Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192070 | XP_003593568.1 | 99.051 | 316 | 3 | 0 | 1 | 316 | 1 | 316 | 0.0 | 642 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192070 | sp|Q9UET6|TRM7_HUMAN | 59.000 | 300 | 105 | 2 | 1 | 300 | 1 | 282 | 1.81e-116 | 342 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192070 | G7IPS4 | 99.051 | 316 | 3 | 0 | 1 | 316 | 1 | 316 | 0.0 | 642 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0114600 | Msa0192070 | 0.807246 | 5.550121e-50 | -8.615850e-47 |
| Msa0192070 | Msa0272520 | 0.862994 | 3.416188e-64 | -8.615850e-47 |
| Msa0192070 | Msa0981780 | 0.860795 | 1.609903e-63 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192070 | MtrunA17_Chr2g0282131 | 99.051 | 316 | 3 | 0 | 1 | 316 | 1 | 316 | 0.0 | 642 |
| Msa0192070 | MtrunA17_Chr4g0040381 | 33.473 | 239 | 137 | 7 | 1 | 230 | 1 | 226 | 7.94e-35 | 134 |
| Msa0192070 | MtrunA17_Chr4g0035141 | 33.333 | 225 | 131 | 6 | 12 | 230 | 15 | 226 | 1.58e-32 | 127 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0192070 | AT5G01230.1 | 92.508 | 307 | 22 | 1 | 1 | 306 | 1 | 307 | 0.0 | 586 |
| Msa0192070 | AT5G01230.2 | 100.000 | 57 | 0 | 0 | 1 | 57 | 1 | 57 | 5.69e-35 | 122 |
| Msa0192070 | AT4G25730.1 | 34.167 | 240 | 134 | 8 | 1 | 231 | 1 | 225 | 2.25e-34 | 133 |
Find 113 sgRNAs with CRISPR-Local
Find 360 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTGCAGTGATAATATTTA+TGG | 0.099808 | 2_1:+7810368 | Msa0192070:three_prime_UTR |
| CACTGATTCGTAGTGTTATT+TGG | 0.132341 | 2_1:+7810332 | Msa0192070:three_prime_UTR |
| AATGGGATATACACCTTATT+AGG | 0.161234 | 2_1:-7810105 | None:intergenic |
| ATCGGAAAAGTTTATAAGTT+TGG | 0.192523 | 2_1:-7810494 | None:intergenic |
| AGGAATAATTTGTATTCATT+TGG | 0.244032 | 2_1:-7810457 | None:intergenic |
| TTTGTTGGATAGTTTGATTC+AGG | 0.249399 | 2_1:+7805022 | Msa0192070:five_prime_UTR |
| AGAAGCCGATGAAGATCTTT+TGG | 0.261957 | 2_1:-7809750 | None:intergenic |
| CTAGCTTGCGGGGACCTTAC+TGG | 0.280561 | 2_1:+7810129 | Msa0192070:CDS |
| TCGGAAAAGTTTATAAGTTT+GGG | 0.305571 | 2_1:-7810493 | None:intergenic |
| GTTTGGGTTATGATTATCTA+AGG | 0.309017 | 2_1:-7810477 | None:intergenic |
| TTCATTGCGAAAATATTTAG+AGG | 0.311679 | 2_1:+7808598 | Msa0192070:CDS |
| ATATCCCATTTCTAGCTTGC+GGG | 0.337528 | 2_1:+7810118 | Msa0192070:CDS |
| GGAATAATTTGTATTCATTT+GGG | 0.341056 | 2_1:-7810456 | None:intergenic |
| AACTCTAGAGCTCTCTTGTA+AGG | 0.363418 | 2_1:-7810240 | None:intergenic |
| TGCTCCAGGCAGCTGGAGTC+AGG | 0.367296 | 2_1:+7805640 | Msa0192070:CDS |
| TGTGATTCTGTGAAATTTGT+TGG | 0.370019 | 2_1:+7805007 | Msa0192070:five_prime_UTR |
| GCATCAGGTGCAAGCTTGGC+TGG | 0.374216 | 2_1:-7806603 | None:intergenic |
| GCAAAGCTTCAAGGGATAAG+AGG | 0.379131 | 2_1:+7805201 | Msa0192070:CDS |
| ATTTAATTTGCATCATAAAC+CGG | 0.395472 | 2_1:-7804845 | None:intergenic |
| CTTTGCATCAGGTGCAAGCT+TGG | 0.398733 | 2_1:-7806607 | None:intergenic |
| TATCCACTGCCTAAAGTTGC+TGG | 0.400318 | 2_1:+7810171 | Msa0192070:CDS |
| CAAATACCTGACAGTATAGA+AGG | 0.404894 | 2_1:-7808633 | None:intergenic |
| AGGTCCCCGCAAGCTAGAAA+TGG | 0.414251 | 2_1:-7810123 | None:intergenic |
| GAGAAGGTTGGAAGTCCATC+AGG | 0.420443 | 2_1:+7809774 | Msa0192070:CDS |
| ACTAAAGTTCTTACCTATGC+TGG | 0.426966 | 2_1:-7809335 | None:intergenic |
| CAGCCAATGGCTCCGATTGA+AGG | 0.431915 | 2_1:+7807106 | Msa0192070:CDS |
| ATGGGATATACACCTTATTA+GGG | 0.432233 | 2_1:-7810104 | None:intergenic |
| ATAGTTTGATTCAGGAGAAA+AGG | 0.443837 | 2_1:+7805030 | Msa0192070:five_prime_UTR |
| TGGAAAACTTACTTTGCATC+AGG | 0.444078 | 2_1:-7806618 | None:intergenic |
| AAATCAATAGCTACAATAAG+AGG | 0.445424 | 2_1:-7807082 | None:intergenic |
| TATGTGCTGCTCCAGGCAGC+TGG | 0.452462 | 2_1:+7805633 | Msa0192070:CDS |
| TGCTTACTGCAAGTATGAGT+TGG | 0.458021 | 2_1:-7808197 | None:intergenic |
| AAACCATGGGCAAAGCTTCA+AGG | 0.459913 | 2_1:+7805192 | Msa0192070:exon |
| GAGTTTGCAGATTGTGTTAG+TGG | 0.463559 | 2_1:+7810069 | Msa0192070:intron |
| CATCGGCTTCTTGAGAAGGT+TGG | 0.470461 | 2_1:+7809762 | Msa0192070:CDS |
| CAACAAAAGACTCGGAAGAA+AGG | 0.471356 | 2_1:-7810432 | None:intergenic |
| TTCATCCATGTCATGAAGTC+CGG | 0.472049 | 2_1:-7808163 | None:intergenic |
| ATCAGTGGATATGCAAGATC+AGG | 0.472705 | 2_1:-7810316 | None:intergenic |
| TTACTGGATATGATTCTGAT+AGG | 0.474435 | 2_1:+7810145 | Msa0192070:CDS |
| ATCCCTTGAAGCTTTGCCCA+TGG | 0.475121 | 2_1:-7805195 | None:intergenic |
| GCTTACTGCAAGTATGAGTT+GGG | 0.475427 | 2_1:-7808196 | None:intergenic |
| TGAAGGTGTTATCCAGGTGC+AGG | 0.479392 | 2_1:+7807123 | Msa0192070:CDS |
| GGCTTTGCAAAAGTCACCAC+AGG | 0.483167 | 2_1:-7809295 | None:intergenic |
| TGCGAAAATATTTAGAGGAA+AGG | 0.486906 | 2_1:+7808603 | Msa0192070:CDS |
| ATCCACTGCCTAAAGTTGCT+GGG | 0.488195 | 2_1:+7810172 | Msa0192070:CDS |
| CCATCAGGGGTAGATGATAC+AGG | 0.496409 | 2_1:+7809789 | Msa0192070:CDS |
| AGCTATTGATTTGCAGCCAA+TGG | 0.497084 | 2_1:+7807093 | Msa0192070:CDS |
| TATATCCCATTTCTAGCTTG+CGG | 0.497714 | 2_1:+7810117 | Msa0192070:CDS |
| TCTTCATCGGCTTCTTGAGA+AGG | 0.501095 | 2_1:+7809758 | Msa0192070:CDS |
| AGTACCTGACTCCAGCTGCC+TGG | 0.508337 | 2_1:-7805644 | None:intergenic |
| ACACCTTCAATCGGAGCCAT+TGG | 0.510050 | 2_1:-7807109 | None:intergenic |
| TTGGATTGAATCCTTCTGGA+GGG | 0.511479 | 2_1:-7809731 | None:intergenic |
| GGGGCAATAGGAGGTTGTAC+TGG | 0.511552 | 2_1:-7810216 | None:intergenic |
| GTGGTTGGAAGGCCCTAATA+AGG | 0.511729 | 2_1:+7810092 | Msa0192070:CDS |
| GGTCCCCGCAAGCTAGAAAT+GGG | 0.513086 | 2_1:-7810122 | None:intergenic |
| TCCGATTGAAGGTGTTATCC+AGG | 0.517786 | 2_1:+7807117 | Msa0192070:CDS |
| TAGTTATATCACCCTGCACC+TGG | 0.518978 | 2_1:-7807135 | None:intergenic |
| CACAAGCCTTCTATACTGTC+AGG | 0.519250 | 2_1:+7808627 | Msa0192070:CDS |
| TATCAGAATCATATCCAGTA+AGG | 0.519570 | 2_1:-7810143 | None:intergenic |
| ATTGAAGAAGCCATGAACTT+AGG | 0.519813 | 2_1:-7804900 | None:intergenic |
| ATATGCAAGATCAGGAATCC+AGG | 0.523232 | 2_1:-7810308 | None:intergenic |
| CAGGTGCAAGCTTGGCTGGA+AGG | 0.527605 | 2_1:-7806599 | None:intergenic |
| ACTCTAGAGCTCTCTTGTAA+GGG | 0.527637 | 2_1:-7810239 | None:intergenic |
| TCAATCCAAAAGATCTTCAT+CGG | 0.528148 | 2_1:+7809745 | Msa0192070:CDS |
| GTAGATTTATGTGCTGCTCC+AGG | 0.528472 | 2_1:+7805626 | Msa0192070:CDS |
| TGTGTTAGTGGGTGGTTGGA+AGG | 0.530748 | 2_1:+7810081 | Msa0192070:CDS |
| ACCTGGATAACACCTTCAAT+CGG | 0.534040 | 2_1:-7807118 | None:intergenic |
| TGGATTGAATCCTTCTGGAG+GGG | 0.538206 | 2_1:-7809730 | None:intergenic |
| TACCGAAAAGCGAAAGAAGA+AGG | 0.538413 | 2_1:+7805321 | Msa0192070:CDS |
| GCCGACCTTGTTGTGTGCGA+TGG | 0.542550 | 2_1:+7807896 | Msa0192070:CDS |
| AACCATGGGCAAAGCTTCAA+GGG | 0.544253 | 2_1:+7805193 | Msa0192070:exon |
| AGTTTGCAGATTGTGTTAGT+GGG | 0.550426 | 2_1:+7810070 | Msa0192070:intron |
| CCTGTATCATCTACCCCTGA+TGG | 0.551247 | 2_1:-7809789 | None:intergenic |
| AGATTGTGTTAGTGGGTGGT+TGG | 0.553179 | 2_1:+7810077 | Msa0192070:intron |
| AGTAGTCGTAATTCCAGCAT+AGG | 0.557095 | 2_1:+7809322 | Msa0192070:CDS |
| TCCACTGCCTAAAGTTGCTG+GGG | 0.574703 | 2_1:+7810173 | Msa0192070:CDS |
| GAAAATTACTCCCCTCCAGA+AGG | 0.574957 | 2_1:+7809720 | Msa0192070:CDS |
| TTGCAGATTGTGTTAGTGGG+TGG | 0.575776 | 2_1:+7810073 | Msa0192070:intron |
| CTCTAGAGCTCTCTTGTAAG+GGG | 0.577035 | 2_1:-7810238 | None:intergenic |
| GAAAAGCGAAAGAAGAAGGT+TGG | 0.578774 | 2_1:+7805325 | Msa0192070:CDS |
| CAAAGCTTCAAGGGATAAGA+GGG | 0.579751 | 2_1:+7805202 | Msa0192070:CDS |
| CTCATGTACTGAAGGAAGGA+GGG | 0.582274 | 2_1:+7808572 | Msa0192070:CDS |
| AGAACTTGAAAATCTCTCCC+TGG | 0.583460 | 2_1:+7810290 | Msa0192070:CDS |
| GTGTGCGATGGTGCTCCTGA+TGG | 0.586485 | 2_1:+7807908 | Msa0192070:CDS |
| TATCCCATTTCTAGCTTGCG+GGG | 0.586932 | 2_1:+7810119 | Msa0192070:CDS |
| TAATGCTCGGACTGCTGAAG+TGG | 0.587470 | 2_1:+7807156 | Msa0192070:CDS |
| GTTTCTTAGGCAAGTAAGTG+AGG | 0.591445 | 2_1:+7805166 | Msa0192070:intron |
| AATTGTTACTCATGTACTGA+AGG | 0.593299 | 2_1:+7808564 | Msa0192070:CDS |
| GTTACTCATGTACTGAAGGA+AGG | 0.596222 | 2_1:+7808568 | Msa0192070:CDS |
| TTTGGATTGAATCCTTCTGG+AGG | 0.598385 | 2_1:-7809732 | None:intergenic |
| GAAGAAGCCATGAACTTAGG+AGG | 0.598700 | 2_1:-7804897 | None:intergenic |
| CTAGAGCTCTCTTGTAAGGG+GGG | 0.605069 | 2_1:-7810236 | None:intergenic |
| ATTTGGGACAACAAAAGACT+CGG | 0.605473 | 2_1:-7810440 | None:intergenic |
| AGAAGGTTGGAAGTCCATCA+GGG | 0.611108 | 2_1:+7809775 | Msa0192070:CDS |
| CAAATAACACTACGAATCAG+TGG | 0.612508 | 2_1:-7810331 | None:intergenic |
| ACTCATGTACTGAAGGAAGG+AGG | 0.615741 | 2_1:+7808571 | Msa0192070:CDS |
| ACATTATCAACATTATCCAT+CGG | 0.623898 | 2_1:-7810512 | None:intergenic |
| ACCATCGCACACAACAAGGT+CGG | 0.624891 | 2_1:-7807897 | None:intergenic |
| AGTAAGTGAGGAATAAACCA+TGG | 0.627845 | 2_1:+7805178 | Msa0192070:exon |
| TATGCAAGATCAGGAATCCA+GGG | 0.628400 | 2_1:-7810307 | None:intergenic |
| GAGCACCATCGCACACAACA+AGG | 0.633636 | 2_1:-7807901 | None:intergenic |
| TCTAGAGCTCTCTTGTAAGG+GGG | 0.635566 | 2_1:-7810237 | None:intergenic |
| ATAATATGAGTAAAATTGTG+AGG | 0.639750 | 2_1:+7810577 | Msa0192070:three_prime_UTR |
| GAAGGTGTTATCCAGGTGCA+GGG | 0.645167 | 2_1:+7807124 | Msa0192070:CDS |
| AGGGTGATATAACTAATGCT+CGG | 0.647655 | 2_1:+7807143 | Msa0192070:CDS |
| GTAAGTGAGGAATAAACCAT+GGG | 0.651712 | 2_1:+7805179 | Msa0192070:exon |
| AAAGACTCGGAAGAAAGGAA+AGG | 0.655032 | 2_1:-7810427 | None:intergenic |
| GCTTTGCAAAAGTCACCACA+GGG | 0.664958 | 2_1:-7809294 | None:intergenic |
| TAGAGCTCTCTTGTAAGGGG+GGG | 0.669752 | 2_1:-7810235 | None:intergenic |
| CCACTGCCTAAAGTTGCTGG+GGG | 0.698850 | 2_1:+7810174 | Msa0192070:CDS |
| AGAATCTCGTACAGTGTACG+AGG | 0.708517 | 2_1:-7804925 | None:intergenic |
| AGTTACCGGACTTCATGACA+TGG | 0.714363 | 2_1:+7808158 | Msa0192070:intron |
| GAAGGTTGGAAGTCCATCAG+GGG | 0.734678 | 2_1:+7809776 | Msa0192070:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTTATATAAATGAAAACTTT+GGG | - | chr2_1:7806206-7806225 | None:intergenic | 10.0% |
| !!! | TTTTATATAAATGAAAACTT+TGG | - | chr2_1:7806207-7806226 | None:intergenic | 10.0% |
| !!! | TAAATTTTTAAAGTATTATC+CGG | - | chr2_1:7806552-7806571 | None:intergenic | 10.0% |
| !!! | TGTTCTTTTTTTTTTTTTGT+TGG | + | chr2_1:7805248-7805267 | Msa0192070:intron | 15.0% |
| !!! | TTTTTTTTTTGTTGGTTTTT+TGG | + | chr2_1:7805256-7805275 | Msa0192070:intron | 15.0% |
| !!! | TTTTTTTTTGTTGGTTTTTT+GGG | + | chr2_1:7805257-7805276 | Msa0192070:intron | 15.0% |
| !! | CTATATCTAATTATATATTC+AGG | - | chr2_1:7805503-7805522 | None:intergenic | 15.0% |
| !! | AATTACATTTAAATGATACT+AGG | - | chr2_1:7805810-7805829 | None:intergenic | 15.0% |
| !!! | CTTAAAGTGAATTATATTTT+AGG | - | chr2_1:7806053-7806072 | None:intergenic | 15.0% |
| !! | CTAAAATATAATTCACTTTA+AGG | + | chr2_1:7806051-7806070 | Msa0192070:intron | 15.0% |
| !! | TTATATAAATGAAAACTTTG+GGG | - | chr2_1:7806205-7806224 | None:intergenic | 15.0% |
| !!! | TACTTTAAAAATTTATATGC+AGG | + | chr2_1:7806557-7806576 | Msa0192070:intron | 15.0% |
| !! | GAAAAAAGAAAAAGAAATTA+AGG | - | chr2_1:7807552-7807571 | None:intergenic | 15.0% |
| !! | AAAAAAAATAGTAACAAACA+AGG | - | chr2_1:7809363-7809382 | None:intergenic | 15.0% |
| !! | TATTAGATTTGAATCTTTAA+CGG | + | chr2_1:7809583-7809602 | Msa0192070:intron | 15.0% |
| !!! | ATTTAATTTGCATCATAAAC+CGG | - | chr2_1:7804848-7804867 | None:intergenic | 20.0% |
| !!! | TTTTTTTTGTTGGTTTTTTG+GGG | + | chr2_1:7805258-7805277 | Msa0192070:intron | 20.0% |
| !!! | GAAGAATTTAACATTTTTGA+AGG | + | chr2_1:7805384-7805403 | Msa0192070:CDS | 20.0% |
| !! | ATAATTAAAATCAGCTTTCA+AGG | - | chr2_1:7805423-7805442 | None:intergenic | 20.0% |
| !! | ATTCTTAAGATAAGTTTAAG+AGG | - | chr2_1:7805948-7805967 | None:intergenic | 20.0% |
| !!! | AATATAATTCACTTTAAGGA+AGG | + | chr2_1:7806055-7806074 | Msa0192070:intron | 20.0% |
| !! | TATATAAATGAAAACTTTGG+GGG | - | chr2_1:7806204-7806223 | None:intergenic | 20.0% |
| !! | TAAAAAAGATAACACCATTA+CGG | + | chr2_1:7806386-7806405 | Msa0192070:intron | 20.0% |
| !!! | AAAAGGATACTATAGTTTTA+AGG | - | chr2_1:7806731-7806750 | None:intergenic | 20.0% |
| !! | CAATAAATTCAAAAGAAAAC+AGG | - | chr2_1:7806896-7806915 | None:intergenic | 20.0% |
| !! | TTAATGTATTAGAATTGACA+TGG | - | chr2_1:7808076-7808095 | None:intergenic | 20.0% |
| !! | TTGGTTGTAGTTTAAAAATT+TGG | + | chr2_1:7808122-7808141 | Msa0192070:intron | 20.0% |
| !!! | TGTAACTATTTATCTCTTTT+AGG | + | chr2_1:7808244-7808263 | Msa0192070:intron | 20.0% |
| !!! | TGATAGTTGATATTTCATTA+TGG | + | chr2_1:7808284-7808303 | Msa0192070:intron | 20.0% |
| !!! | GGTGTATAGTTTAATTTAAA+CGG | + | chr2_1:7808439-7808458 | Msa0192070:intron | 20.0% |
| !! | AGTTATAAAAGCTAACTAAA+AGG | - | chr2_1:7808756-7808775 | None:intergenic | 20.0% |
| !!! | TCATTTCTGGAAATAAATTA+TGG | + | chr2_1:7808794-7808813 | Msa0192070:intron | 20.0% |
| !!! | GACAAAATAATTGACTTTAA+AGG | + | chr2_1:7808962-7808981 | Msa0192070:intron | 20.0% |
| !! | TGCTAAATAACTCATAATAA+AGG | + | chr2_1:7809179-7809198 | Msa0192070:intron | 20.0% |
| !! | GCTAAATAACTCATAATAAA+GGG | + | chr2_1:7809180-7809199 | Msa0192070:intron | 20.0% |
| !! | CTAAATAACTCATAATAAAG+GGG | + | chr2_1:7809181-7809200 | Msa0192070:intron | 20.0% |
| !!! | GTATATGGAATTATGATTTT+TGG | - | chr2_1:7809239-7809258 | None:intergenic | 20.0% |
| !! | AGTTTCTTTATGAATTGTTA+TGG | + | chr2_1:7809413-7809432 | Msa0192070:intron | 20.0% |
| !!! | TCATGTATACTTAATTTTCA+TGG | + | chr2_1:7810019-7810038 | Msa0192070:intron | 20.0% |
| !!! | GGAATAATTTGTATTCATTT+GGG | - | chr2_1:7810459-7810478 | None:intergenic | 20.0% |
| !!! | AGGAATAATTTGTATTCATT+TGG | - | chr2_1:7810460-7810479 | None:intergenic | 20.0% |
| !!! | GTTGTATGTTTTTGTTTCTT+AGG | + | chr2_1:7805153-7805172 | Msa0192070:intron | 25.0% |
| ! | TGATTTGATGTTAGCTAAAT+TGG | + | chr2_1:7805282-7805301 | Msa0192070:intron | 25.0% |
| ! | ATTACTATCTCTGCTAAAAA+TGG | - | chr2_1:7805471-7805490 | None:intergenic | 25.0% |
| ! | TGAAACTATAAGTAATACAG+TGG | - | chr2_1:7805573-7805592 | None:intergenic | 25.0% |
| ! | TGTAATTGACATGAATATCT+TGG | + | chr2_1:7805823-7805842 | Msa0192070:intron | 25.0% |
| ! | TAAGATAAGTTTAAGAGGAA+GGG | - | chr2_1:7805943-7805962 | None:intergenic | 25.0% |
| ! | TTAAGATAAGTTTAAGAGGA+AGG | - | chr2_1:7805944-7805963 | None:intergenic | 25.0% |
| !! | AACAGCAAATGATTTTTGAT+GGG | - | chr2_1:7806362-7806381 | None:intergenic | 25.0% |
| !! | AAACAGCAAATGATTTTTGA+TGG | - | chr2_1:7806363-7806382 | None:intergenic | 25.0% |
| ! | TATTGCCATGTATAAACAAT+AGG | + | chr2_1:7806472-7806491 | Msa0192070:intron | 25.0% |
| ! | ATTGCCATGTATAAACAATA+GGG | + | chr2_1:7806473-7806492 | Msa0192070:intron | 25.0% |
| !! | ACTATAGTATCCTTTTATGT+TGG | + | chr2_1:7806735-7806754 | Msa0192070:intron | 25.0% |
| ! | ATAATTACGACCAACATAAA+AGG | - | chr2_1:7806748-7806767 | None:intergenic | 25.0% |
| ! | AAACAATGTTTAAAAGGATG+AGG | - | chr2_1:7806869-7806888 | None:intergenic | 25.0% |
| ! | GGAAGAAAACAATGTTTAAA+AGG | - | chr2_1:7806875-7806894 | None:intergenic | 25.0% |
| ! | TGCTGTATTATCTTATGTTA+AGG | + | chr2_1:7806952-7806971 | Msa0192070:intron | 25.0% |
| ! | AAATCAATAGCTACAATAAG+AGG | - | chr2_1:7807085-7807104 | None:intergenic | 25.0% |
| !!! | TGTTTCTGCTCTAAAATTTA+TGG | + | chr2_1:7807408-7807427 | Msa0192070:intron | 25.0% |
| ! | AGTGAAATAATGAAAAGACA+TGG | + | chr2_1:7807617-7807636 | Msa0192070:intron | 25.0% |
| ! | ATACATTAACTCTGATATGT+AGG | + | chr2_1:7808087-7808106 | Msa0192070:intron | 25.0% |
| !! | ATTTCATTATGGTTACCTTT+TGG | + | chr2_1:7808295-7808314 | Msa0192070:intron | 25.0% |
| ! | AACAAGCATATGTCTATTAA+AGG | - | chr2_1:7808362-7808381 | None:intergenic | 25.0% |
| ! | CGCATTTATTAGATTAGATA+AGG | - | chr2_1:7808404-7808423 | None:intergenic | 25.0% |
| ! | TTCATTGCGAAAATATTTAG+AGG | + | chr2_1:7808598-7808617 | Msa0192070:CDS | 25.0% |
| ! | TATAAAAGCTAACTAAAAGG+TGG | - | chr2_1:7808753-7808772 | None:intergenic | 25.0% |
| !! | ATTACTTCCATTGTTTTCAA+AGG | - | chr2_1:7808845-7808864 | None:intergenic | 25.0% |
| !!! | CAATTATTTTGTCAACCAAT+TGG | - | chr2_1:7808955-7808974 | None:intergenic | 25.0% |
| !!! | AGTTATATTTTAACTCCTAC+AGG | - | chr2_1:7809040-7809059 | None:intergenic | 25.0% |
| ! | ATTTAGATATGATCATGAGT+AGG | - | chr2_1:7809118-7809137 | None:intergenic | 25.0% |
| ! | ACAAAAAGCAACTTAGTATA+TGG | - | chr2_1:7809254-7809273 | None:intergenic | 25.0% |
| !! | ATTTTCCATAGCTTAGTAAT+TGG | + | chr2_1:7809440-7809459 | Msa0192070:intron | 25.0% |
| ! | ATCTAATAATTGCAAGTGTT+TGG | - | chr2_1:7809571-7809590 | None:intergenic | 25.0% |
| ! | TGATTAACAATCTACATGTA+GGG | - | chr2_1:7809923-7809942 | None:intergenic | 25.0% |
| ! | ATGATTAACAATCTACATGT+AGG | - | chr2_1:7809924-7809943 | None:intergenic | 25.0% |
| !!! | TTAAAAAAAGCATCAACTCA+AGG | + | chr2_1:7810261-7810280 | Msa0192070:CDS | 25.0% |
| ! | TCTTGCAGTGATAATATTTA+TGG | + | chr2_1:7810368-7810387 | Msa0192070:three_prime_UTR | 25.0% |
| ! | TCGGAAAAGTTTATAAGTTT+GGG | - | chr2_1:7810496-7810515 | None:intergenic | 25.0% |
| ! | ATCGGAAAAGTTTATAAGTT+TGG | - | chr2_1:7810497-7810516 | None:intergenic | 25.0% |
| !! | AAACTTATAAACTTTTCCGA+TGG | + | chr2_1:7810496-7810515 | Msa0192070:three_prime_UTR | 25.0% |
| ! | ACATTATCAACATTATCCAT+CGG | - | chr2_1:7810515-7810534 | None:intergenic | 25.0% |
| TAGAACACAAAAACGAATAC+AGG | - | chr2_1:7804981-7805000 | None:intergenic | 30.0% | |
| TGTGATTCTGTGAAATTTGT+TGG | + | chr2_1:7805007-7805026 | Msa0192070:five_prime_UTR | 30.0% | |
| TTTGTTGGATAGTTTGATTC+AGG | + | chr2_1:7805022-7805041 | Msa0192070:five_prime_UTR | 30.0% | |
| ATAGTTTGATTCAGGAGAAA+AGG | + | chr2_1:7805030-7805049 | Msa0192070:five_prime_UTR | 30.0% | |
| AATGTCTCAGAAATAGTGAA+AGG | + | chr2_1:7805528-7805547 | Msa0192070:intron | 30.0% | |
| !!! | TCAATTTCGTTCTTTTTTGC+AGG | + | chr2_1:7805590-7805609 | Msa0192070:intron | 30.0% |
| !!! | CAATTTCGTTCTTTTTTGCA+GGG | + | chr2_1:7805591-7805610 | Msa0192070:intron | 30.0% |
| !!! | AATTTCGTTCTTTTTTGCAG+GGG | + | chr2_1:7805592-7805611 | Msa0192070:intron | 30.0% |
| CAATTACCAAACACAAACTA+TGG | + | chr2_1:7805726-7805745 | Msa0192070:intron | 30.0% | |
| ATCTTGGTTTAGATTTCTTC+TGG | + | chr2_1:7805839-7805858 | Msa0192070:intron | 30.0% | |
| AAGATAAGTTTAAGAGGAAG+GGG | - | chr2_1:7805942-7805961 | None:intergenic | 30.0% | |
| TAACTGATATCACAACACAA+AGG | - | chr2_1:7805987-7806006 | None:intergenic | 30.0% | |
| GGATTTGAATTTAAACCTAG+AGG | + | chr2_1:7806076-7806095 | Msa0192070:intron | 30.0% | |
| ! | AAACAATGATAATGACCTCT+AGG | - | chr2_1:7806094-7806113 | None:intergenic | 30.0% |
| !! | GACTATTTCTAAGAAACAAG+TGG | - | chr2_1:7806307-7806326 | None:intergenic | 30.0% |
| ATGAAAACCAAATCAGACTT+AGG | + | chr2_1:7806409-7806428 | Msa0192070:intron | 30.0% | |
| ATTCATACCTAAGTCTGATT+TGG | - | chr2_1:7806419-7806438 | None:intergenic | 30.0% | |
| TTGCCATGTATAAACAATAG+GGG | + | chr2_1:7806474-7806493 | Msa0192070:intron | 30.0% | |
| AACAAAGCATATAATCTCCA+TGG | - | chr2_1:7806641-7806660 | None:intergenic | 30.0% | |
| ATGTCAATGAATGCATTTAC+AGG | - | chr2_1:7806691-7806710 | None:intergenic | 30.0% | |
| GTAAATGCATTCATTGACAT+AGG | + | chr2_1:7806691-7806710 | Msa0192070:intron | 30.0% | |
| ! | GTGATAATTAACAGAGTGTT+TGG | - | chr2_1:7806993-7807012 | None:intergenic | 30.0% |
| TCTAATTCTAATGACAAGAG+TGG | - | chr2_1:7807261-7807280 | None:intergenic | 30.0% | |
| ! | AACAAAAACCTTTTTCCACT+AGG | - | chr2_1:7807475-7807494 | None:intergenic | 30.0% |
| CAAAAGAAAGCAGAAATATG+TGG | - | chr2_1:7807524-7807543 | None:intergenic | 30.0% | |
| ATGAACTGAACAAAAGCAAT+TGG | - | chr2_1:7807574-7807593 | None:intergenic | 30.0% | |
| AATAATGAAAAGACATGGTG+TGG | + | chr2_1:7807622-7807641 | Msa0192070:intron | 30.0% | |
| GTCAAACTATACACATGAAT+TGG | - | chr2_1:7807686-7807705 | None:intergenic | 30.0% | |
| !!! | ATATAGGTCTTGCTTTTTTG+AGG | + | chr2_1:7807784-7807803 | Msa0192070:intron | 30.0% |
| ! | TATGCATTTTCTTTACCATC+AGG | - | chr2_1:7807926-7807945 | None:intergenic | 30.0% |
| TCAAATCATTTGTAGCTGTT+TGG | - | chr2_1:7807984-7808003 | None:intergenic | 30.0% | |
| AGGGATAAATTTATTCTCGT+TGG | - | chr2_1:7808042-7808061 | None:intergenic | 30.0% | |
| !! | ATGTAGGCTTTTTCTCATTT+TGG | + | chr2_1:7808103-7808122 | Msa0192070:intron | 30.0% |
| CTAATTACTTACTTCTTGCA+GGG | + | chr2_1:7808535-7808554 | Msa0192070:intron | 30.0% | |
| TAATTACTTACTTCTTGCAG+GGG | + | chr2_1:7808536-7808555 | Msa0192070:intron | 30.0% | |
| AATTGTTACTCATGTACTGA+AGG | + | chr2_1:7808564-7808583 | Msa0192070:CDS | 30.0% | |
| TGCGAAAATATTTAGAGGAA+AGG | + | chr2_1:7808603-7808622 | Msa0192070:CDS | 30.0% | |
| TCCAATTCCTGAAATCTTAA+TGG | - | chr2_1:7808672-7808691 | None:intergenic | 30.0% | |
| !! | TGCTATTTCAAACAATGTGT+AGG | - | chr2_1:7808697-7808716 | None:intergenic | 30.0% |
| AATAAAGTGACACTCATTTC+TGG | + | chr2_1:7808781-7808800 | Msa0192070:intron | 30.0% | |
| ! | TTCCAAACCTTTGAAAACAA+TGG | + | chr2_1:7808835-7808854 | Msa0192070:intron | 30.0% |
| ! | TTCCATTGTTTTCAAAGGTT+TGG | - | chr2_1:7808840-7808859 | None:intergenic | 30.0% |
| ! | TCCAGAGTTTTACCAAAATT+CGG | + | chr2_1:7808914-7808933 | Msa0192070:intron | 30.0% |
| !!! | ATTGTTTCTGTTCCGAATTT+TGG | - | chr2_1:7808929-7808948 | None:intergenic | 30.0% |
| GTTGTATTTATCAAGAGAGT+AGG | - | chr2_1:7808998-7809017 | None:intergenic | 30.0% | |
| ACTCATAATAAAGGGGAAAA+TGG | + | chr2_1:7809188-7809207 | Msa0192070:intron | 30.0% | |
| AATAAAGGGGAAAATGGTAA+AGG | + | chr2_1:7809194-7809213 | Msa0192070:intron | 30.0% | |
| AACTACCAATTACTAAGCTA+TGG | - | chr2_1:7809448-7809467 | None:intergenic | 30.0% | |
| AAACAGCTAAATTCAACTAG+TGG | - | chr2_1:7809537-7809556 | None:intergenic | 30.0% | |
| TAATAATTGCAAGTGTTTGG+AGG | - | chr2_1:7809568-7809587 | None:intergenic | 30.0% | |
| ! | TAGTTATGAATCTTTTGACG+AGG | + | chr2_1:7809613-7809632 | Msa0192070:intron | 30.0% |
| TCAATCCAAAAGATCTTCAT+CGG | + | chr2_1:7809745-7809764 | Msa0192070:CDS | 30.0% | |
| TAGATGATACAGGTATATGT+CGG | + | chr2_1:7809799-7809818 | Msa0192070:intron | 30.0% | |
| ATGGGATATACACCTTATTA+GGG | - | chr2_1:7810107-7810126 | None:intergenic | 30.0% | |
| AATGGGATATACACCTTATT+AGG | - | chr2_1:7810108-7810127 | None:intergenic | 30.0% | |
| TATCAGAATCATATCCAGTA+AGG | - | chr2_1:7810146-7810165 | None:intergenic | 30.0% | |
| TTACTGGATATGATTCTGAT+AGG | + | chr2_1:7810145-7810164 | Msa0192070:CDS | 30.0% | |
| ! | GTTTGGGTTATGATTATCTA+AGG | - | chr2_1:7810480-7810499 | None:intergenic | 30.0% |
| ! | AGTGCTTTTGTAACGAAACT+GGG | - | chr2_1:7804873-7804892 | None:intergenic | 35.0% |
| ! | AAGTGCTTTTGTAACGAAAC+TGG | - | chr2_1:7804874-7804893 | None:intergenic | 35.0% |
| ATTGAAGAAGCCATGAACTT+AGG | - | chr2_1:7804903-7804922 | None:intergenic | 35.0% | |
| AGTAAGTGAGGAATAAACCA+TGG | + | chr2_1:7805178-7805197 | Msa0192070:exon | 35.0% | |
| GTAAGTGAGGAATAAACCAT+GGG | + | chr2_1:7805179-7805198 | Msa0192070:exon | 35.0% | |
| !! | TGTTAGCTAAATTGGTTTGC+AGG | + | chr2_1:7805290-7805309 | Msa0192070:intron | 35.0% |
| !! | AACCTTCTTCTTTCGCTTTT+CGG | - | chr2_1:7805326-7805345 | None:intergenic | 35.0% |
| ! | TGAGAAGAAGTACAAGAGAA+TGG | - | chr2_1:7805689-7805708 | None:intergenic | 35.0% |
| AAGAAACCGTAATGTCAATG+AGG | + | chr2_1:7805773-7805792 | Msa0192070:intron | 35.0% | |
| AGAAACCGTAATGTCAATGA+GGG | + | chr2_1:7805774-7805793 | Msa0192070:intron | 35.0% | |
| TCTGGTTATCCTTCATTGAT+AGG | + | chr2_1:7805857-7805876 | Msa0192070:intron | 35.0% | |
| CATAGACAACCTATCAATGA+AGG | - | chr2_1:7805869-7805888 | None:intergenic | 35.0% | |
| AGATAAGTTTAAGAGGAAGG+GGG | - | chr2_1:7805941-7805960 | None:intergenic | 35.0% | |
| !! | AACACAAAGGAGTACTATAC+AGG | - | chr2_1:7805974-7805993 | None:intergenic | 35.0% |
| ! | TCTAGTACAACTGGATTTTC+AGG | - | chr2_1:7806282-7806301 | None:intergenic | 35.0% |
| AGTCTAACTATTAACAGACC+TGG | + | chr2_1:7806323-7806342 | Msa0192070:intron | 35.0% | |
| !!! | GATTTGGTTTTCATCCGTAA+TGG | - | chr2_1:7806403-7806422 | None:intergenic | 35.0% |
| TGCCATGTATAAACAATAGG+GGG | + | chr2_1:7806475-7806494 | Msa0192070:intron | 35.0% | |
| TGGAAAACTTACTTTGCATC+AGG | - | chr2_1:7806621-7806640 | None:intergenic | 35.0% | |
| ! | GATGCAAAGTAAGTTTTCCA+TGG | + | chr2_1:7806621-7806640 | Msa0192070:intron | 35.0% |
| ACCTCACATAACACATATCA+GGG | - | chr2_1:7806828-7806847 | None:intergenic | 35.0% | |
| AGGGTGATATAACTAATGCT+CGG | + | chr2_1:7807143-7807162 | Msa0192070:CDS | 35.0% | |
| ACATCTGTCAACAGAATTGA+AGG | - | chr2_1:7807199-7807218 | None:intergenic | 35.0% | |
| TCAAATCGTGTTTCGAAATG+GGG | - | chr2_1:7807233-7807252 | None:intergenic | 35.0% | |
| CTCAAATCGTGTTTCGAAAT+GGG | - | chr2_1:7807234-7807253 | None:intergenic | 35.0% | |
| ACTCAAATCGTGTTTCGAAA+TGG | - | chr2_1:7807235-7807254 | None:intergenic | 35.0% | |
| TCTCATGATGAATGAACTTG+AGG | - | chr2_1:7807321-7807340 | None:intergenic | 35.0% | |
| ! | AAAACCTTTTTCCACTAGGT+CGG | - | chr2_1:7807471-7807490 | None:intergenic | 35.0% |
| TTGGCTAGACTTTATAATGC+AGG | - | chr2_1:7807667-7807686 | None:intergenic | 35.0% | |
| ACATCACCAAAGGATCAATT+TGG | - | chr2_1:7807734-7807753 | None:intergenic | 35.0% | |
| ! | TGTTTTCTCTTGTTCTGTTC+AGG | + | chr2_1:7807847-7807866 | Msa0192070:intron | 35.0% |
| ! | CAGGTCATTAGACATTTTGA+TGG | + | chr2_1:7807866-7807885 | Msa0192070:intron | 35.0% |
| !! | TAGACATTTTGATGGTTGCA+AGG | + | chr2_1:7807874-7807893 | Msa0192070:CDS | 35.0% |
| TGACATGGAGCAACAAAAAA+GGG | - | chr2_1:7808061-7808080 | None:intergenic | 35.0% | |
| TTGACATGGAGCAACAAAAA+AGG | - | chr2_1:7808062-7808081 | None:intergenic | 35.0% | |
| !!! | GCTTCATTTTTTGCAGTTAC+CGG | + | chr2_1:7808144-7808163 | Msa0192070:intron | 35.0% |
| !!! | TATTTTTTGCGATCGCCAAA+AGG | - | chr2_1:7808313-7808332 | None:intergenic | 35.0% |
| GCGATCGCAAAAAATATTGA+AGG | + | chr2_1:7808317-7808336 | Msa0192070:intron | 35.0% | |
| GCATATGTCTATTAAAGGTG+AGG | - | chr2_1:7808357-7808376 | None:intergenic | 35.0% | |
| ATGAAACTCTACGCAAATCA+AGG | - | chr2_1:7808471-7808490 | None:intergenic | 35.0% | |
| GCTAATTACTTACTTCTTGC+AGG | + | chr2_1:7808534-7808553 | Msa0192070:intron | 35.0% | |
| CAAATACCTGACAGTATAGA+AGG | - | chr2_1:7808636-7808655 | None:intergenic | 35.0% | |
| GCCATTAAGATTTCAGGAAT+TGG | + | chr2_1:7808668-7808687 | Msa0192070:intron | 35.0% | |
| TTCAAAGTTAGAAGTCGTAG+TGG | - | chr2_1:7808875-7808894 | None:intergenic | 35.0% | |
| !! | TCCGAATTTTGGTAAAACTC+TGG | - | chr2_1:7808918-7808937 | None:intergenic | 35.0% |
| AACAGAAACAATGAGCCAAT+TGG | + | chr2_1:7808937-7808956 | Msa0192070:intron | 35.0% | |
| ! | ACTTGTAGCATGCTTTTGTT+TGG | + | chr2_1:7809079-7809098 | Msa0192070:intron | 35.0% |
| !! | GCTAAAATTGTTTTTCCCTG+TGG | + | chr2_1:7809279-7809298 | Msa0192070:intron | 35.0% |
| !! | CTGGAATTACGACTACTTTT+TGG | - | chr2_1:7809319-7809338 | None:intergenic | 35.0% |
| ACTAAAGTTCTTACCTATGC+TGG | - | chr2_1:7809338-7809357 | None:intergenic | 35.0% | |
| ! | TTATGAATCTTTTGACGAGG+TGG | + | chr2_1:7809616-7809635 | Msa0192070:intron | 35.0% |
| TTTGACGAGGTGGTTTAAAA+TGG | + | chr2_1:7809626-7809645 | Msa0192070:intron | 35.0% | |
| ! | TCTTTTGGATTGAATCCTTC+TGG | - | chr2_1:7809738-7809757 | None:intergenic | 35.0% |
| GCTGAATTCATTTCCATTCA+GGG | - | chr2_1:7809887-7809906 | None:intergenic | 35.0% | |
| AGCTGAATTCATTTCCATTC+AGG | - | chr2_1:7809888-7809907 | None:intergenic | 35.0% | |
| !! | TAATTTTCATGGCCTTGATG+TGG | + | chr2_1:7810030-7810049 | Msa0192070:intron | 35.0% |
| GCATTAATTACTCCACATCA+AGG | - | chr2_1:7810045-7810064 | None:intergenic | 35.0% | |
| AGTTTGCAGATTGTGTTAGT+GGG | + | chr2_1:7810070-7810089 | Msa0192070:intron | 35.0% | |
| !! | TATATCCCATTTCTAGCTTG+CGG | + | chr2_1:7810117-7810136 | Msa0192070:CDS | 35.0% |
| CAAATAACACTACGAATCAG+TGG | - | chr2_1:7810334-7810353 | None:intergenic | 35.0% | |
| !! | CACTGATTCGTAGTGTTATT+TGG | + | chr2_1:7810332-7810351 | Msa0192070:three_prime_UTR | 35.0% |
| ! | ATTTGGGACAACAAAAGACT+CGG | - | chr2_1:7810443-7810462 | None:intergenic | 35.0% |
| ! | ACTTTTGCCTCCTAAGTTCA+TGG | + | chr2_1:7804890-7804909 | Msa0192070:five_prime_UTR | 40.0% |
| CAGACATTTACTCAAACACC+TGG | - | chr2_1:7805088-7805107 | None:intergenic | 40.0% | |
| GTTTCTTAGGCAAGTAAGTG+AGG | + | chr2_1:7805166-7805185 | Msa0192070:intron | 40.0% | |
| CAAAGCTTCAAGGGATAAGA+GGG | + | chr2_1:7805202-7805221 | Msa0192070:CDS | 40.0% | |
| TACCGAAAAGCGAAAGAAGA+AGG | + | chr2_1:7805321-7805340 | Msa0192070:CDS | 40.0% | |
| GAAAAGCGAAAGAAGAAGGT+TGG | + | chr2_1:7805325-7805344 | Msa0192070:CDS | 40.0% | |
| ! | AAAGCGCCATAGTTTGTGTT+TGG | - | chr2_1:7805735-7805754 | None:intergenic | 40.0% |
| GAAACCGTAATGTCAATGAG+GGG | + | chr2_1:7805775-7805794 | Msa0192070:intron | 40.0% | |
| CAATCCCCTCATTGACATTA+CGG | - | chr2_1:7805782-7805801 | None:intergenic | 40.0% | |
| GATAAGTTTAAGAGGAAGGG+GGG | - | chr2_1:7805940-7805959 | None:intergenic | 40.0% | |
| ! | AAATGAAAACTTTGGGGGCT+GGG | - | chr2_1:7806199-7806218 | None:intergenic | 40.0% |
| ! | TAAATGAAAACTTTGGGGGC+TGG | - | chr2_1:7806200-7806219 | None:intergenic | 40.0% |
| TGCCTCACTAATGCAAATGA+AGG | + | chr2_1:7806244-7806263 | Msa0192070:intron | 40.0% | |
| CTCCTTCATTTGCATTAGTG+AGG | - | chr2_1:7806249-7806268 | None:intergenic | 40.0% | |
| CTCACTAATGCAAATGAAGG+AGG | + | chr2_1:7806247-7806266 | Msa0192070:intron | 40.0% | |
| !! | CAAGTGGTTTCTAGTACAAC+TGG | - | chr2_1:7806291-7806310 | None:intergenic | 40.0% |
| GCCATGTATAAACAATAGGG+GGG | + | chr2_1:7806476-7806495 | Msa0192070:intron | 40.0% | |
| TCCCCCCTATTGTTTATACA+TGG | - | chr2_1:7806480-7806499 | None:intergenic | 40.0% | |
| GTTGCAGCTATCTTGATATC+CGG | + | chr2_1:7806530-7806549 | Msa0192070:intron | 40.0% | |
| GATGTGAGATCTCAATGTCA+TGG | - | chr2_1:7806669-7806688 | None:intergenic | 40.0% | |
| TCCCTGATATGTGTTATGTG+AGG | + | chr2_1:7806824-7806843 | Msa0192070:intron | 40.0% | |
| CACCTCACATAACACATATC+AGG | - | chr2_1:7806829-7806848 | None:intergenic | 40.0% | |
| ! | ACAGAGTGTTTGGAATGTGA+AGG | - | chr2_1:7806983-7807002 | None:intergenic | 40.0% |
| TTGCTGCATCATGATATGCA+GGG | + | chr2_1:7807048-7807067 | Msa0192070:intron | 40.0% | |
| !! | AGCTATTGATTTGCAGCCAA+TGG | + | chr2_1:7807093-7807112 | Msa0192070:CDS | 40.0% |
| ACCTGGATAACACCTTCAAT+CGG | - | chr2_1:7807121-7807140 | None:intergenic | 40.0% | |
| CAAATCGTGTTTCGAAATGG+GGG | - | chr2_1:7807232-7807251 | None:intergenic | 40.0% | |
| ! | AAACCTTTTTCCACTAGGTC+GGG | - | chr2_1:7807470-7807489 | None:intergenic | 40.0% |
| ATGTGGTTGAAATTCGACAG+AGG | - | chr2_1:7807507-7807526 | None:intergenic | 40.0% | |
| ! | AAGGATCAATTTGGAGCAAC+AGG | - | chr2_1:7807725-7807744 | None:intergenic | 40.0% |
| GTTGCTCCAAATTGATCCTT+TGG | + | chr2_1:7807725-7807744 | Msa0192070:intron | 40.0% | |
| !!! | ATCCTTTGGTGATGTCGTTT+TGG | + | chr2_1:7807739-7807758 | Msa0192070:intron | 40.0% |
| AACCAAAACGACATCACCAA+AGG | - | chr2_1:7807744-7807763 | None:intergenic | 40.0% | |
| !!! | GTGATGTCGTTTTGGTTTGT+TGG | + | chr2_1:7807747-7807766 | Msa0192070:intron | 40.0% |
| !!! | CGTTTTGGTTTGTTGGAACT+TGG | + | chr2_1:7807754-7807773 | Msa0192070:intron | 40.0% |
| !! | TTGGTTTGTTGGAACTTGGA+AGG | + | chr2_1:7807758-7807777 | Msa0192070:intron | 40.0% |
| GGAACTTGGAAGGATCATAT+AGG | + | chr2_1:7807768-7807787 | Msa0192070:intron | 40.0% | |
| TTACCCTCAACCTCTTTCAT+CGG | + | chr2_1:7808015-7808034 | Msa0192070:intron | 40.0% | |
| TTCATCCATGTCATGAAGTC+CGG | - | chr2_1:7808166-7808185 | None:intergenic | 40.0% | |
| GCTTACTGCAAGTATGAGTT+GGG | - | chr2_1:7808199-7808218 | None:intergenic | 40.0% | |
| TGCTTACTGCAAGTATGAGT+TGG | - | chr2_1:7808200-7808219 | None:intergenic | 40.0% | |
| AGATAAGGTAGTAGACTGAC+TGG | - | chr2_1:7808389-7808408 | None:intergenic | 40.0% | |
| TTAAACTATACACCACGCAC+TGG | - | chr2_1:7808433-7808452 | None:intergenic | 40.0% | |
| GTTACTCATGTACTGAAGGA+AGG | + | chr2_1:7808568-7808587 | Msa0192070:CDS | 40.0% | |
| TCCTGAAATCTTAATGGCGA+GGG | - | chr2_1:7808666-7808685 | None:intergenic | 40.0% | |
| TTCCTGAAATCTTAATGGCG+AGG | - | chr2_1:7808667-7808686 | None:intergenic | 40.0% | |
| !! | GTAGCATGCTTTTGTTTGGT+TGG | + | chr2_1:7809083-7809102 | Msa0192070:intron | 40.0% |
| AGTAGTCGTAATTCCAGCAT+AGG | + | chr2_1:7809322-7809341 | Msa0192070:CDS | 40.0% | |
| ! | ACGAGGTGGTTTAAAATGGT+AGG | + | chr2_1:7809630-7809649 | Msa0192070:intron | 40.0% |
| ! | GGTGGTTTAAAATGGTAGGA+AGG | + | chr2_1:7809634-7809653 | Msa0192070:intron | 40.0% |
| ! | GGTTTAAAATGGTAGGAAGG+CGG | + | chr2_1:7809637-7809656 | Msa0192070:intron | 40.0% |
| ! | GTTTAAAATGGTAGGAAGGC+GGG | + | chr2_1:7809638-7809657 | Msa0192070:intron | 40.0% |
| TTGGATTGAATCCTTCTGGA+GGG | - | chr2_1:7809734-7809753 | None:intergenic | 40.0% | |
| TTTGGATTGAATCCTTCTGG+AGG | - | chr2_1:7809735-7809754 | None:intergenic | 40.0% | |
| ! | AGAAGCCGATGAAGATCTTT+TGG | - | chr2_1:7809753-7809772 | None:intergenic | 40.0% |
| TTCAAAGTTGCATCCCTGAA+TGG | + | chr2_1:7809871-7809890 | Msa0192070:intron | 40.0% | |
| GAGTTTGCAGATTGTGTTAG+TGG | + | chr2_1:7810069-7810088 | Msa0192070:intron | 40.0% | |
| !! | ATATCCCATTTCTAGCTTGC+GGG | + | chr2_1:7810118-7810137 | Msa0192070:CDS | 40.0% |
| !! | ACTCTAGAGCTCTCTTGTAA+GGG | - | chr2_1:7810242-7810261 | None:intergenic | 40.0% |
| !! | AACTCTAGAGCTCTCTTGTA+AGG | - | chr2_1:7810243-7810262 | None:intergenic | 40.0% |
| !!! | GGGAGAGATTTTCAAGTTCT+CGG | - | chr2_1:7810290-7810309 | None:intergenic | 40.0% |
| AGAACTTGAAAATCTCTCCC+TGG | + | chr2_1:7810290-7810309 | Msa0192070:CDS | 40.0% | |
| TATGCAAGATCAGGAATCCA+GGG | - | chr2_1:7810310-7810329 | None:intergenic | 40.0% | |
| ATATGCAAGATCAGGAATCC+AGG | - | chr2_1:7810311-7810330 | None:intergenic | 40.0% | |
| ATCAGTGGATATGCAAGATC+AGG | - | chr2_1:7810319-7810338 | None:intergenic | 40.0% | |
| AAAGACTCGGAAGAAAGGAA+AGG | - | chr2_1:7810430-7810449 | None:intergenic | 40.0% | |
| CAACAAAAGACTCGGAAGAA+AGG | - | chr2_1:7810435-7810454 | None:intergenic | 40.0% | |
| GAAGAAGCCATGAACTTAGG+AGG | - | chr2_1:7804900-7804919 | None:intergenic | 45.0% | |
| AGAATCTCGTACAGTGTACG+AGG | - | chr2_1:7804928-7804947 | None:intergenic | 45.0% | |
| CCTGGAGTGCATATCAACAT+AGG | - | chr2_1:7805070-7805089 | None:intergenic | 45.0% | |
| CCTATGTTGATATGCACTCC+AGG | + | chr2_1:7805067-7805086 | Msa0192070:intron | 45.0% | |
| AAACCATGGGCAAAGCTTCA+AGG | + | chr2_1:7805192-7805211 | Msa0192070:exon | 45.0% | |
| AACCATGGGCAAAGCTTCAA+GGG | + | chr2_1:7805193-7805212 | Msa0192070:exon | 45.0% | |
| GCAAAGCTTCAAGGGATAAG+AGG | + | chr2_1:7805201-7805220 | Msa0192070:CDS | 45.0% | |
| CTTCAAGGGATAAGAGGGTA+TGG | + | chr2_1:7805207-7805226 | Msa0192070:intron | 45.0% | |
| ! | GTAGATTTATGTGCTGCTCC+AGG | + | chr2_1:7805626-7805645 | Msa0192070:CDS | 45.0% |
| CGTAATGTCAATGAGGGGAT+TGG | + | chr2_1:7805780-7805799 | Msa0192070:intron | 45.0% | |
| GGGGAACTAACATTCTGTAC+TGG | - | chr2_1:7806172-7806191 | None:intergenic | 45.0% | |
| ! | AATGAAAACTTTGGGGGCTG+GGG | - | chr2_1:7806198-7806217 | None:intergenic | 45.0% |
| ATGGGTCGTATACTATGACC+AGG | - | chr2_1:7806344-7806363 | None:intergenic | 45.0% | |
| CTGCATATCATGATGCAGCA+AGG | - | chr2_1:7807049-7807068 | None:intergenic | 45.0% | |
| CTTGCTGCATCATGATATGC+AGG | + | chr2_1:7807047-7807066 | Msa0192070:intron | 45.0% | |
| !! | TCCGATTGAAGGTGTTATCC+AGG | + | chr2_1:7807117-7807136 | Msa0192070:CDS | 45.0% |
| TAGTTATATCACCCTGCACC+TGG | - | chr2_1:7807138-7807157 | None:intergenic | 45.0% | |
| ! | AACCTTTTTCCACTAGGTCG+GGG | - | chr2_1:7807469-7807488 | None:intergenic | 45.0% |
| AGTTACCGGACTTCATGACA+TGG | + | chr2_1:7808158-7808177 | Msa0192070:intron | 45.0% | |
| ACTCATGTACTGAAGGAAGG+AGG | + | chr2_1:7808571-7808590 | Msa0192070:CDS | 45.0% | |
| CTCATGTACTGAAGGAAGGA+GGG | + | chr2_1:7808572-7808591 | Msa0192070:CDS | 45.0% | |
| CACAAGCCTTCTATACTGTC+AGG | + | chr2_1:7808627-7808646 | Msa0192070:CDS | 45.0% | |
| CCTGAAATCTTAATGGCGAG+GGG | - | chr2_1:7808665-7808684 | None:intergenic | 45.0% | |
| GCTTTGCAAAAGTCACCACA+GGG | - | chr2_1:7809297-7809316 | None:intergenic | 45.0% | |
| TTAGTTGTTCACCCTTGCAG+AGG | + | chr2_1:7809683-7809702 | Msa0192070:intron | 45.0% | |
| AACTGCAAATGCCTCTGCAA+GGG | - | chr2_1:7809697-7809716 | None:intergenic | 45.0% | |
| AAACTGCAAATGCCTCTGCA+AGG | - | chr2_1:7809698-7809717 | None:intergenic | 45.0% | |
| GAAAATTACTCCCCTCCAGA+AGG | + | chr2_1:7809720-7809739 | Msa0192070:CDS | 45.0% | |
| ! | TGGATTGAATCCTTCTGGAG+GGG | - | chr2_1:7809733-7809752 | None:intergenic | 45.0% |
| !! | TCTTCATCGGCTTCTTGAGA+AGG | + | chr2_1:7809758-7809777 | Msa0192070:CDS | 45.0% |
| AGAAGGTTGGAAGTCCATCA+GGG | + | chr2_1:7809775-7809794 | Msa0192070:CDS | 45.0% | |
| TTGCAGATTGTGTTAGTGGG+TGG | + | chr2_1:7810073-7810092 | Msa0192070:intron | 45.0% | |
| ! | AGATTGTGTTAGTGGGTGGT+TGG | + | chr2_1:7810077-7810096 | Msa0192070:intron | 45.0% |
| !! | TATCCCATTTCTAGCTTGCG+GGG | + | chr2_1:7810119-7810138 | Msa0192070:CDS | 45.0% |
| TATCCACTGCCTAAAGTTGC+TGG | + | chr2_1:7810171-7810190 | Msa0192070:CDS | 45.0% | |
| ATCCACTGCCTAAAGTTGCT+GGG | + | chr2_1:7810172-7810191 | Msa0192070:CDS | 45.0% | |
| TATGTTCCCCCAGCAACTTT+AGG | - | chr2_1:7810183-7810202 | None:intergenic | 45.0% | |
| ! | TCTAGAGCTCTCTTGTAAGG+GGG | - | chr2_1:7810240-7810259 | None:intergenic | 45.0% |
| !! | CTCTAGAGCTCTCTTGTAAG+GGG | - | chr2_1:7810241-7810260 | None:intergenic | 45.0% |
| ATCCCTTGAAGCTTTGCCCA+TGG | - | chr2_1:7805198-7805217 | None:intergenic | 50.0% | |
| ! | ATGAAAACTTTGGGGGCTGG+GGG | - | chr2_1:7806197-7806216 | None:intergenic | 50.0% |
| CTTTGCATCAGGTGCAAGCT+TGG | - | chr2_1:7806610-7806629 | None:intergenic | 50.0% | |
| ACACCTTCAATCGGAGCCAT+TGG | - | chr2_1:7807112-7807131 | None:intergenic | 50.0% | |
| !! | TGAAGGTGTTATCCAGGTGC+AGG | + | chr2_1:7807123-7807142 | Msa0192070:CDS | 50.0% |
| !! | GAAGGTGTTATCCAGGTGCA+GGG | + | chr2_1:7807124-7807143 | Msa0192070:CDS | 50.0% |
| TAATGCTCGGACTGCTGAAG+TGG | + | chr2_1:7807156-7807175 | Msa0192070:CDS | 50.0% | |
| ACCATCGCACACAACAAGGT+CGG | - | chr2_1:7807900-7807919 | None:intergenic | 50.0% | |
| GGTCCGATGAAAGAGGTTGA+GGG | - | chr2_1:7808021-7808040 | None:intergenic | 50.0% | |
| TGGTCCGATGAAAGAGGTTG+AGG | - | chr2_1:7808022-7808041 | None:intergenic | 50.0% | |
| TCTCGTTGGTCCGATGAAAG+AGG | - | chr2_1:7808028-7808047 | None:intergenic | 50.0% | |
| CCCCTCGCCATTAAGATTTC+AGG | + | chr2_1:7808662-7808681 | Msa0192070:intron | 50.0% | |
| ACTCCTACAGGTGCACTTGT+TGG | - | chr2_1:7809028-7809047 | None:intergenic | 50.0% | |
| GGCTTTGCAAAAGTCACCAC+AGG | - | chr2_1:7809298-7809317 | None:intergenic | 50.0% | |
| ! | GCAAGTGTTTGGAGGCACAA+GGG | - | chr2_1:7809560-7809579 | None:intergenic | 50.0% |
| ! | TGCAAGTGTTTGGAGGCACA+AGG | - | chr2_1:7809561-7809580 | None:intergenic | 50.0% |
| !! | CATCGGCTTCTTGAGAAGGT+TGG | + | chr2_1:7809762-7809781 | Msa0192070:CDS | 50.0% |
| GAGAAGGTTGGAAGTCCATC+AGG | + | chr2_1:7809774-7809793 | Msa0192070:CDS | 50.0% | |
| GAAGGTTGGAAGTCCATCAG+GGG | + | chr2_1:7809776-7809795 | Msa0192070:CDS | 50.0% | |
| CCTGTATCATCTACCCCTGA+TGG | - | chr2_1:7809792-7809811 | None:intergenic | 50.0% | |
| CCATCAGGGGTAGATGATAC+AGG | + | chr2_1:7809789-7809808 | Msa0192070:CDS | 50.0% | |
| ! | TGTGTTAGTGGGTGGTTGGA+AGG | + | chr2_1:7810081-7810100 | Msa0192070:CDS | 50.0% |
| GTGGTTGGAAGGCCCTAATA+AGG | + | chr2_1:7810092-7810111 | Msa0192070:CDS | 50.0% | |
| TCCACTGCCTAAAGTTGCTG+GGG | + | chr2_1:7810173-7810192 | Msa0192070:CDS | 50.0% | |
| TGGGGGAACATATCAGAGCT+TGG | + | chr2_1:7810191-7810210 | Msa0192070:CDS | 50.0% | |
| TAGAGCTCTCTTGTAAGGGG+GGG | - | chr2_1:7810238-7810257 | None:intergenic | 50.0% | |
| CTAGAGCTCTCTTGTAAGGG+GGG | - | chr2_1:7810239-7810258 | None:intergenic | 50.0% | |
| CAGCCAATGGCTCCGATTGA+AGG | + | chr2_1:7807106-7807125 | Msa0192070:CDS | 55.0% | |
| ATGTATCCACCCCGACCTAG+TGG | + | chr2_1:7807457-7807476 | Msa0192070:intron | 55.0% | |
| ! | CTTTTTCCACTAGGTCGGGG+TGG | - | chr2_1:7807466-7807485 | None:intergenic | 55.0% |
| CACCCCGACCTAGTGGAAAA+AGG | + | chr2_1:7807464-7807483 | Msa0192070:intron | 55.0% | |
| GAGCACCATCGCACACAACA+AGG | - | chr2_1:7807904-7807923 | None:intergenic | 55.0% | |
| GCACCAACAAGTGCACCTGT+AGG | + | chr2_1:7809022-7809041 | Msa0192070:intron | 55.0% | |
| GGTCCCCGCAAGCTAGAAAT+GGG | - | chr2_1:7810125-7810144 | None:intergenic | 55.0% | |
| AGGTCCCCGCAAGCTAGAAA+TGG | - | chr2_1:7810126-7810145 | None:intergenic | 55.0% | |
| CCACTGCCTAAAGTTGCTGG+GGG | + | chr2_1:7810174-7810193 | Msa0192070:CDS | 55.0% | |
| GGGGCAATAGGAGGTTGTAC+TGG | - | chr2_1:7810219-7810238 | None:intergenic | 55.0% | |
| TTGTAAGGGGGGGCAATAGG+AGG | - | chr2_1:7810228-7810247 | None:intergenic | 55.0% | |
| CTCTTGTAAGGGGGGGCAAT+AGG | - | chr2_1:7810231-7810250 | None:intergenic | 55.0% | |
| ! | TATGTGCTGCTCCAGGCAGC+TGG | + | chr2_1:7805633-7805652 | Msa0192070:CDS | 60.0% |
| AGTACCTGACTCCAGCTGCC+TGG | - | chr2_1:7805647-7805666 | None:intergenic | 60.0% | |
| AGGCAGCTGGAGTCAGGTAC+TGG | + | chr2_1:7805646-7805665 | Msa0192070:intron | 60.0% | |
| ! | AACTTTGGGGGCTGGGGGTA+GGG | - | chr2_1:7806192-7806211 | None:intergenic | 60.0% |
| ! | AAACTTTGGGGGCTGGGGGT+AGG | - | chr2_1:7806193-7806212 | None:intergenic | 60.0% |
| CAGGTGCAAGCTTGGCTGGA+AGG | - | chr2_1:7806602-7806621 | None:intergenic | 60.0% | |
| GCATCAGGTGCAAGCTTGGC+TGG | - | chr2_1:7806606-7806625 | None:intergenic | 60.0% | |
| ! | GCCGACCTTGTTGTGTGCGA+TGG | + | chr2_1:7807896-7807915 | Msa0192070:CDS | 60.0% |
| GTGTGCGATGGTGCTCCTGA+TGG | + | chr2_1:7807908-7807927 | Msa0192070:CDS | 60.0% | |
| AATGCGCACACACCAGTGCG+TGG | + | chr2_1:7808418-7808437 | Msa0192070:intron | 60.0% | |
| ! | CTAGCTTGCGGGGACCTTAC+TGG | + | chr2_1:7810129-7810148 | Msa0192070:CDS | 60.0% |
| CCCCCAGCAACTTTAGGCAG+TGG | - | chr2_1:7810177-7810196 | None:intergenic | 60.0% | |
| TGCTCCAGGCAGCTGGAGTC+AGG | + | chr2_1:7805640-7805659 | Msa0192070:CDS | 65.0% | |
| ! | ACTTTGGGGGCTGGGGGTAG+GGG | - | chr2_1:7806191-7806210 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 7804845 | 7810596 | 7804845 | ID=Msa0192070;Name=Msa0192070 |
| chr2_1 | mRNA | 7804845 | 7810596 | 7804845 | ID=Msa0192070-mRNA-1;Parent=Msa0192070;Name=Msa0192070-mRNA-1;_AED=0.04;_eAED=0.04;_QI=229|1|1|1|0.90|0.83|12|276|316 |
| chr2_1 | exon | 7804845 | 7805051 | 7804845 | ID=Msa0192070-mRNA-1:exon:3603;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7805175 | 7805223 | 7805175 | ID=Msa0192070-mRNA-1:exon:3604;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7805312 | 7805405 | 7805312 | ID=Msa0192070-mRNA-1:exon:3605;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7805612 | 7805661 | 7805612 | ID=Msa0192070-mRNA-1:exon:3606;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7806579 | 7806628 | 7806579 | ID=Msa0192070-mRNA-1:exon:3607;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7807069 | 7807177 | 7807069 | ID=Msa0192070-mRNA-1:exon:3608;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7807869 | 7807929 | 7807869 | ID=Msa0192070-mRNA-1:exon:3609;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7808160 | 7808212 | 7808160 | ID=Msa0192070-mRNA-1:exon:3610;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7808556 | 7808648 | 7808556 | ID=Msa0192070-mRNA-1:exon:3611;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7809280 | 7809343 | 7809280 | ID=Msa0192070-mRNA-1:exon:3612;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7809703 | 7809810 | 7809703 | ID=Msa0192070-mRNA-1:exon:3613;Parent=Msa0192070-mRNA-1 |
| chr2_1 | exon | 7810079 | 7810596 | 7810079 | ID=Msa0192070-mRNA-1:exon:3614;Parent=Msa0192070-mRNA-1 |
| chr2_1 | five_prime_UTR | 7804845 | 7805051 | 7804845 | ID=Msa0192070-mRNA-1:five_prime_utr;Parent=Msa0192070-mRNA-1 |
| chr2_1 | five_prime_UTR | 7805175 | 7805196 | 7805175 | ID=Msa0192070-mRNA-1:five_prime_utr;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7805197 | 7805223 | 7805197 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7805312 | 7805405 | 7805312 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7805612 | 7805661 | 7805612 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7806579 | 7806628 | 7806579 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7807069 | 7807177 | 7807069 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7807869 | 7807929 | 7807869 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7808160 | 7808212 | 7808160 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7808556 | 7808648 | 7808556 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7809280 | 7809343 | 7809280 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7809703 | 7809810 | 7809703 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | CDS | 7810079 | 7810320 | 7810079 | ID=Msa0192070-mRNA-1:cds;Parent=Msa0192070-mRNA-1 |
| chr2_1 | three_prime_UTR | 7810321 | 7810596 | 7810321 | ID=Msa0192070-mRNA-1:three_prime_utr;Parent=Msa0192070-mRNA-1 |
| Gene Sequence |
| Protein sequence |
