Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234360 | AES63937.1 | 94.748 | 457 | 11 | 1 | 1 | 444 | 1 | 457 | 0.0 | 884 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234360 | sp|Q6X7J5|WOX8_ARATH | 36.538 | 416 | 161 | 11 | 1 | 405 | 1 | 324 | 5.01e-72 | 233 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234360 | G7IFI6 | 94.748 | 457 | 11 | 1 | 1 | 444 | 1 | 457 | 0.0 | 884 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0234360 | TF | HB-WOX |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0193130 | Msa0234360 | 0.878033 | 3.895208e-69 | -8.615850e-47 |
| Msa0234360 | Msa0273150 | 0.920141 | 1.862612e-87 | -8.615850e-47 |
| Msa0234360 | Msa0308940 | 0.969271 | 7.062875e-130 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234360 | MtrunA17_Chr2g0283141 | 94.748 | 457 | 11 | 1 | 1 | 444 | 1 | 457 | 0.0 | 884 |
| Msa0234360 | MtrunA17_Chr7g0223471 | 44.647 | 439 | 178 | 18 | 1 | 407 | 1 | 406 | 1.13e-88 | 275 |
| Msa0234360 | MtrunA17_Chr4g0046231 | 36.676 | 349 | 180 | 10 | 74 | 405 | 1 | 325 | 4.14e-43 | 154 |
| Msa0234360 | MtrunA17_Chr6g0460691 | 66.667 | 60 | 20 | 0 | 47 | 106 | 24 | 83 | 7.94e-23 | 98.2 |
| Msa0234360 | MtrunA17_Chr7g0254251 | 59.341 | 91 | 36 | 1 | 39 | 129 | 13 | 102 | 3.04e-22 | 95.9 |
| Msa0234360 | MtrunA17_Chr7g0254251 | 44.615 | 65 | 36 | 0 | 341 | 405 | 201 | 265 | 1.54e-13 | 70.9 |
| Msa0234360 | MtrunA17_Chr4g0046251 | 59.375 | 64 | 26 | 0 | 342 | 405 | 21 | 84 | 5.83e-17 | 75.9 |
| Msa0234360 | MtrunA17_Chr4g0043891 | 37.805 | 82 | 51 | 0 | 50 | 131 | 3 | 84 | 8.01e-17 | 80.1 |
| Msa0234360 | MtrunA17_Chr8g0392991 | 35.238 | 105 | 68 | 0 | 55 | 159 | 96 | 200 | 1.60e-15 | 77.8 |
| Msa0234360 | MtrunA17_Chr1g0212511 | 44.615 | 65 | 36 | 0 | 53 | 117 | 83 | 147 | 3.72e-15 | 75.5 |
| Msa0234360 | MtrunA17_Chr5g0436661 | 45.312 | 64 | 35 | 0 | 55 | 118 | 33 | 96 | 5.86e-15 | 73.2 |
| Msa0234360 | MtrunA17_Chr3g0144021 | 37.363 | 91 | 56 | 1 | 24 | 114 | 52 | 141 | 6.00e-15 | 73.6 |
| Msa0234360 | MtrunA17_Chr7g0238431 | 43.836 | 73 | 41 | 0 | 49 | 121 | 2 | 74 | 1.85e-14 | 72.0 |
| Msa0234360 | MtrunA17_Chr5g0405351 | 42.667 | 75 | 42 | 1 | 49 | 122 | 24 | 98 | 4.41e-14 | 72.8 |
| Msa0234360 | MtrunA17_Chr4g0031341 | 48.387 | 62 | 32 | 0 | 55 | 116 | 25 | 86 | 6.67e-14 | 71.6 |
| Msa0234360 | MtrunA17_Chr1g0153171 | 50.000 | 60 | 30 | 0 | 55 | 114 | 90 | 149 | 1.19e-13 | 70.5 |
| Msa0234360 | MtrunA17_Chr7g0222981 | 42.424 | 66 | 38 | 0 | 49 | 114 | 62 | 127 | 1.49e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0234360 | AT5G45980.1 | 36.538 | 416 | 161 | 11 | 1 | 405 | 1 | 324 | 5.10e-73 | 233 |
| Msa0234360 | AT2G33880.1 | 85.714 | 126 | 14 | 3 | 1 | 124 | 1 | 124 | 4.81e-68 | 221 |
| Msa0234360 | AT2G33880.2 | 85.714 | 126 | 14 | 3 | 1 | 124 | 1 | 124 | 6.53e-68 | 221 |
| Msa0234360 | AT3G03660.1 | 64.286 | 70 | 24 | 1 | 38 | 106 | 15 | 84 | 1.89e-23 | 99.8 |
| Msa0234360 | AT3G03660.1 | 51.786 | 56 | 27 | 0 | 350 | 405 | 208 | 263 | 2.38e-12 | 67.4 |
| Msa0234360 | AT3G03660.2 | 64.286 | 70 | 24 | 1 | 38 | 106 | 15 | 84 | 3.08e-23 | 99.8 |
| Msa0234360 | AT3G03660.2 | 51.786 | 56 | 27 | 0 | 350 | 405 | 237 | 292 | 3.95e-12 | 67.4 |
| Msa0234360 | AT3G03660.4 | 64.286 | 70 | 24 | 1 | 38 | 106 | 15 | 84 | 4.83e-23 | 99.4 |
| Msa0234360 | AT3G03660.4 | 52.727 | 55 | 26 | 0 | 351 | 405 | 209 | 263 | 7.26e-12 | 66.6 |
| Msa0234360 | AT3G03660.3 | 64.286 | 70 | 24 | 1 | 38 | 106 | 15 | 84 | 7.10e-23 | 99.4 |
| Msa0234360 | AT3G03660.3 | 52.727 | 55 | 26 | 0 | 351 | 405 | 238 | 292 | 9.02e-12 | 66.6 |
| Msa0234360 | AT5G17810.3 | 67.797 | 59 | 18 | 1 | 49 | 106 | 14 | 72 | 5.02e-21 | 92.8 |
| Msa0234360 | AT5G17810.3 | 50.000 | 56 | 28 | 0 | 350 | 405 | 207 | 262 | 1.11e-12 | 68.6 |
| Msa0234360 | AT5G17810.1 | 67.797 | 59 | 18 | 1 | 49 | 106 | 14 | 72 | 5.06e-21 | 92.8 |
| Msa0234360 | AT5G17810.1 | 50.000 | 56 | 28 | 0 | 350 | 405 | 208 | 263 | 1.02e-12 | 68.6 |
| Msa0234360 | AT5G17810.2 | 67.797 | 59 | 18 | 1 | 49 | 106 | 14 | 72 | 5.06e-21 | 92.8 |
| Msa0234360 | AT5G17810.2 | 50.000 | 56 | 28 | 0 | 350 | 405 | 208 | 263 | 1.02e-12 | 68.6 |
| Msa0234360 | AT5G05770.1 | 34.066 | 91 | 60 | 0 | 55 | 145 | 29 | 119 | 8.35e-16 | 73.9 |
| Msa0234360 | AT3G18010.1 | 48.387 | 62 | 32 | 0 | 55 | 116 | 76 | 137 | 8.16e-15 | 75.9 |
| Msa0234360 | AT2G28610.1 | 48.529 | 68 | 35 | 0 | 49 | 116 | 2 | 69 | 1.28e-14 | 73.9 |
| Msa0234360 | AT1G20700.2 | 48.333 | 60 | 31 | 0 | 55 | 114 | 33 | 92 | 1.38e-14 | 71.2 |
| Msa0234360 | AT3G11260.1 | 45.312 | 64 | 35 | 0 | 55 | 118 | 24 | 87 | 1.76e-14 | 72.0 |
| Msa0234360 | AT1G20700.1 | 46.774 | 62 | 33 | 0 | 53 | 114 | 93 | 154 | 2.77e-14 | 72.0 |
| Msa0234360 | AT1G20700.3 | 48.333 | 60 | 31 | 0 | 55 | 114 | 95 | 154 | 2.96e-14 | 72.0 |
| Msa0234360 | AT1G46480.2 | 50.000 | 60 | 30 | 0 | 55 | 114 | 90 | 149 | 4.91e-14 | 70.9 |
| Msa0234360 | AT4G35550.1 | 45.161 | 62 | 34 | 0 | 53 | 114 | 97 | 158 | 1.16e-13 | 71.2 |
| Msa0234360 | AT1G46480.1 | 50.000 | 60 | 30 | 0 | 55 | 114 | 90 | 149 | 2.47e-13 | 70.1 |
| Msa0234360 | AT2G01500.1 | 50.909 | 55 | 27 | 0 | 55 | 109 | 61 | 115 | 7.29e-13 | 68.9 |
| Msa0234360 | AT5G46010.1 | 47.619 | 63 | 32 | 1 | 51 | 112 | 50 | 112 | 1.48e-12 | 64.7 |
| Msa0234360 | AT5G59340.1 | 43.333 | 60 | 34 | 0 | 55 | 114 | 14 | 73 | 1.71e-12 | 67.8 |
| Msa0234360 | AT2G17950.1 | 46.032 | 63 | 33 | 1 | 55 | 116 | 38 | 100 | 2.83e-12 | 67.8 |
Find 103 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTGATTCTGATTCTGATTC+TGG | 0.081403 | 2_2:+7101534 | None:intergenic |
| GAAATTTGAGGAAGTGAATT+AGG | 0.138466 | 2_2:+7101491 | None:intergenic |
| TGCTTCTTGATTTGCGGTTT+TGG | 0.159712 | 2_2:+7101600 | None:intergenic |
| TCTGATTCTTGTTCTGGTTT+TGG | 0.210118 | 2_2:+7101558 | None:intergenic |
| GTGGCCTTTGAGGTTGCTTC+TGG | 0.210381 | 2_2:-7100250 | Msa0234360:CDS |
| TCTGGTTCTGATTCTTGTTC+TGG | 0.215529 | 2_2:+7101552 | None:intergenic |
| ATTTATCATCATCATAATTA+TGG | 0.218372 | 2_2:-7102084 | Msa0234360:exon |
| CTTGAAGCTATCTTCAATTC+TGG | 0.223036 | 2_2:-7101716 | Msa0234360:CDS |
| TTTAATGTTCGTGCGGCATT+TGG | 0.234206 | 2_2:-7100223 | Msa0234360:CDS |
| ATGCGGATTTGTTCTGGTTT+TGG | 0.247339 | 2_2:+7101740 | None:intergenic |
| TTGGCAGGTATTAATTCTTT+TGG | 0.251759 | 2_2:+7101422 | None:intergenic |
| TTAATGTTCGTGCGGCATTT+GGG | 0.270781 | 2_2:-7100222 | Msa0234360:CDS |
| ATCTGTGCTGTTCTAAAGTA+TGG | 0.274072 | 2_2:-7099809 | Msa0234360:CDS |
| CCTTGTGATGTAACATTGTT+AGG | 0.298506 | 2_2:+7101209 | None:intergenic |
| TTTGGATTCCACCTTGGCTT+TGG | 0.309423 | 2_2:+7101758 | None:intergenic |
| CCATTGGTGATGAGTGTTGC+AGG | 0.323664 | 2_2:+7102019 | None:intergenic |
| TCAAGTATGCGGATTTGTTC+TGG | 0.334510 | 2_2:+7101734 | None:intergenic |
| AATGCCGCACGAACATTAAA+AGG | 0.340006 | 2_2:+7100226 | None:intergenic |
| GGCACAACATCATTGATGTT+AGG | 0.346091 | 2_2:+7101380 | None:intergenic |
| GCTGAAAATATGTTTGGTTT+TGG | 0.348978 | 2_2:+7101333 | None:intergenic |
| ATCTTCCTTATCTCTTCTCT+TGG | 0.351542 | 2_2:+7101680 | None:intergenic |
| CTGTTCTTGATCTTTCTTTG+AGG | 0.356529 | 2_2:+7101061 | None:intergenic |
| ACAGAAGCAGTTGGAGAATT+AGG | 0.358074 | 2_2:+7101359 | None:intergenic |
| TTTGAGGCTGAAAATATGTT+TGG | 0.371353 | 2_2:+7101327 | None:intergenic |
| TTCCACCTTGGCTTTGGCTC+AGG | 0.373630 | 2_2:+7101764 | None:intergenic |
| TTCCTTATCTCTTCTCTTGG+TGG | 0.377528 | 2_2:+7101683 | None:intergenic |
| AAATTTGAGGAAGTGAATTA+GGG | 0.386654 | 2_2:+7101492 | None:intergenic |
| CATCAATGATGTGGCCTTTG+AGG | 0.391103 | 2_2:-7100260 | Msa0234360:CDS |
| CCTTGCACTTGAGAAATGAT+AGG | 0.417012 | 2_2:+7100918 | None:intergenic |
| GTAGGATGTAAAACAGTAGT+AGG | 0.421080 | 2_2:+7100969 | None:intergenic |
| CCAGAATCAGAATCAGAATC+AGG | 0.428113 | 2_2:-7101534 | Msa0234360:CDS |
| TATGCTTGCTTCTTGATTTG+CGG | 0.428894 | 2_2:+7101594 | None:intergenic |
| GGGTTATTATTATTCAATAG+AGG | 0.442248 | 2_2:-7099870 | Msa0234360:CDS |
| GCACAACATCATTGATGTTA+GGG | 0.443675 | 2_2:+7101381 | None:intergenic |
| AGAGCACAGTTGCAAGAGTA+TGG | 0.448490 | 2_2:-7101656 | Msa0234360:CDS |
| TAGTGCAATTACCAGTGTTA+TGG | 0.456754 | 2_2:+7101129 | None:intergenic |
| GGCTTAGACTTAAACATGCT+TGG | 0.459758 | 2_2:+7102041 | None:intergenic |
| TTACTTGTGGTGGTGGAAGA+AGG | 0.462598 | 2_2:+7101294 | None:intergenic |
| TTCTTCCCAGTGCAACATCA+TGG | 0.463536 | 2_2:-7101248 | Msa0234360:CDS |
| CTCAAAGAAAGATCAAGAAC+AGG | 0.467360 | 2_2:-7101060 | Msa0234360:CDS |
| AGATAATTACCTGAGGAGTA+AGG | 0.470017 | 2_2:+7101948 | None:intergenic |
| ATCTCAGGCATTGGTGAACC+AGG | 0.475607 | 2_2:-7100307 | Msa0234360:intron |
| GCTGTTCTTGTACATCAAAC+TGG | 0.484452 | 2_2:-7100193 | Msa0234360:CDS |
| GAAAATAACATGCACCATGC+TGG | 0.488247 | 2_2:+7100125 | None:intergenic |
| CCTAACAATGTTACATCACA+AGG | 0.488908 | 2_2:-7101209 | Msa0234360:CDS |
| CCAAGGGAAAATACTTTGGC+AGG | 0.496441 | 2_2:+7101407 | None:intergenic |
| CCTTGTCCATGATGTTGCAC+TGG | 0.500743 | 2_2:+7101242 | None:intergenic |
| GAAACCAAGGGAAAATACTT+TGG | 0.514758 | 2_2:+7101403 | None:intergenic |
| GATAATTACCTGAGGAGTAA+GGG | 0.515469 | 2_2:+7101949 | None:intergenic |
| CACAGAACCCCTTACTCCTC+AGG | 0.516334 | 2_2:-7101957 | Msa0234360:intron |
| AGTGAAGAGTGACACCATAC+TGG | 0.516391 | 2_2:+7100152 | None:intergenic |
| TGTTCATGATCTCACTAAGC+AGG | 0.516785 | 2_2:+7101099 | None:intergenic |
| GTGATGGTGGAGGAAGTAGT+AGG | 0.517817 | 2_2:+7100951 | None:intergenic |
| GGTGAAGAGGCTATATAAGA+AGG | 0.523036 | 2_2:-7102211 | None:intergenic |
| TAATGTTCGTGCGGCATTTG+GGG | 0.529446 | 2_2:-7100221 | Msa0234360:CDS |
| AAGAAGAAAGTCTCAGTAGC+TGG | 0.533457 | 2_2:+7101266 | None:intergenic |
| GGTACAGTAGCAGAAATTTG+AGG | 0.535619 | 2_2:+7101479 | None:intergenic |
| GGTGCAGTTACTTGTGGTGG+TGG | 0.536505 | 2_2:+7101287 | None:intergenic |
| ATCCACCAAGAGAAGAGATA+AGG | 0.537259 | 2_2:-7101685 | Msa0234360:CDS |
| TTGCAAGAGTATGGTCAAGT+TGG | 0.545746 | 2_2:-7101647 | Msa0234360:CDS |
| TACTTGTGGTGGTGGAAGAA+GGG | 0.555078 | 2_2:+7101295 | None:intergenic |
| AGCTATCTTCAATTCTGGAA+TGG | 0.556620 | 2_2:-7101711 | Msa0234360:CDS |
| GCAAACAGATGTTCAGATGT+GGG | 0.556845 | 2_2:+7101006 | None:intergenic |
| GAGGAAGATGAAGAAGATGA+AGG | 0.560821 | 2_2:+7101458 | None:intergenic |
| CCTGTGTTAACAAACCAGTA+TGG | 0.574262 | 2_2:-7100166 | Msa0234360:CDS |
| AGGTGATTGAACAGTGATGG+TGG | 0.575194 | 2_2:+7100938 | None:intergenic |
| GGCAAACAGATGTTCAGATG+TGG | 0.578783 | 2_2:+7101005 | None:intergenic |
| AACAGTAGTAGGAGTTGTGG+CGG | 0.580421 | 2_2:+7100980 | None:intergenic |
| CTTGTCCATGATGTTGCACT+GGG | 0.582831 | 2_2:+7101243 | None:intergenic |
| CATTGATGTTAGGGAAACCA+AGG | 0.582855 | 2_2:+7101390 | None:intergenic |
| ACTCTTCACTCACTCCAGCA+TGG | 0.587267 | 2_2:-7100139 | Msa0234360:CDS |
| CATTGGTGATGAGTGTTGCA+GGG | 0.588949 | 2_2:+7102020 | None:intergenic |
| GTAGCTGGTGCAGTTACTTG+TGG | 0.590783 | 2_2:+7101281 | None:intergenic |
| AGTTGATGTCATGCTGCCAT+TGG | 0.593818 | 2_2:+7102003 | None:intergenic |
| GAAGTCCTGAGCCAAAGCCA+AGG | 0.598879 | 2_2:-7101769 | Msa0234360:CDS |
| AAACAGATGTTCAGATGTGG+GGG | 0.599793 | 2_2:+7101008 | None:intergenic |
| CCTATCATTTCTCAAGTGCA+AGG | 0.604894 | 2_2:-7100918 | Msa0234360:intron |
| TGAAGATAGCTTCAAGTATG+CGG | 0.609197 | 2_2:+7101723 | None:intergenic |
| ATAATTACCTGAGGAGTAAG+GGG | 0.610710 | 2_2:+7101950 | None:intergenic |
| TGCTGACCATGTGATTGAGC+AGG | 0.611105 | 2_2:+7101155 | None:intergenic |
| CAAACAGATGTTCAGATGTG+GGG | 0.614296 | 2_2:+7101007 | None:intergenic |
| TAAAACAGTAGTAGGAGTTG+TGG | 0.614312 | 2_2:+7100977 | None:intergenic |
| CCATACTGGTTTGTTAACAC+AGG | 0.617631 | 2_2:+7100166 | None:intergenic |
| GCTGGTGCAGTTACTTGTGG+TGG | 0.617972 | 2_2:+7101284 | None:intergenic |
| AGGTCCAGAAGCAACCTCAA+AGG | 0.623758 | 2_2:+7100246 | None:intergenic |
| ATGGTTCCTGCTCAATCACA+TGG | 0.625439 | 2_2:-7101161 | Msa0234360:CDS |
| GTAGTAGGAGTTGTGGCGGG+TGG | 0.627094 | 2_2:+7100984 | None:intergenic |
| TGGCTTCATCAAATAGACAC+TGG | 0.631121 | 2_2:-7102064 | Msa0234360:CDS |
| CCAGTGCAACATCATGGACA+AGG | 0.635853 | 2_2:-7101242 | Msa0234360:CDS |
| GATAGGTGATTGAACAGTGA+TGG | 0.637240 | 2_2:+7100935 | None:intergenic |
| ACAGTAGTAGGAGTTGTGGC+GGG | 0.646909 | 2_2:+7100981 | None:intergenic |
| GTCCTGAGCCAAAGCCAAGG+TGG | 0.648407 | 2_2:-7101766 | Msa0234360:CDS |
| CCTGCAACACTCATCACCAA+TGG | 0.655110 | 2_2:-7102019 | Msa0234360:CDS |
| TGATTGAGCAGGAACCATGT+TGG | 0.662612 | 2_2:+7101166 | None:intergenic |
| ATTGATGTTAGGGAAACCAA+GGG | 0.665295 | 2_2:+7101391 | None:intergenic |
| CTAACAATGTTACATCACAA+GGG | 0.668058 | 2_2:-7101208 | Msa0234360:CDS |
| GGTCAGCAACACCATAACAC+TGG | 0.670176 | 2_2:-7101140 | Msa0234360:CDS |
| AGTGAGATCATGAACAACCA+TGG | 0.690840 | 2_2:-7101092 | Msa0234360:CDS |
| AGTGGTGTTCATCAATGATG+TGG | 0.696660 | 2_2:-7100269 | Msa0234360:CDS |
| TCTTTGAGGAATTAACACCA+TGG | 0.698293 | 2_2:+7101075 | None:intergenic |
| TGATTGAACAGTGATGGTGG+AGG | 0.713068 | 2_2:+7100941 | None:intergenic |
| AACAGATGTTCAGATGTGGG+GGG | 0.713218 | 2_2:+7101009 | None:intergenic |
| AGGTGTTGCTGCAAAATCAG+TGG | 0.717993 | 2_2:-7100287 | Msa0234360:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAAAGAAACTAAATAATTT+GGG | + | chr2_2:7101174-7101193 | None:intergenic | 10.0% |
| !! | TTAAAGAAACTAAATAATTT+GGG | + | chr2_2:7101174-7101193 | None:intergenic | 10.0% |
| !! | ATTTATCATCATCATAATTA+TGG | - | chr2_2:7099890-7099909 | Msa0234360:intron | 15.0% |
| !! | TAAAGAAACTAAATAATTTG+GGG | + | chr2_2:7101173-7101192 | None:intergenic | 15.0% |
| !! | GTTAAAGAAACTAAATAATT+TGG | + | chr2_2:7101175-7101194 | None:intergenic | 15.0% |
| !! | AAGTATATAGATGAAATAAT+AGG | + | chr2_2:7101398-7101417 | None:intergenic | 15.0% |
| !! | TATGAAAAATAAATTAGAGA+AGG | + | chr2_2:7101935-7101954 | None:intergenic | 15.0% |
| !! | ATTTATCATCATCATAATTA+TGG | - | chr2_2:7099890-7099909 | Msa0234360:intron | 15.0% |
| !! | TAAAGAAACTAAATAATTTG+GGG | + | chr2_2:7101173-7101192 | None:intergenic | 15.0% |
| !! | GTTAAAGAAACTAAATAATT+TGG | + | chr2_2:7101175-7101194 | None:intergenic | 15.0% |
| !! | AAGTATATAGATGAAATAAT+AGG | + | chr2_2:7101398-7101417 | None:intergenic | 15.0% |
| !! | TATGAAAAATAAATTAGAGA+AGG | + | chr2_2:7101935-7101954 | None:intergenic | 15.0% |
| !! | TTGTTACAAATTAGACATTA+GGG | + | chr2_2:7100132-7100151 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTCTTCTTCTTTG+TGG | - | chr2_2:7100164-7100183 | Msa0234360:CDS | 20.0% |
| !! | AATTTAGAGATGAAAATATG+TGG | + | chr2_2:7101207-7101226 | None:intergenic | 20.0% |
| !!! | CATAGTTTTTGAGATAAAAA+TGG | - | chr2_2:7101450-7101469 | Msa0234360:CDS | 20.0% |
| !!! | TAAAAATGGTAATGTATGTA+TGG | - | chr2_2:7101464-7101483 | Msa0234360:CDS | 20.0% |
| !!! | TTTAGTATTAGTTTGACTTT+TGG | - | chr2_2:7101591-7101610 | Msa0234360:CDS | 20.0% |
| !!! | TTAATGTATGGTGTTTTATT+TGG | - | chr2_2:7102005-7102024 | Msa0234360:CDS | 20.0% |
| !! | TTGTTACAAATTAGACATTA+GGG | + | chr2_2:7100132-7100151 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTCTTCTTCTTTG+TGG | - | chr2_2:7100164-7100183 | Msa0234360:CDS | 20.0% |
| !! | AATTTAGAGATGAAAATATG+TGG | + | chr2_2:7101207-7101226 | None:intergenic | 20.0% |
| !!! | CATAGTTTTTGAGATAAAAA+TGG | - | chr2_2:7101450-7101469 | Msa0234360:CDS | 20.0% |
| !!! | TAAAAATGGTAATGTATGTA+TGG | - | chr2_2:7101464-7101483 | Msa0234360:CDS | 20.0% |
| !!! | TTTAGTATTAGTTTGACTTT+TGG | - | chr2_2:7101591-7101610 | Msa0234360:CDS | 20.0% |
| !!! | TTAATGTATGGTGTTTTATT+TGG | - | chr2_2:7102005-7102024 | Msa0234360:CDS | 20.0% |
| ! | AAAATGTAGATAATTACCTG+AGG | + | chr2_2:7100036-7100055 | None:intergenic | 25.0% |
| ! | CTTGTTACAAATTAGACATT+AGG | + | chr2_2:7100133-7100152 | None:intergenic | 25.0% |
| ! | AAATTTGAGGAAGTGAATTA+GGG | + | chr2_2:7100485-7100504 | None:intergenic | 25.0% |
| ! | ATCTCAAAAACTATGTTCTT+AGG | + | chr2_2:7101445-7101464 | None:intergenic | 25.0% |
| !!! | ATATTTTGTTTTGCAGATGT+AGG | - | chr2_2:7101954-7101973 | Msa0234360:intron | 25.0% |
| !!! | TATTTTGTTTTGCAGATGTA+GGG | - | chr2_2:7101955-7101974 | Msa0234360:intron | 25.0% |
| !!! | TACTATTGTGTTTGCTATTA+GGG | - | chr2_2:7102084-7102103 | Msa0234360:exon | 25.0% |
| ! | GGGTTATTATTATTCAATAG+AGG | - | chr2_2:7102104-7102123 | Msa0234360:five_prime_UTR | 25.0% |
| ! | AAAATGTAGATAATTACCTG+AGG | + | chr2_2:7100036-7100055 | None:intergenic | 25.0% |
| ! | CTTGTTACAAATTAGACATT+AGG | + | chr2_2:7100133-7100152 | None:intergenic | 25.0% |
| ! | AAATTTGAGGAAGTGAATTA+GGG | + | chr2_2:7100485-7100504 | None:intergenic | 25.0% |
| ! | ATCTCAAAAACTATGTTCTT+AGG | + | chr2_2:7101445-7101464 | None:intergenic | 25.0% |
| !!! | ATATTTTGTTTTGCAGATGT+AGG | - | chr2_2:7101954-7101973 | Msa0234360:intron | 25.0% |
| !!! | TATTTTGTTTTGCAGATGTA+GGG | - | chr2_2:7101955-7101974 | Msa0234360:intron | 25.0% |
| !!! | TACTATTGTGTTTGCTATTA+GGG | - | chr2_2:7102084-7102103 | Msa0234360:exon | 25.0% |
| ! | GGGTTATTATTATTCAATAG+AGG | - | chr2_2:7102104-7102123 | Msa0234360:five_prime_UTR | 25.0% |
| !! | GCTATATAAGAAGGTTTTGT+TGG | - | chr2_2:7099772-7099791 | Msa0234360:CDS | 30.0% |
| TTCTTCTTCTTTGTGGAAAT+AGG | - | chr2_2:7100171-7100190 | Msa0234360:CDS | 30.0% | |
| ! | GTGATGCTAATGTTTTCTAT+TGG | - | chr2_2:7100349-7100368 | Msa0234360:intron | 30.0% |
| GAAATTTGAGGAAGTGAATT+AGG | + | chr2_2:7100486-7100505 | None:intergenic | 30.0% | |
| ! | TTGGCAGGTATTAATTCTTT+TGG | + | chr2_2:7100555-7100574 | None:intergenic | 30.0% |
| !! | GCTGAAAATATGTTTGGTTT+TGG | + | chr2_2:7100644-7100663 | None:intergenic | 30.0% |
| ! | TTTGAGGCTGAAAATATGTT+TGG | + | chr2_2:7100650-7100669 | None:intergenic | 30.0% |
| CTAACAATGTTACATCACAA+GGG | - | chr2_2:7100766-7100785 | Msa0234360:intron | 30.0% | |
| ATAAACTAGTCAAGATCTTG+TGG | + | chr2_2:7101350-7101369 | None:intergenic | 30.0% | |
| ACTATGTTCTTAGGTTCTAT+AGG | + | chr2_2:7101436-7101455 | None:intergenic | 30.0% | |
| TATGGAAAAGAAGAGAAAGT+GGG | - | chr2_2:7101482-7101501 | Msa0234360:CDS | 30.0% | |
| AGATTAATGTGAATAAGACG+TGG | - | chr2_2:7101510-7101529 | Msa0234360:CDS | 30.0% | |
| !! | ACTTTTGGTAGCTATAGTTA+AGG | - | chr2_2:7101606-7101625 | Msa0234360:CDS | 30.0% |
| !!! | ATTTTGTTTTGCAGATGTAG+GGG | - | chr2_2:7101956-7101975 | Msa0234360:intron | 30.0% |
| !! | AGTGATGAGGTTTTAATGTA+TGG | - | chr2_2:7101993-7102012 | Msa0234360:CDS | 30.0% |
| !! | GTACTATTGTGTTTGCTATT+AGG | - | chr2_2:7102083-7102102 | Msa0234360:exon | 30.0% |
| !! | GCTATATAAGAAGGTTTTGT+TGG | - | chr2_2:7099772-7099791 | Msa0234360:CDS | 30.0% |
| TTCTTCTTCTTTGTGGAAAT+AGG | - | chr2_2:7100171-7100190 | Msa0234360:CDS | 30.0% | |
| ! | GTGATGCTAATGTTTTCTAT+TGG | - | chr2_2:7100349-7100368 | Msa0234360:intron | 30.0% |
| GAAATTTGAGGAAGTGAATT+AGG | + | chr2_2:7100486-7100505 | None:intergenic | 30.0% | |
| ! | TTGGCAGGTATTAATTCTTT+TGG | + | chr2_2:7100555-7100574 | None:intergenic | 30.0% |
| !! | GCTGAAAATATGTTTGGTTT+TGG | + | chr2_2:7100644-7100663 | None:intergenic | 30.0% |
| ! | TTTGAGGCTGAAAATATGTT+TGG | + | chr2_2:7100650-7100669 | None:intergenic | 30.0% |
| CTAACAATGTTACATCACAA+GGG | - | chr2_2:7100766-7100785 | Msa0234360:intron | 30.0% | |
| ATAAACTAGTCAAGATCTTG+TGG | + | chr2_2:7101350-7101369 | None:intergenic | 30.0% | |
| ACTATGTTCTTAGGTTCTAT+AGG | + | chr2_2:7101436-7101455 | None:intergenic | 30.0% | |
| TATGGAAAAGAAGAGAAAGT+GGG | - | chr2_2:7101482-7101501 | Msa0234360:CDS | 30.0% | |
| AGATTAATGTGAATAAGACG+TGG | - | chr2_2:7101510-7101529 | Msa0234360:CDS | 30.0% | |
| !! | ACTTTTGGTAGCTATAGTTA+AGG | - | chr2_2:7101606-7101625 | Msa0234360:CDS | 30.0% |
| !!! | ATTTTGTTTTGCAGATGTAG+GGG | - | chr2_2:7101956-7101975 | Msa0234360:intron | 30.0% |
| !! | AGTGATGAGGTTTTAATGTA+TGG | - | chr2_2:7101993-7102012 | Msa0234360:CDS | 30.0% |
| !! | GTACTATTGTGTTTGCTATT+AGG | - | chr2_2:7102083-7102102 | Msa0234360:exon | 30.0% |
| ATAATTACCTGAGGAGTAAG+GGG | + | chr2_2:7100027-7100046 | None:intergenic | 35.0% | |
| GATAATTACCTGAGGAGTAA+GGG | + | chr2_2:7100028-7100047 | None:intergenic | 35.0% | |
| AGATAATTACCTGAGGAGTA+AGG | + | chr2_2:7100029-7100048 | None:intergenic | 35.0% | |
| TGAAGATAGCTTCAAGTATG+CGG | + | chr2_2:7100254-7100273 | None:intergenic | 35.0% | |
| CTTGAAGCTATCTTCAATTC+TGG | - | chr2_2:7100258-7100277 | Msa0234360:CDS | 35.0% | |
| ! | AGCTATCTTCAATTCTGGAA+TGG | - | chr2_2:7100263-7100282 | Msa0234360:CDS | 35.0% |
| ATCTTCCTTATCTCTTCTCT+TGG | + | chr2_2:7100297-7100316 | None:intergenic | 35.0% | |
| ! | TATGCTTGCTTCTTGATTTG+CGG | + | chr2_2:7100383-7100402 | None:intergenic | 35.0% |
| !!! | TCTGATTCTTGTTCTGGTTT+TGG | + | chr2_2:7100419-7100438 | None:intergenic | 35.0% |
| !!! | AGTGAATTAGGGTTTTGTTG+TGG | + | chr2_2:7100474-7100493 | None:intergenic | 35.0% |
| ! | GCAGGTATTAATTCTTTTGG+TGG | + | chr2_2:7100552-7100571 | None:intergenic | 35.0% |
| GAAACCAAGGGAAAATACTT+TGG | + | chr2_2:7100574-7100593 | None:intergenic | 35.0% | |
| ATTGATGTTAGGGAAACCAA+GGG | + | chr2_2:7100586-7100605 | None:intergenic | 35.0% | |
| GCACAACATCATTGATGTTA+GGG | + | chr2_2:7100596-7100615 | None:intergenic | 35.0% | |
| ! | AGAAGGGTAGTTACATTTTG+AGG | + | chr2_2:7100666-7100685 | None:intergenic | 35.0% |
| CCTTGTGATGTAACATTGTT+AGG | + | chr2_2:7100768-7100787 | None:intergenic | 35.0% | |
| CCTAACAATGTTACATCACA+AGG | - | chr2_2:7100765-7100784 | Msa0234360:intron | 35.0% | |
| ! | CTTTTCTGAACTTTCCAACA+TGG | - | chr2_2:7100794-7100813 | Msa0234360:intron | 35.0% |
| TAGTGCAATTACCAGTGTTA+TGG | + | chr2_2:7100848-7100867 | None:intergenic | 35.0% | |
| ! | TCTTTGAGGAATTAACACCA+TGG | + | chr2_2:7100902-7100921 | None:intergenic | 35.0% |
| CTGTTCTTGATCTTTCTTTG+AGG | + | chr2_2:7100916-7100935 | None:intergenic | 35.0% | |
| CTCAAAGAAAGATCAAGAAC+AGG | - | chr2_2:7100914-7100933 | Msa0234360:intron | 35.0% | |
| TAAAACAGTAGTAGGAGTTG+TGG | + | chr2_2:7101000-7101019 | None:intergenic | 35.0% | |
| GTAGGATGTAAAACAGTAGT+AGG | + | chr2_2:7101008-7101027 | None:intergenic | 35.0% | |
| ATGTTCTTAGGTTCTATAGG+CGG | + | chr2_2:7101433-7101452 | None:intergenic | 35.0% | |
| GTATGGAAAAGAAGAGAAAG+TGG | - | chr2_2:7101481-7101500 | Msa0234360:CDS | 35.0% | |
| ! | GTTAGTGTACCATGGTTTTT+GGG | - | chr2_2:7101532-7101551 | Msa0234360:CDS | 35.0% |
| !! | GGCTCTATTGGCTTAAATAT+AGG | - | chr2_2:7101567-7101586 | Msa0234360:CDS | 35.0% |
| GAAATGATTGAGTGTATCTC+AGG | - | chr2_2:7101652-7101671 | Msa0234360:CDS | 35.0% | |
| !! | ATCTGTGCTGTTCTAAAGTA+TGG | - | chr2_2:7102165-7102184 | Msa0234360:five_prime_UTR | 35.0% |
| ATAATTACCTGAGGAGTAAG+GGG | + | chr2_2:7100027-7100046 | None:intergenic | 35.0% | |
| GATAATTACCTGAGGAGTAA+GGG | + | chr2_2:7100028-7100047 | None:intergenic | 35.0% | |
| AGATAATTACCTGAGGAGTA+AGG | + | chr2_2:7100029-7100048 | None:intergenic | 35.0% | |
| TGAAGATAGCTTCAAGTATG+CGG | + | chr2_2:7100254-7100273 | None:intergenic | 35.0% | |
| CTTGAAGCTATCTTCAATTC+TGG | - | chr2_2:7100258-7100277 | Msa0234360:CDS | 35.0% | |
| ! | AGCTATCTTCAATTCTGGAA+TGG | - | chr2_2:7100263-7100282 | Msa0234360:CDS | 35.0% |
| ATCTTCCTTATCTCTTCTCT+TGG | + | chr2_2:7100297-7100316 | None:intergenic | 35.0% | |
| ! | TATGCTTGCTTCTTGATTTG+CGG | + | chr2_2:7100383-7100402 | None:intergenic | 35.0% |
| !!! | TCTGATTCTTGTTCTGGTTT+TGG | + | chr2_2:7100419-7100438 | None:intergenic | 35.0% |
| !!! | AGTGAATTAGGGTTTTGTTG+TGG | + | chr2_2:7100474-7100493 | None:intergenic | 35.0% |
| ! | GCAGGTATTAATTCTTTTGG+TGG | + | chr2_2:7100552-7100571 | None:intergenic | 35.0% |
| GAAACCAAGGGAAAATACTT+TGG | + | chr2_2:7100574-7100593 | None:intergenic | 35.0% | |
| ATTGATGTTAGGGAAACCAA+GGG | + | chr2_2:7100586-7100605 | None:intergenic | 35.0% | |
| GCACAACATCATTGATGTTA+GGG | + | chr2_2:7100596-7100615 | None:intergenic | 35.0% | |
| ! | AGAAGGGTAGTTACATTTTG+AGG | + | chr2_2:7100666-7100685 | None:intergenic | 35.0% |
| CCTTGTGATGTAACATTGTT+AGG | + | chr2_2:7100768-7100787 | None:intergenic | 35.0% | |
| CCTAACAATGTTACATCACA+AGG | - | chr2_2:7100765-7100784 | Msa0234360:intron | 35.0% | |
| ! | CTTTTCTGAACTTTCCAACA+TGG | - | chr2_2:7100794-7100813 | Msa0234360:intron | 35.0% |
| TAGTGCAATTACCAGTGTTA+TGG | + | chr2_2:7100848-7100867 | None:intergenic | 35.0% | |
| ! | TCTTTGAGGAATTAACACCA+TGG | + | chr2_2:7100902-7100921 | None:intergenic | 35.0% |
| CTGTTCTTGATCTTTCTTTG+AGG | + | chr2_2:7100916-7100935 | None:intergenic | 35.0% | |
| CTCAAAGAAAGATCAAGAAC+AGG | - | chr2_2:7100914-7100933 | Msa0234360:intron | 35.0% | |
| TAAAACAGTAGTAGGAGTTG+TGG | + | chr2_2:7101000-7101019 | None:intergenic | 35.0% | |
| GTAGGATGTAAAACAGTAGT+AGG | + | chr2_2:7101008-7101027 | None:intergenic | 35.0% | |
| ATGTTCTTAGGTTCTATAGG+CGG | + | chr2_2:7101433-7101452 | None:intergenic | 35.0% | |
| GTATGGAAAAGAAGAGAAAG+TGG | - | chr2_2:7101481-7101500 | Msa0234360:CDS | 35.0% | |
| ! | GTTAGTGTACCATGGTTTTT+GGG | - | chr2_2:7101532-7101551 | Msa0234360:CDS | 35.0% |
| !! | GGCTCTATTGGCTTAAATAT+AGG | - | chr2_2:7101567-7101586 | Msa0234360:CDS | 35.0% |
| GAAATGATTGAGTGTATCTC+AGG | - | chr2_2:7101652-7101671 | Msa0234360:CDS | 35.0% | |
| !! | ATCTGTGCTGTTCTAAAGTA+TGG | - | chr2_2:7102165-7102184 | Msa0234360:five_prime_UTR | 35.0% |
| !!! | AGAAGGTTTTGTTGGTTCTG+TGG | - | chr2_2:7099780-7099799 | Msa0234360:CDS | 40.0% |
| !!! | GAAGGTTTTGTTGGTTCTGT+GGG | - | chr2_2:7099781-7099800 | Msa0234360:CDS | 40.0% |
| TGGCTTCATCAAATAGACAC+TGG | - | chr2_2:7099910-7099929 | Msa0234360:intron | 40.0% | |
| GGCTTAGACTTAAACATGCT+TGG | + | chr2_2:7099936-7099955 | None:intergenic | 40.0% | |
| !!! | ATGCGGATTTGTTCTGGTTT+TGG | + | chr2_2:7100237-7100256 | None:intergenic | 40.0% |
| ! | TCAAGTATGCGGATTTGTTC+TGG | + | chr2_2:7100243-7100262 | None:intergenic | 40.0% |
| ATCCACCAAGAGAAGAGATA+AGG | - | chr2_2:7100289-7100308 | Msa0234360:CDS | 40.0% | |
| TTCCTTATCTCTTCTCTTGG+TGG | + | chr2_2:7100294-7100313 | None:intergenic | 40.0% | |
| ! | TTGCAAGAGTATGGTCAAGT+TGG | - | chr2_2:7100327-7100346 | Msa0234360:intron | 40.0% |
| !!! | TGCTTCTTGATTTGCGGTTT+TGG | + | chr2_2:7100377-7100396 | None:intergenic | 40.0% |
| !!! | TCTTGTTCTGGTTTTGGAGA+TGG | + | chr2_2:7100413-7100432 | None:intergenic | 40.0% |
| !! | TCTGGTTCTGATTCTTGTTC+TGG | + | chr2_2:7100425-7100444 | None:intergenic | 40.0% |
| CCTGATTCTGATTCTGATTC+TGG | + | chr2_2:7100443-7100462 | None:intergenic | 40.0% | |
| CCAGAATCAGAATCAGAATC+AGG | - | chr2_2:7100440-7100459 | Msa0234360:intron | 40.0% | |
| GGTACAGTAGCAGAAATTTG+AGG | + | chr2_2:7100498-7100517 | None:intergenic | 40.0% | |
| GAGGAAGATGAAGAAGATGA+AGG | + | chr2_2:7100519-7100538 | None:intergenic | 40.0% | |
| ! | TTTTGGTGGAGATTTCTCAG+AGG | + | chr2_2:7100538-7100557 | None:intergenic | 40.0% |
| CATTGATGTTAGGGAAACCA+AGG | + | chr2_2:7100587-7100606 | None:intergenic | 40.0% | |
| GGCACAACATCATTGATGTT+AGG | + | chr2_2:7100597-7100616 | None:intergenic | 40.0% | |
| ACAGAAGCAGTTGGAGAATT+AGG | + | chr2_2:7100618-7100637 | None:intergenic | 40.0% | |
| !!! | TTTTGGTTCACAGAAGCAGT+TGG | + | chr2_2:7100627-7100646 | None:intergenic | 40.0% |
| AAGAAGAAAGTCTCAGTAGC+TGG | + | chr2_2:7100711-7100730 | None:intergenic | 40.0% | |
| TGTTCATGATCTCACTAAGC+AGG | + | chr2_2:7100878-7100897 | None:intergenic | 40.0% | |
| AGTGAGATCATGAACAACCA+TGG | - | chr2_2:7100882-7100901 | Msa0234360:intron | 40.0% | |
| AAACAGATGTTCAGATGTGG+GGG | + | chr2_2:7100969-7100988 | None:intergenic | 40.0% | |
| CAAACAGATGTTCAGATGTG+GGG | + | chr2_2:7100970-7100989 | None:intergenic | 40.0% | |
| GCAAACAGATGTTCAGATGT+GGG | + | chr2_2:7100971-7100990 | None:intergenic | 40.0% | |
| GATAGGTGATTGAACAGTGA+TGG | + | chr2_2:7101042-7101061 | None:intergenic | 40.0% | |
| CCTTGCACTTGAGAAATGAT+AGG | + | chr2_2:7101059-7101078 | None:intergenic | 40.0% | |
| CCTATCATTTCTCAAGTGCA+AGG | - | chr2_2:7101056-7101075 | Msa0234360:CDS | 40.0% | |
| ! | GGTTAGTGTACCATGGTTTT+TGG | - | chr2_2:7101531-7101550 | Msa0234360:CDS | 40.0% |
| ATTGAGTGTATCTCAGGCAT+TGG | - | chr2_2:7101658-7101677 | Msa0234360:CDS | 40.0% | |
| AGTGGTGTTCATCAATGATG+TGG | - | chr2_2:7101705-7101724 | Msa0234360:CDS | 40.0% | |
| ! | TGGACCTTTTAATGTTCGTG+CGG | - | chr2_2:7101744-7101763 | Msa0234360:CDS | 40.0% |
| AATGCCGCACGAACATTAAA+AGG | + | chr2_2:7101751-7101770 | None:intergenic | 40.0% | |
| TTTAATGTTCGTGCGGCATT+TGG | - | chr2_2:7101751-7101770 | Msa0234360:CDS | 40.0% | |
| TTAATGTTCGTGCGGCATTT+GGG | - | chr2_2:7101752-7101771 | Msa0234360:CDS | 40.0% | |
| GCTGTTCTTGTACATCAAAC+TGG | - | chr2_2:7101781-7101800 | Msa0234360:CDS | 40.0% | |
| !! | CCATACTGGTTTGTTAACAC+AGG | + | chr2_2:7101811-7101830 | None:intergenic | 40.0% |
| CCTGTGTTAACAAACCAGTA+TGG | - | chr2_2:7101808-7101827 | Msa0234360:intron | 40.0% | |
| GAAAATAACATGCACCATGC+TGG | + | chr2_2:7101852-7101871 | None:intergenic | 40.0% | |
| AGATGTAGGGGAAAAAATGC+TGG | - | chr2_2:7101968-7101987 | Msa0234360:CDS | 40.0% | |
| AAAAATGCTGGAGAGTGATG+AGG | - | chr2_2:7101980-7101999 | Msa0234360:CDS | 40.0% | |
| !!! | AGAAGGTTTTGTTGGTTCTG+TGG | - | chr2_2:7099780-7099799 | Msa0234360:CDS | 40.0% |
| !!! | GAAGGTTTTGTTGGTTCTGT+GGG | - | chr2_2:7099781-7099800 | Msa0234360:CDS | 40.0% |
| TGGCTTCATCAAATAGACAC+TGG | - | chr2_2:7099910-7099929 | Msa0234360:intron | 40.0% | |
| GGCTTAGACTTAAACATGCT+TGG | + | chr2_2:7099936-7099955 | None:intergenic | 40.0% | |
| !!! | ATGCGGATTTGTTCTGGTTT+TGG | + | chr2_2:7100237-7100256 | None:intergenic | 40.0% |
| ! | TCAAGTATGCGGATTTGTTC+TGG | + | chr2_2:7100243-7100262 | None:intergenic | 40.0% |
| ATCCACCAAGAGAAGAGATA+AGG | - | chr2_2:7100289-7100308 | Msa0234360:CDS | 40.0% | |
| TTCCTTATCTCTTCTCTTGG+TGG | + | chr2_2:7100294-7100313 | None:intergenic | 40.0% | |
| ! | TTGCAAGAGTATGGTCAAGT+TGG | - | chr2_2:7100327-7100346 | Msa0234360:intron | 40.0% |
| !!! | TGCTTCTTGATTTGCGGTTT+TGG | + | chr2_2:7100377-7100396 | None:intergenic | 40.0% |
| !!! | TCTTGTTCTGGTTTTGGAGA+TGG | + | chr2_2:7100413-7100432 | None:intergenic | 40.0% |
| !! | TCTGGTTCTGATTCTTGTTC+TGG | + | chr2_2:7100425-7100444 | None:intergenic | 40.0% |
| CCTGATTCTGATTCTGATTC+TGG | + | chr2_2:7100443-7100462 | None:intergenic | 40.0% | |
| CCAGAATCAGAATCAGAATC+AGG | - | chr2_2:7100440-7100459 | Msa0234360:intron | 40.0% | |
| GGTACAGTAGCAGAAATTTG+AGG | + | chr2_2:7100498-7100517 | None:intergenic | 40.0% | |
| GAGGAAGATGAAGAAGATGA+AGG | + | chr2_2:7100519-7100538 | None:intergenic | 40.0% | |
| ! | TTTTGGTGGAGATTTCTCAG+AGG | + | chr2_2:7100538-7100557 | None:intergenic | 40.0% |
| CATTGATGTTAGGGAAACCA+AGG | + | chr2_2:7100587-7100606 | None:intergenic | 40.0% | |
| GGCACAACATCATTGATGTT+AGG | + | chr2_2:7100597-7100616 | None:intergenic | 40.0% | |
| ACAGAAGCAGTTGGAGAATT+AGG | + | chr2_2:7100618-7100637 | None:intergenic | 40.0% | |
| !!! | TTTTGGTTCACAGAAGCAGT+TGG | + | chr2_2:7100627-7100646 | None:intergenic | 40.0% |
| AAGAAGAAAGTCTCAGTAGC+TGG | + | chr2_2:7100711-7100730 | None:intergenic | 40.0% | |
| TGTTCATGATCTCACTAAGC+AGG | + | chr2_2:7100878-7100897 | None:intergenic | 40.0% | |
| AGTGAGATCATGAACAACCA+TGG | - | chr2_2:7100882-7100901 | Msa0234360:intron | 40.0% | |
| AAACAGATGTTCAGATGTGG+GGG | + | chr2_2:7100969-7100988 | None:intergenic | 40.0% | |
| CAAACAGATGTTCAGATGTG+GGG | + | chr2_2:7100970-7100989 | None:intergenic | 40.0% | |
| GCAAACAGATGTTCAGATGT+GGG | + | chr2_2:7100971-7100990 | None:intergenic | 40.0% | |
| GATAGGTGATTGAACAGTGA+TGG | + | chr2_2:7101042-7101061 | None:intergenic | 40.0% | |
| CCTTGCACTTGAGAAATGAT+AGG | + | chr2_2:7101059-7101078 | None:intergenic | 40.0% | |
| CCTATCATTTCTCAAGTGCA+AGG | - | chr2_2:7101056-7101075 | Msa0234360:CDS | 40.0% | |
| ! | GGTTAGTGTACCATGGTTTT+TGG | - | chr2_2:7101531-7101550 | Msa0234360:CDS | 40.0% |
| ATTGAGTGTATCTCAGGCAT+TGG | - | chr2_2:7101658-7101677 | Msa0234360:CDS | 40.0% | |
| AGTGGTGTTCATCAATGATG+TGG | - | chr2_2:7101705-7101724 | Msa0234360:CDS | 40.0% | |
| ! | TGGACCTTTTAATGTTCGTG+CGG | - | chr2_2:7101744-7101763 | Msa0234360:CDS | 40.0% |
| AATGCCGCACGAACATTAAA+AGG | + | chr2_2:7101751-7101770 | None:intergenic | 40.0% | |
| TTTAATGTTCGTGCGGCATT+TGG | - | chr2_2:7101751-7101770 | Msa0234360:CDS | 40.0% | |
| TTAATGTTCGTGCGGCATTT+GGG | - | chr2_2:7101752-7101771 | Msa0234360:CDS | 40.0% | |
| GCTGTTCTTGTACATCAAAC+TGG | - | chr2_2:7101781-7101800 | Msa0234360:CDS | 40.0% | |
| !! | CCATACTGGTTTGTTAACAC+AGG | + | chr2_2:7101811-7101830 | None:intergenic | 40.0% |
| CCTGTGTTAACAAACCAGTA+TGG | - | chr2_2:7101808-7101827 | Msa0234360:intron | 40.0% | |
| GAAAATAACATGCACCATGC+TGG | + | chr2_2:7101852-7101871 | None:intergenic | 40.0% | |
| AGATGTAGGGGAAAAAATGC+TGG | - | chr2_2:7101968-7101987 | Msa0234360:CDS | 40.0% | |
| AAAAATGCTGGAGAGTGATG+AGG | - | chr2_2:7101980-7101999 | Msa0234360:CDS | 40.0% | |
| !! | CATTGGTGATGAGTGTTGCA+GGG | + | chr2_2:7099957-7099976 | None:intergenic | 45.0% |
| ! | AGTTGATGTCATGCTGCCAT+TGG | + | chr2_2:7099974-7099993 | None:intergenic | 45.0% |
| TTTGGATTCCACCTTGGCTT+TGG | + | chr2_2:7100219-7100238 | None:intergenic | 45.0% | |
| !!! | TCTGGTTTTGGATTCCACCT+TGG | + | chr2_2:7100225-7100244 | None:intergenic | 45.0% |
| AGAGCACAGTTGCAAGAGTA+TGG | - | chr2_2:7100318-7100337 | Msa0234360:intron | 45.0% | |
| CCAAGGGAAAATACTTTGGC+AGG | + | chr2_2:7100570-7100589 | None:intergenic | 45.0% | |
| !! | CCTGCCAAAGTATTTTCCCT+TGG | - | chr2_2:7100567-7100586 | Msa0234360:intron | 45.0% |
| !! | TACTTGTGGTGGTGGAAGAA+GGG | + | chr2_2:7100682-7100701 | None:intergenic | 45.0% |
| !! | TTACTTGTGGTGGTGGAAGA+AGG | + | chr2_2:7100683-7100702 | None:intergenic | 45.0% |
| TTCTTCCCAGTGCAACATCA+TGG | - | chr2_2:7100726-7100745 | Msa0234360:intron | 45.0% | |
| CTTGTCCATGATGTTGCACT+GGG | + | chr2_2:7100734-7100753 | None:intergenic | 45.0% | |
| TGATTGAGCAGGAACCATGT+TGG | + | chr2_2:7100811-7100830 | None:intergenic | 45.0% | |
| ATGGTTCCTGCTCAATCACA+TGG | - | chr2_2:7100813-7100832 | Msa0234360:intron | 45.0% | |
| AACAGATGTTCAGATGTGGG+GGG | + | chr2_2:7100968-7100987 | None:intergenic | 45.0% | |
| GGCAAACAGATGTTCAGATG+TGG | + | chr2_2:7100972-7100991 | None:intergenic | 45.0% | |
| AACAGTAGTAGGAGTTGTGG+CGG | + | chr2_2:7100997-7101016 | None:intergenic | 45.0% | |
| !! | TGATTGAACAGTGATGGTGG+AGG | + | chr2_2:7101036-7101055 | None:intergenic | 45.0% |
| AGGTGATTGAACAGTGATGG+TGG | + | chr2_2:7101039-7101058 | None:intergenic | 45.0% | |
| AAGACGTGGTTAGTGTACCA+TGG | - | chr2_2:7101524-7101543 | Msa0234360:CDS | 45.0% | |
| !! | ACTGATTTTGCAGCAACACC+TGG | + | chr2_2:7101688-7101707 | None:intergenic | 45.0% |
| !! | AGGTGTTGCTGCAAAATCAG+TGG | - | chr2_2:7101687-7101706 | Msa0234360:CDS | 45.0% |
| CATCAATGATGTGGCCTTTG+AGG | - | chr2_2:7101714-7101733 | Msa0234360:CDS | 45.0% | |
| TAATGTTCGTGCGGCATTTG+GGG | - | chr2_2:7101753-7101772 | Msa0234360:CDS | 45.0% | |
| AGTGAAGAGTGACACCATAC+TGG | + | chr2_2:7101825-7101844 | None:intergenic | 45.0% | |
| !! | CATTGGTGATGAGTGTTGCA+GGG | + | chr2_2:7099957-7099976 | None:intergenic | 45.0% |
| ! | AGTTGATGTCATGCTGCCAT+TGG | + | chr2_2:7099974-7099993 | None:intergenic | 45.0% |
| TTTGGATTCCACCTTGGCTT+TGG | + | chr2_2:7100219-7100238 | None:intergenic | 45.0% | |
| !!! | TCTGGTTTTGGATTCCACCT+TGG | + | chr2_2:7100225-7100244 | None:intergenic | 45.0% |
| AGAGCACAGTTGCAAGAGTA+TGG | - | chr2_2:7100318-7100337 | Msa0234360:intron | 45.0% | |
| CCAAGGGAAAATACTTTGGC+AGG | + | chr2_2:7100570-7100589 | None:intergenic | 45.0% | |
| !! | CCTGCCAAAGTATTTTCCCT+TGG | - | chr2_2:7100567-7100586 | Msa0234360:intron | 45.0% |
| !! | TACTTGTGGTGGTGGAAGAA+GGG | + | chr2_2:7100682-7100701 | None:intergenic | 45.0% |
| !! | TTACTTGTGGTGGTGGAAGA+AGG | + | chr2_2:7100683-7100702 | None:intergenic | 45.0% |
| TTCTTCCCAGTGCAACATCA+TGG | - | chr2_2:7100726-7100745 | Msa0234360:intron | 45.0% | |
| CTTGTCCATGATGTTGCACT+GGG | + | chr2_2:7100734-7100753 | None:intergenic | 45.0% | |
| TGATTGAGCAGGAACCATGT+TGG | + | chr2_2:7100811-7100830 | None:intergenic | 45.0% | |
| ATGGTTCCTGCTCAATCACA+TGG | - | chr2_2:7100813-7100832 | Msa0234360:intron | 45.0% | |
| AACAGATGTTCAGATGTGGG+GGG | + | chr2_2:7100968-7100987 | None:intergenic | 45.0% | |
| GGCAAACAGATGTTCAGATG+TGG | + | chr2_2:7100972-7100991 | None:intergenic | 45.0% | |
| AACAGTAGTAGGAGTTGTGG+CGG | + | chr2_2:7100997-7101016 | None:intergenic | 45.0% | |
| !! | TGATTGAACAGTGATGGTGG+AGG | + | chr2_2:7101036-7101055 | None:intergenic | 45.0% |
| AGGTGATTGAACAGTGATGG+TGG | + | chr2_2:7101039-7101058 | None:intergenic | 45.0% | |
| AAGACGTGGTTAGTGTACCA+TGG | - | chr2_2:7101524-7101543 | Msa0234360:CDS | 45.0% | |
| !! | ACTGATTTTGCAGCAACACC+TGG | + | chr2_2:7101688-7101707 | None:intergenic | 45.0% |
| !! | AGGTGTTGCTGCAAAATCAG+TGG | - | chr2_2:7101687-7101706 | Msa0234360:CDS | 45.0% |
| CATCAATGATGTGGCCTTTG+AGG | - | chr2_2:7101714-7101733 | Msa0234360:CDS | 45.0% | |
| TAATGTTCGTGCGGCATTTG+GGG | - | chr2_2:7101753-7101772 | Msa0234360:CDS | 45.0% | |
| AGTGAAGAGTGACACCATAC+TGG | + | chr2_2:7101825-7101844 | None:intergenic | 45.0% | |
| !!! | TATTTTTTTATTTTTCTTTT+AGG | - | chr2_2:7101367-7101386 | Msa0234360:CDS | 5.0% |
| !!! | TATTTTTTTATTTTTCTTTT+AGG | - | chr2_2:7101367-7101386 | Msa0234360:CDS | 5.0% |
| !! | CCATTGGTGATGAGTGTTGC+AGG | + | chr2_2:7099958-7099977 | None:intergenic | 50.0% |
| CCTGCAACACTCATCACCAA+TGG | - | chr2_2:7099955-7099974 | Msa0234360:intron | 50.0% | |
| GTAGCTGGTGCAGTTACTTG+TGG | + | chr2_2:7100696-7100715 | None:intergenic | 50.0% | |
| CCTTGTCCATGATGTTGCAC+TGG | + | chr2_2:7100735-7100754 | None:intergenic | 50.0% | |
| CCAGTGCAACATCATGGACA+AGG | - | chr2_2:7100732-7100751 | Msa0234360:intron | 50.0% | |
| TGCTGACCATGTGATTGAGC+AGG | + | chr2_2:7100822-7100841 | None:intergenic | 50.0% | |
| GGTCAGCAACACCATAACAC+TGG | - | chr2_2:7100834-7100853 | Msa0234360:intron | 50.0% | |
| TGTTCAGATGTGGGGGGATT+TGG | + | chr2_2:7100962-7100981 | None:intergenic | 50.0% | |
| ACAGTAGTAGGAGTTGTGGC+GGG | + | chr2_2:7100996-7101015 | None:intergenic | 50.0% | |
| !! | GTGATGGTGGAGGAAGTAGT+AGG | + | chr2_2:7101026-7101045 | None:intergenic | 50.0% |
| CACACGTGACCCAAAAACCA+TGG | + | chr2_2:7101544-7101563 | None:intergenic | 50.0% | |
| !!! | GTTTTTGGGTCACGTGTGCA+TGG | - | chr2_2:7101546-7101565 | Msa0234360:CDS | 50.0% |
| ! | TCACGTGTGCATGGCTCTAT+TGG | - | chr2_2:7101555-7101574 | Msa0234360:CDS | 50.0% |
| !! | ATCTCAGGCATTGGTGAACC+AGG | - | chr2_2:7101667-7101686 | Msa0234360:CDS | 50.0% |
| AGGTCCAGAAGCAACCTCAA+AGG | + | chr2_2:7101731-7101750 | None:intergenic | 50.0% | |
| ACTCTTCACTCACTCCAGCA+TGG | - | chr2_2:7101835-7101854 | Msa0234360:intron | 50.0% | |
| !! | CCATTGGTGATGAGTGTTGC+AGG | + | chr2_2:7099958-7099977 | None:intergenic | 50.0% |
| CCTGCAACACTCATCACCAA+TGG | - | chr2_2:7099955-7099974 | Msa0234360:intron | 50.0% | |
| GTAGCTGGTGCAGTTACTTG+TGG | + | chr2_2:7100696-7100715 | None:intergenic | 50.0% | |
| CCTTGTCCATGATGTTGCAC+TGG | + | chr2_2:7100735-7100754 | None:intergenic | 50.0% | |
| CCAGTGCAACATCATGGACA+AGG | - | chr2_2:7100732-7100751 | Msa0234360:intron | 50.0% | |
| TGCTGACCATGTGATTGAGC+AGG | + | chr2_2:7100822-7100841 | None:intergenic | 50.0% | |
| GGTCAGCAACACCATAACAC+TGG | - | chr2_2:7100834-7100853 | Msa0234360:intron | 50.0% | |
| TGTTCAGATGTGGGGGGATT+TGG | + | chr2_2:7100962-7100981 | None:intergenic | 50.0% | |
| ACAGTAGTAGGAGTTGTGGC+GGG | + | chr2_2:7100996-7101015 | None:intergenic | 50.0% | |
| !! | GTGATGGTGGAGGAAGTAGT+AGG | + | chr2_2:7101026-7101045 | None:intergenic | 50.0% |
| CACACGTGACCCAAAAACCA+TGG | + | chr2_2:7101544-7101563 | None:intergenic | 50.0% | |
| !!! | GTTTTTGGGTCACGTGTGCA+TGG | - | chr2_2:7101546-7101565 | Msa0234360:CDS | 50.0% |
| ! | TCACGTGTGCATGGCTCTAT+TGG | - | chr2_2:7101555-7101574 | Msa0234360:CDS | 50.0% |
| !! | ATCTCAGGCATTGGTGAACC+AGG | - | chr2_2:7101667-7101686 | Msa0234360:CDS | 50.0% |
| AGGTCCAGAAGCAACCTCAA+AGG | + | chr2_2:7101731-7101750 | None:intergenic | 50.0% | |
| ACTCTTCACTCACTCCAGCA+TGG | - | chr2_2:7101835-7101854 | Msa0234360:intron | 50.0% | |
| CACAGAACCCCTTACTCCTC+AGG | - | chr2_2:7100017-7100036 | Msa0234360:intron | 55.0% | |
| GAAGTCCTGAGCCAAAGCCA+AGG | - | chr2_2:7100205-7100224 | Msa0234360:CDS | 55.0% | |
| !! | TTCCACCTTGGCTTTGGCTC+AGG | + | chr2_2:7100213-7100232 | None:intergenic | 55.0% |
| GGTGCAGTTACTTGTGGTGG+TGG | + | chr2_2:7100690-7100709 | None:intergenic | 55.0% | |
| GCTGGTGCAGTTACTTGTGG+TGG | + | chr2_2:7100693-7100712 | None:intergenic | 55.0% | |
| !! | GTGGCCTTTGAGGTTGCTTC+TGG | - | chr2_2:7101724-7101743 | Msa0234360:CDS | 55.0% |
| CACAGAACCCCTTACTCCTC+AGG | - | chr2_2:7100017-7100036 | Msa0234360:intron | 55.0% | |
| GAAGTCCTGAGCCAAAGCCA+AGG | - | chr2_2:7100205-7100224 | Msa0234360:CDS | 55.0% | |
| !! | TTCCACCTTGGCTTTGGCTC+AGG | + | chr2_2:7100213-7100232 | None:intergenic | 55.0% |
| GGTGCAGTTACTTGTGGTGG+TGG | + | chr2_2:7100690-7100709 | None:intergenic | 55.0% | |
| GCTGGTGCAGTTACTTGTGG+TGG | + | chr2_2:7100693-7100712 | None:intergenic | 55.0% | |
| !! | GTGGCCTTTGAGGTTGCTTC+TGG | - | chr2_2:7101724-7101743 | Msa0234360:CDS | 55.0% |
| GTCCTGAGCCAAAGCCAAGG+TGG | - | chr2_2:7100208-7100227 | Msa0234360:CDS | 60.0% | |
| ! | GTAGTAGGAGTTGTGGCGGG+TGG | + | chr2_2:7100993-7101012 | None:intergenic | 60.0% |
| GTCCTGAGCCAAAGCCAAGG+TGG | - | chr2_2:7100208-7100227 | Msa0234360:CDS | 60.0% | |
| ! | GTAGTAGGAGTTGTGGCGGG+TGG | + | chr2_2:7100993-7101012 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 7099772 | 7102224 | 7099772 | ID=Msa0234360;Name=Msa0234360 |
| chr2_2 | mRNA | 7099772 | 7102224 | 7099772 | ID=Msa0234360-mRNA-1;Parent=Msa0234360;Name=Msa0234360-mRNA-1;_AED=0.03;_eAED=0.03;_QI=137|0.33|0.25|1|0.66|0.75|4|0|444 |
| chr2_2 | exon | 7099772 | 7099891 | 7099772 | ID=Msa0234360-mRNA-1:exon:3083;Parent=Msa0234360-mRNA-1 |
| chr2_2 | exon | 7100123 | 7100322 | 7100123 | ID=Msa0234360-mRNA-1:exon:3082;Parent=Msa0234360-mRNA-1 |
| chr2_2 | exon | 7100919 | 7101803 | 7100919 | ID=Msa0234360-mRNA-1:exon:3081;Parent=Msa0234360-mRNA-1 |
| chr2_2 | exon | 7101958 | 7102224 | 7101958 | ID=Msa0234360-mRNA-1:exon:3080;Parent=Msa0234360-mRNA-1 |
| chr2_2 | five_prime_UTR | 7102088 | 7102224 | 7102088 | ID=Msa0234360-mRNA-1:five_prime_utr;Parent=Msa0234360-mRNA-1 |
| chr2_2 | CDS | 7101958 | 7102087 | 7101958 | ID=Msa0234360-mRNA-1:cds;Parent=Msa0234360-mRNA-1 |
| chr2_2 | CDS | 7100919 | 7101803 | 7100919 | ID=Msa0234360-mRNA-1:cds;Parent=Msa0234360-mRNA-1 |
| chr2_2 | CDS | 7100123 | 7100322 | 7100123 | ID=Msa0234360-mRNA-1:cds;Parent=Msa0234360-mRNA-1 |
| chr2_2 | CDS | 7099772 | 7099891 | 7099772 | ID=Msa0234360-mRNA-1:cds;Parent=Msa0234360-mRNA-1 |
| Gene Sequence |
| Protein sequence |
