Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197300 | XP_003594243.1 | 98.750 | 240 | 3 | 0 | 1 | 240 | 1 | 240 | 3.91e-173 | 487 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197300 | sp|Q9M8S8|VTC4_ARATH | 82.083 | 240 | 42 | 1 | 1 | 240 | 1 | 239 | 5.01e-143 | 404 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197300 | G7IP84 | 98.750 | 240 | 3 | 0 | 1 | 240 | 1 | 240 | 1.87e-173 | 487 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0197300 | Msa0239340 | 0.995994 | 3.525223e-222 | -8.615850e-47 |
| Msa0197300 | Msa0277400 | 0.876108 | 1.813794e-68 | -8.615850e-47 |
| Msa0197300 | Msa1379570 | 0.869126 | 3.910288e-66 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197300 | MtrunA17_Chr2g0290121 | 98.340 | 241 | 3 | 1 | 1 | 240 | 1 | 241 | 1.57e-175 | 483 |
| Msa0197300 | MtrunA17_Chr2g0306101 | 35.897 | 234 | 137 | 6 | 11 | 237 | 66 | 293 | 1.27e-36 | 132 |
| Msa0197300 | MtrunA17_Chr3g0145001 | 28.270 | 237 | 155 | 6 | 7 | 239 | 62 | 287 | 1.00e-20 | 89.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0197300 | AT3G02870.1 | 82.083 | 240 | 42 | 1 | 1 | 240 | 1 | 239 | 5.10e-144 | 404 |
| Msa0197300 | AT3G02870.3 | 80.833 | 240 | 42 | 1 | 1 | 240 | 1 | 236 | 9.95e-142 | 398 |
| Msa0197300 | AT3G02870.2 | 81.250 | 240 | 42 | 2 | 1 | 240 | 1 | 237 | 8.45e-141 | 395 |
| Msa0197300 | AT1G31190.1 | 35.294 | 238 | 132 | 8 | 12 | 237 | 87 | 314 | 4.76e-32 | 120 |
| Msa0197300 | AT4G39120.1 | 26.360 | 239 | 162 | 4 | 4 | 239 | 79 | 306 | 6.85e-20 | 87.4 |
| Msa0197300 | AT4G39120.2 | 26.360 | 239 | 162 | 4 | 4 | 239 | 108 | 335 | 1.06e-19 | 87.0 |
Find 74 sgRNAs with CRISPR-Local
Find 301 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TACCACACCTCATTGATTAT+TGG | 0.252568 | 2_1:+15025597 | None:intergenic |
| TTGAATGGGAACCCTATAAA+AGG | 0.275907 | 2_1:-15025289 | Msa0197300:intron |
| TATGTTCGACGTGCTTAGTT+TGG | 0.301815 | 2_1:+15026453 | None:intergenic |
| GAAGAAACCACAGCTGCTTT+TGG | 0.311320 | 2_1:-15025849 | Msa0197300:CDS |
| GTCTCCATTGGTCTTACAAT+TGG | 0.356667 | 2_1:-15025651 | Msa0197300:CDS |
| CTGGATGTGTTCTATGAAAC+TGG | 0.361010 | 2_1:-15023710 | Msa0197300:CDS |
| ATGTTCGACGTGCTTAGTTT+GGG | 0.361457 | 2_1:+15026454 | None:intergenic |
| AAGCAAACTATTAATCCTAT+TGG | 0.366970 | 2_1:+15023888 | None:intergenic |
| GGGAAAGGTGCTTTCTTGAA+TGG | 0.393210 | 2_1:-15025304 | Msa0197300:CDS |
| TTATGTTTCGCAGGTTGATT+TGG | 0.403023 | 2_1:-15026067 | Msa0197300:intron |
| AGTGTCATCACAAACTGAAT+TGG | 0.403212 | 2_1:-15025186 | Msa0197300:CDS |
| TTGTGGTCTTATTAGTTCAT+TGG | 0.409883 | 2_1:-15025873 | Msa0197300:intron |
| CCCTTCGTTTGTGTCTCCAT+TGG | 0.411102 | 2_1:-15025663 | Msa0197300:CDS |
| CACATGGATTGTTGATCCCT+TGG | 0.431815 | 2_1:-15025802 | Msa0197300:CDS |
| ACTAAGCACGTCGAACATAA+AGG | 0.438472 | 2_1:-15026449 | Msa0197300:CDS |
| GGAAAGGTGCTTTCTTGAAT+GGG | 0.450317 | 2_1:-15025303 | Msa0197300:CDS |
| GATTAATAGTTTGCTTTACA+AGG | 0.459303 | 2_1:-15023881 | Msa0197300:intron |
| GTGTTCTATGAAACTGGATT+TGG | 0.463035 | 2_1:-15023704 | Msa0197300:CDS |
| TCTCTTTCCAGGGATGTGGC+AGG | 0.464025 | 2_1:-15022764 | Msa0197300:intron |
| ACAGCTTTATCCCACTCATA+AGG | 0.465552 | 2_1:-15025995 | Msa0197300:intron |
| CACTAGATGCGACCACCAAT+AGG | 0.470798 | 2_1:-15023903 | Msa0197300:CDS |
| GCTGTCATTGTTAGAGAAGC+TGG | 0.476874 | 2_1:-15022737 | Msa0197300:CDS |
| TTCTATGAAACTGGATTTGG+TGG | 0.477412 | 2_1:-15023701 | Msa0197300:CDS |
| TCATATCAGGTTATTCGAAA+AGG | 0.480344 | 2_1:-15026482 | Msa0197300:intron |
| TATTTAAGCAAAGTTACTTA+CGG | 0.481698 | 2_1:+15022698 | None:intergenic |
| TGGAATTGCATGTGGAAGAC+TGG | 0.486197 | 2_1:-15023729 | Msa0197300:CDS |
| TCCTGTGCTCTGAATCTTTG+TGG | 0.486333 | 2_1:-15023749 | Msa0197300:CDS |
| GGTCTCTCTTTCCAGGGATG+TGG | 0.490417 | 2_1:-15022768 | Msa0197300:intron |
| TGAACAGAAACGAGATGATA+CGG | 0.495443 | 2_1:+15026796 | None:intergenic |
| TGTTGAGTGTGGTGAGTGGC+CGG | 0.503182 | 2_1:-15026879 | Msa0197300:five_prime_UTR |
| TCGCCTACTAACGCACTAAC+CGG | 0.533062 | 2_1:+15026860 | None:intergenic |
| TTCACTGCAGTCCATGGGAA+AGG | 0.541447 | 2_1:-15025319 | Msa0197300:CDS |
| TAGTAGGCGAAAGGTAGGAC+AGG | 0.549833 | 2_1:-15026847 | Msa0197300:five_prime_UTR |
| TCAAGAAAGCACCTTTCCCA+TGG | 0.553403 | 2_1:+15025308 | None:intergenic |
| CAAACTATTAATCCTATTGG+TGG | 0.553541 | 2_1:+15023891 | None:intergenic |
| AGTACATAAAAGACACATGC+GGG | 0.560887 | 2_1:-15026906 | Msa0197300:five_prime_UTR |
| AGGCGAAAGGTAGGACAGGA+AGG | 0.565104 | 2_1:-15026843 | Msa0197300:five_prime_UTR |
| TGGATTGTTGATCCCTTGGA+TGG | 0.566106 | 2_1:-15025798 | Msa0197300:CDS |
| GTCGACGCTGCTCATAAAGC+TGG | 0.566423 | 2_1:-15026595 | Msa0197300:CDS |
| GGAACTACTAACTTTGTGCA+TGG | 0.566745 | 2_1:-15025777 | Msa0197300:CDS |
| TCCACAAAGATTCAGAGCAC+AGG | 0.570894 | 2_1:+15023748 | None:intergenic |
| GGCTGGAACAAAACGTGACA+AGG | 0.572747 | 2_1:-15023929 | Msa0197300:CDS |
| CTTTCCAGGGATGTGGCAGG+TGG | 0.578921 | 2_1:-15022761 | Msa0197300:intron |
| TGTAGTTCCAAAAGCAGCTG+TGG | 0.579976 | 2_1:+15025842 | None:intergenic |
| GAACAGAAACGAGATGATAC+GGG | 0.581281 | 2_1:+15026797 | None:intergenic |
| AAAGTTAGTAGTTCCATCCA+AGG | 0.583222 | 2_1:+15025785 | None:intergenic |
| TGGCCGGTTAGTGCGTTAGT+AGG | 0.587865 | 2_1:-15026863 | Msa0197300:five_prime_UTR |
| TGCGTTAGTAGGCGAAAGGT+AGG | 0.588989 | 2_1:-15026852 | Msa0197300:five_prime_UTR |
| GAACTACTAACTTTGTGCAT+GGG | 0.591023 | 2_1:-15025776 | Msa0197300:intron |
| CCAATGGAGACACAAACGAA+GGG | 0.595236 | 2_1:+15025663 | None:intergenic |
| TTGTACACAACACCGACTGT+TGG | 0.598803 | 2_1:+15025621 | None:intergenic |
| CTATCAGAACAGAACAAACA+TGG | 0.603365 | 2_1:-15026767 | Msa0197300:exon |
| GAACTCTCTTCTTGCAACTG+AGG | 0.612995 | 2_1:-15025162 | Msa0197300:intron |
| TCGGAATGAACCTTATGAGT+GGG | 0.614146 | 2_1:+15025985 | None:intergenic |
| ATCGGAATGAACCTTATGAG+TGG | 0.614350 | 2_1:+15025984 | None:intergenic |
| AATCTTTGTGGAATTGCATG+TGG | 0.620245 | 2_1:-15023737 | Msa0197300:CDS |
| AAACTGGATTTGGTGGTCCA+TGG | 0.624338 | 2_1:-15023694 | Msa0197300:intron |
| CAGCGTCGACAGCAGATGCG+AGG | 0.636535 | 2_1:+15026608 | None:intergenic |
| GTGAGATCTATTAGAATGAG+CGG | 0.638610 | 2_1:-15023773 | Msa0197300:CDS |
| GAAACGAGATGATACGGGAA+AGG | 0.639370 | 2_1:+15026802 | None:intergenic |
| CAATGGAGACACAAACGAAG+GGG | 0.643264 | 2_1:+15025664 | None:intergenic |
| ACAAACATGGCTGACAACAA+TGG | 0.645798 | 2_1:-15026754 | Msa0197300:intron |
| AAGTTAGTAGTTCCATCCAA+GGG | 0.647544 | 2_1:+15025786 | None:intergenic |
| GCACGTCGAACATAAAGGAT+CGG | 0.652028 | 2_1:-15026444 | Msa0197300:intron |
| ATTGGAAAAGTTCCAACAGT+CGG | 0.655715 | 2_1:-15025633 | Msa0197300:CDS |
| TTAGTGCGTTAGTAGGCGAA+AGG | 0.660502 | 2_1:-15026856 | Msa0197300:five_prime_UTR |
| CAAGGGATCAACAATCCATG+TGG | 0.665230 | 2_1:+15025803 | None:intergenic |
| AACTTACAGATGATCCCACA+TGG | 0.672174 | 2_1:-15025818 | Msa0197300:CDS |
| AAGGGATCAACAATCCATGT+GGG | 0.674293 | 2_1:+15025804 | None:intergenic |
| ACCAATGGAGACACAAACGA+AGG | 0.679016 | 2_1:+15025662 | None:intergenic |
| GTACAATCCAATAATCAATG+AGG | 0.684726 | 2_1:-15025604 | Msa0197300:intron |
| TAGTACATAAAAGACACATG+CGG | 0.724510 | 2_1:-15026907 | Msa0197300:five_prime_UTR |
| GTCATTGTTAGAGAAGCTGG+AGG | 0.743505 | 2_1:-15022734 | Msa0197300:CDS |
| GTACATAAAAGACACATGCG+GGG | 0.762189 | 2_1:-15026905 | Msa0197300:five_prime_UTR |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TATAATAAATTTTACAGAAT+TGG | + | chr2_1:15024932-15024951 | None:intergenic | 10.0% |
| !! | TTAAAAATATACAGATAATT+TGG | + | chr2_1:15024980-15024999 | None:intergenic | 10.0% |
| !!! | TTAAGTTTTAAGAATAAATA+GGG | - | chr2_1:15026152-15026171 | Msa0197300:intron | 10.0% |
| !!! | AGAAAAATTTAATGATTTTG+TGG | + | chr2_1:15024059-15024078 | None:intergenic | 15.0% |
| !! | TTTAGGAATATTATTCAATA+AGG | - | chr2_1:15024161-15024180 | Msa0197300:intron | 15.0% |
| !! | TATTATTCAATAAGGATTAT+CGG | - | chr2_1:15024169-15024188 | Msa0197300:intron | 15.0% |
| !! | AGAAATAAAAAACTTATCTA+GGG | + | chr2_1:15025153-15025172 | None:intergenic | 15.0% |
| !! | TAGAAATAAAAAACTTATCT+AGG | + | chr2_1:15025154-15025173 | None:intergenic | 15.0% |
| !! | TAAAAAAATACATGTATACT+TGG | + | chr2_1:15025498-15025517 | None:intergenic | 15.0% |
| !! | AGTTAATTCAAAAAAATTCA+TGG | + | chr2_1:15025756-15025775 | None:intergenic | 15.0% |
| !!! | GTTAAGTTTTAAGAATAAAT+AGG | - | chr2_1:15026151-15026170 | Msa0197300:intron | 15.0% |
| !!! | TAAGTTTTAAGAATAAATAG+GGG | - | chr2_1:15026153-15026172 | Msa0197300:intron | 15.0% |
| !! | AATATTATTCTGTAATCAAA+AGG | - | chr2_1:15026264-15026283 | Msa0197300:intron | 15.0% |
| !! | ATATTATTCTGTAATCAAAA+GGG | - | chr2_1:15026265-15026284 | Msa0197300:intron | 15.0% |
| !! | TGATATAGAAGAATAAAATA+GGG | + | chr2_1:15026296-15026315 | None:intergenic | 15.0% |
| !! | ATAATAGCTTATGTTAAAAA+TGG | - | chr2_1:15026605-15026624 | Msa0197300:CDS | 15.0% |
| !!! | TTTTCTTATGTTAAATTGTA+AGG | - | chr2_1:15026718-15026737 | Msa0197300:intron | 15.0% |
| !! | ATTCTTTCTTATATCATATC+AGG | - | chr2_1:15023101-15023120 | Msa0197300:intron | 20.0% |
| !!! | TGATTTGAATTTGAGATTTT+AGG | + | chr2_1:15023214-15023233 | None:intergenic | 20.0% |
| !! | ACAATAATAAGTGAAATCAA+CGG | + | chr2_1:15023266-15023285 | None:intergenic | 20.0% |
| !!! | ATTTTTCATTGATTATAAGC+TGG | + | chr2_1:15023478-15023497 | None:intergenic | 20.0% |
| !! | CAAAAACATTATATGATTAG+AGG | + | chr2_1:15023641-15023660 | None:intergenic | 20.0% |
| !!! | CATATAATGTTTTTGATTAG+TGG | - | chr2_1:15023646-15023665 | Msa0197300:intron | 20.0% |
| !!! | ATTTCTGATATTTTCTTTGA+TGG | - | chr2_1:15023851-15023870 | Msa0197300:intron | 20.0% |
| !!! | TTTCTGATATTTTCTTTGAT+GGG | - | chr2_1:15023852-15023871 | Msa0197300:intron | 20.0% |
| !! | TTAGTCCAATATGTAAATAT+GGG | + | chr2_1:15023891-15023910 | None:intergenic | 20.0% |
| !! | TTTAGTCCAATATGTAAATA+TGG | + | chr2_1:15023892-15023911 | None:intergenic | 20.0% |
| !!! | TAGTATGCAAATTGAAATTT+TGG | - | chr2_1:15024235-15024254 | Msa0197300:intron | 20.0% |
| !! | TTTATTATTGTTTATGTGGT+TGG | + | chr2_1:15024628-15024647 | None:intergenic | 20.0% |
| !!! | AAGCTTTATTATTGTTTATG+TGG | + | chr2_1:15024632-15024651 | None:intergenic | 20.0% |
| !! | TAAAACTTGGAATATTAAGT+GGG | + | chr2_1:15025122-15025141 | None:intergenic | 20.0% |
| !! | TTAAAACTTGGAATATTAAG+TGG | + | chr2_1:15025123-15025142 | None:intergenic | 20.0% |
| !!! | TATTTCCTGCATATTTTTTT+TGG | - | chr2_1:15025931-15025950 | Msa0197300:intron | 20.0% |
| !! | TCTAATATATTCGAAATGTA+CGG | + | chr2_1:15026036-15026055 | None:intergenic | 20.0% |
| !! | ATAATTAATTAAGTCAGTAG+TGG | - | chr2_1:15026125-15026144 | Msa0197300:intron | 20.0% |
| !! | TAATTAATTAAGTCAGTAGT+GGG | - | chr2_1:15026126-15026145 | Msa0197300:intron | 20.0% |
| !! | CTGATATAGAAGAATAAAAT+AGG | + | chr2_1:15026297-15026316 | None:intergenic | 20.0% |
| !!! | TTTTATTCTTCTATATCAGT+TGG | - | chr2_1:15026298-15026317 | Msa0197300:intron | 20.0% |
| !!! | TATTTCCTGCATATTTTTTT+TGG | - | chr2_1:15025931-15025950 | Msa0197300:intron | 20.0% |
| !!! | GTTTTATGTATGAATCTTAT+AGG | - | chr2_1:15026675-15026694 | Msa0197300:intron | 20.0% |
| !! | TATTTAAGCAAAGTTACTTA+CGG | + | chr2_1:15026901-15026920 | None:intergenic | 20.0% |
| !!! | AATTGATAGTGATAGATGAA+GGG | + | chr2_1:15023071-15023090 | None:intergenic | 25.0% |
| !!! | AAATTGATAGTGATAGATGA+AGG | + | chr2_1:15023072-15023091 | None:intergenic | 25.0% |
| ! | GAGAAAAAATAGAAGAGAAT+GGG | + | chr2_1:15023185-15023204 | None:intergenic | 25.0% |
| ! | AGAGAAAAAATAGAAGAGAA+TGG | + | chr2_1:15023186-15023205 | None:intergenic | 25.0% |
| !!! | TTGAATTTGAGATTTTAGGA+TGG | + | chr2_1:15023210-15023229 | None:intergenic | 25.0% |
| ! | AGAAATAAGTAAGTAGTTTG+AGG | - | chr2_1:15023359-15023378 | Msa0197300:intron | 25.0% |
| !! | TTACTTGTTAGTAATGTGAT+TGG | - | chr2_1:15023419-15023438 | Msa0197300:intron | 25.0% |
| ! | TTATATGATTAGAGGAAGAT+CGG | + | chr2_1:15023633-15023652 | None:intergenic | 25.0% |
| !!! | TTTTTGATTAGTGGCTATTA+TGG | - | chr2_1:15023655-15023674 | Msa0197300:intron | 25.0% |
| !! | TTCTGATATTTTCTTTGATG+GGG | - | chr2_1:15023853-15023872 | Msa0197300:intron | 25.0% |
| !! | ATATGTAAATATGGGAGTAT+CGG | + | chr2_1:15023883-15023902 | None:intergenic | 25.0% |
| ! | ATACTCCCATATTTACATAT+TGG | - | chr2_1:15023883-15023902 | Msa0197300:CDS | 25.0% |
| ! | CTAAAAATTATACTATCTGC+AGG | - | chr2_1:15023907-15023926 | Msa0197300:CDS | 25.0% |
| ! | CTTAAAATGATTCTTCAAGA+AGG | + | chr2_1:15024029-15024048 | None:intergenic | 25.0% |
| ! | AAATTTCCAAAAAGAAGCTT+TGG | + | chr2_1:15024124-15024143 | None:intergenic | 25.0% |
| ! | GACATTGAAGTGATTAATTT+AGG | - | chr2_1:15024144-15024163 | Msa0197300:intron | 25.0% |
| ! | ATAACAGTATAAGGCAAATT+AGG | + | chr2_1:15024681-15024700 | None:intergenic | 25.0% |
| ! | AAGTCATGTATAACAGTATA+AGG | + | chr2_1:15024690-15024709 | None:intergenic | 25.0% |
| ! | CAATTGTATAGGAAATATCA+AGG | + | chr2_1:15024875-15024894 | None:intergenic | 25.0% |
| ! | CTTGATATTTCCTATACAAT+TGG | - | chr2_1:15024873-15024892 | Msa0197300:intron | 25.0% |
| ! | TACTTCTTTACCAATTGTAT+AGG | + | chr2_1:15024886-15024905 | None:intergenic | 25.0% |
| !!! | AAATGATTTTAAAGCGTCTT+AGG | - | chr2_1:15025053-15025072 | Msa0197300:intron | 25.0% |
| !!! | AATGATTTTAAAGCGTCTTA+GGG | - | chr2_1:15025054-15025073 | Msa0197300:intron | 25.0% |
| ! | AAAATACATGTATACTTGGT+GGG | + | chr2_1:15025494-15025513 | None:intergenic | 25.0% |
| ! | AAAAATACATGTATACTTGG+TGG | + | chr2_1:15025495-15025514 | None:intergenic | 25.0% |
| ! | TGGAAATCTTACTAATTGTA+AGG | + | chr2_1:15025521-15025540 | None:intergenic | 25.0% |
| ! | AATTAGAATTCCAAGCATTA+TGG | + | chr2_1:15025541-15025560 | None:intergenic | 25.0% |
| ! | ATAATGCTTGGAATTCTAAT+TGG | - | chr2_1:15025540-15025559 | Msa0197300:intron | 25.0% |
| !!! | AATATCAAGATTATTGGTTC+AGG | - | chr2_1:15025568-15025587 | Msa0197300:intron | 25.0% |
| ! | AAGCAAACTATTAATCCTAT+TGG | + | chr2_1:15025711-15025730 | None:intergenic | 25.0% |
| !!! | GATTAATAGTTTGCTTTACA+AGG | - | chr2_1:15025715-15025734 | Msa0197300:intron | 25.0% |
| ! | CTAATATATTCGAAATGTAC+GGG | + | chr2_1:15026035-15026054 | None:intergenic | 25.0% |
| ! | AGTAGTTAATTATGCAGTTA+TGG | - | chr2_1:15026081-15026100 | Msa0197300:intron | 25.0% |
| !!! | AAAACCTTTAAAACGAATCA+GGG | + | chr2_1:15026660-15026679 | None:intergenic | 25.0% |
| !!! | TAAAACCTTTAAAACGAATC+AGG | + | chr2_1:15026661-15026680 | None:intergenic | 25.0% |
| TAGTACATAAAAGACACATG+CGG | - | chr2_1:15022689-15022708 | Msa0197300:three_prime_UTR | 30.0% | |
| TCATATCAGGTTATTCGAAA+AGG | - | chr2_1:15023114-15023133 | Msa0197300:intron | 30.0% | |
| ATAATAAGTGAAATCAACGG+CGG | + | chr2_1:15023263-15023282 | None:intergenic | 30.0% | |
| ! | ATATCTTTGTTATGTTTCGC+AGG | - | chr2_1:15023520-15023539 | Msa0197300:intron | 30.0% |
| CTGAAGTTCATTTGTATTTG+TGG | - | chr2_1:15023706-15023725 | Msa0197300:CDS | 30.0% | |
| !! | TTGTGGTCTTATTAGTTCAT+TGG | - | chr2_1:15023723-15023742 | Msa0197300:CDS | 30.0% |
| ! | TTTTCCAATTGTAAGACCAA+TGG | + | chr2_1:15023952-15023971 | None:intergenic | 30.0% |
| GTACAATCCAATAATCAATG+AGG | - | chr2_1:15023992-15024011 | Msa0197300:intron | 30.0% | |
| ATTTGCATACTAAGCAATGA+AGG | + | chr2_1:15024227-15024246 | None:intergenic | 30.0% | |
| ATTGATACAGGTACATGATA+AGG | + | chr2_1:15024547-15024566 | None:intergenic | 30.0% | |
| AATGACCAACAAAATCAGAA+TGG | - | chr2_1:15024573-15024592 | Msa0197300:intron | 30.0% | |
| ! | AAGAACCATTCTGATTTTGT+TGG | + | chr2_1:15024581-15024600 | None:intergenic | 30.0% |
| TTATACCCTCAAAGTTTATG+TGG | - | chr2_1:15024947-15024966 | Msa0197300:intron | 30.0% | |
| TAGGGAATAAGCTTAAAACT+TGG | + | chr2_1:15025135-15025154 | None:intergenic | 30.0% | |
| GCTTATCAAACACTTATCTA+GGG | + | chr2_1:15025189-15025208 | None:intergenic | 30.0% | |
| AGCTTATCAAACACTTATCT+AGG | + | chr2_1:15025190-15025209 | None:intergenic | 30.0% | |
| AATCACTAATCCCACTTAAA+AGG | - | chr2_1:15025455-15025474 | Msa0197300:intron | 30.0% | |
| ! | AAATACATGTATACTTGGTG+GGG | + | chr2_1:15025493-15025512 | None:intergenic | 30.0% |
| AGTAAGATTTCCATAATGCT+TGG | - | chr2_1:15025528-15025547 | Msa0197300:intron | 30.0% | |
| GCATGGAATATCAAGATTAT+TGG | - | chr2_1:15025562-15025581 | Msa0197300:intron | 30.0% | |
| !! | CAAACAGTCATTGATTCAAA+AGG | + | chr2_1:15025613-15025632 | None:intergenic | 30.0% |
| CAAACTATTAATCCTATTGG+TGG | + | chr2_1:15025708-15025727 | None:intergenic | 30.0% | |
| CAATGCCAAAAAAAATATGC+AGG | + | chr2_1:15025939-15025958 | None:intergenic | 30.0% | |
| ATAATATTGCAGAACTTCGA+GGG | + | chr2_1:15026252-15026271 | None:intergenic | 30.0% | |
| AATAATATTGCAGAACTTCG+AGG | + | chr2_1:15026253-15026272 | None:intergenic | 30.0% | |
| CAATGCCAAAAAAAATATGC+AGG | + | chr2_1:15025939-15025958 | None:intergenic | 30.0% | |
| ! | TGTACATCCGGAATTATTTT+AGG | - | chr2_1:15026544-15026563 | Msa0197300:intron | 30.0% |
| !! | GTACATCCGGAATTATTTTA+GGG | - | chr2_1:15026545-15026564 | Msa0197300:intron | 30.0% |
| TATTAGAGAAAAAGTTCCCT+CGG | + | chr2_1:15026571-15026590 | None:intergenic | 30.0% | |
| !! | AAACCTTTAAAACGAATCAG+GGG | + | chr2_1:15026659-15026678 | None:intergenic | 30.0% |
| AGTACATAAAAGACACATGC+GGG | - | chr2_1:15022690-15022709 | Msa0197300:three_prime_UTR | 35.0% | |
| TGAACAGAAACGAGATGATA+CGG | + | chr2_1:15022803-15022822 | None:intergenic | 35.0% | |
| CTATCAGAACAGAACAAACA+TGG | - | chr2_1:15022829-15022848 | Msa0197300:intron | 35.0% | |
| !! | CGTTTCAGTTTGTTGTAGTA+TGG | - | chr2_1:15022890-15022909 | Msa0197300:intron | 35.0% |
| !! | TTATGTTTCGCAGGTTGATT+TGG | - | chr2_1:15023529-15023548 | Msa0197300:intron | 35.0% |
| TATGGCTACTTATCAGTTAC+CGG | - | chr2_1:15023673-15023692 | Msa0197300:intron | 35.0% | |
| GAACTTCAGCAAATATACAC+CGG | + | chr2_1:15023695-15023714 | None:intergenic | 35.0% | |
| AAGTTAGTAGTTCCATCCAA+GGG | + | chr2_1:15023813-15023832 | None:intergenic | 35.0% | |
| AAAGTTAGTAGTTCCATCCA+AGG | + | chr2_1:15023814-15023833 | None:intergenic | 35.0% | |
| GAACTACTAACTTTGTGCAT+GGG | - | chr2_1:15023820-15023839 | Msa0197300:intron | 35.0% | |
| ATTGGAAAAGTTCCAACAGT+CGG | - | chr2_1:15023963-15023982 | Msa0197300:intron | 35.0% | |
| ATCCAATAATCAATGAGGTG+TGG | - | chr2_1:15023997-15024016 | Msa0197300:intron | 35.0% | |
| ! | TACCACACCTCATTGATTAT+TGG | + | chr2_1:15024002-15024021 | None:intergenic | 35.0% |
| !! | AAAAAGAAGCTTTGGAGCAA+TGG | + | chr2_1:15024116-15024135 | None:intergenic | 35.0% |
| ! | ATTGCTCCAAAGCTTCTTTT+TGG | - | chr2_1:15024115-15024134 | Msa0197300:intron | 35.0% |
| TTCAATAAGGATTATCGGCA+TGG | - | chr2_1:15024174-15024193 | Msa0197300:intron | 35.0% | |
| TTGAATGGGAACCCTATAAA+AGG | - | chr2_1:15024307-15024326 | Msa0197300:intron | 35.0% | |
| GATCGAAAGATGAAAAACAG+AGG | + | chr2_1:15024338-15024357 | None:intergenic | 35.0% | |
| TGTGATGACACTGAAATTCA+AGG | + | chr2_1:15024402-15024421 | None:intergenic | 35.0% | |
| AGTGTCATCACAAACTGAAT+TGG | - | chr2_1:15024410-15024429 | Msa0197300:intron | 35.0% | |
| TTAGGTGTTAGTCCAAATAC+AGG | + | chr2_1:15024663-15024682 | None:intergenic | 35.0% | |
| CAGATTATGACAGTGTCATA+GGG | + | chr2_1:15024733-15024752 | None:intergenic | 35.0% | |
| TCAGATTATGACAGTGTCAT+AGG | + | chr2_1:15024734-15024753 | None:intergenic | 35.0% | |
| TGTTAGAATTTCTACACTCG+TGG | - | chr2_1:15024772-15024791 | Msa0197300:intron | 35.0% | |
| ATCAGCCACATAAACTTTGA+GGG | + | chr2_1:15024955-15024974 | None:intergenic | 35.0% | |
| TATCAGCCACATAAACTTTG+AGG | + | chr2_1:15024956-15024975 | None:intergenic | 35.0% | |
| !! | TGATCACGTTGTAACTTGTT+GGG | + | chr2_1:15025408-15025427 | None:intergenic | 35.0% |
| !! | TGGGGATAAACCTTTTAAGT+GGG | + | chr2_1:15025468-15025487 | None:intergenic | 35.0% |
| ! | ATGGGGATAAACCTTTTAAG+TGG | + | chr2_1:15025469-15025488 | None:intergenic | 35.0% |
| AATAGATCTCACCTGACATA+TGG | + | chr2_1:15025815-15025834 | None:intergenic | 35.0% | |
| GTGAGATCTATTAGAATGAG+CGG | - | chr2_1:15025823-15025842 | Msa0197300:CDS | 35.0% | |
| AATCTTTGTGGAATTGCATG+TGG | - | chr2_1:15025859-15025878 | Msa0197300:CDS | 35.0% | |
| GTGTTCTATGAAACTGGATT+TGG | - | chr2_1:15025892-15025911 | Msa0197300:intron | 35.0% | |
| TTCTATGAAACTGGATTTGG+TGG | - | chr2_1:15025895-15025914 | Msa0197300:intron | 35.0% | |
| ATATATTCGAAATGTACGGG+TGG | + | chr2_1:15026032-15026051 | None:intergenic | 35.0% | |
| ! | TTAATTAAGTCAGTAGTGGG+AGG | - | chr2_1:15026129-15026148 | Msa0197300:intron | 35.0% |
| AAGAATAAATAGGGGAGAGA+AGG | - | chr2_1:15026161-15026180 | Msa0197300:intron | 35.0% | |
| AGAATAAATAGGGGAGAGAA+GGG | - | chr2_1:15026162-15026181 | Msa0197300:intron | 35.0% | |
| ! | GAGCAATTTTCGAAATGTAC+GGG | + | chr2_1:15026434-15026453 | None:intergenic | 35.0% |
| ! | GGAGCAATTTTCGAAATGTA+CGG | + | chr2_1:15026435-15026454 | None:intergenic | 35.0% |
| !!! | CTTTTTCTGAAGTGTACATC+CGG | - | chr2_1:15026532-15026551 | Msa0197300:intron | 35.0% |
| AAAAATGGCCTTTGACCTAA+CGG | - | chr2_1:15026620-15026639 | Msa0197300:CDS | 35.0% | |
| TAACATTTGCTTTAGCCTAG+TGG | - | chr2_1:15026776-15026795 | Msa0197300:five_prime_UTR | 35.0% | |
| GTACATAAAAGACACATGCG+GGG | - | chr2_1:15022691-15022710 | Msa0197300:three_prime_UTR | 40.0% | |
| GAACAGAAACGAGATGATAC+GGG | + | chr2_1:15022802-15022821 | None:intergenic | 40.0% | |
| ACAAACATGGCTGACAACAA+TGG | - | chr2_1:15022842-15022861 | Msa0197300:intron | 40.0% | |
| ATAGATGAAGGGAGAAAGGA+AGG | + | chr2_1:15023060-15023079 | None:intergenic | 40.0% | |
| AGTGATAGATGAAGGGAGAA+AGG | + | chr2_1:15023064-15023083 | None:intergenic | 40.0% | |
| ATGTTCGACGTGCTTAGTTT+GGG | + | chr2_1:15023145-15023164 | None:intergenic | 40.0% | |
| TATGTTCGACGTGCTTAGTT+TGG | + | chr2_1:15023146-15023165 | None:intergenic | 40.0% | |
| ACTAAGCACGTCGAACATAA+AGG | - | chr2_1:15023147-15023166 | Msa0197300:intron | 40.0% | |
| CTTGTTCTCTGTTCTTGCAA+AGG | - | chr2_1:15023388-15023407 | Msa0197300:intron | 40.0% | |
| ! | ACAGCTTTATCCCACTCATA+AGG | - | chr2_1:15023601-15023620 | Msa0197300:intron | 40.0% |
| TCGGAATGAACCTTATGAGT+GGG | + | chr2_1:15023614-15023633 | None:intergenic | 40.0% | |
| ATCGGAATGAACCTTATGAG+TGG | + | chr2_1:15023615-15023634 | None:intergenic | 40.0% | |
| AACTTACAGATGATCCCACA+TGG | - | chr2_1:15023778-15023797 | Msa0197300:intron | 40.0% | |
| AAGGGATCAACAATCCATGT+GGG | + | chr2_1:15023795-15023814 | None:intergenic | 40.0% | |
| GGAACTACTAACTTTGTGCA+TGG | - | chr2_1:15023819-15023838 | Msa0197300:intron | 40.0% | |
| !! | GTCTCCATTGGTCTTACAAT+TGG | - | chr2_1:15023945-15023964 | Msa0197300:intron | 40.0% |
| GCTATGGCTATATGATCAGA+AGG | + | chr2_1:15024088-15024107 | None:intergenic | 40.0% | |
| ! | GGATTATCGGCATGGAATTT+TGG | - | chr2_1:15024182-15024201 | Msa0197300:intron | 40.0% |
| !! | GGAAAGGTGCTTTCTTGAAT+GGG | - | chr2_1:15024293-15024312 | Msa0197300:intron | 40.0% |
| ! | CAGAGGACACACCTTTTATA+GGG | + | chr2_1:15024321-15024340 | None:intergenic | 40.0% |
| ! | ACAGAGGACACACCTTTTAT+AGG | + | chr2_1:15024322-15024341 | None:intergenic | 40.0% |
| ACAGGTACATGATAAGGACA+GGG | + | chr2_1:15024541-15024560 | None:intergenic | 40.0% | |
| TACAGGTACATGATAAGGAC+AGG | + | chr2_1:15024542-15024561 | None:intergenic | 40.0% | |
| CATGTACCTGTATCAATGTG+TGG | - | chr2_1:15024550-15024569 | Msa0197300:intron | 40.0% | |
| GTCATTCCACACATTGATAC+AGG | + | chr2_1:15024559-15024578 | None:intergenic | 40.0% | |
| ! | GCTTGTTAGTCTCCTGTATT+TGG | - | chr2_1:15024648-15024667 | Msa0197300:intron | 40.0% |
| GAAATGAGATTCTTCAGAGC+AGG | + | chr2_1:15024910-15024929 | None:intergenic | 40.0% | |
| TTAGGGCAGACATGTTAGAT+TGG | - | chr2_1:15025071-15025090 | Msa0197300:intron | 40.0% | |
| CAGATAGCAATCAAGACAGA+AGG | + | chr2_1:15025099-15025118 | None:intergenic | 40.0% | |
| !! | ATCACGTTGTAACTTGTTGG+GGG | + | chr2_1:15025406-15025425 | None:intergenic | 40.0% |
| !! | GATCACGTTGTAACTTGTTG+GGG | + | chr2_1:15025407-15025426 | None:intergenic | 40.0% |
| ! | GTGATCACGTTGTAACTTGT+TGG | + | chr2_1:15025409-15025428 | None:intergenic | 40.0% |
| ! | ATGTATACTTGGTGGGGAAT+GGG | + | chr2_1:15025487-15025506 | None:intergenic | 40.0% |
| GCTTGGAATTCTAATTGGCA+TGG | - | chr2_1:15025545-15025564 | Msa0197300:intron | 40.0% | |
| !! | TTTTTCCCTTCTGAAAGAGC+AGG | - | chr2_1:15025646-15025665 | Msa0197300:CDS | 40.0% |
| TCACCTGACATATGGAAACA+GGG | + | chr2_1:15025807-15025826 | None:intergenic | 40.0% | |
| CTGGATGTGTTCTATGAAAC+TGG | - | chr2_1:15025886-15025905 | Msa0197300:intron | 40.0% | |
| TGCAGGAAATACTCATACCA+TGG | + | chr2_1:15025922-15025941 | None:intergenic | 40.0% | |
| TGGCATTGTCGTTATGTTAC+TGG | - | chr2_1:15025951-15025970 | Msa0197300:intron | 40.0% | |
| TGGCATTGTCGTTATGTTAC+TGG | - | chr2_1:15025951-15025970 | Msa0197300:intron | 40.0% | |
| ! | CAATTTTCGAAATGTACGGG+TGG | + | chr2_1:15026431-15026450 | None:intergenic | 40.0% |
| ! | TTGCTCCAGAAGTGTATTTC+CGG | - | chr2_1:15026448-15026467 | Msa0197300:CDS | 40.0% |
| ATTGTTCGGAAAGACACATC+TGG | - | chr2_1:15026482-15026501 | Msa0197300:intron | 40.0% | |
| AGTCTTAACCGTTAGGTCAA+AGG | + | chr2_1:15026631-15026650 | None:intergenic | 40.0% | |
| !! | AGACCCCTGATTCGTTTTAA+AGG | - | chr2_1:15026653-15026672 | Msa0197300:intron | 40.0% |
| ATTTGCTTTAGCCTAGTGGT+TGG | - | chr2_1:15026780-15026799 | Msa0197300:five_prime_UTR | 40.0% | |
| !! | TAGCCTAGTGGTTGGTTTAT+TGG | - | chr2_1:15026788-15026807 | Msa0197300:five_prime_UTR | 40.0% |
| !! | AGCCTAGTGGTTGGTTTATT+GGG | - | chr2_1:15026789-15026808 | Msa0197300:five_prime_UTR | 40.0% |
| ATCCCAATAAACCAACCACT+AGG | + | chr2_1:15026794-15026813 | None:intergenic | 40.0% | |
| !! | TAGTGGTTGGTTTATTGGGA+TGG | - | chr2_1:15026793-15026812 | Msa0197300:five_prime_UTR | 40.0% |
| GAAAGAGAGACCATGTGATT+AGG | + | chr2_1:15026820-15026839 | None:intergenic | 40.0% | |
| !! | GTTTTGTTGAGTGTGGTGAG+TGG | - | chr2_1:15022713-15022732 | Msa0197300:exon | 45.0% |
| TTAGTGCGTTAGTAGGCGAA+AGG | - | chr2_1:15022740-15022759 | Msa0197300:CDS | 45.0% | |
| GAAACGAGATGATACGGGAA+AGG | + | chr2_1:15022797-15022816 | None:intergenic | 45.0% | |
| GCACGTCGAACATAAAGGAT+CGG | - | chr2_1:15023152-15023171 | Msa0197300:intron | 45.0% | |
| !! | GAAGAAACCACAGCTGCTTT+TGG | - | chr2_1:15023747-15023766 | Msa0197300:CDS | 45.0% |
| TGTAGTTCCAAAAGCAGCTG+TGG | + | chr2_1:15023757-15023776 | None:intergenic | 45.0% | |
| CAAGGGATCAACAATCCATG+TGG | + | chr2_1:15023796-15023815 | None:intergenic | 45.0% | |
| ! | CACATGGATTGTTGATCCCT+TGG | - | chr2_1:15023794-15023813 | Msa0197300:intron | 45.0% |
| TGGATTGTTGATCCCTTGGA+TGG | - | chr2_1:15023798-15023817 | Msa0197300:intron | 45.0% | |
| CAATGGAGACACAAACGAAG+GGG | + | chr2_1:15023935-15023954 | None:intergenic | 45.0% | |
| CCAATGGAGACACAAACGAA+GGG | + | chr2_1:15023936-15023955 | None:intergenic | 45.0% | |
| ACCAATGGAGACACAAACGA+AGG | + | chr2_1:15023937-15023956 | None:intergenic | 45.0% | |
| ! | TTGTACACAACACCGACTGT+TGG | + | chr2_1:15023978-15023997 | None:intergenic | 45.0% |
| !! | AGAAGCTTTGGAGCAATGGT+TGG | + | chr2_1:15024112-15024131 | None:intergenic | 45.0% |
| ! | TAGCTTTTCACTGCAGTCCA+TGG | - | chr2_1:15024271-15024290 | Msa0197300:intron | 45.0% |
| ! | AGCTTTTCACTGCAGTCCAT+GGG | - | chr2_1:15024272-15024291 | Msa0197300:intron | 45.0% |
| !! | TCAAGAAAGCACCTTTCCCA+TGG | + | chr2_1:15024291-15024310 | None:intergenic | 45.0% |
| !! | GGGAAAGGTGCTTTCTTGAA+TGG | - | chr2_1:15024292-15024311 | Msa0197300:intron | 45.0% |
| GAACTCTCTTCTTGCAACTG+AGG | - | chr2_1:15024434-15024453 | Msa0197300:intron | 45.0% | |
| !! | TCACGTTGTAACTTGTTGGG+GGG | + | chr2_1:15025405-15025424 | None:intergenic | 45.0% |
| CAACGTGATCACTGATCAGT+TGG | - | chr2_1:15025417-15025436 | Msa0197300:intron | 45.0% | |
| ! | TGTATACTTGGTGGGGAATG+GGG | + | chr2_1:15025486-15025505 | None:intergenic | 45.0% |
| ! | CATGTATACTTGGTGGGGAA+TGG | + | chr2_1:15025488-15025507 | None:intergenic | 45.0% |
| CTACCCTGTTTCCATATGTC+AGG | - | chr2_1:15025801-15025820 | Msa0197300:CDS | 45.0% | |
| CTCACCTGACATATGGAAAC+AGG | + | chr2_1:15025808-15025827 | None:intergenic | 45.0% | |
| ! | TCCTGTGCTCTGAATCTTTG+TGG | - | chr2_1:15025847-15025866 | Msa0197300:CDS | 45.0% |
| TCCACAAAGATTCAGAGCAC+AGG | + | chr2_1:15025851-15025870 | None:intergenic | 45.0% | |
| TGGAATTGCATGTGGAAGAC+TGG | - | chr2_1:15025867-15025886 | Msa0197300:intron | 45.0% | |
| !! | AAACTGGATTTGGTGGTCCA+TGG | - | chr2_1:15025902-15025921 | Msa0197300:intron | 45.0% |
| TGCTTTACTTGCCCAAAGGT+TGG | + | chr2_1:15025983-15026002 | None:intergenic | 45.0% | |
| ACCTTTGGGCAAGTAAAGCA+AGG | - | chr2_1:15025983-15026002 | Msa0197300:intron | 45.0% | |
| CCTTTGGGCAAGTAAAGCAA+GGG | - | chr2_1:15025984-15026003 | Msa0197300:intron | 45.0% | |
| GCAAGTAAAGCAAGGGCTTT+AGG | - | chr2_1:15025991-15026010 | Msa0197300:intron | 45.0% | |
| AAATGTACGGGTGGACAAAG+TGG | + | chr2_1:15026023-15026042 | None:intergenic | 45.0% | |
| ATCTGAGGATTTGACTGGGA+AGG | - | chr2_1:15026198-15026217 | Msa0197300:intron | 45.0% | |
| TCTGAGGATTTGACTGGGAA+GGG | - | chr2_1:15026199-15026218 | Msa0197300:intron | 45.0% | |
| !! | AAGGGGCCATTTTGGCATTA+GGG | - | chr2_1:15026217-15026236 | Msa0197300:intron | 45.0% |
| TGCTTTACTTGCCCAAAGGT+TGG | + | chr2_1:15025983-15026002 | None:intergenic | 45.0% | |
| ACCTTTGGGCAAGTAAAGCA+AGG | - | chr2_1:15025983-15026002 | Msa0197300:intron | 45.0% | |
| CCTTTGGGCAAGTAAAGCAA+GGG | - | chr2_1:15025984-15026003 | Msa0197300:intron | 45.0% | |
| GCAAGTAAAGCAAGGGCTTT+AGG | - | chr2_1:15025991-15026010 | Msa0197300:intron | 45.0% | |
| AAATGTACGGGTGGACAAAG+TGG | + | chr2_1:15026023-15026042 | None:intergenic | 45.0% | |
| ! | TCCAGAAGTGTATTTCCGGA+CGG | - | chr2_1:15026452-15026471 | Msa0197300:CDS | 45.0% |
| ! | CGAACAATTTTTGTCCCGTC+CGG | + | chr2_1:15026470-15026489 | None:intergenic | 45.0% |
| CGGACGGGACAAAAATTGTT+CGG | - | chr2_1:15026468-15026487 | Msa0197300:CDS | 45.0% | |
| CCTCGGCCCTAAAATAATTC+CGG | + | chr2_1:15026554-15026573 | None:intergenic | 45.0% | |
| !!! | CGGAATTATTTTAGGGCCGA+GGG | - | chr2_1:15026552-15026571 | Msa0197300:intron | 45.0% |
| GGTCTTGAGTCTTAACCGTT+AGG | + | chr2_1:15026638-15026657 | None:intergenic | 45.0% | |
| TTGGGATGGTCCTAATCACA+TGG | - | chr2_1:15026807-15026826 | Msa0197300:five_prime_UTR | 45.0% | |
| ATCACATGGTCTCTCTTTCC+AGG | - | chr2_1:15026821-15026840 | Msa0197300:five_prime_UTR | 45.0% | |
| TCACATGGTCTCTCTTTCCA+GGG | - | chr2_1:15026822-15026841 | Msa0197300:five_prime_UTR | 45.0% | |
| GCTGTCATTGTTAGAGAAGC+TGG | - | chr2_1:15026859-15026878 | Msa0197300:five_prime_UTR | 45.0% | |
| GTCATTGTTAGAGAAGCTGG+AGG | - | chr2_1:15026862-15026881 | Msa0197300:five_prime_UTR | 45.0% | |
| !!! | ATGCGGGGTTTTGTTGAGTG+TGG | - | chr2_1:15022706-15022725 | Msa0197300:exon | 50.0% |
| TCGCCTACTAACGCACTAAC+CGG | + | chr2_1:15022739-15022758 | None:intergenic | 50.0% | |
| TGCGTTAGTAGGCGAAAGGT+AGG | - | chr2_1:15022744-15022763 | Msa0197300:CDS | 50.0% | |
| TAGTAGGCGAAAGGTAGGAC+AGG | - | chr2_1:15022749-15022768 | Msa0197300:CDS | 50.0% | |
| ACGAGAGAGAGAGAGAGAGA+GGG | + | chr2_1:15022873-15022892 | None:intergenic | 50.0% | |
| AACGAGAGAGAGAGAGAGAG+AGG | + | chr2_1:15022874-15022893 | None:intergenic | 50.0% | |
| CCCTTCGTTTGTGTCTCCAT+TGG | - | chr2_1:15023933-15023952 | Msa0197300:intron | 50.0% | |
| TGGAGCAATGGTTGGAGCTA+TGG | + | chr2_1:15024104-15024123 | None:intergenic | 50.0% | |
| TTCACTGCAGTCCATGGGAA+AGG | - | chr2_1:15024277-15024296 | Msa0197300:intron | 50.0% | |
| TCCAGCCTGCTCTTTCAGAA+GGG | + | chr2_1:15025654-15025673 | None:intergenic | 50.0% | |
| TTCCAGCCTGCTCTTTCAGA+AGG | + | chr2_1:15025655-15025674 | None:intergenic | 50.0% | |
| GGCTGGAACAAAACGTGACA+AGG | - | chr2_1:15025667-15025686 | Msa0197300:CDS | 50.0% | |
| CACTAGATGCGACCACCAAT+AGG | - | chr2_1:15025693-15025712 | Msa0197300:intron | 50.0% | |
| ACTTGCCCAAAGGTTGGACA+GGG | + | chr2_1:15025977-15025996 | None:intergenic | 50.0% | |
| TACTTGCCCAAAGGTTGGAC+AGG | + | chr2_1:15025978-15025997 | None:intergenic | 50.0% | |
| CCCTTGCTTTACTTGCCCAA+AGG | + | chr2_1:15025987-15026006 | None:intergenic | 50.0% | |
| GGGAGAGAAGGGAAGATTGA+GGG | - | chr2_1:15026173-15026192 | Msa0197300:intron | 50.0% | |
| GGAGAGAAGGGAAGATTGAG+GGG | - | chr2_1:15026174-15026193 | Msa0197300:intron | 50.0% | |
| GGGCATCTGAGGATTTGACT+GGG | - | chr2_1:15026194-15026213 | Msa0197300:intron | 50.0% | |
| CTGAGGATTTGACTGGGAAG+GGG | - | chr2_1:15026200-15026219 | Msa0197300:intron | 50.0% | |
| !! | GAAGGGGCCATTTTGGCATT+AGG | - | chr2_1:15026216-15026235 | Msa0197300:intron | 50.0% |
| GCACCTCCCTAATGCCAAAA+TGG | + | chr2_1:15026226-15026245 | None:intergenic | 50.0% | |
| ACTTGCCCAAAGGTTGGACA+GGG | + | chr2_1:15025977-15025996 | None:intergenic | 50.0% | |
| TACTTGCCCAAAGGTTGGAC+AGG | + | chr2_1:15025978-15025997 | None:intergenic | 50.0% | |
| CCCTTGCTTTACTTGCCCAA+AGG | + | chr2_1:15025987-15026006 | None:intergenic | 50.0% | |
| ! | CCAGAAGTGTATTTCCGGAC+GGG | - | chr2_1:15026453-15026472 | Msa0197300:CDS | 50.0% |
| !!! | CCGGAATTATTTTAGGGCCG+AGG | - | chr2_1:15026551-15026570 | Msa0197300:intron | 50.0% |
| TGTTGAGTGTGGTGAGTGGC+CGG | - | chr2_1:15022717-15022736 | Msa0197300:CDS | 55.0% | |
| TGGCCGGTTAGTGCGTTAGT+AGG | - | chr2_1:15022733-15022752 | Msa0197300:CDS | 55.0% | |
| AGGCGAAAGGTAGGACAGGA+AGG | - | chr2_1:15022753-15022772 | Msa0197300:CDS | 55.0% | |
| AGAGAGAGAGAGAGAGAGGG+TGG | + | chr2_1:15022870-15022889 | None:intergenic | 55.0% | |
| GTCGACGCTGCTCATAAAGC+TGG | - | chr2_1:15023001-15023020 | Msa0197300:intron | 55.0% | |
| ! | TCCCTTCTGAAAGAGCAGGC+TGG | - | chr2_1:15025650-15025669 | Msa0197300:CDS | 55.0% |
| TACTGGCCCTGTCCAACCTT+TGG | - | chr2_1:15025968-15025987 | Msa0197300:intron | 55.0% | |
| ACTGGCCCTGTCCAACCTTT+GGG | - | chr2_1:15025969-15025988 | Msa0197300:intron | 55.0% | |
| GGGGAGAGAAGGGAAGATTG+AGG | - | chr2_1:15026172-15026191 | Msa0197300:intron | 55.0% | |
| !! | GGAAGATTGAGGGGCATCTG+AGG | - | chr2_1:15026183-15026202 | Msa0197300:intron | 55.0% |
| ! | GGGGCATCTGAGGATTTGAC+TGG | - | chr2_1:15026193-15026212 | Msa0197300:intron | 55.0% |
| ! | TGACTGGGAAGGGGCCATTT+TGG | - | chr2_1:15026209-15026228 | Msa0197300:intron | 55.0% |
| !! | GGGCCATTTTGGCATTAGGG+AGG | - | chr2_1:15026220-15026239 | Msa0197300:intron | 55.0% |
| TACTGGCCCTGTCCAACCTT+TGG | - | chr2_1:15025968-15025987 | Msa0197300:intron | 55.0% | |
| ACTGGCCCTGTCCAACCTTT+GGG | - | chr2_1:15025969-15025988 | Msa0197300:intron | 55.0% | |
| CCCGTCCGGAAATACACTTC+TGG | + | chr2_1:15026456-15026475 | None:intergenic | 55.0% | |
| GGTCTCTCTTTCCAGGGATG+TGG | - | chr2_1:15026828-15026847 | Msa0197300:five_prime_UTR | 55.0% | |
| TCTCTTTCCAGGGATGTGGC+AGG | - | chr2_1:15026832-15026851 | Msa0197300:five_prime_UTR | 55.0% | |
| CTTTCCAGGGATGTGGCAGG+TGG | - | chr2_1:15026835-15026854 | Msa0197300:five_prime_UTR | 60.0% | |
| !! | CAGCGTCGACAGCAGATGCG+AGG | + | chr2_1:15022991-15023010 | None:intergenic | 65.0% |
| AGCACCACCTGCCACATCCC+TGG | + | chr2_1:15026842-15026861 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 15022688 | 15026930 | 15022688 | ID=Msa0197300;Name=Msa0197300 |
| chr2_1 | mRNA | 15022688 | 15026930 | 15022688 | ID=Msa0197300-mRNA-1;Parent=Msa0197300;Name=Msa0197300-mRNA-1;_AED=0.09;_eAED=0.09;_QI=160|1|1|1|1|1|11|27|240 |
| chr2_1 | exon | 15022688 | 15022775 | 15022688 | ID=Msa0197300-mRNA-1:exon:6401;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15023695 | 15023795 | 15023695 | ID=Msa0197300-mRNA-1:exon:6400;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15023882 | 15023950 | 15023882 | ID=Msa0197300-mRNA-1:exon:6399;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15025163 | 15025206 | 15025163 | ID=Msa0197300-mRNA-1:exon:6398;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15025290 | 15025344 | 15025290 | ID=Msa0197300-mRNA-1:exon:6397;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15025605 | 15025689 | 15025605 | ID=Msa0197300-mRNA-1:exon:6396;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15025777 | 15025880 | 15025777 | ID=Msa0197300-mRNA-1:exon:6395;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15025996 | 15026076 | 15025996 | ID=Msa0197300-mRNA-1:exon:6394;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15026445 | 15026495 | 15026445 | ID=Msa0197300-mRNA-1:exon:6393;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15026591 | 15026646 | 15026591 | ID=Msa0197300-mRNA-1:exon:6392;Parent=Msa0197300-mRNA-1 |
| chr2_1 | exon | 15026755 | 15026930 | 15026755 | ID=Msa0197300-mRNA-1:exon:6391;Parent=Msa0197300-mRNA-1 |
| chr2_1 | five_prime_UTR | 15026771 | 15026930 | 15026771 | ID=Msa0197300-mRNA-1:five_prime_utr;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15026755 | 15026770 | 15026755 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15026591 | 15026646 | 15026591 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15026445 | 15026495 | 15026445 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15025996 | 15026076 | 15025996 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15025777 | 15025880 | 15025777 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15025605 | 15025689 | 15025605 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15025290 | 15025344 | 15025290 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15025163 | 15025206 | 15025163 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15023882 | 15023950 | 15023882 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15023695 | 15023795 | 15023695 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | CDS | 15022715 | 15022775 | 15022715 | ID=Msa0197300-mRNA-1:cds;Parent=Msa0197300-mRNA-1 |
| chr2_1 | three_prime_UTR | 15022688 | 15022714 | 15022688 | ID=Msa0197300-mRNA-1:three_prime_utr;Parent=Msa0197300-mRNA-1 |
| Gene Sequence |
| Protein sequence |
