGGTGAATAAT+TGG - tig0023028:7197-7216 Msa1404120:intron 40.0%
CCCCAATTATTCACCTCAAA+GGG + tig0023028:7202-7221 None:intergenic 40.0%
!! CCCTTTGAGGTGAATAATTG+GGG - tig0023028:7199-7218 Msa1404120:intron 40.0%
TCCCCAATTATTCACCTCAA+AGG + tig0023028:7203-7222 None:intergenic 40.0%
GTGAATAATTGGGGAATCTG+AGG - tig0023028:7208-7227 Msa1404120:intron 40.0%
TAGAAACTTGCGATATGCAG+GGG + tig0023028:7245-7264 None:intergenic 40.0%
GTAGAAACTTGCGATATGCA+GGG + tig0023028:7246-7265 None:intergenic 40.0%
CTCTATGAGCATAGCTCAAT+TGG + tig0023028:7268-7287 None:intergenic 40.0%
GATGGTAAAATTGCAATGCC+AGG - tig0023028:7385-7404 Msa1404120:intron 40.0%
!!! TGCCAGGGATTTTTTGTATG+AGG - tig0023028:7401-7420 Msa1404120:intron 40.0%
CTCCTCATACAAAAAATCCC+TGG + tig0023028:7406-7425 None:intergenic 40.0%
! GCGATCCAATGAGTTTTCAT+TGG + tig0023028:7746-7765 None:intergenic 40.0%
! TGGTTTAGAGTTCACAGTTC+TGG + tig0023028:7944-7963 None:intergenic 40.0%
TGCACACTACACACTGTAAA+AGG + tig0023028:7979-7998 None:intergenic 40.0%
ATCTTGTGTCCGTTTCATCA+CGG - tig0023028:8009-8028 Msa1404120:intron 40.0%
CTTATCCTACCGTGATGAAA+CGG + tig0023028:8021-8040 None:intergenic 40.0%
TGTGAAGGTAAATGTGATGC+TGG + tig0023028:8246-8265 None:intergenic 40.0%
ACTCTCTCCAATTTCTGTGA+AGG + tig0023028:8261-8280 None:intergenic 40.0%
GAGAGTTAAATCTTCCACCA+AGG - tig0023028:8275-8294 Msa1404120:intron 40.0%
GTTAAATCTTCCACCAAGGA+AGG - tig0023028:8279-8298 Msa1404120:intron 40.0%
CGTTTCATGAGTGAAACTTC+CGG + tig0023028:8313-8332 None:intergenic 40.0%
GAAGTTTCACTCATGAAACG+AGG - tig0023028:8313-8332 Msa1404120:intron 40.0%
AGGCTTAGTCTCGTTATCAT+CGG + tig0023028:8379-8398 None:intergenic 40.0%
AGTTTCACAATCTACTGAGC+AGG - tig0023028:8401-8420 Msa1404120:intron 40.0%
ATCAAAGCTTGAAGTCCTCA+AGG - tig0023028:8437-8456 Msa1404120:intron 40.0%
TATCCTTCTTCTCAACCTTG+AGG + tig0023028:8455-8474 None:intergenic 40.0%
TGGGAAGGTAAATGTGATAC+GGG + tig0023028:8510-8529 None:intergenic 40.0%
CTGGGAAGGTAAATGTGATA+CGG + tig0023028:8511-8530 None:intergenic 40.0%
GAGAGTTAAATCTTCCACCA+AGG - tig0023028:8275-8294 Msa1404120:intron 40.0%
CATTTCGTGAGTGAAACTTC+CGG + tig0023028:8589-8608 None:intergenic 40.0%
GAAGTTTCACTCACGAAATG+AGG - tig0023028:8589-8608 Msa1404120:intron 40.0%
GTTTCGTTATTATCGGCAGA+TGG + tig0023028:8648-8667 None:intergenic 40.0%
! AGTTTTGCAATCTACTGAGC+AGG - tig0023028:8677-8696 Msa1404120:intron 40.0%
! TGCGAAGGTACATGTGATAT+GGG + tig0023028:8786-8805 None:intergenic 40.0%
ACATGTACCTTCGCAGAAAT+TGG - tig0023028:8791-8810 Msa1404120:intron 40.0%
! CGTTTTGTGAGTGAAACTTC+CGG + tig0023028:8865-8884 None:intergenic 40.0%
GAAGTTTCACTCACAAAACG+AGG - tig0023028:8865-8884 Msa1404120:intron 40.0%
AGGCTTAGTCTCGTTATCAT+CGG + tig0023028:8379-8398 None:intergenic 40.0%
TCGGTAGATTGCAAAACTTC+AGG + tig0023028:8951-8970 None:intergenic 40.0%
ATCAAAGCTTGAAGTCCTCA+AGG - tig0023028:8437-8456 Msa1404120:intron 40.0%
TGGGATGGTAAATGTGATAC+TGG + tig0023028:9062-9081 None:intergenic 40.0%
TGTTTCGTGTGTGAAACTTC+CGG + tig0023028:9141-9160 None:intergenic 40.0%
GAAGTTTCACACACGAAACA+AGG - tig0023028:9141-9160 Msa1404120:intron 40.0%
AGGCTTAGTCTCGTTATCAT+CGG + tig0023028:8379-8398 None:intergenic 40.0%
AGTTTCACAATCTACTGAGC+AGG - tig0023028:8401-8420 Msa1404120:intron 40.0%
ACCAAAGCTTGAATTCCTCA+TGG - tig0023028:9265-9284 Msa1404120:intron 40.0%
TCCATGAGGAATTCAAGCTT+TGG + tig0023028:9269-9288 None:intergenic 40.0%
TCTCATTCTTCTCATCCATG+AGG + tig0023028:9283-9302 None:intergenic 40.0%
TGGGATGGTAAATGTGATAC+TGG + tig0023028:9062-9081 None:intergenic 40.0%
TTCCGCTAAAGAGACATCAA+AGG - tig0023028:9379-9398 Msa1404120:intron 40.0%
GCTAAAGAGACATCAAAGGA+AGG - tig0023028:9383-9402 Msa1404120:intron 40.0%
CAAAGGAAGGATTATCTGTC+GGG - tig0023028:9396-9415 Msa1404120:intron 40.0%
GATGTCGTAAAAAACGGAGA+GGG - tig0023028:9582-9601 Msa1404120:intron 40.0%
ATTCAGCTGATGTTATGTCC+TGG - tig0023028:9675-9694 Msa1404120:intron 40.0%
AGTAGAACTTTCTTTACGCC+AGG + tig0023028:9696-9715 None:intergenic 40.0%
GTCTACATGAGCAGAAGATT+TGG + tig0023028:9738-9757 None:intergenic 40.0%
! GAACCTGAAAAAGCATAGCA+CGG - tig0023028:9771-9790 Msa1404120:intron 40.0%
! GCCAGCATCAAAAGCTTTTA+TGG + tig0023028:9934-9953 None:intergenic 40.0%
AACGGTTAAAAGGACCTATG+TGG + tig0023028:10312-10331 None:intergenic 40.0%
GGAATGTGTGAAAAGGGTAA+CGG + tig0023028:10330-10349 None:intergenic 40.0%
! CCCTCTGAGAATTTGTACAT+TGG - tig0023028:10485-10504 Msa1404120:intron 40.0%
CCCAATGTACAAATTCTCAG+AGG + tig0023028:10489-10508 None:intergenic 40.0%
CTGAGAATTTGTACATTGGG+AGG - tig0023028:10489-10508 Msa1404120:intron 40.0%
GTACCCATAGAAGATGGAAA+TGG - tig0023028:10604-10623 Msa1404120:intron 40.0%
ACGCCATTTCCATCTTCTAT+GGG + tig0023028:10610-10629 None:intergenic 40.0%
AAAACCTTAAAGACCCAACC+AGG - tig0023028:10767-10786 Msa1404120:intron 40.0%
TGTGGATCATATGGAGAAGT+GGG + tig0023028:10993-11012 None:intergenic 40.0%
TTGTGGATCATATGGAGAAG+TGG + tig0023028:10994-11013 None:intergenic 40.0%
ACTAGTGGTTGTGGATCATA+TGG + tig0023028:11002-11021 None:intergenic 40.0%
CACAACCACTAGTAGACTAA+CGG - tig0023028:11009-11028 Msa1404120:intron 40.0%
! ATTTGCCGTTAGTCTACTAG+TGG + tig0023028:11017-11036 None:intergenic 40.0%
CCAACTAAGTTAAGCTCACA+AGG + tig0023028:11170-11189 None:intergenic 40.0%
CCTTGTGAGCTTAACTTAGT+TGG - tig0023028:11167-11186 Msa1404120:intron 40.0%
!! GTGCTTGGTAAATGGACTAA+TGG + tig0023028:11301-11320 None:intergenic 40.0%
ACATGGACTTCGACACTATA+AGG - tig0023028:11486-11505 Msa1404120:intron 40.0%
GATCTTCGAGTAGAAGACTA+GGG + tig0023028:11585-11604 None:intergenic 40.0%
TGATCTTCGAGTAGAAGACT+AGG + tig0023028:11586-11605 None:intergenic 40.0%
AAAACTGCTCTCCTTCTAAG+AGG - tig0023028:11617-11636 Msa1404120:intron 40.0%
GCATAGTCGCCAAAAAAATG+AGG - tig0023028:11639-11658 Msa1404120:intron 40.0%
! AAACCAAGAAGTGTAAGACC+AGG - tig0023028:11752-11771 Msa1404120:intron 40.0%
! GCAATGATTTTTCTGTTGCC+TGG + tig0023028:11773-11792 None:intergenic 40.0%
!!! GTCTTTTGACTTGAAGTCAC+AGG + tig0023028:11928-11947 None:intergenic 40.0%
! ACTCTTTTCCTTCCTTTCAC+TGG + tig0023028:11958-11977 None:intergenic 40.0%
AACTTGAGTTAGATGCAGGA+GGG - tig0023028:12111-12130 Msa1404120:five_prime_UTR 40.0%
TAGAGTAAGCGTGAGAAGAG+GGG + tig0023028:923-942 None:intergenic 45.0%
! AAAACCGGTTTCTCTGACGT+GGG + tig0023028:1095-1114 None:intergenic 45.0%
! TTTCTGTCTTTTCCGGTGAC+CGG - tig0023028:1142-1161 Msa1404120:three_prime_UTR 45.0%
AATAATCAGGGACGTACACG+TGG - tig0023028:1265-1284 Msa1404120:CDS 45.0%
TGCCCTTAGGGCACAATATA+AGG + tig0023028:1965-1984 None:intergenic 45.0%
TCCGGTGAGCTTAACTCAAT+TGG - tig0023028:2950-2969 Msa1404120:intron 45.0%
TTAATCTGCCCGCAAAGTCT+CGG - tig0023028:3336-3355 Msa1404120:CDS 45.0%
CTCGGACATCATTAGGGTTA+CGG + tig0023028:4101-4120 None:intergenic 45.0%
CAGTTGCTCGGACATCATTA+GGG + tig0023028:4107-4126 None:intergenic 45.0%
TCAGTTGCTCGGACATCATT+AGG + tig0023028:4108-4127 None:intergenic 45.0%
!!! GTCTCCATTTTGGAGTATCC+GGG + tig0023028:4248-4267 None:intergenic 45.0%
!!! CGTCTCCATTTTGGAGTATC+CGG + tig0023028:4249-4268 None:intergenic 45.0%
TATCCGATACGTATCCGGTA+CGG + tig0023028:4275-4294 None:intergenic 45.0%
TGATACTCCACGGATACTTG+CGG - tig0023028:4296-4315 Msa1404120:CDS 45.0%
ATACCGGTACGATACGATAC+GGG + tig0023028:4760-4779 None:intergenic 45.0%
GATACCGGTACGATACGATA+CGG + tig0023028:4761-4780 None:intergenic 45.0%
!! ACTAGACCCTTTTGGTGTGT+AGG + tig0023028:6012-6031 None:intergenic 45.0%
! GCATCTTCACTAGACCCTTT+TGG + tig0023028:6020-6039 None:intergenic 45.0%
CATTGGACGCACGTGTAAAT+TGG + tig0023028:6057-6076 None:intergenic 45.0%
GCACTATAAGTGCGAAGAAG+TGG - tig0023028:6220-6239 Msa1404120:intron 45.0%
TGGACGTTGATATGGGGATT+GGG + tig0023028:6264-6283 None:intergenic 45.0%
ATGGACGTTGATATGGGGAT+TGG + tig0023028:6265-6284 None:intergenic 45.0%
AATCCCCATATCAACGTCCA+TGG - tig0023028:6264-6283 Msa1404120:intron 45.0%
GATCCATGGACGTTGATATG+GGG + tig0023028:6270-6289 None:intergenic 45.0%
!! AACTCGGTTGGTAAGATCCA+TGG + tig0023028:6284-6303 None:intergenic 45.0%
ACCAACCGAGTTGCAATTAC+AGG - tig0023028:6292-6311 Msa1404120:intron 45.0%
TCCTGTAATTGCAACTCGGT+TGG + tig0023028:6296-6315 None:intergenic 45.0%
CTTGCACATGGTCAATTAGG+TGG - tig0023028:6560-6579 Msa1404120:intron 45.0%
!!! AGGGTGGATTTTTAGCCACT+AGG + tig0023028:7183-7202 None:intergenic 45.0%
GGCTAAAAATCCACCCTTTG+AGG - tig0023028:7186-7205 Msa1404120:intron 45.0%
GGTAGAAACTTGCGATATGC+AGG + tig0023028:7247-7266 None:intergenic 45.0%
AAGAAAGCTATTGAGCGCTC+TGG - tig0023028:7453-7472 Msa1404120:intron 45.0%
!! AGCGCTCTGGAGATTCAATT+GGG - tig0023028:7466-7485 Msa1404120:intron 45.0%
AGTGTGTAGTGTGCACTGTA+AGG - tig0023028:7984-8003 Msa1404120:intron 45.0%
CTCATGAAACGAGGACAAAC+TGG - tig0023028:8322-8341 Msa1404120:intron 45.0%
! AAACTGGTTTCCTGAATCCC+AGG - tig0023028:8338-8357 Msa1404120:intron 45.0%
AGTCCTCAAGGTTGAGAAGA+AGG - tig0023028:8449-8468 Msa1404120:intron 45.0%
! ACTCTCTCCAATTTCTGGGA+AGG + tig0023028:8525-8544 None:intergenic 45.0%
TTCCACCAAGGAAACATCGA+AGG - tig0023028:8551-8570 Msa1404120:intron 45.0%
ATCCTTCGATGTTTCCTTGG+TGG + tig0023028:8556-8575 None:intergenic 45.0%
ACCAAGGAAACATCGAAGGA+TGG - tig0023028:8555-8574 Msa1404120:intron 45.0%
CTCACGAAATGAGGACAAAC+TGG - tig0023028:8598-8617 Msa1404120:intron 45.0%
TCTCGTTCTTCTCAGCTTTG+AGG + tig0023028:8731-8750 None:intergenic 45.0%
! CTGCGAAGGTACATGTGATA+TGG + tig0023028:8787-8806 None:intergenic 45.0%
ACTCTCTCCAATTTCTGCGA+AGG + tig0023028:8801-8820 None:intergenic 45.0%
CTCACAAAACGAGGACAAAC+TGG - tig0023028:8874-8893 Msa1404120:intron 45.0%
! AGTTTTGCAATCTACCGAGC+AGG - tig0023028:8953-8972 Msa1404120:intron 45.0%
TTGCGAAACTTTAGCCTGCT+CGG + tig0023028:8970-8989 None:intergenic 45.0%
! ACTCTCTCCAATTTCTGGGA+TGG + tig0023028:8525-8544 None:intergenic 45.0%
CACACGAAACAAGGACAAAC+TGG - tig0023028:9150-9169 Msa1404120:intron 45.0%
! ACTCTCACCAATTTCTGGGA+TGG + tig0023028:9353-9372 None:intergenic 45.0%
GGAGTTTCACACACGAAACA+AGG - tig0023028:9417-9436 Msa1404120:intron 45.0%
CACACGAAACAAGGACAAAC+TGG - tig0023028:9150-9169 Msa1404120:intron 45.0%
TTATCATCGGAAGATGCAGC+TGG + tig0023028:9470-9489 None:intergenic 45.0%
GGATGTCGTAAAAAACGGAG+AGG - tig0023028:9581-9600 Msa1404120:intron 45.0%
AACGGAGAGGGAAGAGAAAA+AGG - tig0023028:9594-9613 Msa1404120:intron 45.0%
GAGAGGGAAGAGAAAAAGGA+AGG - tig0023028:9598-9617 Msa1404120:intron 45.0%
!!! CTTCCGTGCTATGCTTTTTC+AGG + tig0023028:9777-9796 None:intergenic 45.0%
!! TCTCTAGGGAGTGCTTGTTA+TGG - tig0023028:10032-10051 Msa1404120:intron 45.0%
! AGGGTCCTTAAAAGAGGTGT+AGG - tig0023028:10065-10084 Msa1404120:intron 45.0%
! GTCCTTAAAAGAGGTGTAGG+CGG - tig0023028:10068-10087 Msa1404120:intron 45.0%
! ATCCGCCTACACCTCTTTTA+AGG + tig0023028:10073-10092 None:intergenic 45.0%
GTACCTCTTTCTCATCTCCT+AGG - tig0023028:10410-10429 Msa1404120:intron 45.0%
ACACCTAGGAGATGAGAAAG+AGG + tig0023028:10416-10435 None:intergenic 45.0%
ATTGGGAGGTGAATACCTCT+GGG - tig0023028:10503-10522 Msa1404120:intron 45.0%
AATTGATTGTGTAGCCCCAG+AGG + tig0023028:10521-10540 None:intergenic 45.0%
!! CTAGAGGTACCCATAGAAGA+TGG - tig0023028:10598-10617 Msa1404120:intron 45.0%
CACGCCATTTCCATCTTCTA+TGG + tig0023028:10611-10630 None:intergenic 45.0%
ATGGAAATGGCGTGCACATA+CGG - tig0023028:10617-10636 Msa1404120:intron 45.0%
TGTACCTGGTTGGGTCTTTA+AGG + tig0023028:10774-10793 None:intergenic 45.0%
CGAAGAACTTACGTAAGGGT+CGG - tig0023028:10949-10968 Msa1404120:intron 45.0%
GAAGAACTTACGTAAGGGTC+GGG - tig0023028:10950-10969 Msa1404120:intron 45.0%
AAGAACTTACGTAAGGGTCG+GGG - tig0023028:10951-10970 Msa1404120:intron 45.0%
! CGTTAGTCTACTAGTGGTTG+TGG + tig0023028:11011-11030 None:intergenic 45.0%
TGGCAACTTAATGGTGTGCT+TGG + tig0023028:11316-11335 None:intergenic 45.0%
GAAAATGATCCAGCAGCACA+TGG - tig0023028:11469-11488 Msa1404120:intron 45.0%
CAAGTCTCGGTATAGTTCTC+TGG + tig0023028:11543-11562 None:intergenic 45.0%
!! GTAGAAGACTAGGGCATTGT+TGG + tig0023028:11576-11595 None:intergenic 45.0%
!! TTGCCTGGTCTTACACTTCT+TGG + tig0023028:11758-11777 None:intergenic 45.0%
ATCATTGCAAAGGCTGTTGG+TGG - tig0023028:11785-11804 Msa1404120:CDS 45.0%
GACAACTCTGCATCTTCACA+AGG - tig0023028:11809-11828 Msa1404120:CDS 45.0%
! AGCCGATTCTTCACATTCTG+TGG - tig0023028:11850-11869 Msa1404120:CDS 45.0%
AAGACTGCAACACCAGTGAA+AGG - tig0023028:11943-11962 Msa1404120:intron 45.0%
GAACTTGAGTTAGATGCAGG+AGG - tig0023028:12110-12129 Msa1404120:five_prime_UTR 45.0%
!!! TTTTTTTATATTTATATTGA+AGG + tig0023028:3498-3517 None:intergenic 5.0%
!!! ATTTTATTTATTGAAAATAT+TGG - tig0023028:3784-3803 Msa1404120:CDS 5.0%
!!! ATATTTTAAATTATTTTTGT+AGG + tig0023028:5079-5098 None:intergenic 5.0%
!! TAATAATAATATAATAATAG+AGG + tig0023028:6390-6409 None:intergenic 5.0%
AGAGTAAGCGTGAGAAGAGG+GGG + tig0023028:922-941 None:intergenic 50.0%
ACCATTCCCGAAATTCTCGC+CGG - tig0023028:1057-1076 Msa1404120:three_prime_UTR 50.0%
CATACCCACGTCAGAGAAAC+CGG - tig0023028:1088-1107 Msa1404120:three_prime_UTR 50.0%
! GAAAACCGGTTTCTCTGACG+TGG + tig0023028:1096-1115 None:intergenic 50.0%
!! AGAAACCGGTTTTCCGACAC+CGG - tig0023028:1102-1121 Msa1404120:three_prime_UTR 50.0%
AATGCGTTCTCGGAGTTCAC+CGG + tig0023028:1379-1398 None:intergenic 50.0%
! TCCTATCCCTTTTACCCCTG+AGG - tig0023028:1404-1423 Msa1404120:CDS 50.0%
ACCTCAGGGGTAAAAGGGAT+AGG + tig0023028:1408-1427 None:intergenic 50.0%
TTTGGTCGTTGGATCAGGCT+CGG + tig0023028:2230-2249 None:intergenic 50.0%
AGAAGCTTCCGAGACTTTGC+GGG + tig0023028:3347-3366 None:intergenic 50.0%
CAGAAGCTTCCGAGACTTTG+CGG + tig0023028:3348-3367 None:intergenic 50.0%
GAAGCCCGGATACTCCAAAA+TGG - tig0023028:4241-4260 Msa1404120:CDS 50.0%
! GTACGGGTACGTCTCCATTT+TGG + tig0023028:4258-4277 None:intergenic 50.0%
AAATGGAGACGTACCCGTAC+CGG - tig0023028:4258-4277 Msa1404120:CDS 50.0%
TACCCGTACCGGATACGTAT+CGG - tig0023028:4269-4288 Msa1404120:CDS 50.0%
ATCCGATACGTATCCGGTAC+GGG + tig0023028:4274-4293 None:intergenic 50.0%
CGATACTCCGCAGATACACA+AGG - tig0023028:4387-4406 Msa1404120:CDS 50.0%
GTACCCGTATCGTATCGTAC+CGG - tig0023028:4754-4773 Msa1404120:CDS 50.0%
! ATCGTACCGGTATCCGTATC+TGG - tig0023028:4767-4786 Msa1404120:CDS 50.0%
! TCGTACCGGTATCCGTATCT+GGG - tig0023028:4768-4787 Msa1404120:CDS 50.0%
TGAAGCCCAGATACGGATAC+CGG + tig0023028:4776-4795 None:intergenic 50.0%
! TTCGGTACAAGTTGGGCCTT+AGG - tig0023028:5269-5288 Msa1404120:intron 50.0%
CAAGGTGACGTGTCCAATGA+TGG + tig0023028:6085-6104 None:intergenic 50.0%
GGACGTTGATATGGGGATTG+GGG + tig0023028:6263-6282 None:intergenic 50.0%
CACTAATGTTGGCATCCACC+TGG - tig0023028:6469-6488 Msa1404120:intron 50.0%
!! GAGCGCTCTGGAGATTCAAT+TGG - tig0023028:7465-7484 Msa1404120:intron 50.0%
TGTGTCCGTTTCATCACGGT+AGG - tig0023028:8013-8032 Msa1404120:intron 50.0%
CCTCATTCTTCTCAGCCTCA+AGG + tig0023028:8191-8210 None:intergenic 50.0%
CCTTGAGGCTGAGAAGAATG+AGG - tig0023028:8188-8207 Msa1404120:intron 50.0%
GAGTGAAACTTCCGGCAGAT+AGG + tig0023028:8305-8324 None:intergenic 50.0%
GCCATCCTTCGATGTTTCCT+TGG + tig0023028:8559-8578 None:intergenic 50.0%
GAGTGAAACTTCCGGCAGAT+AGG + tig0023028:8305-8324 None:intergenic 50.0%
! AAACTGGTCTCCTGAATCCC+AGG - tig0023028:8614-8633 Msa1404120:intron 50.0%
TCAAAGGATGGCCTATCTGC+CGG - tig0023028:8843-8862 Msa1404120:intron 50.0%
GAGTGAAACTTCCGGCAGAT+AGG + tig0023028:8305-8324 None:intergenic 50.0%
TCAAAGGATGGCCTATCTGC+CGG - tig0023028:8843-8862 Msa1404120:intron 50.0%
GTGTGAAACTTCCGGCAGAT+AGG + tig0023028:9133-9152 None:intergenic 50.0%
! AAACTGGTCTCCTGAATCCC+AGG - tig0023028:8614-8633 Msa1404120:intron 50.0%
! AAACTGGTCTCCTGAATCCC+AGG - tig0023028:8614-8633 Msa1404120:intron 50.0%
ACCATCAAGTCTTCGACGGA+AGG + tig0023028:9848-9867 None:intergenic 50.0%
CCTGACCATCAAGTCTTCGA+CGG + tig0023028:9852-9871 None:intergenic 50.0%
CATTGGGAGGTGAATACCTC+TGG - tig0023028:10502-10521 Msa1404120:intron 50.0%
TTGGGAGGTGAATACCTCTG+GGG - tig0023028:10504-10523 Msa1404120:intron 50.0%
TGGTGAGTAGCAGCAAGTCT+CGG + tig0023028:11556-11575 None:intergenic 50.0%
TGGCGACTATGCCTCTTAGA+AGG + tig0023028:11631-11650 None:intergenic 50.0%
CTGCAACACCAGTGAAAGGA+AGG - tig0023028:11947-11966 Msa1404120:intron 50.0%
TCCGGCGAGAATTTCGGGAA+TGG + tig0023028:1061-1080 None:intergenic 55.0%
! GCTTACCGGTGTCGGAAAAC+CGG + tig0023028:1110-1129 None:intergenic 55.0%
TTTCCGGTGACCGGAGAAGA+TGG - tig0023028:1151-1170 Msa1404120:three_prime_UTR 55.0%
ATCAGGGACGTACACGTGGA+CGG - tig0023028:1269-1288 Msa1404120:CDS 55.0%
ACGTACACGTGGACGGTGAT+GGG - tig0023028:1276-1295 Msa1404120:CDS 55.0%
!! GTGGACGGTGATGGGTAGAT+GGG - tig0023028:1284-1303 Msa1404120:CDS 55.0%
!! TGGACGGTGATGGGTAGATG+GGG - tig0023028:1285-1304 Msa1404120:CDS 55.0%
! TGATGGGTAGATGGGGGACA+TGG - tig0023028:1292-1311 Msa1404120:CDS 55.0%
GATGGGTAGATGGGGGACAT+GGG - tig0023028:1293-1312 Msa1404120:CDS 55.0%
GTCCGAGCAACTGAGCTAAG+CGG - tig0023028:4114-4133 Msa1404120:CDS 55.0%
TCCGAGCAACTGAGCTAAGC+GGG - tig0023028:4115-4134 Msa1404120:CDS 55.0%
TCCCGCTTAGCTCAGTTGCT+CGG + tig0023028:4119-4138 None:intergenic 55.0%
TGCGTATCCGCAAGTATCCG+TGG + tig0023028:4306-4325 None:intergenic 55.0%
ACCAAGGAAGGCCTATCTGC+CGG - tig0023028:8291-8310 Msa1404120:intron 55.0%
TTATCATCGGCAGACGCAGC+TGG + tig0023028:8366-8385 None:intergenic 55.0%
TCGAAGGATGGCCTATCTGC+CGG - tig0023028:8567-8586 Msa1404120:intron 55.0%
! GGCGTTGAAACCTGGGATTC+AGG + tig0023028:8627-8646 None:intergenic 55.0%
! GGCAGATGGCGTTGAAACCT+GGG + tig0023028:8634-8653 None:intergenic 55.0%
! ACGAGGACAAACTGGTCTCC+TGG - tig0023028:8882-8901 Msa1404120:intron 55.0%
! AAACTGGTCTCCTGGATCCC+AGG - tig0023028:8890-8909 Msa1404120:intron 55.0%
TTATCATCGGCAGATGCCGC+TGG + tig0023028:8918-8937 None:intergenic 55.0%
TCTCATTCTGCTCGGCCTTG+AGG + tig0023028:9007-9026 None:intergenic 55.0%
TTATCATCGGCAGACGCAGC+TGG + tig0023028:8366-8385 None:intergenic 55.0%
GGAAGATGCAGCTGGAACCT+GGG + tig0023028:9462-9481 None:intergenic 55.0%
GCCTTCCGTCGAAGACTTGA+TGG - tig0023028:9844-9863 Msa1404120:intron 55.0%
! CCGTCGAAGACTTGATGGTC+AGG - tig0023028:9849-9868 Msa1404120:intron 55.0%
TGGCGTGCACATACGGTAAG+TGG - tig0023028:10624-10643 Msa1404120:intron 55.0%
TGTCGAAGTCCATGTGCTGC+TGG + tig0023028:11481-11500 None:intergenic 55.0%
AGCGTGAGAAGAGGGGGTGA+GGG + tig0023028:916-935 None:intergenic 60.0%
AAGCGTGAGAAGAGGGGGTG+AGG + tig0023028:917-936 None:intergenic 60.0%
CCACCATCTTCTCCGGTCAC+CGG + tig0023028:1157-1176 None:intergenic 60.0%
GACGTACACGTGGACGGTGA+TGG - tig0023028:1275-1294 Msa1404120:CDS 60.0%
!! CGTGGACGGTGATGGGTAGA+TGG - tig0023028:1283-1302 Msa1404120:CDS 60.0%
!! GGACGGTGATGGGTAGATGG+GGG - tig0023028:1286-1305 Msa1404120:CDS 60.0%
ACATGGGAGGAGCTCCTCCT+TGG - tig0023028:1309-1328 Msa1404120:CDS 60.0%
! TCCTTGGTGGGGCGGTTTTC+CGG - tig0023028:1325-1344 Msa1404120:CDS 60.0%
TCCAGTCTCGTGTCCCGTAC+CGG + tig0023028:1347-1366 None:intergenic 60.0%
GGCAGATAGGCCTTCCTTGG+TGG + tig0023028:8292-8311 None:intergenic 60.0%
TCCGGCAGATAGGCCTTCCT+TGG + tig0023028:8295-8314 None:intergenic 60.0%
GCAGCTGGAACCTGGGATTC+AGG + tig0023028:8351-8370 None:intergenic 60.0%
! CGGCAGATGGCGTTGAAACC+TGG + tig0023028:8635-8654 None:intergenic 60.0%
TCCTGGATCCCAGGTTCCAG+CGG - tig0023028:8899-8918 Msa1404120:intron 60.0%
GCAGCTGGAACCTGGGATTC+AGG + tig0023028:8351-8370 None:intergenic 60.0%
GCAGCTGGAACCTGGGATTC+AGG + tig0023028:8351-8370 None:intergenic 60.0%
CGGAAGATGCAGCTGGAACC+TGG + tig0023028:9463-9482 None:intergenic 60.0%
CCGGTGACCGGAGAAGATGG+TGG - tig0023028:1154-1173 Msa1404120:three_prime_UTR 65.0%
GGGTAGATGGGGGACATGGG+AGG - tig0023028:1296-1315 Msa1404120:CDS 65.0%
TGGGAGGAGCTCCTCCTTGG+TGG - tig0023028:1312-1331 Msa1404120:CDS 65.0%
GGGAGGAGCTCCTCCTTGGT+GGG - tig0023028:1313-1332 Msa1404120:CDS 65.0%
GGAGGAGCTCCTCCTTGGTG+GGG - tig0023028:1314-1333 Msa1404120:CDS 65.0%
GGAAAACCGCCCCACCAAGG+AGG + tig0023028:1326-1345 None:intergenic 65.0%
ACCGGAAAACCGCCCCACCA+AGG + tig0023028:1329-1348 None:intergenic 65.0%
! GGTGGGGCGGTTTTCCGGTA+CGG - tig0023028:1330-1349 Msa1404120:CDS 65.0%
! GTGGGGCGGTTTTCCGGTAC+GGG - tig0023028:1331-1350 Msa1404120:CDS 65.0%
TCCGGTACGGGACACGAGAC+TGG - tig0023028:1343-1362 Msa1404120:CDS 65.0%
CGAGACTGGAACGTCGTCGC+CGG - tig0023028:1357-1376 Msa1404120:CDS 65.0%
GGCAGACGCAGCTGGAACCT+GGG + tig0023028:8358-8377 None:intergenic 65.0%
GGCAGATGCCGCTGGAACCT+GGG + tig0023028:8910-8929 None:intergenic 65.0%
GGCAGACGCAGCTGGAACCT+GGG + tig0023028:8358-8377 None:intergenic 65.0%
GGAGCTCCTCCTTGGTGGGG+CGG - tig0023028:1317-1336 Msa1404120:CDS 70.0%
CGGCAGACGCAGCTGGAACC+TGG + tig0023028:8359-8378 None:intergenic 70.0%
GCCGCTGGAACCTGGGATCC+AGG + tig0023028:8903-8922 None:intergenic 70.0%
CGGCAGATGCCGCTGGAACC+TGG + tig0023028:8911-8930 None:intergenic 70.0%
CGGCAGACGCAGCTGGAACC+TGG + tig0023028:8359-8378 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
tig0023028 gene 865 12329 865 ID=Msa1404120;Name=Msa1404120
tig0023028 mRNA 865 12329 865 ID=Msa1404120-mRNA-1;Parent=Msa1404120;Name=Msa1404120-mRNA-1;_AED=0.04;_eAED=0.04;_QI=279|0.57|0.62|0.87|0.85|0.75|8|398|819
tig0023028 exon 865 1742 865 ID=Msa1404120-mRNA-1:exon:19626;Parent=Msa1404120-mRNA-1
tig0023028 exon 2556 2634 2556 ID=Msa1404120-mRNA-1:exon:19625;Parent=Msa1404120-mRNA-1
tig0023028 exon 3324 3358 3324 ID=Msa1404120-mRNA-1:exon:19624;Parent=Msa1404120-mRNA-1
tig0023028 exon 3428 5030 3428 ID=Msa1404120-mRNA-1:exon:19623;Parent=Msa1404120-mRNA-1
tig0023028 exon 5707 5787 5707 ID=Msa1404120-mRNA-1:exon:19622;Parent=Msa1404120-mRNA-1
tig0023028 exon 6106 6155 6106 ID=Msa1404120-mRNA-1:exon:19621;Parent=Msa1404120-mRNA-1
tig0023028 exon 11769 11920 11769 ID=Msa1404120-mRNA-1:exon:19620;Parent=Msa1404120-mRNA-1
tig0023028 exon 12071 12329 12071 ID=Msa1404120-mRNA-1:exon:19619;Parent=Msa1404120-mRNA-1
tig0023028 five_prime_UTR 12071 12329 12071 ID=Msa1404120-mRNA-1:five_prime_utr;Parent=Msa1404120-mRNA-1
tig0023028 five_prime_UTR 11901 11920 11901 ID=Msa1404120-mRNA-1:five_prime_utr;Parent=Msa1404120-mRNA-1
tig0023028 CDS 11769 11900 11769 ID=Msa1404120-mRNA-1:cds;Parent=Msa1404120-mRNA-1
tig0023028 CDS 6106 6155 6106 ID=Msa1404120-mRNA-1:cds;Parent=Msa1404120-mRNA-1
tig0023028 CDS 5707 5787 5707 ID=Msa1404120-mRNA-1:cds;Parent=Msa1404120-mRNA-1
tig0023028 CDS 3428 5030 3428 ID=Msa1404120-mRNA-1:cds;Parent=Msa1404120-mRNA-1
tig0023028 CDS 3324 3358 3324 ID=Msa1404120-mRNA-1:cds;Parent=Msa1404120-mRNA-1
tig0023028 CDS 2556 2634 2556 ID=Msa1404120-mRNA-1:cds;Parent=Msa1404120-mRNA-1
tig0023028 CDS 1263 1742 1263 ID=Msa1404120-mRNA-1:cds;Parent=Msa1404120-mRNA-1
tig0023028 three_prime_UTR 865 1262 865 ID=Msa1404120-mRNA-1:three_prime_utr;Parent=Msa1404120-mRNA-1
Gene Sequence

>Msa1404120

ATGGGTAGATGGGGGACATGGGAGGAGCTCCTCCTTGGTGGGGCGGTTTTCCGGTACGGGACACGAGACTGGAACGTCGTCGCCGGTGAACTCCGAGAACGCATTGATTGTCCTATCCCTTTTACCCCTGAGGTCTGTAAAGCTAAGTATGAAGATTTGCAACAACGGTATTCTGGGAGCACGGATTTTTTGTATGAGGAGCTTAGGAAAAGAAGAGTAGAAGAGCTAAAGAAAGCTATTGAGCGCTCTGGAGATTCAATTGGGTCTCTTAAATCAAAGATTGAAGACCTTGAGGCTGAGAAGAATGAGGAAAAAGATGATTGTGAAAATGGCTTAGAAATTCCAGCATCACATTTACCTTCACAGAAATTGGAGAGAGTTAAATCTTCCACCAAGGAAGGCCTATCTGCCGGAAGTTTCACTCATGAAACGAGGACAAACTGGTTTCCTGAATCCCAGGTTCCAGCTGCGTCTGCCGATGATAACGAGACTAAGCCTGAAGTTTCACAATCTACTGAGCAGGATAAAGTTTCGCAATCAAAGCTTGAAGTCCTCAAGGTTGAGAAGAAGGATAAAAATCATGACTGTGAAAATGGCTTAGAAAGTCCCGTATCACATTTACCTTCCCAGAAATTGGAGAGAGTTAAATCTTCCACCAAGGAAACATCGAAGGATGGCCTATCTGCCGGAAGTTTCACTCACGAAATGAGGACAAACTGGTCTCCTGAATCCCAGGTTTCAACGCCATCTGCCGATAATAACGAAACTAAGCTTGAAGTTTTGCAATCTACTGAGCAGGCTGAAGTTTTGCAATCAAAGCTTGAAGTCCTCAAAGCTGAGAAGAACGAGAAAAAACATGGTTGTGAAAATGGCTTAGAAAGTCCCATATCACATGTACCTTCGCAGAAATTGGAGAGAGTTAAATCTTGCACTAAAGAAACATCAAAGGATGGCCTATCTGCCGGAAGTTTCACTCACAAAACGAGGACAAACTGGTCTCCTGGATCCCAGGTTCCAGCGGCATCTGCCGATGATAACGAGACTAAGCCTGAAGTTTTGCAATCTACCGAGCAGGCTAAAGTTTCGCAATCAAAGCTTGAAGTCCTCAAGGCCGAGCAGAATGAGAAAAAAGATGATTGTGAAAATGGCTTAGAAAGTCCAGTATCACATTTACCATCCCAGAAATTGGAGAGAGTTAAAACTTCCACTAAAGAAACATCAAAGGATGGCCTATCTGCCGGAAGTTTCACACACGAAACAAGGACAAACTGGTCTCCTGAATCCCAGGTTCCAGCTGCGTCTGCCGATGATAACGAGACTAAGCCTGAAGTTTCACAATCTACTGAGCAGGATAAAGTTTCGCGACCAAAGCTTGAATTCCTCATGGATGAGAAGAATGAGAAAAAAGATGATTGTGAAAATGGCTTAGAAAGTCCAGTATCACATTTACCATCCCAGAAATTGGTGAGAGTTGAATCTTCCGCTAAAGAGACATCAAAGGAAGGATTATCTGTCGGGAGTTTCACACACGAAACAAGGACAAACTGGTCTCCTGAATCCCAGGTTCCAGCTGCATCTTCCGATGATAATGAAACTAAGCCAGAAGTTTCACATTCTACTAAGCAGGCTAAAGTTTTGAATGGAGATAATTTGGAACTTACTTTATATGAAATACAAGTAGGATGTCGTAAAAAACGGAGAGGGAAGAGAAAAAGGAAGGATTGTGGAAGAAATATTATGGAAGTGGCAAGTCTAGAAGAAAGTGATGTATTAGATTCAGCTGATGTTATGTCCTGGCGTAAAGAAAGTTCTACTAGTAACTGTTGTGAAGTTGCCAAATCTTCTGCTCATGTAGACAATAAAAAAGTGCATCTGCCTTCCGTCGAAGACTTGATGGTCAGTATTTGCACCAAACCATTTAACCTAATTCTAAAATGGGCTAGAGGTACCCATAGAAGATGGAAATGGCGTGCACATACGAAAAGAGGAAAGTACAAGAAAATGATCCAGCAGCACATGGACTTCGACACTATAAGGTCAAGAATTAGCAGCCGAACAATTGAATCAACCAGAGAACTATACCGAGACTTGCTGCTACTCACCAACAATGCCCTAGTCTTCTACTCGAAGATCACTCGTGAATATAAAACTGCTCTCCTTCTAAGAGGCATAGTCGCCAAAAAAATGAGGGAGAGTTTCAAGGGTAGTACTAGTAGCAGCAACAAAGTCACTGAGCCTAATGAGTCTACGAAATTACCAGTGCATCATAATCTTCATGTGAAACCAAGAAGTGTAAGACCAGGCAACAGAAAAATCATTGCAAAGGCTGTTGGTGGCGACAACTCTGCATCTTCACAAGGAGCTAAGAAGCCCATTAAAGCCGATTCTTCACATTCTGTGGAATCCTTAAATGTCATGAAGAAGAAGCTTTTGGTAGACAGAAAAAAGTCGGACCTGTGA
Protein sequence

>Msa1404120

MGRWGTWEELLLGGAVFRYGTRDWNVVAGELRERIDCPIPFTPEVCKAKYEDLQQRYSGSTDFLYEELRKRRVEELKKAIERSGDSIGSLKSKIEDLEAEKNEEKDDCENGLEIPASHLPSQKLERVKSSTKEGLSAGSFTHETRTNWFPESQVPAASADDNETKPEVSQSTEQDKVSQSKLEVLKVEKKDKNHDCENGLESPVSHLPSQKLERVKSSTKETSKDGLSAGSFTHEMRTNWSPESQVSTPSADNNETKLEVLQSTEQAEVLQSKLEVLKAEKNEKKHGCENGLESPISHVPSQKLERVKSCTKETSKDGLSAGSFTHKTRTNWSPGSQVPAASADDNETKPEVLQSTEQAKVSQSKLEVLKAEQNEKKDDCENGLESPVSHLPSQKLERVKTSTKETSKDGLSAGSFTHETRTNWSPESQVPAASADDNETKPEVSQSTEQDKVSRPKLEFLMDEKNEKKDDCENGLESPVSHLPSQKLVRVESSAKETSKEGLSVGSFTHETRTNWSPESQVPAASSDDNETKPEVSHSTKQAKVLNGDNLELTLYEIQVGCRKKRRGKRKRKDCGRNIMEVASLEESDVLDSADVMSWRKESSTSNCCEVAKSSAHVDNKKVHLPSVEDLMVSICTKPFNLILKWARGTHRRWKWRAHTKRGKYKKMIQQHMDFDTIRSRISSRTIESTRELYRDLLLLTNNALVFYSKITREYKTALLLRGIVAKKMRESFKGSTSSSNKVTEPNESTKLPVHHNLHVKPRSVRPGNRKIIAKAVGGDNSASSQGAKKPIKADSSHSVESLNVMKKKLLVDRKKSDL*