Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0246930 | XP_013463606.1 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1059 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0246930 | sp|Q9LMA1|FMO1_ARATH | 62.157 | 510 | 191 | 2 | 12 | 520 | 11 | 519 | 0.0 | 700 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0246930 | A0A072V7M8 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1059 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0203740 | Msa0246930 | 0.919515 | 4.089665e-87 | -8.615850e-47 |
| Msa0246930 | Msa0324120 | 0.824886 | 6.331376e-54 | -8.615850e-47 |
| Msa0246930 | Msa0909260 | 0.814401 | 1.569595e-51 | -8.615850e-47 |
| Msa0246930 | Msa1242160 | 0.809819 | 1.566798e-50 | -8.615850e-47 |
| Msa0246930 | Msa1283930 | 0.826743 | 2.294138e-54 | -8.615850e-47 |
| Msa0246930 | Msa1322960 | 0.817611 | 3.014634e-52 | -8.615850e-47 |
| Msa0246930 | Msa1326710 | 0.803873 | 2.831411e-49 | -8.615850e-47 |
| Msa0246930 | Msa1433360 | 0.807574 | 4.729002e-50 | -8.615850e-47 |
| Msa0246930 | Msa1445530 | 0.817115 | 3.897341e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0246930 | MtrunA17_Chr2g0301471 | 96.558 | 523 | 18 | 0 | 1 | 523 | 1 | 523 | 0.0 | 1059 |
| Msa0246930 | MtrunA17_Chr2g0301661 | 93.881 | 523 | 32 | 0 | 1 | 523 | 1 | 523 | 0.0 | 982 |
| Msa0246930 | MtrunA17_Chr4g0070101 | 66.667 | 525 | 169 | 4 | 1 | 523 | 3 | 523 | 0.0 | 702 |
| Msa0246930 | MtrunA17_Chr4g0070111 | 73.404 | 282 | 75 | 0 | 242 | 523 | 1 | 282 | 1.14e-163 | 465 |
| Msa0246930 | MtrunA17_Chr2g0305211 | 39.845 | 517 | 301 | 7 | 10 | 519 | 1 | 514 | 9.78e-141 | 416 |
| Msa0246930 | MtrunA17_Chr2g0305231 | 39.845 | 517 | 301 | 7 | 10 | 519 | 1 | 514 | 9.78e-141 | 416 |
| Msa0246930 | MtrunA17_Chr2g0286701 | 82.479 | 234 | 41 | 0 | 1 | 234 | 1 | 234 | 1.34e-140 | 408 |
| Msa0246930 | MtrunA17_Chr2g0304721 | 41.860 | 516 | 289 | 8 | 10 | 519 | 1 | 511 | 4.01e-140 | 414 |
| Msa0246930 | MtrunA17_Chr2g0304651 | 39.231 | 520 | 300 | 8 | 10 | 520 | 1 | 513 | 8.03e-135 | 400 |
| Msa0246930 | MtrunA17_Chr4g0070121 | 62.857 | 210 | 75 | 2 | 27 | 234 | 29 | 237 | 4.19e-84 | 260 |
| Msa0246930 | MtrunA17_Chr2g0286671 | 91.346 | 104 | 9 | 0 | 420 | 523 | 1 | 104 | 2.01e-64 | 204 |
| Msa0246930 | MtrunA17_Chr2g0286681 | 71.681 | 113 | 31 | 1 | 284 | 395 | 5 | 117 | 3.39e-53 | 176 |
| Msa0246930 | MtrunA17_Chr2g0286691 | 70.588 | 68 | 20 | 0 | 233 | 300 | 10 | 77 | 7.55e-29 | 109 |
| Msa0246930 | MtrunA17_Chr1g0169111 | 25.916 | 382 | 219 | 16 | 6 | 381 | 94 | 417 | 7.88e-18 | 86.3 |
| Msa0246930 | MtrunA17_Chr7g0262591 | 26.486 | 370 | 205 | 14 | 16 | 381 | 26 | 332 | 5.71e-17 | 83.2 |
| Msa0246930 | MtrunA17_Chr1g0182991 | 24.865 | 370 | 215 | 15 | 16 | 381 | 27 | 337 | 9.76e-17 | 82.4 |
| Msa0246930 | MtrunA17_Chr3g0091441 | 29.752 | 242 | 121 | 8 | 14 | 229 | 13 | 231 | 2.56e-16 | 81.3 |
| Msa0246930 | MtrunA17_Chr1g0148801 | 24.865 | 370 | 212 | 15 | 16 | 381 | 18 | 325 | 7.57e-16 | 79.7 |
| Msa0246930 | MtrunA17_Chr2g0301651 | 90.909 | 33 | 3 | 0 | 420 | 452 | 1 | 33 | 7.00e-14 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0246930 | AT1G19250.1 | 62.157 | 510 | 191 | 2 | 12 | 520 | 11 | 519 | 0.0 | 700 |
| Msa0246930 | AT5G45180.1 | 56.495 | 485 | 171 | 4 | 12 | 496 | 11 | 455 | 0.0 | 578 |
| Msa0246930 | AT2G33230.1 | 27.394 | 376 | 202 | 18 | 16 | 381 | 34 | 348 | 6.52e-17 | 83.6 |
| Msa0246930 | AT1G04610.1 | 26.415 | 371 | 212 | 16 | 16 | 381 | 39 | 353 | 5.19e-16 | 80.9 |
| Msa0246930 | AT4G28720.1 | 26.546 | 388 | 211 | 17 | 5 | 381 | 16 | 340 | 5.31e-16 | 80.9 |
| Msa0246930 | AT4G13260.2 | 24.815 | 270 | 163 | 9 | 16 | 283 | 30 | 261 | 3.70e-13 | 70.9 |
| Msa0246930 | AT1G21430.1 | 24.397 | 373 | 208 | 14 | 16 | 381 | 11 | 316 | 3.94e-13 | 71.6 |
| Msa0246930 | AT5G07800.1 | 26.515 | 264 | 138 | 8 | 13 | 246 | 15 | 252 | 4.17e-13 | 72.0 |
| Msa0246930 | AT1G12200.2 | 27.132 | 258 | 133 | 8 | 1 | 230 | 1 | 231 | 4.69e-13 | 71.2 |
| Msa0246930 | AT4G13260.1 | 24.138 | 377 | 224 | 13 | 9 | 381 | 23 | 341 | 4.80e-13 | 71.6 |
| Msa0246930 | AT1G62620.2 | 24.314 | 255 | 135 | 9 | 8 | 233 | 7 | 232 | 6.09e-13 | 70.9 |
| Msa0246930 | AT1G12200.1 | 27.132 | 258 | 133 | 8 | 1 | 230 | 1 | 231 | 6.31e-13 | 71.2 |
| Msa0246930 | AT5G43890.1 | 23.861 | 373 | 218 | 13 | 16 | 381 | 27 | 340 | 7.13e-13 | 70.9 |
| Msa0246930 | AT1G62620.1 | 24.603 | 252 | 132 | 9 | 8 | 230 | 7 | 229 | 9.04e-13 | 70.9 |
| Msa0246930 | AT1G04180.1 | 24.865 | 370 | 215 | 14 | 16 | 381 | 27 | 337 | 1.02e-12 | 70.5 |
| Msa0246930 | AT1G63370.2 | 24.206 | 252 | 133 | 9 | 8 | 230 | 7 | 229 | 1.07e-12 | 69.7 |
| Msa0246930 | AT4G32540.1 | 25.000 | 380 | 213 | 18 | 9 | 381 | 16 | 330 | 1.19e-12 | 70.1 |
| Msa0246930 | AT1G63370.1 | 24.206 | 252 | 133 | 9 | 8 | 230 | 7 | 229 | 1.43e-12 | 70.1 |
| Msa0246930 | AT1G62560.2 | 24.000 | 250 | 131 | 9 | 9 | 230 | 8 | 226 | 3.28e-12 | 68.9 |
| Msa0246930 | AT4G32540.2 | 26.562 | 256 | 144 | 11 | 9 | 262 | 16 | 229 | 3.78e-12 | 68.6 |
| Msa0246930 | AT1G62560.1 | 24.000 | 250 | 131 | 9 | 9 | 230 | 8 | 226 | 5.08e-12 | 68.6 |
| Msa0246930 | AT5G11320.1 | 25.000 | 368 | 212 | 15 | 16 | 381 | 19 | 324 | 5.83e-12 | 68.2 |
| Msa0246930 | AT5G11320.2 | 25.000 | 368 | 212 | 15 | 16 | 381 | 19 | 324 | 6.77e-12 | 67.4 |
| Msa0246930 | AT1G65860.1 | 26.295 | 251 | 123 | 10 | 9 | 230 | 8 | 225 | 1.07e-11 | 67.4 |
| Msa0246930 | AT5G61290.1 | 27.984 | 243 | 127 | 9 | 14 | 231 | 16 | 235 | 1.74e-11 | 67.0 |
Find 129 sgRNAs with CRISPR-Local
Find 389 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCCTTCTCACGCTGAGATTT+TGG | 0.091965 | 2_2:+28748713 | Msa0246930:CDS |
| CATTGCTTCCATGTCCTTAA+TGG | 0.136279 | 2_2:-28754190 | None:intergenic |
| TAATCTTTACTTTCTCTTTC+AGG | 0.185583 | 2_2:-28748690 | None:intergenic |
| CTTCACAAATTTCATCATTA+TGG | 0.191455 | 2_2:-28754266 | None:intergenic |
| CCAATTCTTGACACCATAAT+TGG | 0.204297 | 2_2:-28748495 | None:intergenic |
| GAGGAAGAAGAACTTGATTA+AGG | 0.284399 | 2_2:+28754308 | Msa0246930:CDS |
| TGATGAAATTTGTGAAGATT+TGG | 0.290590 | 2_2:+28754272 | Msa0246930:CDS |
| GAGCATCAAAGTGGTGGTTT+TGG | 0.290725 | 2_2:+28750925 | Msa0246930:CDS |
| TAAAGACAACCCACCAATTA+TGG | 0.292860 | 2_2:+28748482 | Msa0246930:CDS |
| ATTGGACACTTCCACATTAT+AGG | 0.303294 | 2_2:+28750036 | Msa0246930:CDS |
| AAACTTCCATTAGAGAAGTA+TGG | 0.311043 | 2_2:+28750795 | Msa0246930:CDS |
| CTGATTCAATTGGTGGTGTT+TGG | 0.316589 | 2_2:+28748595 | Msa0246930:CDS |
| TCTTCCTGAAAAGGGTGTTC+TGG | 0.317237 | 2_2:-28750825 | None:intergenic |
| ATTGTGCATGGTTGCCCTTC+AGG | 0.320608 | 2_2:-28749996 | None:intergenic |
| TTCAACCCATACTTCTCTAA+TGG | 0.327648 | 2_2:-28750801 | None:intergenic |
| AGGAACTGCATCACAACTTT+TGG | 0.340506 | 2_2:+28754237 | Msa0246930:CDS |
| AGCTCCCATACCGGACGTTC+AGG | 0.347698 | 2_2:-28748876 | None:intergenic |
| TATTCCAACAAGCTAGAAAA+AGG | 0.349311 | 2_2:-28751053 | None:intergenic |
| GAGATAATAGGAGGCATAAA+AGG | 0.351598 | 2_2:-28750145 | None:intergenic |
| GGGAAAGAAGGTTGTGGTTG+TGG | 0.353865 | 2_2:+28749552 | Msa0246930:CDS |
| ATACGTTCCATGTGGCTTGC+TGG | 0.361433 | 2_2:+28754114 | Msa0246930:CDS |
| AATGCTCTCACAAACCATTA+AGG | 0.368860 | 2_2:+28754176 | Msa0246930:CDS |
| GATGAAATTTGTGAAGATTT+GGG | 0.369050 | 2_2:+28754273 | Msa0246930:CDS |
| AAGATTTGGGTTGGCATACT+TGG | 0.370246 | 2_2:+28754286 | Msa0246930:CDS |
| TAATGAATCAGACGCCATTC+AGG | 0.375341 | 2_2:+28748911 | Msa0246930:CDS |
| AGCTACTAGTGACCTTGTTA+AGG | 0.378740 | 2_2:+28749531 | Msa0246930:CDS |
| TTTGGAGACATTGTTCCTAT+AGG | 0.379655 | 2_2:+28748613 | Msa0246930:CDS |
| GGTTGAAATCAAGTTTGTTC+GGG | 0.381102 | 2_2:+28748800 | Msa0246930:CDS |
| TATATACCATTGGAGATAAT+AGG | 0.382661 | 2_2:-28750157 | None:intergenic |
| GATGCAAAATCTTCCTGAAA+AGG | 0.389419 | 2_2:-28750834 | None:intergenic |
| CCAATTATGGTGTCAAGAAT+TGG | 0.392328 | 2_2:+28748495 | Msa0246930:CDS |
| TAACCCACAAAGGCCATGTT+TGG | 0.399285 | 2_2:-28754057 | None:intergenic |
| GATGTTGTTCTTCTTGCAAC+TGG | 0.404238 | 2_2:+28750990 | Msa0246930:CDS |
| TGGTTGAAATCAAGTTTGTT+CGG | 0.406466 | 2_2:+28748799 | Msa0246930:CDS |
| GATTCCAAACATGGCCTTTG+TGG | 0.406988 | 2_2:+28754053 | Msa0246930:CDS |
| GGAAAGAAGGTTGTGGTTGT+GGG | 0.417388 | 2_2:+28749553 | Msa0246930:CDS |
| GTGGTTTGCACTGGAAAATA+TGG | 0.430049 | 2_2:+28749409 | Msa0246930:CDS |
| CTTCTTGCAACTGGTTATGA+TGG | 0.433437 | 2_2:+28750999 | Msa0246930:CDS |
| AAACTTGATTTCAACCACTT+TGG | 0.433707 | 2_2:-28748793 | None:intergenic |
| CTTGAACAAATCAAAATAAA+CGG | 0.441646 | 2_2:-28748754 | None:intergenic |
| GTAAACCCTGGTTTGGTGTA+TGG | 0.444256 | 2_2:-28750115 | None:intergenic |
| CAAGGGACCTGAGGTGTTCA+AGG | 0.445930 | 2_2:+28749465 | Msa0246930:CDS |
| CATGGAAATGTTGGCATCAA+TGG | 0.446961 | 2_2:-28749439 | None:intergenic |
| GTGTCAAGAATTGGTATCAT+AGG | 0.455100 | 2_2:+28748504 | Msa0246930:CDS |
| AAATCCTTTGCCTGAACGTC+CGG | 0.456957 | 2_2:+28748866 | Msa0246930:CDS |
| TTATAGTCAGCAGCAGTGTA+AGG | 0.462752 | 2_2:-28754342 | None:intergenic |
| AAGGCCATGTTTGGAATCAA+TGG | 0.465986 | 2_2:-28754048 | None:intergenic |
| CTTTGCCTGAACGTCCGGTA+TGG | 0.469197 | 2_2:+28748871 | Msa0246930:CDS |
| TACTTTCTCTTTCAGGCCAA+GGG | 0.470849 | 2_2:-28748683 | None:intergenic |
| GCTACTAGTGACCTTGTTAA+GGG | 0.472706 | 2_2:+28749532 | Msa0246930:CDS |
| CACTTCCACATTATAGGATG+TGG | 0.475745 | 2_2:+28750042 | Msa0246930:CDS |
| ATTCCAAACATGGCCTTTGT+GGG | 0.477703 | 2_2:+28754054 | Msa0246930:CDS |
| GGTTGTCTTTAGTCAGCATA+GGG | 0.478049 | 2_2:-28748470 | None:intergenic |
| ACCTGAGGTGTTCAAGGGTA+AGG | 0.478572 | 2_2:+28749471 | Msa0246930:CDS |
| TGACCTTGTTAAGGGAAAGA+AGG | 0.483185 | 2_2:+28749540 | Msa0246930:CDS |
| ATGAATTTAGTGATTTCCCT+TGG | 0.484807 | 2_2:+28748667 | Msa0246930:CDS |
| ATGCAAAATCTTCCTGAAAA+GGG | 0.485125 | 2_2:-28750833 | None:intergenic |
| AACCATGCACAATGATCATA+AGG | 0.486955 | 2_2:+28750006 | Msa0246930:CDS |
| TTTAGCCATGGAGTGTGTAC+AGG | 0.489929 | 2_2:+28749597 | Msa0246930:CDS |
| AGAATTGGTATCATAGGTGC+TGG | 0.492588 | 2_2:+28748510 | Msa0246930:CDS |
| TTTGAAGCCACTGATTCAAT+TGG | 0.492788 | 2_2:+28748585 | Msa0246930:CDS |
| TTTGCCTGAACGTCCGGTAT+GGG | 0.493505 | 2_2:+28748872 | Msa0246930:CDS |
| GGGTTGTCTTTAGTCAGCAT+AGG | 0.496524 | 2_2:-28748471 | None:intergenic |
| CCTTCACCATACACCAAACC+AGG | 0.500334 | 2_2:+28750109 | Msa0246930:CDS |
| CCAAAATCTCAGCGTGAGAA+GGG | 0.502428 | 2_2:-28748713 | None:intergenic |
| TCCAAAATCTCAGCGTGAGA+AGG | 0.504059 | 2_2:-28748714 | None:intergenic |
| TTCTTGCAACTGGTTATGAT+GGG | 0.506089 | 2_2:+28751000 | Msa0246930:CDS |
| AACTTCCATTAGAGAAGTAT+GGG | 0.506741 | 2_2:+28750796 | Msa0246930:CDS |
| GAGTTTGTAGTGGTTTGCAC+TGG | 0.512700 | 2_2:+28749400 | Msa0246930:CDS |
| ATGCCTCCTATTATCTCCAA+TGG | 0.513080 | 2_2:+28750151 | Msa0246930:CDS |
| AGCTTGTTGGAATACCCTAC+TGG | 0.513346 | 2_2:+28751062 | Msa0246930:CDS |
| AAGTTTGTTCGGGACAAAGA+AGG | 0.514045 | 2_2:+28748810 | Msa0246930:CDS |
| ACCTCAGGTCCCTTGTTGCA+TGG | 0.517460 | 2_2:-28749457 | None:intergenic |
| TTGAAGCTTAGTACACCTAT+AGG | 0.522294 | 2_2:-28748628 | None:intergenic |
| ACCTTACCCTTGAACACCTC+AGG | 0.522344 | 2_2:-28749472 | None:intergenic |
| TTACTTTCTCTTTCAGGCCA+AGG | 0.523575 | 2_2:-28748684 | None:intergenic |
| CTGGTATCATGCCATTGTAC+AGG | 0.525824 | 2_2:+28751081 | Msa0246930:CDS |
| TGATCATAAGGAGTTTGCAT+TGG | 0.525875 | 2_2:+28750018 | Msa0246930:CDS |
| ATTCTTGACACCATAATTGG+TGG | 0.526017 | 2_2:-28748492 | None:intergenic |
| CAACCTTCTTTCCCTTAACA+AGG | 0.529813 | 2_2:-28749543 | None:intergenic |
| GAAGCCACTGATTCAATTGG+TGG | 0.530458 | 2_2:+28748588 | Msa0246930:CDS |
| CCCTTGTTGCATGGAAATGT+TGG | 0.530793 | 2_2:-28749448 | None:intergenic |
| AAGCCACATGGAACGTATCT+CGG | 0.538091 | 2_2:-28754109 | None:intergenic |
| ATTTGGGTTGGCATACTTGG+AGG | 0.538869 | 2_2:+28754289 | Msa0246930:CDS |
| AAATTTGTGAAGATTTGGGT+TGG | 0.542822 | 2_2:+28754277 | Msa0246930:CDS |
| AAAGGATTTCCATGGTCACC+AGG | 0.547280 | 2_2:-28748852 | None:intergenic |
| CACTGCTGCTGACTATAAGA+AGG | 0.548587 | 2_2:+28754347 | Msa0246930:CDS |
| GTTTGCCTGTACACACTCCA+TGG | 0.550549 | 2_2:-28749602 | None:intergenic |
| ACTTGTTATGAAGGACCTGA+AGG | 0.551898 | 2_2:+28749981 | Msa0246930:intron |
| TTCTTGACACCATAATTGGT+GGG | 0.552760 | 2_2:-28748491 | None:intergenic |
| ATCAGCTATTGATTTAGCCA+TGG | 0.562783 | 2_2:+28749585 | Msa0246930:CDS |
| TCATCCATTGATTCCAAACA+TGG | 0.563445 | 2_2:+28754044 | Msa0246930:CDS |
| CTAAGCTTCAATCACAAACA+TGG | 0.565933 | 2_2:+28748640 | Msa0246930:CDS |
| ATTTGTGTTTACCTGTACAA+TGG | 0.566886 | 2_2:-28751092 | None:intergenic |
| TCCATGCAACAAGGGACCTG+AGG | 0.570241 | 2_2:+28749456 | Msa0246930:CDS |
| TGTTAAGGGAAAGAAGGTTG+TGG | 0.573393 | 2_2:+28749546 | Msa0246930:CDS |
| CATACCGGACGTTCAGGCAA+AGG | 0.579127 | 2_2:-28748870 | None:intergenic |
| TGGAAGTTTCCACAGTAAGT+AGG | 0.579702 | 2_2:-28750781 | None:intergenic |
| CTCACAAACCATTAAGGACA+TGG | 0.585097 | 2_2:+28754182 | Msa0246930:CDS |
| CTTGTTATGAAGGACCTGAA+GGG | 0.589620 | 2_2:+28749982 | Msa0246930:intron |
| ACTTCCACATTATAGGATGT+GGG | 0.591116 | 2_2:+28750043 | Msa0246930:CDS |
| GTACTACTTCGAGTTTGTAG+TGG | 0.591776 | 2_2:+28749390 | Msa0246930:CDS |
| ATCATAGGTGCTGGAGTGAG+TGG | 0.592554 | 2_2:+28748519 | Msa0246930:CDS |
| GTTCAGGCAAAGGATTTCCA+TGG | 0.599336 | 2_2:-28748860 | None:intergenic |
| GCCAACATTTCCATGCAACA+AGG | 0.599576 | 2_2:+28749447 | Msa0246930:CDS |
| GATTTCCATGGTCACCAGGT+AGG | 0.604968 | 2_2:-28748848 | None:intergenic |
| AAAGTGAATAAAGACCTGAA+TGG | 0.607315 | 2_2:-28748925 | None:intergenic |
| GGACGCCTACCTGGTGACCA+TGG | 0.607894 | 2_2:+28748843 | Msa0246930:CDS |
| TGAACAGAAAGCTCCCATAC+CGG | 0.607947 | 2_2:-28748885 | None:intergenic |
| TACAATGGCATGATACCAGT+AGG | 0.611697 | 2_2:-28751077 | None:intergenic |
| TGTTAAGTTCAACACCAAAG+TGG | 0.611740 | 2_2:+28748779 | Msa0246930:CDS |
| AACACCACCAATTGAATCAG+TGG | 0.613507 | 2_2:-28748592 | None:intergenic |
| ATACCATTGGAGATAATAGG+AGG | 0.618461 | 2_2:-28750154 | None:intergenic |
| AAGGGACCTGAGGTGTTCAA+GGG | 0.619139 | 2_2:+28749466 | Msa0246930:CDS |
| CTCCTTATGATCATTGTGCA+TGG | 0.626136 | 2_2:-28750008 | None:intergenic |
| TCAAGAGAGCATCAAAGTGG+TGG | 0.626330 | 2_2:+28750919 | Msa0246930:CDS |
| TCATAGAGTCCTACTTACTG+TGG | 0.632816 | 2_2:+28750772 | Msa0246930:CDS |
| ACTCCCCACATCCTATAATG+TGG | 0.633850 | 2_2:-28750047 | None:intergenic |
| TAATAGACCAGCAAGCCACA+TGG | 0.644884 | 2_2:-28754121 | None:intergenic |
| GAAGAAGAACTTGATTAAGG+AGG | 0.645161 | 2_2:+28754311 | Msa0246930:CDS |
| CTTCCACATTATAGGATGTG+GGG | 0.652290 | 2_2:+28750044 | Msa0246930:CDS |
| CCTGGTTTGGTGTATGGTGA+AGG | 0.657784 | 2_2:-28750109 | None:intergenic |
| ACAATGGCATGATACCAGTA+GGG | 0.660299 | 2_2:-28751076 | None:intergenic |
| CTTCACCATACACCAAACCA+GGG | 0.675353 | 2_2:+28750110 | Msa0246930:CDS |
| ACTCTCAACATAACCCACAA+AGG | 0.682237 | 2_2:-28754067 | None:intergenic |
| TCTTCAAGAGAGCATCAAAG+TGG | 0.688034 | 2_2:+28750916 | Msa0246930:CDS |
| GAGTGTGTACAGGCAAACCA+AGG | 0.694042 | 2_2:+28749607 | Msa0246930:CDS |
| CCAACATTTCCATGCAACAA+GGG | 0.700966 | 2_2:+28749448 | Msa0246930:CDS |
| CATCCGAGATACGTTCCATG+TGG | 0.741395 | 2_2:+28754106 | Msa0246930:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATAAAATAAATT+TGG | + | chr2_2:28752492-28752511 | Msa0246930:intron | 0.0% |
| !!! | TTTTTTTATATTTTTTTTTT+TGG | - | chr2_2:28753537-28753556 | None:intergenic | 0.0% |
| !! | AAAATAAAATCTTATTATAG+GGG | + | chr2_2:28749230-28749249 | Msa0246930:intron | 10.0% |
| !!! | AGAAAAAAATTACTTTTTTA+AGG | + | chr2_2:28750238-28750257 | Msa0246930:intron | 10.0% |
| !!! | AAAAAAAAGTCATTTAATTT+TGG | - | chr2_2:28751274-28751293 | None:intergenic | 10.0% |
| !!! | TAGTTTTTAGTATTTTTAAT+GGG | - | chr2_2:28751693-28751712 | None:intergenic | 10.0% |
| !!! | ATAGTTTTTAGTATTTTTAA+TGG | - | chr2_2:28751694-28751713 | None:intergenic | 10.0% |
| !!! | ATTTTTTTAAAAAGTGATTA+GGG | - | chr2_2:28752715-28752734 | None:intergenic | 10.0% |
| !!! | AAATAATACATTTTGAAATA+AGG | + | chr2_2:28752738-28752757 | Msa0246930:intron | 10.0% |
| !!! | AATAATACATTTTGAAATAA+GGG | + | chr2_2:28752739-28752758 | Msa0246930:intron | 10.0% |
| !!! | AATTAAACAAACTTAATTTT+AGG | - | chr2_2:28753119-28753138 | None:intergenic | 10.0% |
| !! | TTTAAAAATTTAAGAGTTTA+AGG | - | chr2_2:28753144-28753163 | None:intergenic | 10.0% |
| !! | ATAACTATTAAAATTATGTA+AGG | + | chr2_2:28753463-28753482 | Msa0246930:intron | 10.0% |
| !! | GAAAAAAATTGAACTTTATT+AGG | - | chr2_2:28748442-28748461 | None:intergenic | 15.0% |
| !! | AAATTAAATGAGATGAAAAT+TGG | + | chr2_2:28748997-28749016 | Msa0246930:intron | 15.0% |
| !!! | AAGTTGATAGTAAAATAATT+AGG | - | chr2_2:28749359-28749378 | None:intergenic | 15.0% |
| !!! | TCTATGATATTTATCTTTTA+TGG | + | chr2_2:28751742-28751761 | Msa0246930:intron | 15.0% |
| !!! | TGATTTAATATATGTTTTTG+TGG | + | chr2_2:28751769-28751788 | Msa0246930:intron | 15.0% |
| !! | ATCAAAAAGAATTACTAATA+TGG | - | chr2_2:28752430-28752449 | None:intergenic | 15.0% |
| !! | AAATGTAATATACTCATATA+CGG | + | chr2_2:28752517-28752536 | Msa0246930:intron | 15.0% |
| !!! | TTTTTTTAAAAAGTGATTAG+GGG | - | chr2_2:28752714-28752733 | None:intergenic | 15.0% |
| !!! | CATTTTTTTAAAAAGTGATT+AGG | - | chr2_2:28752716-28752735 | None:intergenic | 15.0% |
| !!! | AATTTTATAGACTATAATAG+TGG | - | chr2_2:28752954-28752973 | None:intergenic | 15.0% |
| !!! | ATATCTAACCTTTTATTTTT+GGG | - | chr2_2:28752998-28753017 | None:intergenic | 15.0% |
| !! | AATGCTATTAAAATTTAGTA+AGG | - | chr2_2:28753056-28753075 | None:intergenic | 15.0% |
| !! | GAAATTAAAAAAATGAAACT+TGG | - | chr2_2:28753969-28753988 | None:intergenic | 15.0% |
| !!! | ACATTTTATTAAATAGCATT+TGG | - | chr2_2:28754401-28754420 | None:intergenic | 15.0% |
| !! | CTTGAACAAATCAAAATAAA+CGG | - | chr2_2:28748757-28748776 | None:intergenic | 20.0% |
| !! | AAACAAGCATATTAAACAAT+TGG | + | chr2_2:28749113-28749132 | Msa0246930:intron | 20.0% |
| !! | CAACATGTAAACTAAATTAA+AGG | - | chr2_2:28749306-28749325 | None:intergenic | 20.0% |
| !!! | GTCTAAATATTTTAACATAG+TGG | - | chr2_2:28749722-28749741 | None:intergenic | 20.0% |
| !! | AAATATTTAGACAAATACCT+CGG | + | chr2_2:28749730-28749749 | Msa0246930:intron | 20.0% |
| !!! | TTAACTATATTTTAATACCG+AGG | - | chr2_2:28749750-28749769 | None:intergenic | 20.0% |
| !! | ATTTCACAATGAAAGTAATT+GGG | - | chr2_2:28749930-28749949 | None:intergenic | 20.0% |
| !! | TATTTCACAATGAAAGTAAT+TGG | - | chr2_2:28749931-28749950 | None:intergenic | 20.0% |
| !! | CATATATACATATATACCAT+TGG | - | chr2_2:28750170-28750189 | None:intergenic | 20.0% |
| !! | TGATGTACAAATATAGTATT+CGG | + | chr2_2:28750313-28750332 | Msa0246930:intron | 20.0% |
| !! | TTAATTATTGTCTTTATGCT+TGG | + | chr2_2:28750589-28750608 | Msa0246930:intron | 20.0% |
| !! | TTTAGATTGAGTATATTGAT+TGG | - | chr2_2:28751148-28751167 | None:intergenic | 20.0% |
| !! | ATTATACTCCTTCTAAATTT+AGG | + | chr2_2:28751484-28751503 | Msa0246930:intron | 20.0% |
| !! | TAATACATCCTAAATTTAGA+AGG | - | chr2_2:28751495-28751514 | None:intergenic | 20.0% |
| !!! | ACTTTTTTCATGCTTTTTTA+CGG | - | chr2_2:28751588-28751607 | None:intergenic | 20.0% |
| !!! | TTAATATTATTTTGCATGCA+TGG | + | chr2_2:28751713-28751732 | Msa0246930:intron | 20.0% |
| !! | ACAACTGTAAAATTTATAGA+TGG | + | chr2_2:28752285-28752304 | Msa0246930:intron | 20.0% |
| !! | AATGTAATATACTCATATAC+GGG | + | chr2_2:28752518-28752537 | Msa0246930:intron | 20.0% |
| !!! | CATATCTAACCTTTTATTTT+TGG | - | chr2_2:28752999-28753018 | None:intergenic | 20.0% |
| !!! | TAAAAGGTTAGATATGTTTT+TGG | + | chr2_2:28753003-28753022 | Msa0246930:intron | 20.0% |
| !!! | TAGAAGTTCTCAATTTTATA+GGG | - | chr2_2:28753030-28753049 | None:intergenic | 20.0% |
| !!! | TTAGAAGTTCTCAATTTTAT+AGG | - | chr2_2:28753031-28753050 | None:intergenic | 20.0% |
| !!! | AAACAAACTTAATTTTAGGA+GGG | - | chr2_2:28753115-28753134 | None:intergenic | 20.0% |
| !!! | TAAACAAACTTAATTTTAGG+AGG | - | chr2_2:28753116-28753135 | None:intergenic | 20.0% |
| !!! | CACATTTAGAACAATATAAA+AGG | + | chr2_2:28753178-28753197 | Msa0246930:intron | 20.0% |
| !!! | TCATTTTCAGATGAAAATAT+AGG | + | chr2_2:28753560-28753579 | Msa0246930:intron | 20.0% |
| !!! | AAAAGAGCAATTTTGTATAA+AGG | - | chr2_2:28753708-28753727 | None:intergenic | 20.0% |
| !!! | TCAAATTATCTGTTGATTTT+GGG | - | chr2_2:28753875-28753894 | None:intergenic | 20.0% |
| ! | TAATCTTTACTTTCTCTTTC+AGG | - | chr2_2:28748693-28748712 | None:intergenic | 25.0% |
| !! | ATGTTTCTATAAGAGAAACA+AGG | - | chr2_2:28749167-28749186 | None:intergenic | 25.0% |
| ! | TAGAAACATAATACATGCAA+AGG | + | chr2_2:28749178-28749197 | Msa0246930:intron | 25.0% |
| ! | AGAAACATAATACATGCAAA+GGG | + | chr2_2:28749179-28749198 | Msa0246930:intron | 25.0% |
| !!! | TTGCTTTAAACTTGTTATGA+AGG | + | chr2_2:28749972-28749991 | Msa0246930:intron | 25.0% |
| ! | TATATACCATTGGAGATAAT+AGG | - | chr2_2:28750160-28750179 | None:intergenic | 25.0% |
| !! | TTTTATTAACCGTAGTAGTT+TGG | - | chr2_2:28750539-28750558 | None:intergenic | 25.0% |
| !!! | TAATTGATGACTTTTAACAG+AGG | + | chr2_2:28750733-28750752 | Msa0246930:intron | 25.0% |
| !! | AAAAAGTGATCCTATCTTTT+TGG | + | chr2_2:28751601-28751620 | Msa0246930:intron | 25.0% |
| !! | AAAAGTGATCCTATCTTTTT+GGG | + | chr2_2:28751602-28751621 | Msa0246930:intron | 25.0% |
| !!! | CTTTTGTATGGATATTTTTG+TGG | + | chr2_2:28751807-28751826 | Msa0246930:intron | 25.0% |
| ! | ATGTCTTCATAAACTTAGTT+GGG | - | chr2_2:28751895-28751914 | None:intergenic | 25.0% |
| ! | CTTAAAATAAAGCCTTTGAT+AGG | - | chr2_2:28752094-28752113 | None:intergenic | 25.0% |
| !!! | TGAAATTTGTTACACAAACT+AGG | - | chr2_2:28752169-28752188 | None:intergenic | 25.0% |
| ! | AATCATGTCTGATAACAATA+AGG | + | chr2_2:28752324-28752343 | Msa0246930:intron | 25.0% |
| !!! | TTGATTTGTGTGAATTGTTA+AGG | - | chr2_2:28752403-28752422 | None:intergenic | 25.0% |
| ! | CCTATTAATTTAATTAAGCC+GGG | - | chr2_2:28752584-28752603 | None:intergenic | 25.0% |
| ! | GCCTATTAATTTAATTAAGC+CGG | - | chr2_2:28752585-28752604 | None:intergenic | 25.0% |
| !!! | ATACATTTTGAAATAAGGGT+TGG | + | chr2_2:28752743-28752762 | Msa0246930:intron | 25.0% |
| !!! | TACATTTTGAAATAAGGGTT+GGG | + | chr2_2:28752744-28752763 | Msa0246930:intron | 25.0% |
| ! | AATTGGGCTTATAAATAAAG+TGG | + | chr2_2:28752797-28752816 | Msa0246930:intron | 25.0% |
| ! | ATTGGGCTTATAAATAAAGT+GGG | + | chr2_2:28752798-28752817 | Msa0246930:intron | 25.0% |
| ! | AATCTTGACCCAAAAATAAA+AGG | + | chr2_2:28752987-28753006 | Msa0246930:intron | 25.0% |
| !! | TTGGATAAATATGTTTCTGA+TGG | - | chr2_2:28753518-28753537 | None:intergenic | 25.0% |
| ! | AACAATCATTCTAAACATGA+TGG | - | chr2_2:28753630-28753649 | None:intergenic | 25.0% |
| ! | TGATTTGATTAGTAGATGTT+AGG | + | chr2_2:28753727-28753746 | Msa0246930:intron | 25.0% |
| !!! | CAAATTATCTGTTGATTTTG+GGG | - | chr2_2:28753874-28753893 | None:intergenic | 25.0% |
| !!! | GTCAAATTATCTGTTGATTT+TGG | - | chr2_2:28753876-28753895 | None:intergenic | 25.0% |
| ! | AAGCAATGAAAAAATCTACA+AGG | + | chr2_2:28754205-28754224 | Msa0246930:CDS | 25.0% |
| !!! | AATCTACAAGGTTTTATACA+AGG | + | chr2_2:28754217-28754236 | Msa0246930:CDS | 25.0% |
| ! | CTTCACAAATTTCATCATTA+TGG | - | chr2_2:28754269-28754288 | None:intergenic | 25.0% |
| ! | TGATGAAATTTGTGAAGATT+TGG | + | chr2_2:28754272-28754291 | Msa0246930:CDS | 25.0% |
| ! | GATGAAATTTGTGAAGATTT+GGG | + | chr2_2:28754273-28754292 | Msa0246930:CDS | 25.0% |
| !!! | GGAAGATTGAGTTTTTTATT+TGG | + | chr2_2:28754368-28754387 | Msa0246930:exon | 25.0% |
| ATGAATTTAGTGATTTCCCT+TGG | + | chr2_2:28748667-28748686 | Msa0246930:CDS | 30.0% | |
| AAACTTGATTTCAACCACTT+TGG | - | chr2_2:28748796-28748815 | None:intergenic | 30.0% | |
| ! | TGGTTGAAATCAAGTTTGTT+CGG | + | chr2_2:28748799-28748818 | Msa0246930:CDS | 30.0% |
| !!! | GACAAAGAAGGTTTTGATTT+TGG | + | chr2_2:28748822-28748841 | Msa0246930:CDS | 30.0% |
| AAAGTGAATAAAGACCTGAA+TGG | - | chr2_2:28748928-28748947 | None:intergenic | 30.0% | |
| TTCTATAAGAGAAACAAGGA+AGG | - | chr2_2:28749163-28749182 | None:intergenic | 30.0% | |
| TACATGCAAAGGGTAAAAAT+TGG | + | chr2_2:28749189-28749208 | Msa0246930:intron | 30.0% | |
| CATAGTGAAAATTGTTACCT+TGG | - | chr2_2:28749627-28749646 | None:intergenic | 30.0% | |
| ATGTGTTTAATGTGTACACA+AGG | + | chr2_2:28749666-28749685 | Msa0246930:intron | 30.0% | |
| TAATTGGGCAGATGTTAATT+TGG | - | chr2_2:28749915-28749934 | None:intergenic | 30.0% | |
| ATTTGAAAGACAGTTCAAAC+AGG | + | chr2_2:28750402-28750421 | Msa0246930:intron | 30.0% | |
| AGTTGTAAAATGAGCTCAAA+AGG | + | chr2_2:28750469-28750488 | Msa0246930:intron | 30.0% | |
| AAACTTCCATTAGAGAAGTA+TGG | + | chr2_2:28750795-28750814 | Msa0246930:CDS | 30.0% | |
| ! | AACTTCCATTAGAGAAGTAT+GGG | + | chr2_2:28750796-28750815 | Msa0246930:CDS | 30.0% |
| ATGCAAAATCTTCCTGAAAA+GGG | - | chr2_2:28750836-28750855 | None:intergenic | 30.0% | |
| !!! | TTTTTTCAATGAGGCTGATA+AGG | + | chr2_2:28750884-28750903 | Msa0246930:CDS | 30.0% |
| !! | TTTTTCAATGAGGCTGATAA+GGG | + | chr2_2:28750885-28750904 | Msa0246930:CDS | 30.0% |
| TATTCCAACAAGCTAGAAAA+AGG | - | chr2_2:28751056-28751075 | None:intergenic | 30.0% | |
| ATTTGTGTTTACCTGTACAA+TGG | - | chr2_2:28751095-28751114 | None:intergenic | 30.0% | |
| ! | GATTGAGTATATTGATTGGA+GGG | - | chr2_2:28751144-28751163 | None:intergenic | 30.0% |
| ! | AGATTGAGTATATTGATTGG+AGG | - | chr2_2:28751145-28751164 | None:intergenic | 30.0% |
| ! | CACTAATGATCATTTTACGA+TGG | + | chr2_2:28751325-28751344 | Msa0246930:intron | 30.0% |
| ! | TATATGCCCATAACTTGTAT+GGG | - | chr2_2:28751352-28751371 | None:intergenic | 30.0% |
| ! | TTATATGCCCATAACTTGTA+TGG | - | chr2_2:28751353-28751372 | None:intergenic | 30.0% |
| !! | TCATACTCTCTACTTTTGTA+TGG | + | chr2_2:28751795-28751814 | Msa0246930:intron | 30.0% |
| CATGTCTTCATAAACTTAGT+TGG | - | chr2_2:28751896-28751915 | None:intergenic | 30.0% | |
| !! | TTGTTCTTAGCATCACTTTT+CGG | + | chr2_2:28751982-28752001 | Msa0246930:intron | 30.0% |
| TAAAGCCTTTGATAGGTATA+AGG | - | chr2_2:28752087-28752106 | None:intergenic | 30.0% | |
| !!! | CAAAGGCTTTATTTTAAGTC+TGG | + | chr2_2:28752096-28752115 | Msa0246930:intron | 30.0% |
| AGTACATTGCACAAATTGAA+AGG | - | chr2_2:28752218-28752237 | None:intergenic | 30.0% | |
| TAATAACCATACTTGACCTT+AGG | + | chr2_2:28752362-28752381 | Msa0246930:intron | 30.0% | |
| CCCGGCTTAATTAAATTAAT+AGG | + | chr2_2:28752581-28752600 | Msa0246930:intron | 30.0% | |
| ACTCATTTATTAAACGAGCT+AGG | + | chr2_2:28752626-28752645 | Msa0246930:intron | 30.0% | |
| TTTAAAAAGTGATTAGGGGT+GGG | - | chr2_2:28752710-28752729 | None:intergenic | 30.0% | |
| !! | TTTTAAAAAGTGATTAGGGG+TGG | - | chr2_2:28752711-28752730 | None:intergenic | 30.0% |
| TTATAAGCCCAATTAGTAGT+GGG | - | chr2_2:28752791-28752810 | None:intergenic | 30.0% | |
| TTTATAAGCCCAATTAGTAG+TGG | - | chr2_2:28752792-28752811 | None:intergenic | 30.0% | |
| !! | TCACATATAAATGGGTTGAA+GGG | - | chr2_2:28752830-28752849 | None:intergenic | 30.0% |
| !! | ATCACATATAAATGGGTTGA+AGG | - | chr2_2:28752831-28752850 | None:intergenic | 30.0% |
| GTGGAACATCACATATAAAT+GGG | - | chr2_2:28752838-28752857 | None:intergenic | 30.0% | |
| ATTTATATGTGATGTTCCAC+CGG | + | chr2_2:28752838-28752857 | Msa0246930:intron | 30.0% | |
| CTAAAACTAGAGTTGTCAAA+TGG | - | chr2_2:28752890-28752909 | None:intergenic | 30.0% | |
| TGTGTCAATTGTTAATTGAG+TGG | - | chr2_2:28753656-28753675 | None:intergenic | 30.0% | |
| AGCTATGATTTATTTGTGAC+AGG | + | chr2_2:28754013-28754032 | Msa0246930:intron | 30.0% | |
| GCTATGATTTATTTGTGACA+GGG | + | chr2_2:28754014-28754033 | Msa0246930:intron | 30.0% | |
| CTATGATTTATTTGTGACAG+GGG | + | chr2_2:28754015-28754034 | Msa0246930:intron | 30.0% | |
| AAATTTGTGAAGATTTGGGT+TGG | + | chr2_2:28754277-28754296 | Msa0246930:CDS | 30.0% | |
| TAAAGACAACCCACCAATTA+TGG | + | chr2_2:28748482-28748501 | Msa0246930:CDS | 35.0% | |
| TTCTTGACACCATAATTGGT+GGG | - | chr2_2:28748494-28748513 | None:intergenic | 35.0% | |
| ATTCTTGACACCATAATTGG+TGG | - | chr2_2:28748495-28748514 | None:intergenic | 35.0% | |
| CCAATTCTTGACACCATAAT+TGG | - | chr2_2:28748498-28748517 | None:intergenic | 35.0% | |
| ! | CCAATTATGGTGTCAAGAAT+TGG | + | chr2_2:28748495-28748514 | Msa0246930:CDS | 35.0% |
| GTGTCAAGAATTGGTATCAT+AGG | + | chr2_2:28748504-28748523 | Msa0246930:CDS | 35.0% | |
| !! | GTGTGATAGTTGTTTTGCTA+CGG | - | chr2_2:28748550-28748569 | None:intergenic | 35.0% |
| CAGTGGCTTCAAAAACAATA+GGG | - | chr2_2:28748578-28748597 | None:intergenic | 35.0% | |
| TCAGTGGCTTCAAAAACAAT+AGG | - | chr2_2:28748579-28748598 | None:intergenic | 35.0% | |
| !! | TTTGAAGCCACTGATTCAAT+TGG | + | chr2_2:28748585-28748604 | Msa0246930:CDS | 35.0% |
| TTTGGAGACATTGTTCCTAT+AGG | + | chr2_2:28748613-28748632 | Msa0246930:CDS | 35.0% | |
| TTGAAGCTTAGTACACCTAT+AGG | - | chr2_2:28748631-28748650 | None:intergenic | 35.0% | |
| CTAAGCTTCAATCACAAACA+TGG | + | chr2_2:28748640-28748659 | Msa0246930:CDS | 35.0% | |
| TGTTAAGTTCAACACCAAAG+TGG | + | chr2_2:28748779-28748798 | Msa0246930:CDS | 35.0% | |
| ! | GGTTGAAATCAAGTTTGTTC+GGG | + | chr2_2:28748800-28748819 | Msa0246930:CDS | 35.0% |
| GGGGAATATTATGCAAGAAA+TGG | + | chr2_2:28749249-28749268 | Msa0246930:intron | 35.0% | |
| TTAAAGGCTATGCTGTTGTT+AGG | - | chr2_2:28749290-28749309 | None:intergenic | 35.0% | |
| !! | ATCAGCTATTGATTTAGCCA+TGG | + | chr2_2:28749585-28749604 | Msa0246930:CDS | 35.0% |
| AACCATGCACAATGATCATA+AGG | + | chr2_2:28750006-28750025 | Msa0246930:CDS | 35.0% | |
| TGATCATAAGGAGTTTGCAT+TGG | + | chr2_2:28750018-28750037 | Msa0246930:CDS | 35.0% | |
| ATTGGACACTTCCACATTAT+AGG | + | chr2_2:28750036-28750055 | Msa0246930:CDS | 35.0% | |
| ACTTCCACATTATAGGATGT+GGG | + | chr2_2:28750043-28750062 | Msa0246930:CDS | 35.0% | |
| GTTGCGTAGAACATGAAAAA+TGG | - | chr2_2:28750074-28750093 | None:intergenic | 35.0% | |
| !! | CTTTTAAGTAAACCCTGGTT+TGG | - | chr2_2:28750125-28750144 | None:intergenic | 35.0% |
| !! | AAAGGCTTTTAAGTAAACCC+TGG | - | chr2_2:28750130-28750149 | None:intergenic | 35.0% |
| ! | GAGATAATAGGAGGCATAAA+AGG | - | chr2_2:28750148-28750167 | None:intergenic | 35.0% |
| ATACCATTGGAGATAATAGG+AGG | - | chr2_2:28750157-28750176 | None:intergenic | 35.0% | |
| ATCTGTGATCCAAACTACTA+CGG | + | chr2_2:28750527-28750546 | Msa0246930:intron | 35.0% | |
| TTCAACCCATACTTCTCTAA+TGG | - | chr2_2:28750804-28750823 | None:intergenic | 35.0% | |
| GATGCAAAATCTTCCTGAAA+AGG | - | chr2_2:28750837-28750856 | None:intergenic | 35.0% | |
| !!! | ACCAGAGAGTTTTTTCAATG+AGG | + | chr2_2:28750875-28750894 | Msa0246930:CDS | 35.0% |
| TTCTTGCAACTGGTTATGAT+GGG | + | chr2_2:28751000-28751019 | Msa0246930:CDS | 35.0% | |
| ! | GTTTTGCTGAGTATGTTGAA+TGG | - | chr2_2:28751423-28751442 | None:intergenic | 35.0% |
| !!! | TTTCATGCTTTTTTACGGTC+CGG | - | chr2_2:28751583-28751602 | None:intergenic | 35.0% |
| !! | ACCAGGCCTATATTTTTCAA+GGG | + | chr2_2:28751632-28751651 | Msa0246930:intron | 35.0% |
| !!! | GCCTATATTTTTCAAGGGTT+GGG | + | chr2_2:28751637-28751656 | Msa0246930:intron | 35.0% |
| ACCCAACCCTTGAAAAATAT+AGG | - | chr2_2:28751641-28751660 | None:intergenic | 35.0% | |
| !!! | ATATTTTTCAAGGGTTGGGT+CGG | + | chr2_2:28751641-28751660 | Msa0246930:intron | 35.0% |
| !! | TGTTCTTAGCATCACTTTTC+GGG | + | chr2_2:28751983-28752002 | Msa0246930:intron | 35.0% |
| AGGCCTAGTTGAAAAAACTA+AGG | + | chr2_2:28752049-28752068 | Msa0246930:intron | 35.0% | |
| !!! | AGGCCTTAGTTTTTTCAACT+AGG | - | chr2_2:28752055-28752074 | None:intergenic | 35.0% |
| !!! | CTTTTTTATAAGCCTAAGCC+CGG | + | chr2_2:28752563-28752582 | Msa0246930:intron | 35.0% |
| AATTTAATTAAGCCGGGCTT+AGG | - | chr2_2:28752578-28752597 | None:intergenic | 35.0% | |
| TTGTATAGCCCACTACTAAT+TGG | + | chr2_2:28752780-28752799 | Msa0246930:intron | 35.0% | |
| TGTATAGCCCACTACTAATT+GGG | + | chr2_2:28752781-28752800 | Msa0246930:intron | 35.0% | |
| !! | ACATATAAATGGGTTGAAGG+GGG | - | chr2_2:28752828-28752847 | None:intergenic | 35.0% |
| !! | CACATATAAATGGGTTGAAG+GGG | - | chr2_2:28752829-28752848 | None:intergenic | 35.0% |
| GGTGGAACATCACATATAAA+TGG | - | chr2_2:28752839-28752858 | None:intergenic | 35.0% | |
| TTTATATGTGATGTTCCACC+GGG | + | chr2_2:28752839-28752858 | Msa0246930:intron | 35.0% | |
| TGACTATTCACTCTCAACTA+TGG | - | chr2_2:28753993-28754012 | None:intergenic | 35.0% | |
| !! | TCATCCATTGATTCCAAACA+TGG | + | chr2_2:28754044-28754063 | Msa0246930:CDS | 35.0% |
| AATGCTCTCACAAACCATTA+AGG | + | chr2_2:28754176-28754195 | Msa0246930:CDS | 35.0% | |
| GAGGAAGAAGAACTTGATTA+AGG | + | chr2_2:28754308-28754327 | Msa0246930:CDS | 35.0% | |
| GAAGAAGAACTTGATTAAGG+AGG | + | chr2_2:28754311-28754330 | Msa0246930:CDS | 35.0% | |
| GGTTGTCTTTAGTCAGCATA+GGG | - | chr2_2:28748473-28748492 | None:intergenic | 40.0% | |
| AGAATTGGTATCATAGGTGC+TGG | + | chr2_2:28748510-28748529 | Msa0246930:CDS | 40.0% | |
| AACACCACCAATTGAATCAG+TGG | - | chr2_2:28748595-28748614 | None:intergenic | 40.0% | |
| !! | CTGATTCAATTGGTGGTGTT+TGG | + | chr2_2:28748595-28748614 | Msa0246930:CDS | 40.0% |
| TACTTTCTCTTTCAGGCCAA+GGG | - | chr2_2:28748686-28748705 | None:intergenic | 40.0% | |
| TTACTTTCTCTTTCAGGCCA+AGG | - | chr2_2:28748687-28748706 | None:intergenic | 40.0% | |
| ! | AAGTTTGTTCGGGACAAAGA+AGG | + | chr2_2:28748810-28748829 | Msa0246930:CDS | 40.0% |
| TAATGAATCAGACGCCATTC+AGG | + | chr2_2:28748911-28748930 | Msa0246930:CDS | 40.0% | |
| ! | GGTATTGTTTGTCCCTTTTC+AGG | + | chr2_2:28749134-28749153 | Msa0246930:intron | 40.0% |
| ! | GTACTACTTCGAGTTTGTAG+TGG | + | chr2_2:28749390-28749409 | Msa0246930:CDS | 40.0% |
| ! | GTGGTTTGCACTGGAAAATA+TGG | + | chr2_2:28749409-28749428 | Msa0246930:CDS | 40.0% |
| CATGGAAATGTTGGCATCAA+TGG | - | chr2_2:28749442-28749461 | None:intergenic | 40.0% | |
| CCAACATTTCCATGCAACAA+GGG | + | chr2_2:28749448-28749467 | Msa0246930:CDS | 40.0% | |
| AGCTACTAGTGACCTTGTTA+AGG | + | chr2_2:28749531-28749550 | Msa0246930:CDS | 40.0% | |
| GCTACTAGTGACCTTGTTAA+GGG | + | chr2_2:28749532-28749551 | Msa0246930:CDS | 40.0% | |
| TGACCTTGTTAAGGGAAAGA+AGG | + | chr2_2:28749540-28749559 | Msa0246930:CDS | 40.0% | |
| CAACCTTCTTTCCCTTAACA+AGG | - | chr2_2:28749546-28749565 | None:intergenic | 40.0% | |
| TGTTAAGGGAAAGAAGGTTG+TGG | + | chr2_2:28749546-28749565 | Msa0246930:CDS | 40.0% | |
| !! | ACTTGTTATGAAGGACCTGA+AGG | + | chr2_2:28749981-28750000 | Msa0246930:intron | 40.0% |
| ! | CTTGTTATGAAGGACCTGAA+GGG | + | chr2_2:28749982-28750001 | Msa0246930:intron | 40.0% |
| CTCCTTATGATCATTGTGCA+TGG | - | chr2_2:28750011-28750030 | None:intergenic | 40.0% | |
| CACTTCCACATTATAGGATG+TGG | + | chr2_2:28750042-28750061 | Msa0246930:CDS | 40.0% | |
| CTTCCACATTATAGGATGTG+GGG | + | chr2_2:28750044-28750063 | Msa0246930:CDS | 40.0% | |
| ATGCCTCCTATTATCTCCAA+TGG | + | chr2_2:28750151-28750170 | Msa0246930:CDS | 40.0% | |
| TGATACTTTGAGCCGTCTAA+TGG | + | chr2_2:28750503-28750522 | Msa0246930:intron | 40.0% | |
| GATACTTTGAGCCGTCTAAT+GGG | + | chr2_2:28750504-28750523 | Msa0246930:intron | 40.0% | |
| TCATAGAGTCCTACTTACTG+TGG | + | chr2_2:28750772-28750791 | Msa0246930:CDS | 40.0% | |
| TGGAAGTTTCCACAGTAAGT+AGG | - | chr2_2:28750784-28750803 | None:intergenic | 40.0% | |
| GCCTCATTGAAAAAACTCTC+TGG | - | chr2_2:28750879-28750898 | None:intergenic | 40.0% | |
| !! | TCTTCAAGAGAGCATCAAAG+TGG | + | chr2_2:28750916-28750935 | Msa0246930:CDS | 40.0% |
| !!! | TCAAAGTGGTGGTTTTGGAA+TGG | + | chr2_2:28750930-28750949 | Msa0246930:CDS | 40.0% |
| GATGTTGTTCTTCTTGCAAC+TGG | + | chr2_2:28750990-28751009 | Msa0246930:CDS | 40.0% | |
| CTTCTTGCAACTGGTTATGA+TGG | + | chr2_2:28750999-28751018 | Msa0246930:CDS | 40.0% | |
| ! | AGAAAAAGGCTCTGGCAAAA+TGG | - | chr2_2:28751042-28751061 | None:intergenic | 40.0% |
| AACAAGCTAGAAAAAGGCTC+TGG | - | chr2_2:28751050-28751069 | None:intergenic | 40.0% | |
| !!! | AGAGCCTTTTTCTAGCTTGT+TGG | + | chr2_2:28751049-28751068 | Msa0246930:CDS | 40.0% |
| ACAATGGCATGATACCAGTA+GGG | - | chr2_2:28751079-28751098 | None:intergenic | 40.0% | |
| TACAATGGCATGATACCAGT+AGG | - | chr2_2:28751080-28751099 | None:intergenic | 40.0% | |
| GATGGACCCATACAAGTTAT+GGG | + | chr2_2:28751343-28751362 | Msa0246930:intron | 40.0% | |
| TGCTGAGTATGTTGAATGGA+GGG | - | chr2_2:28751419-28751438 | None:intergenic | 40.0% | |
| TTGCTGAGTATGTTGAATGG+AGG | - | chr2_2:28751420-28751439 | None:intergenic | 40.0% | |
| ATAGAGCTGTCAAAATGTGC+CGG | + | chr2_2:28751516-28751535 | Msa0246930:intron | 40.0% | |
| !! | GTACTAAAATAGTGGGTCGA+GGG | - | chr2_2:28751557-28751576 | None:intergenic | 40.0% |
| !! | TGTACTAAAATAGTGGGTCG+AGG | - | chr2_2:28751558-28751577 | None:intergenic | 40.0% |
| CCGGACTGTACTAAAATAGT+GGG | - | chr2_2:28751564-28751583 | None:intergenic | 40.0% | |
| !!! | CCCACTATTTTAGTACAGTC+CGG | + | chr2_2:28751561-28751580 | Msa0246930:intron | 40.0% |
| TCCGGACTGTACTAAAATAG+TGG | - | chr2_2:28751565-28751584 | None:intergenic | 40.0% | |
| !!! | TGATCCTATCTTTTTGGGTC+AGG | + | chr2_2:28751607-28751626 | Msa0246930:intron | 40.0% |
| CTTGAAAAATATAGGCCTGG+TGG | - | chr2_2:28751633-28751652 | None:intergenic | 40.0% | |
| ! | CACCAGGCCTATATTTTTCA+AGG | + | chr2_2:28751631-28751650 | Msa0246930:intron | 40.0% |
| ACCCTTGAAAAATATAGGCC+TGG | - | chr2_2:28751636-28751655 | None:intergenic | 40.0% | |
| !!! | GGCCTATATTTTTCAAGGGT+TGG | + | chr2_2:28751636-28751655 | Msa0246930:intron | 40.0% |
| !!! | TATTTTTCAAGGGTTGGGTC+GGG | + | chr2_2:28751642-28751661 | Msa0246930:intron | 40.0% |
| !! | GTTCTTAGCATCACTTTTCG+GGG | + | chr2_2:28751984-28752003 | Msa0246930:intron | 40.0% |
| TAGCCTATTTATGCAAAGCC+CGG | - | chr2_2:28752030-28752049 | None:intergenic | 40.0% | |
| AAAAACTAAGGCCTAAGCCT+TGG | + | chr2_2:28752061-28752080 | Msa0246930:intron | 40.0% | |
| CTTTGATAGGTATAAGGCCA+AGG | - | chr2_2:28752081-28752100 | None:intergenic | 40.0% | |
| !! | CTTGGCCTTATACCTATCAA+AGG | + | chr2_2:28752079-28752098 | Msa0246930:intron | 40.0% |
| !!! | GCTTTATTTTAAGTCTGGCC+TGG | + | chr2_2:28752101-28752120 | Msa0246930:intron | 40.0% |
| ! | AGGCTTTTAGACAGGCTAAT+AGG | - | chr2_2:28752149-28752168 | None:intergenic | 40.0% |
| ! | CACAAACTAGGCTTTTAGAC+AGG | - | chr2_2:28752157-28752176 | None:intergenic | 40.0% |
| GATATGCCTAAGGTCAAGTA+TGG | - | chr2_2:28752371-28752390 | None:intergenic | 40.0% | |
| ! | GTTTGCTACTGATATGCCTA+AGG | - | chr2_2:28752381-28752400 | None:intergenic | 40.0% |
| AAAAGCCTATCAAGCCTATC+AGG | - | chr2_2:28752548-28752567 | None:intergenic | 40.0% | |
| !!! | TTTTGAAATAAGGGTTGGGC+CGG | + | chr2_2:28752748-28752767 | Msa0246930:intron | 40.0% |
| ACTAGAGTTGTCAAATGGAC+CGG | - | chr2_2:28752885-28752904 | None:intergenic | 40.0% | |
| ! | TTGGGGTTTGATAGCTCAAT+TGG | - | chr2_2:28753857-28753876 | None:intergenic | 40.0% |
| ! | AAGGCCATGTTTGGAATCAA+TGG | - | chr2_2:28754051-28754070 | None:intergenic | 40.0% |
| ATTCCAAACATGGCCTTTGT+GGG | + | chr2_2:28754054-28754073 | Msa0246930:CDS | 40.0% | |
| ACTCTCAACATAACCCACAA+AGG | - | chr2_2:28754070-28754089 | None:intergenic | 40.0% | |
| CTCACAAACCATTAAGGACA+TGG | + | chr2_2:28754182-28754201 | Msa0246930:CDS | 40.0% | |
| CATTGCTTCCATGTCCTTAA+TGG | - | chr2_2:28754193-28754212 | None:intergenic | 40.0% | |
| ! | AGGAACTGCATCACAACTTT+TGG | + | chr2_2:28754237-28754256 | Msa0246930:CDS | 40.0% |
| !! | AAGATTTGGGTTGGCATACT+TGG | + | chr2_2:28754286-28754305 | Msa0246930:CDS | 40.0% |
| TTATAGTCAGCAGCAGTGTA+AGG | - | chr2_2:28754345-28754364 | None:intergenic | 40.0% | |
| GGGTTGTCTTTAGTCAGCAT+AGG | - | chr2_2:28748474-28748493 | None:intergenic | 45.0% | |
| !! | GAAGCCACTGATTCAATTGG+TGG | + | chr2_2:28748588-28748607 | Msa0246930:CDS | 45.0% |
| CCAAAATCTCAGCGTGAGAA+GGG | - | chr2_2:28748716-28748735 | None:intergenic | 45.0% | |
| TCCAAAATCTCAGCGTGAGA+AGG | - | chr2_2:28748717-28748736 | None:intergenic | 45.0% | |
| !! | TTTGATTTTGGACGCCTACC+TGG | + | chr2_2:28748834-28748853 | Msa0246930:CDS | 45.0% |
| AAAGGATTTCCATGGTCACC+AGG | - | chr2_2:28748855-28748874 | None:intergenic | 45.0% | |
| GTTCAGGCAAAGGATTTCCA+TGG | - | chr2_2:28748863-28748882 | None:intergenic | 45.0% | |
| AAATCCTTTGCCTGAACGTC+CGG | + | chr2_2:28748866-28748885 | Msa0246930:CDS | 45.0% | |
| TGAACAGAAAGCTCCCATAC+CGG | - | chr2_2:28748888-28748907 | None:intergenic | 45.0% | |
| CAAGGAAGGACACCTGAAAA+GGG | - | chr2_2:28749149-28749168 | None:intergenic | 45.0% | |
| ACAAGGAAGGACACCTGAAA+AGG | - | chr2_2:28749150-28749169 | None:intergenic | 45.0% | |
| ! | GAGTTTGTAGTGGTTTGCAC+TGG | + | chr2_2:28749400-28749419 | Msa0246930:CDS | 45.0% |
| GCCAACATTTCCATGCAACA+AGG | + | chr2_2:28749447-28749466 | Msa0246930:CDS | 45.0% | |
| CCCTTGTTGCATGGAAATGT+TGG | - | chr2_2:28749451-28749470 | None:intergenic | 45.0% | |
| GGAAAGAAGGTTGTGGTTGT+GGG | + | chr2_2:28749553-28749572 | Msa0246930:CDS | 45.0% | |
| TTTAGCCATGGAGTGTGTAC+AGG | + | chr2_2:28749597-28749616 | Msa0246930:CDS | 45.0% | |
| ACTCCCCACATCCTATAATG+TGG | - | chr2_2:28750050-28750069 | None:intergenic | 45.0% | |
| CTTCACCATACACCAAACCA+GGG | + | chr2_2:28750110-28750129 | Msa0246930:CDS | 45.0% | |
| !! | GTAAACCCTGGTTTGGTGTA+TGG | - | chr2_2:28750118-28750137 | None:intergenic | 45.0% |
| GATGAACCTAGTTCGATCGT+AGG | + | chr2_2:28750370-28750389 | Msa0246930:intron | 45.0% | |
| TTGACTCCTACGATCGAACT+AGG | - | chr2_2:28750379-28750398 | None:intergenic | 45.0% | |
| GGATCACAGATCCCATTAGA+CGG | - | chr2_2:28750518-28750537 | None:intergenic | 45.0% | |
| ! | GAAACCAGAACACCCTTTTC+AGG | + | chr2_2:28750821-28750840 | Msa0246930:CDS | 45.0% |
| !! | TCTTCCTGAAAAGGGTGTTC+TGG | - | chr2_2:28750828-28750847 | None:intergenic | 45.0% |
| !! | TCAAGAGAGCATCAAAGTGG+TGG | + | chr2_2:28750919-28750938 | Msa0246930:CDS | 45.0% |
| ! | GAGCATCAAAGTGGTGGTTT+TGG | + | chr2_2:28750925-28750944 | Msa0246930:CDS | 45.0% |
| !!! | AAGTGGTGGTTTTGGAATGG+AGG | + | chr2_2:28750933-28750952 | Msa0246930:CDS | 45.0% |
| !! | AGCTTGTTGGAATACCCTAC+TGG | + | chr2_2:28751062-28751081 | Msa0246930:CDS | 45.0% |
| CTGGTATCATGCCATTGTAC+AGG | + | chr2_2:28751081-28751100 | Msa0246930:CDS | 45.0% | |
| CGATGGACCCATACAAGTTA+TGG | + | chr2_2:28751342-28751361 | Msa0246930:intron | 45.0% | |
| GCTGAGTATGTTGAATGGAG+GGG | - | chr2_2:28751418-28751437 | None:intergenic | 45.0% | |
| !! | TTAGCATCACTTTTCGGGGT+GGG | + | chr2_2:28751988-28752007 | Msa0246930:intron | 45.0% |
| TATTTATGCAAAGCCCGGCT+CGG | - | chr2_2:28752025-28752044 | None:intergenic | 45.0% | |
| GGGCTTTGCATAAATAGGCT+AGG | + | chr2_2:28752029-28752048 | Msa0246930:intron | 45.0% | |
| TAGGTATAAGGCCAAGGCTT+AGG | - | chr2_2:28752075-28752094 | None:intergenic | 45.0% | |
| !! | GCCTTTTTAAAAGCCTGGCT+TGG | + | chr2_2:28752123-28752142 | Msa0246930:intron | 45.0% |
| !! | GCCAAGCCAGGCTTTTAAAA+AGG | - | chr2_2:28752127-28752146 | None:intergenic | 45.0% |
| AAGTGATTAGGGGTGGGAAT+AGG | - | chr2_2:28752704-28752723 | None:intergenic | 45.0% | |
| !! | ATAAATGGGTTGAAGGGGGT+CGG | - | chr2_2:28752824-28752843 | None:intergenic | 45.0% |
| GATTCCAAACATGGCCTTTG+TGG | + | chr2_2:28754053-28754072 | Msa0246930:CDS | 45.0% | |
| TAACCCACAAAGGCCATGTT+TGG | - | chr2_2:28754060-28754079 | None:intergenic | 45.0% | |
| AAGCCACATGGAACGTATCT+CGG | - | chr2_2:28754112-28754131 | None:intergenic | 45.0% | |
| TAATAGACCAGCAAGCCACA+TGG | - | chr2_2:28754124-28754143 | None:intergenic | 45.0% | |
| !!! | GAGAGCATTTTCTCAGCACT+TGG | - | chr2_2:28754165-28754184 | None:intergenic | 45.0% |
| !! | ATTTGGGTTGGCATACTTGG+AGG | + | chr2_2:28754289-28754308 | Msa0246930:CDS | 45.0% |
| ! | CACTGCTGCTGACTATAAGA+AGG | + | chr2_2:28754347-28754366 | Msa0246930:CDS | 45.0% |
| !!! | ATTTTTTTTAACAATATTAT+AGG | - | chr2_2:28748981-28749000 | None:intergenic | 5.0% |
| !! | AAAAAATAAAATCTTATTAT+AGG | + | chr2_2:28749228-28749247 | Msa0246930:intron | 5.0% |
| !! | AAAAATAAAATCTTATTATA+GGG | + | chr2_2:28749229-28749248 | Msa0246930:intron | 5.0% |
| !! | TAAATGATAAAATAATATTT+AGG | + | chr2_2:28753916-28753935 | Msa0246930:intron | 5.0% |
| !! | ATCATAGGTGCTGGAGTGAG+TGG | + | chr2_2:28748519-28748538 | Msa0246930:CDS | 50.0% |
| ! | CCCTTCTCACGCTGAGATTT+TGG | + | chr2_2:28748713-28748732 | Msa0246930:CDS | 50.0% |
| GATTTCCATGGTCACCAGGT+AGG | - | chr2_2:28748851-28748870 | None:intergenic | 50.0% | |
| TTTGCCTGAACGTCCGGTAT+GGG | + | chr2_2:28748872-28748891 | Msa0246930:CDS | 50.0% | |
| ! | AAGGGACCTGAGGTGTTCAA+GGG | + | chr2_2:28749466-28749485 | Msa0246930:CDS | 50.0% |
| ! | ACCTGAGGTGTTCAAGGGTA+AGG | + | chr2_2:28749471-28749490 | Msa0246930:CDS | 50.0% |
| ACCTTACCCTTGAACACCTC+AGG | - | chr2_2:28749475-28749494 | None:intergenic | 50.0% | |
| GGGAAAGAAGGTTGTGGTTG+TGG | + | chr2_2:28749552-28749571 | Msa0246930:CDS | 50.0% | |
| GTTTGCCTGTACACACTCCA+TGG | - | chr2_2:28749605-28749624 | None:intergenic | 50.0% | |
| GAGTGTGTACAGGCAAACCA+AGG | + | chr2_2:28749607-28749626 | Msa0246930:CDS | 50.0% | |
| ATTGTGCATGGTTGCCCTTC+AGG | - | chr2_2:28749999-28750018 | None:intergenic | 50.0% | |
| !! | CCTGGTTTGGTGTATGGTGA+AGG | - | chr2_2:28750112-28750131 | None:intergenic | 50.0% |
| CCTTCACCATACACCAAACC+AGG | + | chr2_2:28750109-28750128 | Msa0246930:CDS | 50.0% | |
| GTATGTTGAATGGAGGGGCA+TGG | - | chr2_2:28751413-28751432 | None:intergenic | 50.0% | |
| TCAAAATGTGCCGGACCGAT+CGG | + | chr2_2:28751525-28751544 | Msa0246930:intron | 50.0% | |
| !! | AAAATAGTGGGTCGAGGGTC+CGG | - | chr2_2:28751552-28751571 | None:intergenic | 50.0% |
| GTGGCCTGACCCAAAAAGAT+AGG | - | chr2_2:28751614-28751633 | None:intergenic | 50.0% | |
| !! | CTTAGCATCACTTTTCGGGG+TGG | + | chr2_2:28751987-28752006 | Msa0246930:intron | 50.0% |
| GAGCCGGGCTTTGCATAAAT+AGG | + | chr2_2:28752024-28752043 | Msa0246930:intron | 50.0% | |
| !! | GCCTGGCCTTTTTAAAAGCC+TGG | + | chr2_2:28752118-28752137 | Msa0246930:intron | 50.0% |
| !! | GCCAGGCTTTTAAAAAGGCC+AGG | - | chr2_2:28752122-28752141 | None:intergenic | 50.0% |
| ! | CATATACGGGCTGACCTGAT+AGG | + | chr2_2:28752531-28752550 | Msa0246930:intron | 50.0% |
| GCTGACCTGATAGGCTTGAT+AGG | + | chr2_2:28752540-28752559 | Msa0246930:intron | 50.0% | |
| TTAAACGAGCTAGGCTGAGC+CGG | + | chr2_2:28752635-28752654 | Msa0246930:intron | 50.0% | |
| ! | CTTTTAGTAGGCCGAGCCAT+AGG | + | chr2_2:28752659-28752678 | Msa0246930:intron | 50.0% |
| !! | TAGTGGGCTATACAACGCGA+CGG | - | chr2_2:28752775-28752794 | None:intergenic | 50.0% |
| CATCCGAGATACGTTCCATG+TGG | + | chr2_2:28754106-28754125 | Msa0246930:CDS | 50.0% | |
| ! | ATACGTTCCATGTGGCTTGC+TGG | + | chr2_2:28754114-28754133 | Msa0246930:CDS | 50.0% |
| CATACCGGACGTTCAGGCAA+AGG | - | chr2_2:28748873-28748892 | None:intergenic | 55.0% | |
| CTTTGCCTGAACGTCCGGTA+TGG | + | chr2_2:28748871-28748890 | Msa0246930:CDS | 55.0% | |
| TCCATGCAACAAGGGACCTG+AGG | + | chr2_2:28749456-28749475 | Msa0246930:CDS | 55.0% | |
| ACCTCAGGTCCCTTGTTGCA+TGG | - | chr2_2:28749460-28749479 | None:intergenic | 55.0% | |
| ! | CAAGGGACCTGAGGTGTTCA+AGG | + | chr2_2:28749465-28749484 | Msa0246930:CDS | 55.0% |
| ! | TGAATGGAGGGGCATGGAAG+TGG | - | chr2_2:28751407-28751426 | None:intergenic | 55.0% |
| CAAAATGTGCCGGACCGATC+GGG | + | chr2_2:28751526-28751545 | Msa0246930:intron | 55.0% | |
| !!! | TCTTTTTGGGTCAGGCCACC+AGG | + | chr2_2:28751615-28751634 | Msa0246930:intron | 55.0% |
| !! | TTTTCGGGGTGGGAATGAGC+CGG | + | chr2_2:28751998-28752017 | Msa0246930:intron | 55.0% |
| ACAGGCTAATAGGCCAAGCC+AGG | - | chr2_2:28752139-28752158 | None:intergenic | 55.0% | |
| TAAACGAGCTAGGCTGAGCC+GGG | + | chr2_2:28752636-28752655 | Msa0246930:intron | 55.0% | |
| !! | AGTGGGCTATACAACGCGAC+GGG | - | chr2_2:28752774-28752793 | None:intergenic | 55.0% |
| ATGTGATGTTCCACCGGGTC+AGG | + | chr2_2:28752844-28752863 | Msa0246930:intron | 55.0% | |
| TGTGATGTTCCACCGGGTCA+GGG | + | chr2_2:28752845-28752864 | Msa0246930:intron | 55.0% | |
| AGCTCCCATACCGGACGTTC+AGG | - | chr2_2:28748879-28748898 | None:intergenic | 60.0% | |
| TTTCGGGGTGGGAATGAGCC+GGG | + | chr2_2:28751999-28752018 | Msa0246930:intron | 60.0% | |
| ! | GGCTGAGCCGGGCTTTTAGT+AGG | + | chr2_2:28752647-28752666 | Msa0246930:intron | 60.0% |
| GGCTCGGCCTACTAAAAGCC+CGG | - | chr2_2:28752657-28752676 | None:intergenic | 60.0% | |
| GGACGCCTACCTGGTGACCA+TGG | + | chr2_2:28748843-28748862 | Msa0246930:CDS | 65.0% | |
| TTGGGTCGGGCCAGCCAGTT+AGG | + | chr2_2:28751655-28751674 | Msa0246930:intron | 65.0% | |
| GGGCCAGCCAGTTAGGCTTG+CGG | + | chr2_2:28751662-28751681 | Msa0246930:intron | 65.0% | |
| GGCCAGCCAGTTAGGCTTGC+GGG | + | chr2_2:28751663-28751682 | Msa0246930:intron | 65.0% | |
| AGCCCGCAAGCCTAACTGGC+TGG | - | chr2_2:28751668-28751687 | None:intergenic | 65.0% | |
| GGCAAGCCCGCAAGCCTAAC+TGG | - | chr2_2:28751672-28751691 | None:intergenic | 65.0% | |
| ATAGGCCAAGCCGCCCGTCT+GGG | - | chr2_2:28752686-28752705 | None:intergenic | 65.0% | |
| AATAGGCCAAGCCGCCCGTC+TGG | - | chr2_2:28752687-28752706 | None:intergenic | 65.0% | |
| GGCTATACAACGCGACGGGC+CGG | - | chr2_2:28752770-28752789 | None:intergenic | 65.0% | |
| GATGTTCCACCGGGTCAGGG+CGG | + | chr2_2:28752848-28752867 | Msa0246930:intron | 65.0% | |
| ATGTTCCACCGGGTCAGGGC+GGG | + | chr2_2:28752849-28752868 | Msa0246930:intron | 65.0% | |
| ATGTGCCGGACCGATCGGGC+CGG | + | chr2_2:28751530-28751549 | Msa0246930:intron | 70.0% | |
| !! | ATGCAAAGCCCGGCTCGGCC+CGG | - | chr2_2:28752020-28752039 | None:intergenic | 70.0% |
| GCCGAGCCATAGGCCCCAGA+CGG | + | chr2_2:28752669-28752688 | Msa0246930:intron | 70.0% | |
| ! | CCCGTCTGGGGCCTATGGCT+CGG | - | chr2_2:28752673-28752692 | None:intergenic | 70.0% |
| CCGAGCCATAGGCCCCAGAC+GGG | + | chr2_2:28752670-28752689 | Msa0246930:intron | 70.0% | |
| AGCCATAGGCCCCAGACGGG+CGG | + | chr2_2:28752673-28752692 | Msa0246930:intron | 70.0% | |
| TAGGCCAAGCCGCCCGTCTG+GGG | - | chr2_2:28752685-28752704 | None:intergenic | 70.0% | |
| CGACCTAACCCGCCCTGACC+CGG | - | chr2_2:28752860-28752879 | None:intergenic | 70.0% | |
| !! | CAGGGCGGGTTAGGTCGAGC+CGG | + | chr2_2:28752863-28752882 | Msa0246930:intron | 70.0% |
| AGGGTCCGGCCCGATCGGTC+CGG | - | chr2_2:28751538-28751557 | None:intergenic | 75.0% | |
| GGTCGAGGGTCCGGCCCGAT+CGG | - | chr2_2:28751543-28751562 | None:intergenic | 75.0% | |
| GGGAATGAGCCGGGCCGAGC+CGG | + | chr2_2:28752008-28752027 | Msa0246930:intron | 75.0% | |
| GGAATGAGCCGGGCCGAGCC+GGG | + | chr2_2:28752009-28752028 | Msa0246930:intron | 75.0% | |
| ! | AGCCGCCCGTCTGGGGCCTA+TGG | - | chr2_2:28752678-28752697 | None:intergenic | 75.0% |
| TAGGCCCCAGACGGGCGGCT+TGG | + | chr2_2:28752678-28752697 | Msa0246930:intron | 75.0% | |
| CCTAACCCGCCCTGACCCGG+TGG | - | chr2_2:28752857-28752876 | None:intergenic | 75.0% | |
| ! | CCACCGGGTCAGGGCGGGTT+AGG | + | chr2_2:28752854-28752873 | Msa0246930:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 28748424 | 28754442 | 28748424 | ID=Msa0246930;Name=Msa0246930 |
| chr2_2 | mRNA | 28748424 | 28754442 | 28748424 | ID=Msa0246930-mRNA-1;Parent=Msa0246930;Name=Msa0246930-mRNA-1;_AED=0.05;_eAED=0.05;_QI=50|1|1|1|1|1|5|65|523 |
| chr2_2 | exon | 28748424 | 28748932 | 28748424 | ID=Msa0246930-mRNA-1:exon:10268;Parent=Msa0246930-mRNA-1 |
| chr2_2 | exon | 28749388 | 28749628 | 28749388 | ID=Msa0246930-mRNA-1:exon:10269;Parent=Msa0246930-mRNA-1 |
| chr2_2 | exon | 28749994 | 28750172 | 28749994 | ID=Msa0246930-mRNA-1:exon:10270;Parent=Msa0246930-mRNA-1 |
| chr2_2 | exon | 28750753 | 28751102 | 28750753 | ID=Msa0246930-mRNA-1:exon:10271;Parent=Msa0246930-mRNA-1 |
| chr2_2 | exon | 28754035 | 28754442 | 28754035 | ID=Msa0246930-mRNA-1:exon:10272;Parent=Msa0246930-mRNA-1 |
| chr2_2 | five_prime_UTR | 28748424 | 28748473 | 28748424 | ID=Msa0246930-mRNA-1:five_prime_utr;Parent=Msa0246930-mRNA-1 |
| chr2_2 | CDS | 28748474 | 28748932 | 28748474 | ID=Msa0246930-mRNA-1:cds;Parent=Msa0246930-mRNA-1 |
| chr2_2 | CDS | 28749388 | 28749628 | 28749388 | ID=Msa0246930-mRNA-1:cds;Parent=Msa0246930-mRNA-1 |
| chr2_2 | CDS | 28749994 | 28750172 | 28749994 | ID=Msa0246930-mRNA-1:cds;Parent=Msa0246930-mRNA-1 |
| chr2_2 | CDS | 28750753 | 28751102 | 28750753 | ID=Msa0246930-mRNA-1:cds;Parent=Msa0246930-mRNA-1 |
| chr2_2 | CDS | 28754035 | 28754377 | 28754035 | ID=Msa0246930-mRNA-1:cds;Parent=Msa0246930-mRNA-1 |
| chr2_2 | three_prime_UTR | 28754378 | 28754442 | 28754378 | ID=Msa0246930-mRNA-1:three_prime_utr;Parent=Msa0246930-mRNA-1 |
| Gene Sequence |
| Protein sequence |
