Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193130 | AES63937.1 | 94.748 | 457 | 10 | 1 | 1 | 443 | 1 | 457 | 0.0 | 886 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193130 | sp|Q6X7J5|WOX8_ARATH | 36.538 | 416 | 161 | 11 | 1 | 405 | 1 | 324 | 4.77e-72 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193130 | G7IFI6 | 94.748 | 457 | 10 | 1 | 1 | 443 | 1 | 457 | 0.0 | 886 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0193130 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0193130 | Msa0234360 | 0.878033 | 3.895208e-69 | -8.615850e-47 |
| Msa0193130 | Msa0273150 | 0.919151 | 6.441904e-87 | -8.615850e-47 |
| Msa0193130 | Msa0308940 | 0.889727 | 1.869109e-73 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193130 | MtrunA17_Chr2g0283141 | 94.748 | 457 | 10 | 1 | 1 | 443 | 1 | 457 | 0.0 | 886 |
| Msa0193130 | MtrunA17_Chr7g0223471 | 45.455 | 440 | 173 | 18 | 1 | 407 | 1 | 406 | 3.03e-89 | 277 |
| Msa0193130 | MtrunA17_Chr4g0046231 | 37.079 | 356 | 169 | 13 | 74 | 405 | 1 | 325 | 4.05e-43 | 154 |
| Msa0193130 | MtrunA17_Chr6g0460691 | 66.667 | 60 | 20 | 0 | 47 | 106 | 24 | 83 | 7.79e-23 | 98.2 |
| Msa0193130 | MtrunA17_Chr7g0254251 | 59.341 | 91 | 36 | 1 | 39 | 129 | 13 | 102 | 3.17e-22 | 95.9 |
| Msa0193130 | MtrunA17_Chr7g0254251 | 43.056 | 72 | 41 | 0 | 341 | 412 | 201 | 272 | 1.02e-13 | 71.2 |
| Msa0193130 | MtrunA17_Chr4g0046251 | 59.375 | 64 | 26 | 0 | 342 | 405 | 21 | 84 | 5.81e-17 | 75.9 |
| Msa0193130 | MtrunA17_Chr4g0043891 | 37.805 | 82 | 51 | 0 | 50 | 131 | 3 | 84 | 8.12e-17 | 79.7 |
| Msa0193130 | MtrunA17_Chr8g0392991 | 35.238 | 105 | 68 | 0 | 55 | 159 | 96 | 200 | 1.55e-15 | 77.8 |
| Msa0193130 | MtrunA17_Chr1g0212511 | 43.939 | 66 | 37 | 0 | 52 | 117 | 82 | 147 | 3.88e-15 | 75.1 |
| Msa0193130 | MtrunA17_Chr5g0436661 | 45.312 | 64 | 35 | 0 | 55 | 118 | 33 | 96 | 5.73e-15 | 73.2 |
| Msa0193130 | MtrunA17_Chr3g0144021 | 37.363 | 91 | 56 | 1 | 24 | 114 | 52 | 141 | 6.15e-15 | 73.6 |
| Msa0193130 | MtrunA17_Chr7g0238431 | 43.836 | 73 | 41 | 0 | 49 | 121 | 2 | 74 | 1.84e-14 | 72.0 |
| Msa0193130 | MtrunA17_Chr5g0405351 | 42.667 | 75 | 42 | 1 | 49 | 122 | 24 | 98 | 4.15e-14 | 72.8 |
| Msa0193130 | MtrunA17_Chr4g0031341 | 48.387 | 62 | 32 | 0 | 55 | 116 | 25 | 86 | 6.46e-14 | 71.6 |
| Msa0193130 | MtrunA17_Chr1g0153171 | 50.000 | 60 | 30 | 0 | 55 | 114 | 90 | 149 | 1.07e-13 | 70.5 |
| Msa0193130 | MtrunA17_Chr7g0222981 | 42.424 | 66 | 38 | 0 | 49 | 114 | 62 | 127 | 1.46e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0193130 | AT5G45980.1 | 36.538 | 416 | 161 | 11 | 1 | 405 | 1 | 324 | 4.85e-73 | 233 |
| Msa0193130 | AT2G33880.1 | 85.714 | 126 | 14 | 3 | 1 | 124 | 1 | 124 | 5.49e-68 | 221 |
| Msa0193130 | AT2G33880.2 | 85.714 | 126 | 14 | 3 | 1 | 124 | 1 | 124 | 7.61e-68 | 221 |
| Msa0193130 | AT3G03660.1 | 64.286 | 70 | 24 | 1 | 38 | 106 | 15 | 84 | 1.80e-23 | 99.8 |
| Msa0193130 | AT3G03660.1 | 51.786 | 56 | 27 | 0 | 350 | 405 | 208 | 263 | 2.37e-12 | 67.4 |
| Msa0193130 | AT3G03660.2 | 64.286 | 70 | 24 | 1 | 38 | 106 | 15 | 84 | 3.33e-23 | 99.8 |
| Msa0193130 | AT3G03660.2 | 51.786 | 56 | 27 | 0 | 350 | 405 | 237 | 292 | 3.87e-12 | 67.4 |
| Msa0193130 | AT3G03660.4 | 64.286 | 70 | 24 | 1 | 38 | 106 | 15 | 84 | 4.97e-23 | 99.0 |
| Msa0193130 | AT3G03660.4 | 45.588 | 68 | 37 | 0 | 351 | 418 | 209 | 276 | 2.51e-12 | 67.8 |
| Msa0193130 | AT3G03660.3 | 64.286 | 70 | 24 | 1 | 38 | 106 | 15 | 84 | 7.53e-23 | 99.4 |
| Msa0193130 | AT3G03660.3 | 45.588 | 68 | 37 | 0 | 351 | 418 | 238 | 305 | 3.29e-12 | 67.8 |
| Msa0193130 | AT5G17810.3 | 67.797 | 59 | 18 | 1 | 49 | 106 | 14 | 72 | 4.84e-21 | 92.8 |
| Msa0193130 | AT5G17810.3 | 50.000 | 56 | 28 | 0 | 350 | 405 | 207 | 262 | 1.13e-12 | 68.6 |
| Msa0193130 | AT5G17810.1 | 67.797 | 59 | 18 | 1 | 49 | 106 | 14 | 72 | 5.22e-21 | 92.8 |
| Msa0193130 | AT5G17810.1 | 50.000 | 56 | 28 | 0 | 350 | 405 | 208 | 263 | 1.09e-12 | 68.6 |
| Msa0193130 | AT5G17810.2 | 67.797 | 59 | 18 | 1 | 49 | 106 | 14 | 72 | 5.22e-21 | 92.8 |
| Msa0193130 | AT5G17810.2 | 50.000 | 56 | 28 | 0 | 350 | 405 | 208 | 263 | 1.09e-12 | 68.6 |
| Msa0193130 | AT5G05770.1 | 34.066 | 91 | 60 | 0 | 55 | 145 | 29 | 119 | 8.74e-16 | 73.9 |
| Msa0193130 | AT3G18010.1 | 48.387 | 62 | 32 | 0 | 55 | 116 | 76 | 137 | 7.89e-15 | 75.9 |
| Msa0193130 | AT1G20700.2 | 48.333 | 60 | 31 | 0 | 55 | 114 | 33 | 92 | 1.34e-14 | 71.2 |
| Msa0193130 | AT2G28610.1 | 48.529 | 68 | 35 | 0 | 49 | 116 | 2 | 69 | 1.35e-14 | 73.6 |
| Msa0193130 | AT3G11260.1 | 45.312 | 64 | 35 | 0 | 55 | 118 | 24 | 87 | 1.82e-14 | 72.0 |
| Msa0193130 | AT1G20700.1 | 46.774 | 62 | 33 | 0 | 53 | 114 | 93 | 154 | 2.68e-14 | 72.0 |
| Msa0193130 | AT1G20700.3 | 46.774 | 62 | 33 | 0 | 53 | 114 | 93 | 154 | 2.92e-14 | 72.0 |
| Msa0193130 | AT1G46480.2 | 50.000 | 60 | 30 | 0 | 55 | 114 | 90 | 149 | 4.49e-14 | 70.9 |
| Msa0193130 | AT4G35550.1 | 45.161 | 62 | 34 | 0 | 53 | 114 | 97 | 158 | 1.20e-13 | 71.2 |
| Msa0193130 | AT1G46480.1 | 50.000 | 60 | 30 | 0 | 55 | 114 | 90 | 149 | 2.40e-13 | 70.1 |
| Msa0193130 | AT2G01500.1 | 50.909 | 55 | 27 | 0 | 55 | 109 | 61 | 115 | 7.19e-13 | 68.9 |
| Msa0193130 | AT5G46010.1 | 47.619 | 63 | 32 | 1 | 51 | 112 | 50 | 112 | 1.46e-12 | 64.7 |
| Msa0193130 | AT5G59340.1 | 43.333 | 60 | 34 | 0 | 55 | 114 | 14 | 73 | 1.74e-12 | 67.8 |
| Msa0193130 | AT2G17950.1 | 46.032 | 63 | 33 | 1 | 55 | 116 | 38 | 100 | 2.93e-12 | 67.4 |
Find 104 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGATTCTGATTCTGATTC+TGG | 0.081403 | 2_1:+8952623 | None:intergenic |
| GAAATTTGAGGAAGTGAATT+AGG | 0.138466 | 2_1:+8952580 | None:intergenic |
| TGCTTCTTGATTTGCGGTTT+TGG | 0.159712 | 2_1:+8952689 | None:intergenic |
| TCTGATTCTTGTTCTGGTTT+TGG | 0.210118 | 2_1:+8952647 | None:intergenic |
| GTGGCCTTTGAGGTTGCTTC+TGG | 0.210381 | 2_1:-8951339 | Msa0193130:CDS |
| TCTGGTTCTGATTCTTGTTC+TGG | 0.215529 | 2_1:+8952641 | None:intergenic |
| ATTTATCATCATCATAATTA+TGG | 0.218372 | 2_1:-8953173 | Msa0193130:exon |
| CTTGAAGCTATCTTCAATTC+TGG | 0.223036 | 2_1:-8952805 | Msa0193130:CDS |
| TTTAATGTTCGTGCGGCATT+TGG | 0.234206 | 2_1:-8951312 | Msa0193130:CDS |
| ATGCGGATTTGTTCTGGTTT+TGG | 0.247339 | 2_1:+8952829 | None:intergenic |
| TTGGCAGGTATTAATTCTTT+TGG | 0.251759 | 2_1:+8952511 | None:intergenic |
| TTAATGTTCGTGCGGCATTT+GGG | 0.270781 | 2_1:-8951311 | Msa0193130:CDS |
| ATCTGTGCTGTTCTAAAGTA+TGG | 0.274072 | 2_1:-8950901 | Msa0193130:CDS |
| CCTTGTGATGTAACATTGTT+AGG | 0.298506 | 2_1:+8952298 | None:intergenic |
| TTTGGATTCCACCTTGGCTT+TGG | 0.309423 | 2_1:+8952847 | None:intergenic |
| CCATTGGTGATGAGTGTTGC+AGG | 0.323664 | 2_1:+8953108 | None:intergenic |
| TCAAGTATGCGGATTTGTTC+TGG | 0.334510 | 2_1:+8952823 | None:intergenic |
| AATGCCGCACGAACATTAAA+AGG | 0.340006 | 2_1:+8951315 | None:intergenic |
| GGCACAACATCATTGATGTT+AGG | 0.346091 | 2_1:+8952469 | None:intergenic |
| GCTGAAAATATGTTTGGTTT+TGG | 0.348978 | 2_1:+8952422 | None:intergenic |
| ATCTTCCTTATCTCTTCTCT+TGG | 0.351542 | 2_1:+8952769 | None:intergenic |
| CTGTTCTTGATCTTTCTTTG+AGG | 0.356529 | 2_1:+8952150 | None:intergenic |
| ACAGAAGCAGTTGGAGAATT+AGG | 0.358074 | 2_1:+8952448 | None:intergenic |
| TTTGAGGCTGAAAATATGTT+TGG | 0.371353 | 2_1:+8952416 | None:intergenic |
| TTCCACCTTGGCTTTGGCTC+AGG | 0.373630 | 2_1:+8952853 | None:intergenic |
| TTCCTTATCTCTTCTCTTGG+TGG | 0.377528 | 2_1:+8952772 | None:intergenic |
| AAATTTGAGGAAGTGAATTA+GGG | 0.386654 | 2_1:+8952581 | None:intergenic |
| CCTTGCACTTGAGAAATGAT+AGG | 0.417012 | 2_1:+8952007 | None:intergenic |
| GTAGGATGTAAAACAGTAGT+AGG | 0.421080 | 2_1:+8952058 | None:intergenic |
| CCAGAATCAGAATCAGAATC+AGG | 0.428113 | 2_1:-8952623 | Msa0193130:CDS |
| TATGCTTGCTTCTTGATTTG+CGG | 0.428894 | 2_1:+8952683 | None:intergenic |
| GCACAACATCATTGATGTTA+GGG | 0.443675 | 2_1:+8952470 | None:intergenic |
| TATCAATGATGTGGCCTTTG+AGG | 0.444367 | 2_1:-8951349 | Msa0193130:CDS |
| TTAGGGTTATTATTCAATAG+AGG | 0.446319 | 2_1:-8950962 | Msa0193130:intron |
| AGAGCACAGTTGCAAGAGTA+TGG | 0.448490 | 2_1:-8952745 | Msa0193130:CDS |
| TAGTGCAGTTACCAGTGTTA+TGG | 0.449318 | 2_1:+8952218 | None:intergenic |
| GGCTTAGACTTAAACATGCT+TGG | 0.459758 | 2_1:+8953130 | None:intergenic |
| TTACTTGTGGTGGTGGAAGA+AGG | 0.462598 | 2_1:+8952383 | None:intergenic |
| TTCTTCCCAGTGCAACATCA+TGG | 0.463536 | 2_1:-8952337 | Msa0193130:CDS |
| CTCAAAGAAAGATCAAGAAC+AGG | 0.467360 | 2_1:-8952149 | Msa0193130:CDS |
| AGATAATTACCTGAGGAGTA+AGG | 0.470017 | 2_1:+8953037 | None:intergenic |
| ATCTCAGGCATTGGTGAACC+AGG | 0.475607 | 2_1:-8951396 | Msa0193130:intron |
| GCTGTTCTTGTACATCAAAC+TGG | 0.484452 | 2_1:-8951282 | Msa0193130:CDS |
| GAAAATAACATGCACCATGC+TGG | 0.488247 | 2_1:+8951214 | None:intergenic |
| CCTAACAATGTTACATCACA+AGG | 0.488908 | 2_1:-8952298 | Msa0193130:CDS |
| CCAAGGGAAAATACTTTGGC+AGG | 0.496441 | 2_1:+8952496 | None:intergenic |
| CCTTGTCCATGATGTTGCAC+TGG | 0.500743 | 2_1:+8952331 | None:intergenic |
| TGCTGACCATGTGGTTGAGC+AGG | 0.506086 | 2_1:+8952244 | None:intergenic |
| GAAACCAAGGGAAAATACTT+TGG | 0.514758 | 2_1:+8952492 | None:intergenic |
| GATAATTACCTGAGGAGTAA+GGG | 0.515469 | 2_1:+8953038 | None:intergenic |
| CACAGAACCCCTTACTCCTC+AGG | 0.516334 | 2_1:-8953046 | Msa0193130:intron |
| AGTGAAGAGTGACACCATAC+TGG | 0.516391 | 2_1:+8951241 | None:intergenic |
| TGTTCATGATCTCACTAAGC+AGG | 0.516785 | 2_1:+8952188 | None:intergenic |
| GTGATGGTGGAGGAAGTAGT+AGG | 0.517817 | 2_1:+8952040 | None:intergenic |
| GGTGAAGAGGCTATATAAGA+AGG | 0.523036 | 2_1:-8953300 | None:intergenic |
| TAATGTTCGTGCGGCATTTG+GGG | 0.529446 | 2_1:-8951310 | Msa0193130:CDS |
| AAGAAGAAAGTCTCAGTAGC+TGG | 0.533457 | 2_1:+8952355 | None:intergenic |
| GGTACAGTAGCAGAAATTTG+AGG | 0.535619 | 2_1:+8952568 | None:intergenic |
| GGTGCAGTTACTTGTGGTGG+TGG | 0.536505 | 2_1:+8952376 | None:intergenic |
| ATCCACCAAGAGAAGAGATA+AGG | 0.537259 | 2_1:-8952774 | Msa0193130:CDS |
| TTGCAAGAGTATGGTCAAGT+TGG | 0.545746 | 2_1:-8952736 | Msa0193130:CDS |
| TACTTGTGGTGGTGGAAGAA+GGG | 0.555078 | 2_1:+8952384 | None:intergenic |
| AGCTATCTTCAATTCTGGAA+TGG | 0.556620 | 2_1:-8952800 | Msa0193130:CDS |
| GCAAACAGATGTTCAGATGT+GGG | 0.556845 | 2_1:+8952095 | None:intergenic |
| GAGGAAGATGAAGAAGATGA+AGG | 0.560821 | 2_1:+8952547 | None:intergenic |
| CCTGTGTTAACAAACCAGTA+TGG | 0.574262 | 2_1:-8951255 | Msa0193130:CDS |
| AGGTGATTGAACAGTGATGG+TGG | 0.575194 | 2_1:+8952027 | None:intergenic |
| GGCAAACAGATGTTCAGATG+TGG | 0.578783 | 2_1:+8952094 | None:intergenic |
| AACAGTAGTAGGAGTTGTGG+CGG | 0.580421 | 2_1:+8952069 | None:intergenic |
| CTTGTCCATGATGTTGCACT+GGG | 0.582831 | 2_1:+8952332 | None:intergenic |
| CATTGATGTTAGGGAAACCA+AGG | 0.582855 | 2_1:+8952479 | None:intergenic |
| ACTCTTCACTCACTCCAGCA+TGG | 0.587267 | 2_1:-8951228 | Msa0193130:CDS |
| CATTGGTGATGAGTGTTGCA+GGG | 0.588949 | 2_1:+8953109 | None:intergenic |
| GTAGCTGGTGCAGTTACTTG+TGG | 0.590783 | 2_1:+8952370 | None:intergenic |
| AGTTGATGTCATGCTGCCAT+TGG | 0.593818 | 2_1:+8953092 | None:intergenic |
| GAAGTCCTGAGCCAAAGCCA+AGG | 0.598879 | 2_1:-8952858 | Msa0193130:CDS |
| AAACAGATGTTCAGATGTGG+GGG | 0.599793 | 2_1:+8952097 | None:intergenic |
| CCTATCATTTCTCAAGTGCA+AGG | 0.604894 | 2_1:-8952007 | Msa0193130:intron |
| TGAAGATAGCTTCAAGTATG+CGG | 0.609197 | 2_1:+8952812 | None:intergenic |
| ATAATTACCTGAGGAGTAAG+GGG | 0.610710 | 2_1:+8953039 | None:intergenic |
| CAAACAGATGTTCAGATGTG+GGG | 0.614296 | 2_1:+8952096 | None:intergenic |
| TAAAACAGTAGTAGGAGTTG+TGG | 0.614312 | 2_1:+8952066 | None:intergenic |
| CCATACTGGTTTGTTAACAC+AGG | 0.617631 | 2_1:+8951255 | None:intergenic |
| GCTGGTGCAGTTACTTGTGG+TGG | 0.617972 | 2_1:+8952373 | None:intergenic |
| AGGTCCAGAAGCAACCTCAA+AGG | 0.623758 | 2_1:+8951335 | None:intergenic |
| GTAGTAGGAGTTGTGGCGGG+TGG | 0.627094 | 2_1:+8952073 | None:intergenic |
| ATGGTTCCTGCTCAACCACA+TGG | 0.630924 | 2_1:-8952250 | Msa0193130:CDS |
| TGGCTTCATCAAATAGACAC+TGG | 0.631121 | 2_1:-8953153 | Msa0193130:CDS |
| CCAGTGCAACATCATGGACA+AGG | 0.635853 | 2_1:-8952331 | Msa0193130:CDS |
| GATAGGTGATTGAACAGTGA+TGG | 0.637240 | 2_1:+8952024 | None:intergenic |
| ACAGTAGTAGGAGTTGTGGC+GGG | 0.646909 | 2_1:+8952070 | None:intergenic |
| GTCCTGAGCCAAAGCCAAGG+TGG | 0.648407 | 2_1:-8952855 | Msa0193130:CDS |
| CCTGCAACACTCATCACCAA+TGG | 0.655110 | 2_1:-8953108 | Msa0193130:CDS |
| ATTGATGTTAGGGAAACCAA+GGG | 0.665295 | 2_1:+8952480 | None:intergenic |
| CTAACAATGTTACATCACAA+GGG | 0.668058 | 2_1:-8952297 | Msa0193130:CDS |
| GGTCAGCAACACCATAACAC+TGG | 0.670176 | 2_1:-8952229 | Msa0193130:CDS |
| TTATGGTGTTGCTGACCATG+TGG | 0.673188 | 2_1:+8952235 | None:intergenic |
| AGTGAGATCATGAACAACCA+TGG | 0.690840 | 2_1:-8952181 | Msa0193130:CDS |
| TGGTTGAGCAGGAACCATGT+TGG | 0.698137 | 2_1:+8952255 | None:intergenic |
| TCTTTGAGGAATTAACACCA+TGG | 0.698293 | 2_1:+8952164 | None:intergenic |
| AGTGGTGTTTATCAATGATG+TGG | 0.701398 | 2_1:-8951358 | Msa0193130:CDS |
| TGATTGAACAGTGATGGTGG+AGG | 0.713068 | 2_1:+8952030 | None:intergenic |
| AACAGATGTTCAGATGTGGG+GGG | 0.713218 | 2_1:+8952098 | None:intergenic |
| AGGTGTTGCTGCAAAATCAG+TGG | 0.717993 | 2_1:-8951376 | Msa0193130:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGAAACTAAATAATTT+GGG | + | chr2_1:8952266-8952285 | None:intergenic | 10.0% |
| !! | TTAAAGAAACTAAATAATTT+GGG | + | chr2_1:8952266-8952285 | None:intergenic | 10.0% |
| !! | ATTTATCATCATCATAATTA+TGG | - | chr2_1:8950982-8951001 | Msa0193130:intron | 15.0% |
| !! | TAAAGAAACTAAATAATTTG+GGG | + | chr2_1:8952265-8952284 | None:intergenic | 15.0% |
| !! | GTTAAAGAAACTAAATAATT+TGG | + | chr2_1:8952267-8952286 | None:intergenic | 15.0% |
| !! | AAGTATATAGATGAAATAAT+AGG | + | chr2_1:8952490-8952509 | None:intergenic | 15.0% |
| !! | TATGAAAAATAAATTAGAGA+AGG | + | chr2_1:8953027-8953046 | None:intergenic | 15.0% |
| !! | ATTTATCATCATCATAATTA+TGG | - | chr2_1:8950982-8951001 | Msa0193130:intron | 15.0% |
| !! | TAAAGAAACTAAATAATTTG+GGG | + | chr2_1:8952265-8952284 | None:intergenic | 15.0% |
| !! | GTTAAAGAAACTAAATAATT+TGG | + | chr2_1:8952267-8952286 | None:intergenic | 15.0% |
| !! | AAGTATATAGATGAAATAAT+AGG | + | chr2_1:8952490-8952509 | None:intergenic | 15.0% |
| !! | TATGAAAAATAAATTAGAGA+AGG | + | chr2_1:8953027-8953046 | None:intergenic | 15.0% |
| !! | TTGTTACAAATTAGACATTA+GGG | + | chr2_1:8951224-8951243 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTCTTCTTCTTTG+TGG | - | chr2_1:8951256-8951275 | Msa0193130:CDS | 20.0% |
| !! | AATTTAGAGATGAAAATATG+TGG | + | chr2_1:8952299-8952318 | None:intergenic | 20.0% |
| !!! | CATAGTTTTTGAGATAAAAA+TGG | - | chr2_1:8952542-8952561 | Msa0193130:CDS | 20.0% |
| !!! | TAAAAATGGTAATGTATGTA+TGG | - | chr2_1:8952556-8952575 | Msa0193130:CDS | 20.0% |
| !!! | TTTAGTATTAGTTTGACTTT+TGG | - | chr2_1:8952683-8952702 | Msa0193130:CDS | 20.0% |
| !!! | TTAATGTATGGTGTTTTATT+TGG | - | chr2_1:8953097-8953116 | Msa0193130:CDS | 20.0% |
| !! | TTGTTACAAATTAGACATTA+GGG | + | chr2_1:8951224-8951243 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTCTTCTTCTTTG+TGG | - | chr2_1:8951256-8951275 | Msa0193130:CDS | 20.0% |
| !! | AATTTAGAGATGAAAATATG+TGG | + | chr2_1:8952299-8952318 | None:intergenic | 20.0% |
| !!! | CATAGTTTTTGAGATAAAAA+TGG | - | chr2_1:8952542-8952561 | Msa0193130:CDS | 20.0% |
| !!! | TAAAAATGGTAATGTATGTA+TGG | - | chr2_1:8952556-8952575 | Msa0193130:CDS | 20.0% |
| !!! | TTTAGTATTAGTTTGACTTT+TGG | - | chr2_1:8952683-8952702 | Msa0193130:CDS | 20.0% |
| !!! | TTAATGTATGGTGTTTTATT+TGG | - | chr2_1:8953097-8953116 | Msa0193130:CDS | 20.0% |
| ! | AAAATGTAGATAATTACCTG+AGG | + | chr2_1:8951128-8951147 | None:intergenic | 25.0% |
| ! | CTTGTTACAAATTAGACATT+AGG | + | chr2_1:8951225-8951244 | None:intergenic | 25.0% |
| ! | AAATTTGAGGAAGTGAATTA+GGG | + | chr2_1:8951577-8951596 | None:intergenic | 25.0% |
| ! | ATCTCAAAAACTATGTTCTT+AGG | + | chr2_1:8952537-8952556 | None:intergenic | 25.0% |
| !!! | ATATTTTGTTTTGCAGATGT+AGG | - | chr2_1:8953046-8953065 | Msa0193130:intron | 25.0% |
| !!! | TATTTTGTTTTGCAGATGTA+GGG | - | chr2_1:8953047-8953066 | Msa0193130:CDS | 25.0% |
| !!! | TACTATTGTGTTTGCTATTA+GGG | - | chr2_1:8953176-8953195 | Msa0193130:exon | 25.0% |
| ! | TTAGGGTTATTATTCAATAG+AGG | - | chr2_1:8953193-8953212 | Msa0193130:five_prime_UTR | 25.0% |
| ! | AAAATGTAGATAATTACCTG+AGG | + | chr2_1:8951128-8951147 | None:intergenic | 25.0% |
| ! | CTTGTTACAAATTAGACATT+AGG | + | chr2_1:8951225-8951244 | None:intergenic | 25.0% |
| ! | AAATTTGAGGAAGTGAATTA+GGG | + | chr2_1:8951577-8951596 | None:intergenic | 25.0% |
| ! | ATCTCAAAAACTATGTTCTT+AGG | + | chr2_1:8952537-8952556 | None:intergenic | 25.0% |
| !!! | ATATTTTGTTTTGCAGATGT+AGG | - | chr2_1:8953046-8953065 | Msa0193130:intron | 25.0% |
| !!! | TATTTTGTTTTGCAGATGTA+GGG | - | chr2_1:8953047-8953066 | Msa0193130:CDS | 25.0% |
| !!! | TACTATTGTGTTTGCTATTA+GGG | - | chr2_1:8953176-8953195 | Msa0193130:exon | 25.0% |
| ! | TTAGGGTTATTATTCAATAG+AGG | - | chr2_1:8953193-8953212 | Msa0193130:five_prime_UTR | 25.0% |
| !! | GCTATATAAGAAGGTTTTGT+TGG | - | chr2_1:8950864-8950883 | Msa0193130:CDS | 30.0% |
| TTCTTCTTCTTTGTGGAAAT+AGG | - | chr2_1:8951263-8951282 | Msa0193130:CDS | 30.0% | |
| ! | GTGATGCTAATGTTTTCTAT+TGG | - | chr2_1:8951441-8951460 | Msa0193130:intron | 30.0% |
| GAAATTTGAGGAAGTGAATT+AGG | + | chr2_1:8951578-8951597 | None:intergenic | 30.0% | |
| ! | TTGGCAGGTATTAATTCTTT+TGG | + | chr2_1:8951647-8951666 | None:intergenic | 30.0% |
| !! | GCTGAAAATATGTTTGGTTT+TGG | + | chr2_1:8951736-8951755 | None:intergenic | 30.0% |
| ! | TTTGAGGCTGAAAATATGTT+TGG | + | chr2_1:8951742-8951761 | None:intergenic | 30.0% |
| CTAACAATGTTACATCACAA+GGG | - | chr2_1:8951858-8951877 | Msa0193130:intron | 30.0% | |
| !! | AACTTTTTCTGTAACTGCAT+AGG | + | chr2_1:8952203-8952222 | None:intergenic | 30.0% |
| ATAAACTAGTCAAGATCTTG+TGG | + | chr2_1:8952442-8952461 | None:intergenic | 30.0% | |
| ACTATGTTCTTAGGTTCTAT+AGG | + | chr2_1:8952528-8952547 | None:intergenic | 30.0% | |
| TATGGAAAAGAAGAGAAAGT+GGG | - | chr2_1:8952574-8952593 | Msa0193130:CDS | 30.0% | |
| AGATTAATGTGAATAAGACG+TGG | - | chr2_1:8952602-8952621 | Msa0193130:CDS | 30.0% | |
| !! | ACTTTTGGTAGCTATAGTTA+AGG | - | chr2_1:8952698-8952717 | Msa0193130:CDS | 30.0% |
| !!! | ATTTTGTTTTGCAGATGTAG+GGG | - | chr2_1:8953048-8953067 | Msa0193130:CDS | 30.0% |
| !! | AGTGATGAGGTTTTAATGTA+TGG | - | chr2_1:8953085-8953104 | Msa0193130:CDS | 30.0% |
| !! | GTACTATTGTGTTTGCTATT+AGG | - | chr2_1:8953175-8953194 | Msa0193130:exon | 30.0% |
| !! | GCTATATAAGAAGGTTTTGT+TGG | - | chr2_1:8950864-8950883 | Msa0193130:CDS | 30.0% |
| TTCTTCTTCTTTGTGGAAAT+AGG | - | chr2_1:8951263-8951282 | Msa0193130:CDS | 30.0% | |
| ! | GTGATGCTAATGTTTTCTAT+TGG | - | chr2_1:8951441-8951460 | Msa0193130:intron | 30.0% |
| GAAATTTGAGGAAGTGAATT+AGG | + | chr2_1:8951578-8951597 | None:intergenic | 30.0% | |
| ! | TTGGCAGGTATTAATTCTTT+TGG | + | chr2_1:8951647-8951666 | None:intergenic | 30.0% |
| !! | GCTGAAAATATGTTTGGTTT+TGG | + | chr2_1:8951736-8951755 | None:intergenic | 30.0% |
| ! | TTTGAGGCTGAAAATATGTT+TGG | + | chr2_1:8951742-8951761 | None:intergenic | 30.0% |
| CTAACAATGTTACATCACAA+GGG | - | chr2_1:8951858-8951877 | Msa0193130:intron | 30.0% | |
| !! | AACTTTTTCTGTAACTGCAT+AGG | + | chr2_1:8952203-8952222 | None:intergenic | 30.0% |
| ATAAACTAGTCAAGATCTTG+TGG | + | chr2_1:8952442-8952461 | None:intergenic | 30.0% | |
| ACTATGTTCTTAGGTTCTAT+AGG | + | chr2_1:8952528-8952547 | None:intergenic | 30.0% | |
| TATGGAAAAGAAGAGAAAGT+GGG | - | chr2_1:8952574-8952593 | Msa0193130:CDS | 30.0% | |
| AGATTAATGTGAATAAGACG+TGG | - | chr2_1:8952602-8952621 | Msa0193130:CDS | 30.0% | |
| !! | ACTTTTGGTAGCTATAGTTA+AGG | - | chr2_1:8952698-8952717 | Msa0193130:CDS | 30.0% |
| !!! | ATTTTGTTTTGCAGATGTAG+GGG | - | chr2_1:8953048-8953067 | Msa0193130:CDS | 30.0% |
| !! | AGTGATGAGGTTTTAATGTA+TGG | - | chr2_1:8953085-8953104 | Msa0193130:CDS | 30.0% |
| !! | GTACTATTGTGTTTGCTATT+AGG | - | chr2_1:8953175-8953194 | Msa0193130:exon | 30.0% |
| ATAATTACCTGAGGAGTAAG+GGG | + | chr2_1:8951119-8951138 | None:intergenic | 35.0% | |
| GATAATTACCTGAGGAGTAA+GGG | + | chr2_1:8951120-8951139 | None:intergenic | 35.0% | |
| AGATAATTACCTGAGGAGTA+AGG | + | chr2_1:8951121-8951140 | None:intergenic | 35.0% | |
| TGAAGATAGCTTCAAGTATG+CGG | + | chr2_1:8951346-8951365 | None:intergenic | 35.0% | |
| CTTGAAGCTATCTTCAATTC+TGG | - | chr2_1:8951350-8951369 | Msa0193130:CDS | 35.0% | |
| ! | AGCTATCTTCAATTCTGGAA+TGG | - | chr2_1:8951355-8951374 | Msa0193130:CDS | 35.0% |
| ATCTTCCTTATCTCTTCTCT+TGG | + | chr2_1:8951389-8951408 | None:intergenic | 35.0% | |
| ! | TATGCTTGCTTCTTGATTTG+CGG | + | chr2_1:8951475-8951494 | None:intergenic | 35.0% |
| !!! | TCTGATTCTTGTTCTGGTTT+TGG | + | chr2_1:8951511-8951530 | None:intergenic | 35.0% |
| !!! | AGTGAATTAGGGTTTTGTTG+TGG | + | chr2_1:8951566-8951585 | None:intergenic | 35.0% |
| ! | GCAGGTATTAATTCTTTTGG+TGG | + | chr2_1:8951644-8951663 | None:intergenic | 35.0% |
| GAAACCAAGGGAAAATACTT+TGG | + | chr2_1:8951666-8951685 | None:intergenic | 35.0% | |
| ATTGATGTTAGGGAAACCAA+GGG | + | chr2_1:8951678-8951697 | None:intergenic | 35.0% | |
| GCACAACATCATTGATGTTA+GGG | + | chr2_1:8951688-8951707 | None:intergenic | 35.0% | |
| ! | AGAAGGGTAGTTACATTTTG+AGG | + | chr2_1:8951758-8951777 | None:intergenic | 35.0% |
| CCTTGTGATGTAACATTGTT+AGG | + | chr2_1:8951860-8951879 | None:intergenic | 35.0% | |
| CCTAACAATGTTACATCACA+AGG | - | chr2_1:8951857-8951876 | Msa0193130:intron | 35.0% | |
| ! | CTTTTCTGAACTTTCCAACA+TGG | - | chr2_1:8951886-8951905 | Msa0193130:intron | 35.0% |
| ! | TCTTTGAGGAATTAACACCA+TGG | + | chr2_1:8951994-8952013 | None:intergenic | 35.0% |
| CTGTTCTTGATCTTTCTTTG+AGG | + | chr2_1:8952008-8952027 | None:intergenic | 35.0% | |
| CTCAAAGAAAGATCAAGAAC+AGG | - | chr2_1:8952006-8952025 | Msa0193130:intron | 35.0% | |
| TAAAACAGTAGTAGGAGTTG+TGG | + | chr2_1:8952092-8952111 | None:intergenic | 35.0% | |
| GTAGGATGTAAAACAGTAGT+AGG | + | chr2_1:8952100-8952119 | None:intergenic | 35.0% | |
| ATGTTCTTAGGTTCTATAGG+CGG | + | chr2_1:8952525-8952544 | None:intergenic | 35.0% | |
| GTATGGAAAAGAAGAGAAAG+TGG | - | chr2_1:8952573-8952592 | Msa0193130:CDS | 35.0% | |
| ! | GTTAGTGTACCATGGTTTTT+GGG | - | chr2_1:8952624-8952643 | Msa0193130:CDS | 35.0% |
| !! | GGCTCTATTGGCTTAAATAT+AGG | - | chr2_1:8952659-8952678 | Msa0193130:CDS | 35.0% |
| GAAATGATTGAGTGTATCTC+AGG | - | chr2_1:8952744-8952763 | Msa0193130:CDS | 35.0% | |
| AGTGGTGTTTATCAATGATG+TGG | - | chr2_1:8952797-8952816 | Msa0193130:CDS | 35.0% | |
| !! | ATCTGTGCTGTTCTAAAGTA+TGG | - | chr2_1:8953254-8953273 | Msa0193130:five_prime_UTR | 35.0% |
| ATAATTACCTGAGGAGTAAG+GGG | + | chr2_1:8951119-8951138 | None:intergenic | 35.0% | |
| GATAATTACCTGAGGAGTAA+GGG | + | chr2_1:8951120-8951139 | None:intergenic | 35.0% | |
| AGATAATTACCTGAGGAGTA+AGG | + | chr2_1:8951121-8951140 | None:intergenic | 35.0% | |
| TGAAGATAGCTTCAAGTATG+CGG | + | chr2_1:8951346-8951365 | None:intergenic | 35.0% | |
| CTTGAAGCTATCTTCAATTC+TGG | - | chr2_1:8951350-8951369 | Msa0193130:CDS | 35.0% | |
| ! | AGCTATCTTCAATTCTGGAA+TGG | - | chr2_1:8951355-8951374 | Msa0193130:CDS | 35.0% |
| ATCTTCCTTATCTCTTCTCT+TGG | + | chr2_1:8951389-8951408 | None:intergenic | 35.0% | |
| ! | TATGCTTGCTTCTTGATTTG+CGG | + | chr2_1:8951475-8951494 | None:intergenic | 35.0% |
| !!! | TCTGATTCTTGTTCTGGTTT+TGG | + | chr2_1:8951511-8951530 | None:intergenic | 35.0% |
| !!! | AGTGAATTAGGGTTTTGTTG+TGG | + | chr2_1:8951566-8951585 | None:intergenic | 35.0% |
| ! | GCAGGTATTAATTCTTTTGG+TGG | + | chr2_1:8951644-8951663 | None:intergenic | 35.0% |
| GAAACCAAGGGAAAATACTT+TGG | + | chr2_1:8951666-8951685 | None:intergenic | 35.0% | |
| ATTGATGTTAGGGAAACCAA+GGG | + | chr2_1:8951678-8951697 | None:intergenic | 35.0% | |
| GCACAACATCATTGATGTTA+GGG | + | chr2_1:8951688-8951707 | None:intergenic | 35.0% | |
| ! | AGAAGGGTAGTTACATTTTG+AGG | + | chr2_1:8951758-8951777 | None:intergenic | 35.0% |
| CCTTGTGATGTAACATTGTT+AGG | + | chr2_1:8951860-8951879 | None:intergenic | 35.0% | |
| CCTAACAATGTTACATCACA+AGG | - | chr2_1:8951857-8951876 | Msa0193130:intron | 35.0% | |
| ! | CTTTTCTGAACTTTCCAACA+TGG | - | chr2_1:8951886-8951905 | Msa0193130:intron | 35.0% |
| ! | TCTTTGAGGAATTAACACCA+TGG | + | chr2_1:8951994-8952013 | None:intergenic | 35.0% |
| CTGTTCTTGATCTTTCTTTG+AGG | + | chr2_1:8952008-8952027 | None:intergenic | 35.0% | |
| CTCAAAGAAAGATCAAGAAC+AGG | - | chr2_1:8952006-8952025 | Msa0193130:intron | 35.0% | |
| TAAAACAGTAGTAGGAGTTG+TGG | + | chr2_1:8952092-8952111 | None:intergenic | 35.0% | |
| GTAGGATGTAAAACAGTAGT+AGG | + | chr2_1:8952100-8952119 | None:intergenic | 35.0% | |
| ATGTTCTTAGGTTCTATAGG+CGG | + | chr2_1:8952525-8952544 | None:intergenic | 35.0% | |
| GTATGGAAAAGAAGAGAAAG+TGG | - | chr2_1:8952573-8952592 | Msa0193130:CDS | 35.0% | |
| ! | GTTAGTGTACCATGGTTTTT+GGG | - | chr2_1:8952624-8952643 | Msa0193130:CDS | 35.0% |
| !! | GGCTCTATTGGCTTAAATAT+AGG | - | chr2_1:8952659-8952678 | Msa0193130:CDS | 35.0% |
| GAAATGATTGAGTGTATCTC+AGG | - | chr2_1:8952744-8952763 | Msa0193130:CDS | 35.0% | |
| AGTGGTGTTTATCAATGATG+TGG | - | chr2_1:8952797-8952816 | Msa0193130:CDS | 35.0% | |
| !! | ATCTGTGCTGTTCTAAAGTA+TGG | - | chr2_1:8953254-8953273 | Msa0193130:five_prime_UTR | 35.0% |
| !!! | AGAAGGTTTTGTTGGTTCTG+TGG | - | chr2_1:8950872-8950891 | Msa0193130:CDS | 40.0% |
| !!! | GAAGGTTTTGTTGGTTCTGT+GGG | - | chr2_1:8950873-8950892 | Msa0193130:CDS | 40.0% |
| TGGCTTCATCAAATAGACAC+TGG | - | chr2_1:8951002-8951021 | Msa0193130:intron | 40.0% | |
| GGCTTAGACTTAAACATGCT+TGG | + | chr2_1:8951028-8951047 | None:intergenic | 40.0% | |
| !!! | ATGCGGATTTGTTCTGGTTT+TGG | + | chr2_1:8951329-8951348 | None:intergenic | 40.0% |
| ! | TCAAGTATGCGGATTTGTTC+TGG | + | chr2_1:8951335-8951354 | None:intergenic | 40.0% |
| ATCCACCAAGAGAAGAGATA+AGG | - | chr2_1:8951381-8951400 | Msa0193130:CDS | 40.0% | |
| TTCCTTATCTCTTCTCTTGG+TGG | + | chr2_1:8951386-8951405 | None:intergenic | 40.0% | |
| ! | TTGCAAGAGTATGGTCAAGT+TGG | - | chr2_1:8951419-8951438 | Msa0193130:intron | 40.0% |
| !!! | TGCTTCTTGATTTGCGGTTT+TGG | + | chr2_1:8951469-8951488 | None:intergenic | 40.0% |
| !!! | TCTTGTTCTGGTTTTGGAGA+TGG | + | chr2_1:8951505-8951524 | None:intergenic | 40.0% |
| !! | TCTGGTTCTGATTCTTGTTC+TGG | + | chr2_1:8951517-8951536 | None:intergenic | 40.0% |
| CCTGATTCTGATTCTGATTC+TGG | + | chr2_1:8951535-8951554 | None:intergenic | 40.0% | |
| CCAGAATCAGAATCAGAATC+AGG | - | chr2_1:8951532-8951551 | Msa0193130:intron | 40.0% | |
| GGTACAGTAGCAGAAATTTG+AGG | + | chr2_1:8951590-8951609 | None:intergenic | 40.0% | |
| GAGGAAGATGAAGAAGATGA+AGG | + | chr2_1:8951611-8951630 | None:intergenic | 40.0% | |
| ! | TTTTGGTGGAGATTTCTCAG+AGG | + | chr2_1:8951630-8951649 | None:intergenic | 40.0% |
| CATTGATGTTAGGGAAACCA+AGG | + | chr2_1:8951679-8951698 | None:intergenic | 40.0% | |
| GGCACAACATCATTGATGTT+AGG | + | chr2_1:8951689-8951708 | None:intergenic | 40.0% | |
| ACAGAAGCAGTTGGAGAATT+AGG | + | chr2_1:8951710-8951729 | None:intergenic | 40.0% | |
| !!! | TTTTGGTTCACAGAAGCAGT+TGG | + | chr2_1:8951719-8951738 | None:intergenic | 40.0% |
| AAGAAGAAAGTCTCAGTAGC+TGG | + | chr2_1:8951803-8951822 | None:intergenic | 40.0% | |
| TAGTGCAGTTACCAGTGTTA+TGG | + | chr2_1:8951940-8951959 | None:intergenic | 40.0% | |
| TGTTCATGATCTCACTAAGC+AGG | + | chr2_1:8951970-8951989 | None:intergenic | 40.0% | |
| AGTGAGATCATGAACAACCA+TGG | - | chr2_1:8951974-8951993 | Msa0193130:intron | 40.0% | |
| AAACAGATGTTCAGATGTGG+GGG | + | chr2_1:8952061-8952080 | None:intergenic | 40.0% | |
| CAAACAGATGTTCAGATGTG+GGG | + | chr2_1:8952062-8952081 | None:intergenic | 40.0% | |
| GCAAACAGATGTTCAGATGT+GGG | + | chr2_1:8952063-8952082 | None:intergenic | 40.0% | |
| GATAGGTGATTGAACAGTGA+TGG | + | chr2_1:8952134-8952153 | None:intergenic | 40.0% | |
| CCTTGCACTTGAGAAATGAT+AGG | + | chr2_1:8952151-8952170 | None:intergenic | 40.0% | |
| CCTATCATTTCTCAAGTGCA+AGG | - | chr2_1:8952148-8952167 | Msa0193130:CDS | 40.0% | |
| ! | GGTTAGTGTACCATGGTTTT+TGG | - | chr2_1:8952623-8952642 | Msa0193130:CDS | 40.0% |
| ATTGAGTGTATCTCAGGCAT+TGG | - | chr2_1:8952750-8952769 | Msa0193130:CDS | 40.0% | |
| TATCAATGATGTGGCCTTTG+AGG | - | chr2_1:8952806-8952825 | Msa0193130:CDS | 40.0% | |
| ! | TGGACCTTTTAATGTTCGTG+CGG | - | chr2_1:8952836-8952855 | Msa0193130:CDS | 40.0% |
| AATGCCGCACGAACATTAAA+AGG | + | chr2_1:8952843-8952862 | None:intergenic | 40.0% | |
| TTTAATGTTCGTGCGGCATT+TGG | - | chr2_1:8952843-8952862 | Msa0193130:CDS | 40.0% | |
| TTAATGTTCGTGCGGCATTT+GGG | - | chr2_1:8952844-8952863 | Msa0193130:CDS | 40.0% | |
| GCTGTTCTTGTACATCAAAC+TGG | - | chr2_1:8952873-8952892 | Msa0193130:CDS | 40.0% | |
| !! | CCATACTGGTTTGTTAACAC+AGG | + | chr2_1:8952903-8952922 | None:intergenic | 40.0% |
| CCTGTGTTAACAAACCAGTA+TGG | - | chr2_1:8952900-8952919 | Msa0193130:intron | 40.0% | |
| GAAAATAACATGCACCATGC+TGG | + | chr2_1:8952944-8952963 | None:intergenic | 40.0% | |
| AGATGTAGGGGAAAAAATGC+TGG | - | chr2_1:8953060-8953079 | Msa0193130:CDS | 40.0% | |
| AAAAATGCTGGAGAGTGATG+AGG | - | chr2_1:8953072-8953091 | Msa0193130:CDS | 40.0% | |
| !!! | AGAAGGTTTTGTTGGTTCTG+TGG | - | chr2_1:8950872-8950891 | Msa0193130:CDS | 40.0% |
| !!! | GAAGGTTTTGTTGGTTCTGT+GGG | - | chr2_1:8950873-8950892 | Msa0193130:CDS | 40.0% |
| TGGCTTCATCAAATAGACAC+TGG | - | chr2_1:8951002-8951021 | Msa0193130:intron | 40.0% | |
| GGCTTAGACTTAAACATGCT+TGG | + | chr2_1:8951028-8951047 | None:intergenic | 40.0% | |
| !!! | ATGCGGATTTGTTCTGGTTT+TGG | + | chr2_1:8951329-8951348 | None:intergenic | 40.0% |
| ! | TCAAGTATGCGGATTTGTTC+TGG | + | chr2_1:8951335-8951354 | None:intergenic | 40.0% |
| ATCCACCAAGAGAAGAGATA+AGG | - | chr2_1:8951381-8951400 | Msa0193130:CDS | 40.0% | |
| TTCCTTATCTCTTCTCTTGG+TGG | + | chr2_1:8951386-8951405 | None:intergenic | 40.0% | |
| ! | TTGCAAGAGTATGGTCAAGT+TGG | - | chr2_1:8951419-8951438 | Msa0193130:intron | 40.0% |
| !!! | TGCTTCTTGATTTGCGGTTT+TGG | + | chr2_1:8951469-8951488 | None:intergenic | 40.0% |
| !!! | TCTTGTTCTGGTTTTGGAGA+TGG | + | chr2_1:8951505-8951524 | None:intergenic | 40.0% |
| !! | TCTGGTTCTGATTCTTGTTC+TGG | + | chr2_1:8951517-8951536 | None:intergenic | 40.0% |
| CCTGATTCTGATTCTGATTC+TGG | + | chr2_1:8951535-8951554 | None:intergenic | 40.0% | |
| CCAGAATCAGAATCAGAATC+AGG | - | chr2_1:8951532-8951551 | Msa0193130:intron | 40.0% | |
| GGTACAGTAGCAGAAATTTG+AGG | + | chr2_1:8951590-8951609 | None:intergenic | 40.0% | |
| GAGGAAGATGAAGAAGATGA+AGG | + | chr2_1:8951611-8951630 | None:intergenic | 40.0% | |
| ! | TTTTGGTGGAGATTTCTCAG+AGG | + | chr2_1:8951630-8951649 | None:intergenic | 40.0% |
| CATTGATGTTAGGGAAACCA+AGG | + | chr2_1:8951679-8951698 | None:intergenic | 40.0% | |
| GGCACAACATCATTGATGTT+AGG | + | chr2_1:8951689-8951708 | None:intergenic | 40.0% | |
| ACAGAAGCAGTTGGAGAATT+AGG | + | chr2_1:8951710-8951729 | None:intergenic | 40.0% | |
| !!! | TTTTGGTTCACAGAAGCAGT+TGG | + | chr2_1:8951719-8951738 | None:intergenic | 40.0% |
| AAGAAGAAAGTCTCAGTAGC+TGG | + | chr2_1:8951803-8951822 | None:intergenic | 40.0% | |
| TAGTGCAGTTACCAGTGTTA+TGG | + | chr2_1:8951940-8951959 | None:intergenic | 40.0% | |
| TGTTCATGATCTCACTAAGC+AGG | + | chr2_1:8951970-8951989 | None:intergenic | 40.0% | |
| AGTGAGATCATGAACAACCA+TGG | - | chr2_1:8951974-8951993 | Msa0193130:intron | 40.0% | |
| AAACAGATGTTCAGATGTGG+GGG | + | chr2_1:8952061-8952080 | None:intergenic | 40.0% | |
| CAAACAGATGTTCAGATGTG+GGG | + | chr2_1:8952062-8952081 | None:intergenic | 40.0% | |
| GCAAACAGATGTTCAGATGT+GGG | + | chr2_1:8952063-8952082 | None:intergenic | 40.0% | |
| GATAGGTGATTGAACAGTGA+TGG | + | chr2_1:8952134-8952153 | None:intergenic | 40.0% | |
| CCTTGCACTTGAGAAATGAT+AGG | + | chr2_1:8952151-8952170 | None:intergenic | 40.0% | |
| CCTATCATTTCTCAAGTGCA+AGG | - | chr2_1:8952148-8952167 | Msa0193130:CDS | 40.0% | |
| ! | GGTTAGTGTACCATGGTTTT+TGG | - | chr2_1:8952623-8952642 | Msa0193130:CDS | 40.0% |
| ATTGAGTGTATCTCAGGCAT+TGG | - | chr2_1:8952750-8952769 | Msa0193130:CDS | 40.0% | |
| TATCAATGATGTGGCCTTTG+AGG | - | chr2_1:8952806-8952825 | Msa0193130:CDS | 40.0% | |
| ! | TGGACCTTTTAATGTTCGTG+CGG | - | chr2_1:8952836-8952855 | Msa0193130:CDS | 40.0% |
| AATGCCGCACGAACATTAAA+AGG | + | chr2_1:8952843-8952862 | None:intergenic | 40.0% | |
| TTTAATGTTCGTGCGGCATT+TGG | - | chr2_1:8952843-8952862 | Msa0193130:CDS | 40.0% | |
| TTAATGTTCGTGCGGCATTT+GGG | - | chr2_1:8952844-8952863 | Msa0193130:CDS | 40.0% | |
| GCTGTTCTTGTACATCAAAC+TGG | - | chr2_1:8952873-8952892 | Msa0193130:CDS | 40.0% | |
| !! | CCATACTGGTTTGTTAACAC+AGG | + | chr2_1:8952903-8952922 | None:intergenic | 40.0% |
| CCTGTGTTAACAAACCAGTA+TGG | - | chr2_1:8952900-8952919 | Msa0193130:intron | 40.0% | |
| GAAAATAACATGCACCATGC+TGG | + | chr2_1:8952944-8952963 | None:intergenic | 40.0% | |
| AGATGTAGGGGAAAAAATGC+TGG | - | chr2_1:8953060-8953079 | Msa0193130:CDS | 40.0% | |
| AAAAATGCTGGAGAGTGATG+AGG | - | chr2_1:8953072-8953091 | Msa0193130:CDS | 40.0% | |
| !! | CATTGGTGATGAGTGTTGCA+GGG | + | chr2_1:8951049-8951068 | None:intergenic | 45.0% |
| ! | AGTTGATGTCATGCTGCCAT+TGG | + | chr2_1:8951066-8951085 | None:intergenic | 45.0% |
| TTTGGATTCCACCTTGGCTT+TGG | + | chr2_1:8951311-8951330 | None:intergenic | 45.0% | |
| !!! | TCTGGTTTTGGATTCCACCT+TGG | + | chr2_1:8951317-8951336 | None:intergenic | 45.0% |
| AGAGCACAGTTGCAAGAGTA+TGG | - | chr2_1:8951410-8951429 | Msa0193130:intron | 45.0% | |
| CCAAGGGAAAATACTTTGGC+AGG | + | chr2_1:8951662-8951681 | None:intergenic | 45.0% | |
| !! | CCTGCCAAAGTATTTTCCCT+TGG | - | chr2_1:8951659-8951678 | Msa0193130:intron | 45.0% |
| !! | TACTTGTGGTGGTGGAAGAA+GGG | + | chr2_1:8951774-8951793 | None:intergenic | 45.0% |
| !! | TTACTTGTGGTGGTGGAAGA+AGG | + | chr2_1:8951775-8951794 | None:intergenic | 45.0% |
| TTCTTCCCAGTGCAACATCA+TGG | - | chr2_1:8951818-8951837 | Msa0193130:intron | 45.0% | |
| CTTGTCCATGATGTTGCACT+GGG | + | chr2_1:8951826-8951845 | None:intergenic | 45.0% | |
| !! | TTATGGTGTTGCTGACCATG+TGG | + | chr2_1:8951923-8951942 | None:intergenic | 45.0% |
| AACAGATGTTCAGATGTGGG+GGG | + | chr2_1:8952060-8952079 | None:intergenic | 45.0% | |
| GGCAAACAGATGTTCAGATG+TGG | + | chr2_1:8952064-8952083 | None:intergenic | 45.0% | |
| AACAGTAGTAGGAGTTGTGG+CGG | + | chr2_1:8952089-8952108 | None:intergenic | 45.0% | |
| !! | TGATTGAACAGTGATGGTGG+AGG | + | chr2_1:8952128-8952147 | None:intergenic | 45.0% |
| AGGTGATTGAACAGTGATGG+TGG | + | chr2_1:8952131-8952150 | None:intergenic | 45.0% | |
| AAGACGTGGTTAGTGTACCA+TGG | - | chr2_1:8952616-8952635 | Msa0193130:CDS | 45.0% | |
| !! | ACTGATTTTGCAGCAACACC+TGG | + | chr2_1:8952780-8952799 | None:intergenic | 45.0% |
| !! | AGGTGTTGCTGCAAAATCAG+TGG | - | chr2_1:8952779-8952798 | Msa0193130:CDS | 45.0% |
| TAATGTTCGTGCGGCATTTG+GGG | - | chr2_1:8952845-8952864 | Msa0193130:CDS | 45.0% | |
| AGTGAAGAGTGACACCATAC+TGG | + | chr2_1:8952917-8952936 | None:intergenic | 45.0% | |
| !! | CATTGGTGATGAGTGTTGCA+GGG | + | chr2_1:8951049-8951068 | None:intergenic | 45.0% |
| ! | AGTTGATGTCATGCTGCCAT+TGG | + | chr2_1:8951066-8951085 | None:intergenic | 45.0% |
| TTTGGATTCCACCTTGGCTT+TGG | + | chr2_1:8951311-8951330 | None:intergenic | 45.0% | |
| !!! | TCTGGTTTTGGATTCCACCT+TGG | + | chr2_1:8951317-8951336 | None:intergenic | 45.0% |
| AGAGCACAGTTGCAAGAGTA+TGG | - | chr2_1:8951410-8951429 | Msa0193130:intron | 45.0% | |
| CCAAGGGAAAATACTTTGGC+AGG | + | chr2_1:8951662-8951681 | None:intergenic | 45.0% | |
| !! | CCTGCCAAAGTATTTTCCCT+TGG | - | chr2_1:8951659-8951678 | Msa0193130:intron | 45.0% |
| !! | TACTTGTGGTGGTGGAAGAA+GGG | + | chr2_1:8951774-8951793 | None:intergenic | 45.0% |
| !! | TTACTTGTGGTGGTGGAAGA+AGG | + | chr2_1:8951775-8951794 | None:intergenic | 45.0% |
| TTCTTCCCAGTGCAACATCA+TGG | - | chr2_1:8951818-8951837 | Msa0193130:intron | 45.0% | |
| CTTGTCCATGATGTTGCACT+GGG | + | chr2_1:8951826-8951845 | None:intergenic | 45.0% | |
| !! | TTATGGTGTTGCTGACCATG+TGG | + | chr2_1:8951923-8951942 | None:intergenic | 45.0% |
| AACAGATGTTCAGATGTGGG+GGG | + | chr2_1:8952060-8952079 | None:intergenic | 45.0% | |
| GGCAAACAGATGTTCAGATG+TGG | + | chr2_1:8952064-8952083 | None:intergenic | 45.0% | |
| AACAGTAGTAGGAGTTGTGG+CGG | + | chr2_1:8952089-8952108 | None:intergenic | 45.0% | |
| !! | TGATTGAACAGTGATGGTGG+AGG | + | chr2_1:8952128-8952147 | None:intergenic | 45.0% |
| AGGTGATTGAACAGTGATGG+TGG | + | chr2_1:8952131-8952150 | None:intergenic | 45.0% | |
| AAGACGTGGTTAGTGTACCA+TGG | - | chr2_1:8952616-8952635 | Msa0193130:CDS | 45.0% | |
| !! | ACTGATTTTGCAGCAACACC+TGG | + | chr2_1:8952780-8952799 | None:intergenic | 45.0% |
| !! | AGGTGTTGCTGCAAAATCAG+TGG | - | chr2_1:8952779-8952798 | Msa0193130:CDS | 45.0% |
| TAATGTTCGTGCGGCATTTG+GGG | - | chr2_1:8952845-8952864 | Msa0193130:CDS | 45.0% | |
| AGTGAAGAGTGACACCATAC+TGG | + | chr2_1:8952917-8952936 | None:intergenic | 45.0% | |
| !!! | TATTTTTTTATTTTTCTTTT+AGG | - | chr2_1:8952459-8952478 | Msa0193130:CDS | 5.0% |
| !!! | TATTTTTTTATTTTTCTTTT+AGG | - | chr2_1:8952459-8952478 | Msa0193130:CDS | 5.0% |
| !! | CCATTGGTGATGAGTGTTGC+AGG | + | chr2_1:8951050-8951069 | None:intergenic | 50.0% |
| CCTGCAACACTCATCACCAA+TGG | - | chr2_1:8951047-8951066 | Msa0193130:intron | 50.0% | |
| GTAGCTGGTGCAGTTACTTG+TGG | + | chr2_1:8951788-8951807 | None:intergenic | 50.0% | |
| CCTTGTCCATGATGTTGCAC+TGG | + | chr2_1:8951827-8951846 | None:intergenic | 50.0% | |
| CCAGTGCAACATCATGGACA+AGG | - | chr2_1:8951824-8951843 | Msa0193130:intron | 50.0% | |
| TGGTTGAGCAGGAACCATGT+TGG | + | chr2_1:8951903-8951922 | None:intergenic | 50.0% | |
| ATGGTTCCTGCTCAACCACA+TGG | - | chr2_1:8951905-8951924 | Msa0193130:intron | 50.0% | |
| GGTCAGCAACACCATAACAC+TGG | - | chr2_1:8951926-8951945 | Msa0193130:intron | 50.0% | |
| TGTTCAGATGTGGGGGGATT+TGG | + | chr2_1:8952054-8952073 | None:intergenic | 50.0% | |
| ACAGTAGTAGGAGTTGTGGC+GGG | + | chr2_1:8952088-8952107 | None:intergenic | 50.0% | |
| !! | GTGATGGTGGAGGAAGTAGT+AGG | + | chr2_1:8952118-8952137 | None:intergenic | 50.0% |
| CACACGTGACCCAAAAACCA+TGG | + | chr2_1:8952636-8952655 | None:intergenic | 50.0% | |
| !!! | GTTTTTGGGTCACGTGTGCA+TGG | - | chr2_1:8952638-8952657 | Msa0193130:CDS | 50.0% |
| ! | TCACGTGTGCATGGCTCTAT+TGG | - | chr2_1:8952647-8952666 | Msa0193130:CDS | 50.0% |
| !! | ATCTCAGGCATTGGTGAACC+AGG | - | chr2_1:8952759-8952778 | Msa0193130:CDS | 50.0% |
| AGGTCCAGAAGCAACCTCAA+AGG | + | chr2_1:8952823-8952842 | None:intergenic | 50.0% | |
| ACTCTTCACTCACTCCAGCA+TGG | - | chr2_1:8952927-8952946 | Msa0193130:intron | 50.0% | |
| !! | CCATTGGTGATGAGTGTTGC+AGG | + | chr2_1:8951050-8951069 | None:intergenic | 50.0% |
| CCTGCAACACTCATCACCAA+TGG | - | chr2_1:8951047-8951066 | Msa0193130:intron | 50.0% | |
| GTAGCTGGTGCAGTTACTTG+TGG | + | chr2_1:8951788-8951807 | None:intergenic | 50.0% | |
| CCTTGTCCATGATGTTGCAC+TGG | + | chr2_1:8951827-8951846 | None:intergenic | 50.0% | |
| CCAGTGCAACATCATGGACA+AGG | - | chr2_1:8951824-8951843 | Msa0193130:intron | 50.0% | |
| TGGTTGAGCAGGAACCATGT+TGG | + | chr2_1:8951903-8951922 | None:intergenic | 50.0% | |
| ATGGTTCCTGCTCAACCACA+TGG | - | chr2_1:8951905-8951924 | Msa0193130:intron | 50.0% | |
| GGTCAGCAACACCATAACAC+TGG | - | chr2_1:8951926-8951945 | Msa0193130:intron | 50.0% | |
| TGTTCAGATGTGGGGGGATT+TGG | + | chr2_1:8952054-8952073 | None:intergenic | 50.0% | |
| ACAGTAGTAGGAGTTGTGGC+GGG | + | chr2_1:8952088-8952107 | None:intergenic | 50.0% | |
| !! | GTGATGGTGGAGGAAGTAGT+AGG | + | chr2_1:8952118-8952137 | None:intergenic | 50.0% |
| CACACGTGACCCAAAAACCA+TGG | + | chr2_1:8952636-8952655 | None:intergenic | 50.0% | |
| !!! | GTTTTTGGGTCACGTGTGCA+TGG | - | chr2_1:8952638-8952657 | Msa0193130:CDS | 50.0% |
| ! | TCACGTGTGCATGGCTCTAT+TGG | - | chr2_1:8952647-8952666 | Msa0193130:CDS | 50.0% |
| !! | ATCTCAGGCATTGGTGAACC+AGG | - | chr2_1:8952759-8952778 | Msa0193130:CDS | 50.0% |
| AGGTCCAGAAGCAACCTCAA+AGG | + | chr2_1:8952823-8952842 | None:intergenic | 50.0% | |
| ACTCTTCACTCACTCCAGCA+TGG | - | chr2_1:8952927-8952946 | Msa0193130:intron | 50.0% | |
| CACAGAACCCCTTACTCCTC+AGG | - | chr2_1:8951109-8951128 | Msa0193130:intron | 55.0% | |
| GAAGTCCTGAGCCAAAGCCA+AGG | - | chr2_1:8951297-8951316 | Msa0193130:CDS | 55.0% | |
| !! | TTCCACCTTGGCTTTGGCTC+AGG | + | chr2_1:8951305-8951324 | None:intergenic | 55.0% |
| GGTGCAGTTACTTGTGGTGG+TGG | + | chr2_1:8951782-8951801 | None:intergenic | 55.0% | |
| GCTGGTGCAGTTACTTGTGG+TGG | + | chr2_1:8951785-8951804 | None:intergenic | 55.0% | |
| TGCTGACCATGTGGTTGAGC+AGG | + | chr2_1:8951914-8951933 | None:intergenic | 55.0% | |
| !! | GTGGCCTTTGAGGTTGCTTC+TGG | - | chr2_1:8952816-8952835 | Msa0193130:CDS | 55.0% |
| CACAGAACCCCTTACTCCTC+AGG | - | chr2_1:8951109-8951128 | Msa0193130:intron | 55.0% | |
| GAAGTCCTGAGCCAAAGCCA+AGG | - | chr2_1:8951297-8951316 | Msa0193130:CDS | 55.0% | |
| !! | TTCCACCTTGGCTTTGGCTC+AGG | + | chr2_1:8951305-8951324 | None:intergenic | 55.0% |
| GGTGCAGTTACTTGTGGTGG+TGG | + | chr2_1:8951782-8951801 | None:intergenic | 55.0% | |
| GCTGGTGCAGTTACTTGTGG+TGG | + | chr2_1:8951785-8951804 | None:intergenic | 55.0% | |
| TGCTGACCATGTGGTTGAGC+AGG | + | chr2_1:8951914-8951933 | None:intergenic | 55.0% | |
| !! | GTGGCCTTTGAGGTTGCTTC+TGG | - | chr2_1:8952816-8952835 | Msa0193130:CDS | 55.0% |
| GTCCTGAGCCAAAGCCAAGG+TGG | - | chr2_1:8951300-8951319 | Msa0193130:CDS | 60.0% | |
| ! | GTAGTAGGAGTTGTGGCGGG+TGG | + | chr2_1:8952085-8952104 | None:intergenic | 60.0% |
| GTCCTGAGCCAAAGCCAAGG+TGG | - | chr2_1:8951300-8951319 | Msa0193130:CDS | 60.0% | |
| ! | GTAGTAGGAGTTGTGGCGGG+TGG | + | chr2_1:8952085-8952104 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 8950864 | 8953313 | 8950864 | ID=Msa0193130;Name=Msa0193130 |
| chr2_1 | mRNA | 8950864 | 8953313 | 8950864 | ID=Msa0193130-mRNA-1;Parent=Msa0193130;Name=Msa0193130-mRNA-1;_AED=0.03;_eAED=0.03;_QI=137|0.33|0.25|1|0.66|0.75|4|0|443 |
| chr2_1 | exon | 8950864 | 8950980 | 8950864 | ID=Msa0193130-mRNA-1:exon:4069;Parent=Msa0193130-mRNA-1 |
| chr2_1 | exon | 8951212 | 8951411 | 8951212 | ID=Msa0193130-mRNA-1:exon:4068;Parent=Msa0193130-mRNA-1 |
| chr2_1 | exon | 8952008 | 8952892 | 8952008 | ID=Msa0193130-mRNA-1:exon:4067;Parent=Msa0193130-mRNA-1 |
| chr2_1 | exon | 8953047 | 8953313 | 8953047 | ID=Msa0193130-mRNA-1:exon:4066;Parent=Msa0193130-mRNA-1 |
| chr2_1 | five_prime_UTR | 8953177 | 8953313 | 8953177 | ID=Msa0193130-mRNA-1:five_prime_utr;Parent=Msa0193130-mRNA-1 |
| chr2_1 | CDS | 8953047 | 8953176 | 8953047 | ID=Msa0193130-mRNA-1:cds;Parent=Msa0193130-mRNA-1 |
| chr2_1 | CDS | 8952008 | 8952892 | 8952008 | ID=Msa0193130-mRNA-1:cds;Parent=Msa0193130-mRNA-1 |
| chr2_1 | CDS | 8951212 | 8951411 | 8951212 | ID=Msa0193130-mRNA-1:cds;Parent=Msa0193130-mRNA-1 |
| chr2_1 | CDS | 8950864 | 8950980 | 8950864 | ID=Msa0193130-mRNA-1:cds;Parent=Msa0193130-mRNA-1 |
| Gene Sequence |
| Protein sequence |
