AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0208480

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0208480 MtrunA17_Chr2g0307291 97.115 520 15 0 1 520 1 520 0.0 1048
Msa0208480 MtrunA17_Chr2g0307301 95.000 520 26 0 1 520 1 520 0.0 1031
Msa0208480 MtrunA17_Chr2g0313751 69.038 520 159 1 1 520 28 545 0.0 775
Msa0208480 MtrunA17_Chr5g0446131 69.336 512 157 0 9 520 5 516 0.0 767
Msa0208480 MtrunA17_Chr2g0288661 68.462 520 164 0 1 520 1 520 0.0 764
Msa0208480 MtrunA17_Chr2g0313821 64.797 517 180 2 6 520 2 518 0.0 727
Msa0208480 MtrunA17_Chr2g0313761 69.138 499 154 0 22 520 15 513 0.0 720
Msa0208480 MtrunA17_Chr2g0313781 63.258 528 180 3 6 519 2 529 0.0 714
Msa0208480 MtrunA17_Chr2g0313801 63.760 516 185 2 6 519 2 517 0.0 708
Msa0208480 MtrunA17_Chr2g0313831 63.077 520 188 2 1 519 1 517 0.0 697
Msa0208480 MtrunA17_Chr2g0313791 62.791 516 185 3 6 519 2 512 0.0 697
Msa0208480 MtrunA17_Chr2g0313811 63.443 517 176 2 16 519 13 529 0.0 684
Msa0208480 MtrunA17_Chr2g0313771 53.565 519 233 5 6 518 7 523 0.0 589
Msa0208480 MtrunA17_Chr8g0354531 54.054 518 231 5 6 518 130 645 0.0 580
Msa0208480 MtrunA17_Chr8g0354571 53.654 520 234 5 5 518 6 524 0.0 578
Msa0208480 MtrunA17_Chr8g0354511 54.615 520 229 6 5 518 6 524 0.0 578
Msa0208480 MtrunA17_Chr4g0014051 50.291 515 251 5 7 518 16 528 0.0 535
Msa0208480 MtrunA17_Chr4g0063221 38.077 520 293 8 16 518 12 519 1.42e-122 369
Msa0208480 MtrunA17_Chr1g0193811 35.590 517 321 6 10 519 6 517 2.56e-112 343
Msa0208480 MtrunA17_Chr7g0262111 37.149 498 296 7 25 518 21 505 1.66e-106 327
Msa0208480 MtrunA17_Chr6g0457421 34.630 514 314 8 12 518 9 507 1.14e-105 325
Msa0208480 MtrunA17_Chr7g0215181 35.465 516 311 9 12 520 11 511 1.50e-103 320
Msa0208480 MtrunA17_Chr1g0154731 33.267 502 318 7 21 518 15 503 8.51e-101 312
Msa0208480 MtrunA17_Chr8g0354561 45.075 335 157 6 5 333 88 401 3.06e-91 284
Msa0208480 MtrunA17_Chr1g0203141 31.250 528 340 10 1 518 1 515 1.72e-88 281
Msa0208480 MtrunA17_Chr7g0235261 32.016 506 319 7 31 518 12 510 4.87e-88 280
Msa0208480 MtrunA17_Chr3g0128461 31.461 534 321 13 15 517 4 523 7.26e-86 274
Msa0208480 MtrunA17_Chr4g0004601 29.885 522 332 6 11 511 16 524 1.47e-85 274
Msa0208480 MtrunA17_Chr1g0203151 32.794 494 314 9 31 518 30 511 1.13e-84 271
Msa0208480 MtrunA17_Chr8g0364081 29.868 529 348 10 10 520 20 543 6.71e-79 257
Msa0208480 MtrunA17_Chr8g0336361 29.787 564 342 10 3 518 1 558 1.48e-78 256
Msa0208480 MtrunA17_Chr8g0354541 62.360 178 67 0 341 518 1 178 3.53e-78 243
Msa0208480 MtrunA17_Chr6g0479681 31.311 511 316 12 31 518 31 529 5.84e-78 254
Msa0208480 MtrunA17_Chr6g0472221 31.881 505 316 11 31 518 33 526 2.37e-77 252
Msa0208480 MtrunA17_Chr2g0307311 94.872 117 6 0 41 157 6 122 4.17e-74 231
Msa0208480 MtrunA17_Chr8g0362731 32.308 390 244 4 136 518 32 408 2.57e-71 233
Msa0208480 MtrunA17_Chr2g0308651 32.992 391 249 8 140 518 26 415 3.57e-67 223
Msa0208480 MtrunA17_Chr2g0307321 93.617 94 6 0 168 261 1 94 8.14e-57 185
Msa0208480 MtrunA17_Chr5g0396521 27.197 478 283 16 94 517 103 569 5.16e-42 158
Msa0208480 MtrunA17_Chr0c19g0493771 26.667 435 277 13 93 505 217 631 5.07e-39 151
Msa0208480 MtrunA17_Chr1g0179811 28.398 412 256 14 103 491 117 512 9.14e-38 145
Msa0208480 MtrunA17_Chr1g0182861 37.589 141 88 0 378 518 23 163 1.48e-34 127
Msa0208480 MtrunA17_Chr6g0472171 36.170 141 90 0 378 518 18 158 1.80e-34 127
Msa0208480 MtrunA17_Chr6g0472161 26.772 381 224 11 20 376 21 370 1.68e-29 119
Msa0208480 MtrunA17_Chr3g0108651 40.984 122 68 2 403 520 1 122 9.00e-26 102
Msa0208480 MtrunA17_Chr1g0162811 25.373 469 298 16 61 491 14 468 1.46e-25 110
Msa0208480 MtrunA17_Chr8g0351391 25.959 443 269 18 87 492 64 484 1.60e-25 109
Msa0208480 MtrunA17_Chr3g0119681 25.390 449 263 16 86 487 63 486 2.22e-25 109
Msa0208480 MtrunA17_Chr3g0101631 22.892 498 329 14 11 491 5 464 4.34e-25 108
Msa0208480 MtrunA17_Chr3g0101731 23.059 438 302 11 68 491 53 469 4.92e-25 108
Msa0208480 MtrunA17_Chr7g0248991 27.003 337 208 11 140 456 49 367 2.07e-24 104
Msa0208480 MtrunA17_Chr5g0445461 23.673 490 322 16 46 514 38 496 2.45e-24 106
Msa0208480 MtrunA17_Chr5g0403351 28.221 326 200 12 184 491 162 471 5.92e-24 105
Msa0208480 MtrunA17_Chr1g0204271 26.161 409 250 14 136 513 114 501 6.08e-24 105
Msa0208480 MtrunA17_Chr8g0351311 24.490 441 281 15 87 493 64 486 9.04e-24 104
Msa0208480 MtrunA17_Chr1g0164321 23.736 455 296 16 101 517 105 546 4.01e-23 102
Msa0208480 MtrunA17_Chr7g0260831 25.313 399 259 12 140 517 121 501 4.02e-23 102
Msa0208480 MtrunA17_Chr6g0449331 24.017 458 304 15 95 517 66 514 5.52e-23 102
Msa0208480 MtrunA17_Chr5g0446161 22.588 425 301 12 88 497 63 474 6.57e-23 102
Msa0208480 MtrunA17_Chr5g0403321 25.000 360 245 11 146 491 126 474 9.38e-23 101
Msa0208480 MtrunA17_Chr5g0443401 21.826 449 296 12 54 491 47 451 1.06e-22 101
Msa0208480 MtrunA17_Chr7g0225531 28.472 288 177 8 243 517 239 510 1.13e-22 101
Msa0208480 MtrunA17_Chr4g0058231 23.832 428 263 15 102 491 67 469 2.10e-22 100
Msa0208480 MtrunA17_Chr4g0067191 23.656 465 281 19 107 517 70 514 2.77e-22 100
Msa0208480 MtrunA17_Chr7g0218611 27.063 303 196 8 201 490 177 467 3.79e-22 99.8
Msa0208480 MtrunA17_Chr8g0351401 25.124 402 253 14 140 510 118 502 4.22e-22 99.8
Msa0208480 MtrunA17_Chr8g0351461 23.958 384 253 11 136 493 113 483 4.31e-22 99.4
Msa0208480 MtrunA17_Chr5g0403331 22.689 357 254 12 146 491 127 472 5.60e-22 99.0
Msa0208480 MtrunA17_Chr7g0246221 27.027 296 201 8 202 492 187 472 6.01e-22 99.0
Msa0208480 MtrunA17_Chr5g0445381 24.519 416 278 14 94 491 102 499 7.01e-22 99.0
Msa0208480 MtrunA17_Chr1g0184421 25.888 394 246 12 140 513 122 489 8.78e-22 98.6
Msa0208480 MtrunA17_Chr8g0380471 25.373 402 239 12 135 516 114 474 9.66e-22 98.2
Msa0208480 MtrunA17_Chr3g0101711 24.370 357 248 9 146 491 127 472 1.40e-21 97.8
Msa0208480 MtrunA17_Chr7g0260821 25.829 422 265 14 120 517 105 502 2.62e-21 97.1
Msa0208480 MtrunA17_Chr4g0058191 25.321 312 216 7 188 491 156 458 4.03e-21 96.3
Msa0208480 MtrunA17_Chr4g0038271 22.545 448 303 16 102 517 124 559 4.30e-21 96.7
Msa0208480 MtrunA17_Chr5g0446151 22.824 425 301 12 88 497 63 475 4.98e-21 96.3
Msa0208480 MtrunA17_Chr5g0445441 22.676 441 306 14 69 497 98 515 6.00e-21 96.3
Msa0208480 MtrunA17_Chr3g0101621 22.955 440 293 14 68 491 50 459 6.05e-21 95.9
Msa0208480 MtrunA17_Chr3g0101601 22.902 441 295 14 68 491 53 465 8.04e-21 95.5
Msa0208480 MtrunA17_Chr8g0334891 24.438 356 227 10 154 495 133 460 9.93e-21 95.1
Msa0208480 MtrunA17_Chr7g0218601 25.152 330 208 9 176 493 167 469 1.01e-20 95.1
Msa0208480 MtrunA17_Chr4g0020041 24.356 427 275 15 91 491 66 470 1.07e-20 95.1
Msa0208480 MtrunA17_Chr3g0116741 24.581 358 246 12 146 492 140 484 1.08e-20 95.1
Msa0208480 MtrunA17_Chr8g0351441 24.060 399 266 10 120 493 97 483 1.56e-20 94.7
Msa0208480 MtrunA17_Chr1g0182871 27.869 244 167 5 140 382 27 262 1.57e-20 91.3
Msa0208480 MtrunA17_Chr1g0184461 24.078 461 292 16 82 513 58 489 2.17e-20 94.4
Msa0208480 MtrunA17_Chr6g0449341 23.684 456 294 16 101 517 122 562 2.68e-20 94.4
Msa0208480 MtrunA17_Chr5g0445451 22.402 433 305 13 69 491 57 468 3.13e-20 94.0
Msa0208480 MtrunA17_Chr3g0101721 24.157 356 249 10 146 491 127 471 3.90e-20 93.6
Msa0208480 MtrunA17_Chr5g0443731 25.490 357 235 10 141 491 115 446 4.08e-20 93.2
Msa0208480 MtrunA17_Chr8g0334941 25.000 332 207 10 178 495 2 305 4.75e-20 91.3
Msa0208480 MtrunA17_Chr5g0405001 25.633 316 220 8 187 491 170 481 1.01e-19 92.4
Msa0208480 MtrunA17_Chr5g0431641 24.859 354 244 12 146 491 129 468 1.01e-19 92.0
Msa0208480 MtrunA17_Chr8g0351421 23.940 401 264 13 120 493 98 484 1.06e-19 92.0
Msa0208480 MtrunA17_Chr3g0101691 24.719 356 248 9 146 491 128 473 1.50e-19 91.7
Msa0208480 MtrunA17_Chr4g0047661 21.991 432 302 13 83 491 66 485 1.59e-19 91.7
Msa0208480 MtrunA17_Chr3g0101671 21.818 440 307 12 68 491 55 473 1.60e-19 91.7
Msa0208480 MtrunA17_Chr8g0357421 23.394 436 302 12 68 491 54 469 1.78e-19 91.7
Msa0208480 MtrunA17_Chr4g0035921 23.913 322 229 7 185 491 161 481 1.98e-19 91.3
Msa0208480 MtrunA17_Chr3g0101701 24.507 355 250 9 146 491 128 473 2.42e-19 91.3
Msa0208480 MtrunA17_Chr5g0431671 21.911 429 315 12 74 491 50 469 4.08e-19 90.5
Msa0208480 MtrunA17_Chr4g0024771 24.011 354 247 11 146 491 129 468 4.73e-19 90.1
Msa0208480 MtrunA17_Chr4g0047641 23.448 435 295 13 85 496 70 489 5.34e-19 90.1
Msa0208480 MtrunA17_Chr4g0047691 26.578 301 200 9 202 491 193 483 7.88e-19 89.7
Msa0208480 MtrunA17_Chr3g0116681 23.077 416 287 11 94 491 71 471 8.62e-19 89.4
Msa0208480 MtrunA17_Chr1g0162801 25.561 446 282 16 68 491 54 471 9.18e-19 89.4
Msa0208480 MtrunA17_Chr3g0101751 23.624 436 303 10 68 491 59 476 1.93e-18 88.2
Msa0208480 MtrunA17_Chr5g0445421 22.250 400 270 11 102 491 153 521 2.99e-18 87.8
Msa0208480 MtrunA17_Chr4g0052861 25.581 430 255 16 91 487 60 457 3.03e-18 87.8
Msa0208480 MtrunA17_Chr7g0224561 25.513 341 215 11 169 491 151 470 3.43e-18 87.4
Msa0208480 MtrunA17_Chr3g0101581 25.836 329 212 10 180 491 157 470 3.67e-18 87.4
Msa0208480 MtrunA17_Chr4g0058211 32.335 167 110 3 327 491 21 186 4.48e-18 83.2
Msa0208480 MtrunA17_Chr4g0058281 23.140 363 252 10 146 494 135 484 4.58e-18 87.0
Msa0208480 MtrunA17_Chr4g0047631 27.036 307 201 9 202 496 190 485 4.96e-18 87.0
Msa0208480 MtrunA17_Chr3g0101811 22.687 454 298 15 68 491 54 484 5.63e-18 87.0
Msa0208480 MtrunA17_Chr1g0163211 22.196 419 278 12 120 513 101 496 6.90e-18 86.7
Msa0208480 MtrunA17_Chr5g0431501 24.179 335 233 11 172 493 146 472 7.76e-18 86.3
Msa0208480 MtrunA17_Chr5g0431461 24.179 335 233 11 172 493 146 472 7.76e-18 86.3
Msa0208480 MtrunA17_Chr8g0357431 23.973 438 298 11 68 491 54 470 7.82e-18 86.3
Msa0208480 MtrunA17_Chr5g0445531 22.087 412 298 11 91 491 68 467 7.83e-18 86.3
Msa0208480 MtrunA17_Chr6g0463801 23.543 429 293 14 88 497 59 471 8.10e-18 86.3
Msa0208480 MtrunA17_Chr3g0101761 25.070 355 247 9 146 491 125 469 8.73e-18 86.3
Msa0208480 MtrunA17_Chr5g0429651 23.721 430 285 15 116 519 97 509 9.75e-18 86.3
Msa0208480 MtrunA17_Chr3g0101571 24.930 357 243 13 146 491 125 467 1.01e-17 85.9
Msa0208480 MtrunA17_Chr8g0387001 22.877 424 276 10 120 513 98 500 1.01e-17 86.3
Msa0208480 MtrunA17_Chr5g0431591 24.407 295 207 8 204 491 1 286 1.19e-17 84.0
Msa0208480 MtrunA17_Chr1g0167321 23.611 432 295 12 86 491 46 468 1.49e-17 85.5
Msa0208480 MtrunA17_Chr3g0101801 23.409 440 299 14 68 491 59 476 1.84e-17 85.1
Msa0208480 MtrunA17_Chr3g0101821 25.392 319 222 7 182 491 158 469 2.08e-17 85.1
Msa0208480 MtrunA17_Chr6g0449361 22.296 453 298 17 81 499 50 482 2.12e-17 85.1
Msa0208480 MtrunA17_Chr7g0224551 25.714 315 204 10 195 491 168 470 2.13e-17 85.1
Msa0208480 MtrunA17_Chr3g0101831 21.976 496 342 14 11 491 5 470 2.70e-17 84.7
Msa0208480 MtrunA17_Chr1g0151221 23.341 437 273 14 103 492 79 500 4.34e-17 84.3
Msa0208480 MtrunA17_Chr4g0076161 24.242 297 209 7 203 491 183 471 4.49e-17 84.0
Msa0208480 MtrunA17_Chr2g0321171 25.000 244 161 6 248 487 241 466 4.96e-17 84.0
Msa0208480 MtrunA17_Chr2g0334021 27.451 255 168 7 241 493 233 472 5.11e-17 84.0
Msa0208480 MtrunA17_Chr7g0265611 24.377 361 250 13 146 492 135 486 6.34e-17 83.6
Msa0208480 MtrunA17_Chr8g0377341 25.670 448 278 19 102 520 108 529 6.72e-17 83.6
Msa0208480 MtrunA17_Chr4g0004481 23.134 402 267 14 140 518 110 492 7.91e-17 83.2
Msa0208480 MtrunA17_Chr1g0163391 22.414 464 305 17 88 517 59 501 7.97e-17 83.2
Msa0208480 MtrunA17_Chr5g0395331 25.862 290 192 10 210 491 198 472 8.79e-17 83.2
Msa0208480 MtrunA17_Chr4g0011981 25.342 292 203 9 208 491 180 464 9.30e-17 83.2
Msa0208480 MtrunA17_Chr3g0101661 23.955 359 246 11 146 491 128 472 9.77e-17 83.2
Msa0208480 MtrunA17_Chr8g0390881 22.770 426 297 16 88 491 57 472 1.19e-16 82.8
Msa0208480 MtrunA17_Chr4g0058201 23.473 311 221 7 189 491 159 460 1.28e-16 82.4
Msa0208480 MtrunA17_Chr5g0419451 23.373 415 282 15 92 487 87 484 1.34e-16 82.8
Msa0208480 MtrunA17_Chr3g0101741 22.727 352 251 8 146 491 55 391 1.47e-16 82.0
Msa0208480 MtrunA17_Chr5g0395321 24.399 291 198 10 207 491 191 465 1.72e-16 82.4
Msa0208480 MtrunA17_Chr1g0205361 24.308 325 199 12 201 491 154 465 1.76e-16 82.0
Msa0208480 MtrunA17_Chr3g0104351 22.921 445 286 13 107 515 90 513 1.87e-16 82.0
Msa0208480 MtrunA17_Chr4g0011961 25.667 300 205 11 201 491 173 463 1.91e-16 82.0
Msa0208480 MtrunA17_Chr5g0446101 23.826 298 212 7 204 497 1 287 1.91e-16 80.5
Msa0208480 MtrunA17_Chr1g0160861 27.530 247 160 9 251 491 73 306 2.12e-16 80.5
Msa0208480 MtrunA17_Chr5g0430071 24.686 239 175 4 256 491 89 325 2.38e-16 80.9
Msa0208480 MtrunA17_Chr6g0449381 20.729 439 300 15 92 499 63 484 2.52e-16 81.6
Msa0208480 MtrunA17_Chr6g0463791 29.586 169 113 3 328 491 300 467 2.78e-16 81.6
Msa0208480 MtrunA17_Chr8g0351801 24.179 335 214 12 188 493 165 488 2.86e-16 81.6
Msa0208480 MtrunA17_Chr1g0160851 24.000 350 219 10 174 491 131 465 2.98e-16 81.3
Msa0208480 MtrunA17_Chr5g0430091 23.630 292 217 5 204 491 183 472 3.23e-16 81.3
Msa0208480 MtrunA17_Chr8g0390871 29.341 167 116 2 327 491 28 194 3.33e-16 78.2
Msa0208480 MtrunA17_Chr7g0227281 24.060 399 265 14 140 517 112 493 3.49e-16 81.3
Msa0208480 MtrunA17_Chr8g0361471 23.315 356 253 8 146 491 124 469 4.09e-16 80.9
Msa0208480 MtrunA17_Chr6g0466331 22.753 356 255 8 146 491 124 469 4.47e-16 80.9
Msa0208480 MtrunA17_Chr1g0197891 24.855 346 216 12 175 491 133 463 4.49e-16 80.9
Msa0208480 MtrunA17_Chr6g0465511 22.753 356 255 8 146 491 124 469 5.02e-16 80.9
Msa0208480 MtrunA17_Chr1g0156101 23.193 332 228 10 201 512 176 500 5.50e-16 80.5
Msa0208480 MtrunA17_Chr1g0197881 24.855 346 216 12 175 491 132 462 6.24e-16 80.5
Msa0208480 MtrunA17_Chr3g0078411 26.070 257 169 6 238 490 199 438 6.80e-16 80.1
Msa0208480 MtrunA17_Chr5g0419691 26.087 299 206 8 201 491 173 464 8.22e-16 80.1
Msa0208480 MtrunA17_Chr1g0197851 24.855 346 216 11 175 491 133 463 8.22e-16 80.1
Msa0208480 MtrunA17_Chr5g0430081 23.849 239 177 4 256 491 234 470 1.17e-15 79.7
Msa0208480 MtrunA17_Chr3g0135841 23.543 446 266 16 103 492 82 508 1.30e-15 79.7
Msa0208480 MtrunA17_Chr1g0163451 30.144 209 123 6 323 517 324 523 1.33e-15 79.3
Msa0208480 MtrunA17_Chr4g0011901 25.170 294 201 8 208 491 180 464 1.34e-15 79.3
Msa0208480 MtrunA17_Chr1g0178971 24.665 373 240 15 140 491 129 481 1.37e-15 79.3
Msa0208480 MtrunA17_Chr6g0472311 24.204 314 212 9 195 491 180 484 2.12e-15 79.0
Msa0208480 MtrunA17_Chr5g0431511 24.316 329 222 11 179 493 157 472 2.14e-15 79.0
Msa0208480 MtrunA17_Chr6g0451781 30.932 236 133 8 278 487 291 522 2.55e-15 78.6
Msa0208480 MtrunA17_Chr7g0227291 28.780 205 123 6 328 517 297 493 3.64e-15 78.2
Msa0208480 MtrunA17_Chr1g0197871 27.354 223 149 6 272 491 251 463 3.64e-15 78.2
Msa0208480 MtrunA17_Chr5g0430031 22.039 304 225 6 195 491 174 472 4.05e-15 77.8
Msa0208480 MtrunA17_Chr1g0174471 23.611 432 286 17 89 491 75 491 4.61e-15 77.8
Msa0208480 MtrunA17_Chr5g0430131 24.315 292 214 6 204 491 183 471 4.85e-15 77.8
Msa0208480 MtrunA17_Chr8g0372251 25.503 298 212 8 203 491 177 473 5.16e-15 77.8
Msa0208480 MtrunA17_Chr6g0449351 21.596 426 290 16 101 499 34 442 5.56e-15 77.4
Msa0208480 MtrunA17_Chr4g0011871 25.000 300 209 8 201 491 173 465 5.75e-15 77.4
Msa0208480 MtrunA17_Chr8g0356001 28.652 178 124 3 316 491 298 474 5.77e-15 77.4
Msa0208480 MtrunA17_Chr1g0163421 29.756 205 121 6 328 517 343 539 6.37e-15 77.4
Msa0208480 MtrunA17_Chr1g0163351 28.500 200 132 4 327 517 307 504 6.73e-15 77.4
Msa0208480 MtrunA17_Chr5g0403451 26.792 265 145 10 287 517 29 278 6.78e-15 75.1
Msa0208480 MtrunA17_Chr6g0451641 24.251 367 239 13 146 487 130 482 7.35e-15 77.0
Msa0208480 MtrunA17_Chr5g0395381 24.632 272 186 9 226 491 182 440 7.97e-15 77.0
Msa0208480 MtrunA17_Chr7g0246121 25.574 305 213 7 193 492 174 469 1.02e-14 76.6
Msa0208480 MtrunA17_Chr2g0280261 24.009 429 291 13 88 497 56 468 1.02e-14 76.6
Msa0208480 MtrunA17_Chr4g0039391 21.040 423 303 11 87 490 59 469 1.08e-14 76.6
Msa0208480 MtrunA17_Chr3g0113321 23.024 291 196 8 234 517 198 467 1.14e-14 76.6
Msa0208480 MtrunA17_Chr1g0174481 26.019 319 197 10 195 492 171 471 1.21e-14 76.3
Msa0208480 MtrunA17_Chr5g0406651 25.170 294 201 8 208 491 181 465 1.85e-14 75.9
Msa0208480 MtrunA17_Chr1g0205371 26.667 300 177 10 201 468 155 443 1.88e-14 75.9
Msa0208480 MtrunA17_Chr7g0246131 27.907 258 175 7 240 492 222 473 1.94e-14 75.9
Msa0208480 MtrunA17_Chr1g0163281 22.414 348 235 11 193 517 183 518 2.14e-14 75.9
Msa0208480 MtrunA17_Chr5g0430101 24.583 240 164 7 260 491 239 469 2.25e-14 75.5
Msa0208480 MtrunA17_Chr4g0026941 24.590 244 166 7 248 487 278 507 2.28e-14 75.9
Msa0208480 MtrunA17_Chr6g0451811 31.515 165 106 5 328 487 8 170 2.30e-14 72.4
Msa0208480 MtrunA17_Chr8g0380501 26.500 200 135 4 328 517 293 490 2.38e-14 75.5
Msa0208480 MtrunA17_Chr8g0388921 26.210 248 161 7 250 490 218 450 2.75e-14 75.1
Msa0208480 MtrunA17_Chr2g0293421 22.115 416 275 18 102 503 92 472 2.77e-14 75.1
Msa0208480 MtrunA17_Chr1g0174461 26.471 238 164 5 258 491 245 475 3.07e-14 75.1
Msa0208480 MtrunA17_Chr6g0463621 27.485 171 117 4 327 491 2 171 3.27e-14 71.6
Msa0208480 MtrunA17_Chr6g0484811 25.726 241 171 6 256 491 236 473 3.96e-14 74.7
Msa0208480 MtrunA17_Chr4g0017411 23.188 414 282 14 87 487 55 445 4.36e-14 74.7
Msa0208480 MtrunA17_Chr8g0348751 28.079 203 132 3 325 513 303 505 4.86e-14 74.7
Msa0208480 MtrunA17_Chr1g0163461 28.000 200 133 4 327 517 321 518 5.27e-14 74.3
Msa0208480 MtrunA17_Chr2g0280081 30.000 190 123 4 313 493 288 476 5.48e-14 75.1
Msa0208480 MtrunA17_Chr2g0280081 29.474 190 124 4 313 493 789 977 1.24e-13 73.9
Msa0208480 MtrunA17_Chr6g0455461 22.704 392 267 10 106 490 76 438 6.65e-14 73.9
Msa0208480 MtrunA17_Chr4g0057001 20.690 435 311 12 79 493 66 486 7.84e-14 73.9
Msa0208480 MtrunA17_Chr1g0163371 26.368 201 135 6 327 517 24 221 7.90e-14 70.9
Msa0208480 MtrunA17_Chr7g0258211 22.118 321 226 7 187 491 168 480 8.86e-14 73.9
Msa0208480 MtrunA17_Chr7g0255531 22.449 294 201 6 209 489 183 462 9.34e-14 73.6
Msa0208480 MtrunA17_Chr1g0164211 24.451 364 234 13 147 491 121 462 9.44e-14 73.6
Msa0208480 MtrunA17_Chr1g0198191 27.437 277 175 10 228 487 214 481 1.02e-13 73.6
Msa0208480 MtrunA17_Chr6g0451681 31.515 165 108 4 327 487 279 442 1.04e-13 73.6
Msa0208480 MtrunA17_Chr4g0056951 21.560 436 307 13 79 493 60 481 1.14e-13 73.6
Msa0208480 MtrunA17_Chr7g0246151 26.641 259 175 8 240 492 222 471 1.43e-13 73.2
Msa0208480 MtrunA17_Chr8g0339331 21.928 415 293 11 100 491 78 484 1.50e-13 73.2
Msa0208480 MtrunA17_Chr3g0107501 27.273 220 143 6 263 476 228 436 1.71e-13 72.8
Msa0208480 MtrunA17_Chr1g0163501 28.000 200 132 5 328 517 301 498 1.81e-13 72.8
Msa0208480 MtrunA17_Chr6g0484841 22.269 238 180 4 257 491 237 472 2.22e-13 72.4
Msa0208480 MtrunA17_Chr6g0458561 23.614 415 283 14 100 491 94 497 2.25e-13 72.4
Msa0208480 MtrunA17_Chr1g0174431 28.000 175 111 4 328 491 4 174 3.28e-13 68.9
Msa0208480 MtrunA17_Chr3g0101651 23.810 357 250 9 146 491 128 473 3.83e-13 71.6
Msa0208480 MtrunA17_Chr8g0381541 24.111 253 167 7 263 508 241 475 3.84e-13 71.6
Msa0208480 MtrunA17_Chr5g0400421 21.778 450 305 15 86 520 73 490 4.26e-13 71.6
Msa0208480 MtrunA17_Chr8g0369791 22.857 420 254 16 85 475 45 423 5.13e-13 71.2
Msa0208480 MtrunA17_Chr4g0011881 26.144 306 196 9 201 491 174 464 5.20e-13 71.2
Msa0208480 MtrunA17_Chr3g0101611 21.475 461 311 13 66 491 27 471 5.54e-13 71.2
Msa0208480 MtrunA17_Chr4g0039901 29.801 151 103 3 323 471 298 447 5.73e-13 71.2
Msa0208480 MtrunA17_Chr4g0011851 28.144 167 117 3 327 491 18 183 5.80e-13 68.2
Msa0208480 MtrunA17_Chr2g0314721 25.926 324 196 12 201 491 164 476 6.82e-13 70.9
Msa0208480 MtrunA17_Chr2g0280121 30.526 190 122 5 313 493 294 482 7.29e-13 70.9
Msa0208480 MtrunA17_Chr1g0200961 24.670 227 161 3 269 493 249 467 1.00e-12 70.5
Msa0208480 MtrunA17_Chr4g0011921 23.473 311 221 8 190 491 162 464 1.15e-12 70.1
Msa0208480 MtrunA17_Chr8g0381571 24.138 232 156 6 263 487 241 459 1.20e-12 70.1
Msa0208480 MtrunA17_Chr2g0314731 23.839 323 204 11 201 491 153 465 1.22e-12 70.1
Msa0208480 MtrunA17_Chr5g0400411 24.557 395 262 12 106 490 94 462 1.23e-12 70.1
Msa0208480 MtrunA17_Chr4g0044851 23.788 433 271 15 85 491 45 444 2.22e-12 69.3
Msa0208480 MtrunA17_Chr4g0011941 28.070 171 116 4 327 493 3 170 2.37e-12 66.2
Msa0208480 MtrunA17_Chr3g0101591 28.916 166 115 3 328 491 42 206 2.45e-12 67.0
Msa0208480 MtrunA17_Chr2g0280071 30.526 190 122 5 313 493 321 509 2.71e-12 69.3
Msa0208480 MtrunA17_Chr2g0310391 21.016 433 291 15 87 491 52 461 3.46e-12 68.6
Msa0208480 MtrunA17_Chr1g0163491 19.101 445 322 14 101 517 86 520 3.91e-12 68.6
Msa0208480 MtrunA17_Chr2g0280011 28.108 185 123 4 318 493 1 184 4.15e-12 65.9
Msa0208480 MtrunA17_Chr4g0008101 23.380 432 279 16 94 487 72 489 4.86e-12 68.2
Msa0208480 MtrunA17_Chr3g0107511 26.126 222 141 6 264 476 229 436 4.87e-12 68.2
Msa0208480 MtrunA17_Chr7g0214931 23.889 360 209 15 101 420 96 430 5.88e-12 67.8
Msa0208480 MtrunA17_Chr2g0310381 21.810 431 290 14 87 491 52 461 6.35e-12 67.8
Msa0208480 MtrunA17_Chr8g0380931 20.063 319 222 8 179 491 188 479 9.18e-12 67.4
Msa0208480 MtrunA17_Chr8g0364651 26.738 187 129 4 313 492 284 469 1.11e-11 67.0
Msa0208480 MtrunA17_Chr1g0163511 20.853 422 281 12 120 506 104 507 1.41e-11 67.0
Msa0208480 MtrunA17_Chr1g0171041 28.125 192 120 5 328 506 309 495 1.75e-11 66.6
Msa0208480 MtrunA17_Chr1g0163401 26.000 200 136 4 328 517 314 511 2.23e-11 66.2
Msa0208480 MtrunA17_Chr5g0430041 30.328 122 82 2 372 491 23 143 2.43e-11 62.8
Msa0208480 MtrunA17_Chr7g0258221 25.683 183 130 4 313 491 294 474 3.14e-11 65.9
Msa0208480 MtrunA17_Chr1g0200951 28.571 175 114 7 323 489 326 497 3.36e-11 65.9
Msa0208480 MtrunA17_Chr1g0153371 21.296 432 284 12 85 491 43 443 3.85e-11 65.5
Msa0208480 MtrunA17_Chr3g0094231 25.359 209 141 7 289 491 271 470 4.34e-11 65.1
Msa0208480 MtrunA17_Chr1g0210091 22.469 405 280 10 92 473 95 488 9.30e-11 64.3
Msa0208480 MtrunA17_Chr8g0355961 29.341 167 115 3 327 491 309 474 9.52e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0208480 AT3G14690.1 51.341 522 240 6 1 518 1 512 0.0 573
Msa0208480 AT3G14690.2 51.341 522 240 6 1 518 36 547 0.0 573
Msa0208480 AT3G14610.1 52.400 500 229 5 22 518 19 512 0.0 558
Msa0208480 AT3G14660.1 52.621 496 227 3 25 518 23 512 0.0 555
Msa0208480 AT3G14640.1 52.209 498 228 4 25 518 23 514 0.0 549
Msa0208480 AT3G14640.2 52.209 498 228 4 25 518 45 536 0.0 548
Msa0208480 AT3G14650.1 51.411 496 233 3 25 518 23 512 0.0 548
Msa0208480 AT3G14680.1 50.000 516 244 4 11 518 3 512 0.0 547
Msa0208480 AT3G14630.2 52.314 497 229 4 24 518 73 563 0.0 545
Msa0208480 AT3G14630.1 52.314 497 229 4 24 518 18 508 0.0 544
Msa0208480 AT3G14620.1 50.602 498 233 5 22 515 24 512 0.0 526
Msa0208480 AT2G26710.1 38.878 517 293 5 11 518 13 515 1.99e-138 410
Msa0208480 AT3G14660.2 52.841 352 159 2 168 518 21 366 2.77e-135 396
Msa0208480 AT3G14660.3 49.020 357 174 3 25 379 23 373 9.06e-126 373
Msa0208480 AT2G46960.2 36.667 510 296 11 23 519 23 518 1.81e-108 333
Msa0208480 AT2G46950.1 37.278 507 291 10 23 518 80 570 3.35e-105 326
Msa0208480 AT1G75130.1 34.809 497 304 6 30 520 23 505 6.04e-102 316
Msa0208480 AT4G27710.1 34.808 520 319 7 6 515 5 514 8.05e-102 316
Msa0208480 AT2G46960.1 39.512 410 226 8 121 519 4 402 2.17e-95 295
Msa0208480 AT5G38450.1 36.117 515 317 8 10 518 8 516 2.63e-95 299
Msa0208480 AT1G67110.1 33.074 514 325 7 11 518 10 510 9.12e-86 274
Msa0208480 AT5G52400.1 31.936 501 314 9 31 518 33 519 2.41e-85 273
Msa0208480 AT5G24910.1 32.768 531 329 13 7 519 11 531 4.43e-85 273
Msa0208480 AT5G24900.1 29.887 532 339 9 7 518 8 525 4.41e-79 257
Msa0208480 AT5G24900.2 34.872 390 232 6 140 518 30 408 7.70e-73 237
Msa0208480 AT1G17060.1 40.221 271 161 1 20 289 20 290 2.07e-72 233
Msa0208480 AT2G46950.2 33.967 368 216 10 23 379 80 431 5.05e-56 194
Msa0208480 AT4G27710.2 31.956 363 228 6 6 359 5 357 2.03e-52 182
Msa0208480 AT5G38450.2 31.452 372 246 6 10 375 8 376 8.34e-42 154
Msa0208480 AT1G31800.1 26.897 435 276 13 93 505 138 552 2.34e-38 148
Msa0208480 AT5G24910.2 28.040 403 264 12 7 391 11 405 3.10e-36 139
Msa0208480 AT4G15110.1 27.051 451 272 16 94 494 110 553 9.09e-36 141
Msa0208480 AT3G53130.1 27.805 410 240 14 108 491 133 512 8.76e-35 137
Msa0208480 AT1G67110.2 28.302 371 250 6 11 375 10 370 7.54e-33 129
Msa0208480 AT3G26125.1 25.721 451 290 14 100 513 85 527 5.01e-30 124
Msa0208480 AT1G24540.1 24.943 441 303 12 100 516 82 518 1.09e-29 122
Msa0208480 AT1G13150.1 24.821 419 277 14 126 515 105 514 2.68e-25 109
Msa0208480 AT5G23190.1 24.722 449 290 15 101 515 103 537 2.68e-25 110
Msa0208480 AT3G48310.1 24.650 357 246 9 146 495 121 461 1.15e-24 107
Msa0208480 AT2G45510.1 23.913 414 275 14 108 493 81 482 2.50e-24 106
Msa0208480 AT1G11680.1 25.915 355 223 9 154 495 135 462 7.39e-24 105
Msa0208480 AT1G13140.1 23.146 445 305 15 100 515 85 521 1.03e-23 105
Msa0208480 AT2G44890.1 22.936 436 293 13 108 513 81 503 1.20e-23 104
Msa0208480 AT3G48300.1 23.150 419 288 12 86 490 55 453 3.08e-23 103
Msa0208480 AT3G48300.2 23.150 419 288 12 86 490 57 455 3.12e-23 103
Msa0208480 AT1G13140.2 23.235 439 286 13 100 515 85 495 6.05e-23 102
Msa0208480 AT5G08250.1 22.788 452 298 16 101 517 42 477 6.81e-22 99.4
Msa0208480 AT3G26150.1 22.897 428 291 14 95 497 62 475 9.58e-22 99.0
Msa0208480 AT5G08250.2 22.788 452 298 16 101 517 104 539 1.24e-21 99.0
Msa0208480 AT3G48280.1 26.124 356 239 10 146 493 119 458 1.93e-21 97.8
Msa0208480 AT5G63450.2 26.776 366 226 14 145 487 183 529 2.32e-21 98.2
Msa0208480 AT5G63450.1 26.776 366 226 14 145 487 125 471 2.36e-21 97.8
Msa0208480 AT2G44890.2 22.633 433 280 14 108 513 81 485 4.47e-21 96.7
Msa0208480 AT3G48270.1 22.912 419 280 11 94 492 62 457 8.72e-21 95.9
Msa0208480 AT3G48520.1 23.577 369 241 13 141 487 119 468 1.88e-20 94.7
Msa0208480 AT3G26160.1 22.251 382 268 11 135 497 104 475 4.32e-20 94.0
Msa0208480 AT5G52320.1 26.296 270 165 7 277 518 239 502 6.03e-20 93.2
Msa0208480 AT1G69500.1 22.747 466 292 16 107 517 70 522 6.14e-20 93.6
Msa0208480 AT4G13310.1 25.356 351 214 11 179 512 155 474 6.16e-20 93.2
Msa0208480 AT1G13080.2 23.871 310 215 8 195 491 50 351 8.14e-20 92.0
Msa0208480 AT3G26280.1 23.326 433 291 14 87 493 56 473 9.71e-20 92.8
Msa0208480 AT3G26280.2 23.326 433 291 14 87 493 73 490 1.06e-19 92.8
Msa0208480 AT1G13080.1 24.194 310 214 9 195 491 168 469 1.77e-19 92.0
Msa0208480 AT5G24950.1 26.032 315 210 10 188 491 162 464 2.30e-19 91.7
Msa0208480 AT4G31500.1 25.846 325 206 11 188 493 160 468 4.66e-19 90.5
Msa0208480 AT2G23180.1 25.175 286 196 7 246 517 230 511 4.82e-19 90.5
Msa0208480 AT3G26230.1 23.962 313 218 8 195 493 163 469 4.99e-19 90.5
Msa0208480 AT5G52320.2 25.573 262 161 7 277 510 239 494 5.54e-19 90.5
Msa0208480 AT4G37400.1 26.304 441 268 15 79 490 47 459 7.17e-19 90.1
Msa0208480 AT3G26180.1 19.861 433 314 12 87 497 54 475 8.54e-19 89.7
Msa0208480 AT3G26830.1 20.519 424 302 15 92 493 57 467 1.08e-18 89.4
Msa0208480 AT1G57750.1 23.695 498 317 19 61 517 20 495 1.11e-18 89.4
Msa0208480 AT4G13290.1 25.434 346 212 10 179 512 156 467 1.56e-18 89.0
Msa0208480 AT4G32170.1 25.000 276 182 8 256 517 238 502 1.61e-18 89.0
Msa0208480 AT4G37430.1 26.077 441 267 17 85 490 46 462 1.67e-18 89.0
Msa0208480 AT4G39510.1 30.198 202 131 5 323 517 306 504 2.20e-18 88.6
Msa0208480 AT2G21910.1 23.503 451 294 19 101 517 72 505 2.77e-18 88.2
Msa0208480 AT1G65340.1 25.279 269 170 6 277 518 239 503 4.22e-18 87.8
Msa0208480 AT3G26170.1 19.400 433 316 12 87 497 54 475 4.36e-18 87.4
Msa0208480 AT2G42850.1 23.446 354 232 9 145 491 136 457 7.90e-18 86.7
Msa0208480 AT2G26170.1 22.844 429 272 14 103 492 85 493 1.06e-17 86.7
Msa0208480 AT1G13090.2 23.256 430 283 18 92 493 57 467 1.20e-17 86.3
Msa0208480 AT3G48290.1 22.434 419 284 11 94 493 64 460 1.20e-17 86.3
Msa0208480 AT2G26170.2 22.145 429 275 13 103 492 2 410 1.26e-17 85.9
Msa0208480 AT2G27690.1 22.770 426 285 15 108 506 76 484 1.50e-17 85.9
Msa0208480 AT2G30770.1 24.671 304 197 8 203 491 178 464 1.66e-17 85.9
Msa0208480 AT2G24180.1 22.889 450 296 15 94 514 67 494 2.07e-17 85.5
Msa0208480 AT3G48320.1 25.000 340 221 8 168 493 140 459 2.38e-17 85.1
Msa0208480 AT5G04330.1 24.451 364 251 9 162 506 127 485 3.05e-17 85.1
Msa0208480 AT5G35715.1 23.511 319 219 10 188 491 96 404 3.84e-17 84.3
Msa0208480 AT1G34540.1 25.310 403 246 19 118 491 94 470 5.05e-17 84.3
Msa0208480 AT4G00360.1 22.624 442 287 13 111 517 89 510 5.89e-17 84.3
Msa0208480 AT4G36220.1 22.796 329 237 8 178 491 157 483 6.26e-17 84.0
Msa0208480 AT1G01600.1 22.973 444 285 15 111 517 89 512 7.31e-17 84.0
Msa0208480 AT3G25180.1 22.967 418 290 13 92 489 70 475 7.50e-17 84.0
Msa0208480 AT3G48290.2 22.551 439 285 13 94 493 64 486 8.32e-17 83.6
Msa0208480 AT2G45970.1 22.374 438 288 15 108 510 82 502 1.07e-16 83.6
Msa0208480 AT3G56630.1 24.594 431 278 21 103 505 72 483 1.45e-16 82.8
Msa0208480 AT3G26190.1 22.838 451 306 15 92 518 57 489 1.96e-16 82.4
Msa0208480 AT5G09970.1 23.585 424 268 16 102 494 111 509 2.71e-16 82.0
Msa0208480 AT4G13770.1 23.248 314 224 7 188 491 161 467 3.09e-16 82.0
Msa0208480 AT4G37410.1 24.368 435 278 16 79 487 47 456 3.52e-16 81.6
Msa0208480 AT4G39500.1 26.238 202 138 4 323 517 268 465 4.21e-16 81.3
Msa0208480 AT4G39500.2 26.238 202 138 4 323 517 318 515 5.90e-16 80.9
Msa0208480 AT5G25140.1 21.911 429 285 14 92 493 58 463 8.43e-16 80.5
Msa0208480 AT5G02900.1 29.469 207 129 7 323 517 277 478 1.01e-15 80.1
Msa0208480 AT3G10560.1 24.912 285 190 7 214 487 207 478 1.13e-15 80.1
Msa0208480 AT5G25120.1 27.442 215 143 8 284 493 257 463 1.45e-15 79.7
Msa0208480 AT3G26330.1 21.810 431 285 15 92 493 60 467 1.60e-15 79.7
Msa0208480 AT5G45340.1 21.212 462 291 16 85 517 44 461 3.63e-15 78.2
Msa0208480 AT1G13100.1 21.176 425 297 15 94 493 56 467 3.84e-15 78.6
Msa0208480 AT2G32440.2 22.943 401 265 12 106 493 94 463 4.23e-15 78.2
Msa0208480 AT2G32440.1 22.943 401 265 12 106 493 94 463 4.23e-15 78.2
Msa0208480 AT1G11610.1 23.380 432 280 14 87 491 57 464 4.29e-15 78.2
Msa0208480 AT1G11610.2 23.326 433 281 14 87 492 57 465 4.70e-15 78.2
Msa0208480 AT5G45340.2 21.445 429 271 14 85 487 44 432 8.11e-15 77.0
Msa0208480 AT1G63710.1 22.145 429 291 11 116 517 94 506 8.49e-15 77.4
Msa0208480 AT1G74550.1 28.342 187 131 3 313 497 271 456 1.18e-14 77.0
Msa0208480 AT4G12330.1 22.018 436 301 15 81 493 64 483 1.66e-14 76.6
Msa0208480 AT3G26200.1 22.248 427 298 14 87 491 52 466 1.69e-14 76.3
Msa0208480 AT5G44620.1 23.667 300 206 9 207 493 195 484 1.78e-14 76.3
Msa0208480 AT1G47620.1 27.861 201 134 5 325 517 317 514 2.15e-14 76.3
Msa0208480 AT3G61040.1 29.187 209 130 7 288 490 267 463 2.34e-14 75.9
Msa0208480 AT3G01900.1 30.366 191 118 5 312 490 275 462 2.52e-14 75.9
Msa0208480 AT4G15396.3 23.970 267 164 9 241 488 194 440 2.60e-14 75.5
Msa0208480 AT4G15396.1 23.970 267 164 9 241 488 194 440 2.60e-14 75.9
Msa0208480 AT3G26270.1 21.338 314 222 10 195 493 169 472 2.62e-14 75.9
Msa0208480 AT4G15393.2 23.984 246 158 7 247 485 212 435 3.19e-14 75.5
Msa0208480 AT3G30290.1 28.814 177 115 5 313 485 197 366 3.22e-14 75.1
Msa0208480 AT3G10570.1 24.528 265 183 7 235 487 219 478 4.13e-14 75.1
Msa0208480 AT3G26180.2 22.267 247 178 7 256 497 104 341 4.22e-14 74.3
Msa0208480 AT5G42590.1 23.567 314 193 8 201 491 175 464 6.11e-14 74.7
Msa0208480 AT5G24960.1 24.918 305 198 10 207 496 182 470 6.22e-14 74.7
Msa0208480 AT1G33720.1 22.819 298 211 9 203 491 188 475 6.34e-14 74.7
Msa0208480 AT5G36110.1 23.746 299 199 10 197 490 174 448 6.65e-14 74.3
Msa0208480 AT1G64930.1 29.348 184 123 5 313 490 296 478 7.43e-14 74.3
Msa0208480 AT1G33720.4 22.819 298 211 9 203 491 56 343 7.46e-14 73.6
Msa0208480 AT1G33720.3 22.819 298 211 9 203 491 56 343 7.46e-14 73.6
Msa0208480 AT1G33720.5 22.819 298 211 9 203 491 56 343 7.46e-14 73.6
Msa0208480 AT2G45580.2 25.974 231 153 5 265 491 106 322 7.63e-14 73.6
Msa0208480 AT2G45580.1 25.974 231 153 5 265 491 260 476 8.12e-14 74.3
Msa0208480 AT1G64940.1 28.877 187 128 4 313 495 298 483 8.26e-14 74.3
Msa0208480 AT3G26300.1 22.857 315 202 11 200 493 173 467 8.70e-14 74.3
Msa0208480 AT3G20950.1 26.367 311 196 9 195 487 184 479 1.09e-13 73.9
Msa0208480 AT1G13110.1 21.967 305 212 11 200 488 174 468 1.45e-13 73.6
Msa0208480 AT2G45560.1 25.472 212 146 4 284 493 276 477 1.52e-13 73.6
Msa0208480 AT3G50660.1 27.111 225 134 5 284 493 280 489 2.06e-13 73.2
Msa0208480 AT2G45570.1 22.633 433 291 17 88 491 59 476 2.26e-13 72.8
Msa0208480 AT5G25180.1 21.853 421 295 16 92 493 58 463 2.81e-13 72.4
Msa0208480 AT4G39490.1 25.234 214 138 5 323 517 305 515 3.90e-13 72.0
Msa0208480 AT3G26210.1 20.690 319 231 10 188 493 161 470 4.12e-13 72.0
Msa0208480 AT4G12300.1 26.437 174 122 5 327 496 313 484 5.86e-13 71.6
Msa0208480 AT2G42250.1 23.529 340 223 10 163 487 160 477 9.80e-13 70.9
Msa0208480 AT5G04660.1 24.211 285 193 9 229 500 211 485 1.06e-12 70.9
Msa0208480 AT3G26290.1 24.377 361 245 13 147 493 121 467 1.14e-12 70.5
Msa0208480 AT3G26290.2 24.377 361 245 13 147 493 134 480 1.26e-12 70.5
Msa0208480 AT3G26220.1 22.430 321 213 10 195 493 166 472 1.27e-12 70.5
Msa0208480 AT5G38970.2 24.082 245 165 7 250 490 131 358 1.48e-12 69.7
Msa0208480 AT5G38970.4 24.082 245 165 7 250 490 131 358 1.48e-12 69.7
Msa0208480 AT3G53300.1 22.508 311 218 8 195 491 165 466 1.63e-12 70.1
Msa0208480 AT5G38970.1 24.082 245 165 7 250 490 212 439 2.04e-12 69.7
Msa0208480 AT4G39480.1 23.558 208 144 5 325 517 305 512 2.25e-12 69.7
Msa0208480 AT3G20935.1 24.000 275 172 8 245 491 40 305 2.45e-12 68.9
Msa0208480 AT2G45550.1 28.824 170 110 5 328 491 311 475 3.28e-12 69.3
Msa0208480 AT5G25130.1 26.036 169 120 4 328 493 297 463 3.34e-12 69.3
Msa0208480 AT1G01190.1 28.054 221 132 9 299 499 295 508 3.35e-12 69.3
Msa0208480 AT1G01190.2 28.054 221 132 9 299 499 300 513 3.38e-12 69.3
Msa0208480 AT5G36220.1 22.565 421 281 15 82 490 77 464 3.51e-12 69.3
Msa0208480 AT3G44250.1 20.991 424 304 14 88 491 53 465 4.02e-12 68.9
Msa0208480 AT2G30750.1 23.667 300 199 9 203 488 178 461 4.36e-12 68.9
Msa0208480 AT1G33720.2 26.590 173 122 4 322 491 198 368 7.72e-12 67.8
Msa0208480 AT5G25900.1 27.711 166 118 2 327 491 315 479 9.37e-12 67.8
Msa0208480 AT5G58860.1 22.807 399 263 15 116 487 97 477 1.31e-11 67.4
Msa0208480 AT1G50560.1 22.186 311 219 9 195 492 184 484 1.54e-11 67.0
Msa0208480 AT1G11600.1 26.855 283 189 10 221 487 196 476 1.54e-11 67.0
Msa0208480 AT4G37340.1 25.208 361 230 13 146 490 122 458 1.69e-11 67.0
Msa0208480 AT3G19270.2 21.789 436 275 12 85 491 42 440 1.74e-11 67.0
Msa0208480 AT3G19270.1 21.659 434 274 12 85 489 42 438 2.86e-11 66.2
Msa0208480 AT5G36220.2 23.453 307 204 10 195 490 32 318 3.22e-11 65.5
Msa0208480 AT4G37310.1 23.529 442 273 20 87 490 56 470 3.29e-11 66.2
Msa0208480 AT1G12740.4 22.133 497 316 18 10 490 9 450 4.34e-11 65.5
Msa0208480 AT4G31950.1 23.830 235 163 8 260 487 247 472 5.95e-11 65.5
Msa0208480 AT1G64950.1 28.342 187 129 4 313 495 297 482 6.19e-11 65.1
Msa0208480 AT5G47990.1 22.635 296 208 9 204 487 189 475 6.54e-11 65.1
Msa0208480 AT1G33730.1 21.549 297 216 7 203 491 52 339 9.20e-11 63.9
Msa0208480 AT1G33730.2 21.549 297 216 7 203 491 52 339 9.20e-11 63.9

Find 113 sgRNAs with CRISPR-Local

Find 200 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAAATCTTTAATCCCTTTA+TGG 0.113773 2_1:+43939278 Msa0208480:CDS
ATAAACTTATATTGAACTTT+TGG 0.221787 2_1:-43938637 None:intergenic
ACATGGAAACTTCAAGAATA+TGG 0.229415 2_1:+43939560 Msa0208480:CDS
AAGGAAGTATTAGAAATATT+TGG 0.242291 2_1:+43939714 Msa0208480:CDS
AAAAGCTTCTCTATCTTCTT+TGG 0.247771 2_1:-43937527 None:intergenic
TTTCGAGAAACGCCGGTTAT+AGG 0.248542 2_1:-43939932 None:intergenic
CTACTTCAGATCTGCTTGTT+TGG 0.292261 2_1:+43939643 Msa0208480:CDS
CTCTGTGGTTTGACTCTAGA+AGG 0.296638 2_1:-43939527 None:intergenic
ATTCATTTCTATAAATTTCA+TGG 0.305898 2_1:+43937328 Msa0208480:five_prime_UTR
AAATCTACCATTTGTTGCTT+TGG 0.306353 2_1:-43940101 None:intergenic
CTTGCACGTTCTTGCCAATC+AGG 0.311582 2_1:-43939690 None:intergenic
AACTTATTACACACTTAGTT+TGG 0.322418 2_1:+43937383 Msa0208480:five_prime_UTR
GTTTGTCCAATGCAGATTCT+AGG 0.323897 2_1:-43940148 None:intergenic
ATCAGAAAGATTCATGGGTT+TGG 0.324623 2_1:-43937636 None:intergenic
TCCCCAAGCAAAAGTCTATA+AGG 0.351347 2_1:-43937575 None:intergenic
TAGTCTCTTGCCCTGCAATA+TGG 0.351726 2_1:-43939623 None:intergenic
ATTGGTATGTGTTCTGATAT+TGG 0.352841 2_1:-43937307 None:intergenic
GTTATTGCTCGTTCGTCATT+TGG 0.354417 2_1:+43939181 Msa0208480:CDS
CATCACTGTGACATTTGGTT+TGG 0.357652 2_1:+43937466 Msa0208480:CDS
TGCATGTTATTCCATATTGC+AGG 0.360117 2_1:+43939612 Msa0208480:CDS
ACAAAGAAATGGAATTATCT+TGG 0.360822 2_1:+43937420 Msa0208480:exon
CAAGAGGGAGAAAGCAATAA+AGG 0.364543 2_1:+43939470 Msa0208480:CDS
CTCGGTCTTGTTAAACTAGA+AGG 0.368852 2_1:+43938673 Msa0208480:CDS
TGCCATCTTTGCTTCCAATA+GGG 0.373078 2_1:-43940176 None:intergenic
TGAAATTTATAGAAATGAAT+TGG 0.375311 2_1:-43937325 None:intergenic
GTCTATAAGGATTCCCTTGA+AGG 0.376966 2_1:-43937562 None:intergenic
GCCACTGAGAATGACTTATT+AGG 0.381371 2_1:+43939501 Msa0208480:CDS
ATTCTCATCACTGTGACATT+TGG 0.384177 2_1:+43937461 Msa0208480:CDS
TTCACCATGACTGTGAACTA+TGG 0.386719 2_1:+43940029 Msa0208480:CDS
TTGCCATCTTTGCTTCCAAT+AGG 0.386842 2_1:-43940177 None:intergenic
TAATAGTCTTACCTCCATAA+AGG 0.389113 2_1:-43939292 None:intergenic
AAAAGTGGAGCAAGCATAGA+AGG 0.391481 2_1:+43938698 Msa0208480:CDS
AATACTTCTCTTATTTGCTC+AGG 0.391689 2_1:-43938595 None:intergenic
TTAAGAGAACAAGGCCTTCA+AGG 0.413099 2_1:+43937548 Msa0208480:CDS
TTCCCTATTGGAAGCAAAGA+TGG 0.417195 2_1:+43940174 Msa0208480:CDS
TTCGAATGGATCCGGTGAAA+TGG 0.417321 2_1:+43939123 Msa0208480:CDS
CAATGATTTGATTAGCAATT+GGG 0.427882 2_1:+43939087 Msa0208480:CDS
GCAATGATTTGATTAGCAAT+TGG 0.428439 2_1:+43939086 Msa0208480:CDS
ATGCATGGAGGGTATTGAAT+TGG 0.428899 2_1:+43937492 Msa0208480:CDS
TCATGGTGAATCAAAACAAT+TGG 0.432430 2_1:-43940016 None:intergenic
CTTTGCTTCCAATAGGGAAA+AGG 0.434230 2_1:-43940170 None:intergenic
TATTATTAGAAACAAAGAAA+TGG 0.437052 2_1:+43937409 Msa0208480:exon
CATGGAAACTTCAAGAATAT+GGG 0.437130 2_1:+43939561 Msa0208480:CDS
AGGTTGTACCCTCCTATAAC+CGG 0.445607 2_1:+43939920 Msa0208480:CDS
CAAAGAAATGGAATTATCTT+GGG 0.447755 2_1:+43937421 Msa0208480:exon
TTATTTAGTCCATCAAAGTC+TGG 0.451786 2_1:-43939747 None:intergenic
TTTGGAAGTAGTTATGAAGA+AGG 0.453849 2_1:+43939199 Msa0208480:CDS
GTTGAGAATGATATAAAACT+TGG 0.454664 2_1:+43939956 Msa0208480:CDS
AATAGTCTTACCTCCATAAA+GGG 0.458091 2_1:-43939291 None:intergenic
TGTCACAGTGATGAGAATTA+TGG 0.466661 2_1:-43937456 None:intergenic
CATCACTAGTCAAGCTCTGA+AGG 0.470684 2_1:-43939159 None:intergenic
CGAGAAACGCCGGTTATAGG+AGG 0.472821 2_1:-43939929 None:intergenic
ATAAATCTAGATGACATAGA+AGG 0.475114 2_1:-43940406 None:intergenic
AATATCATCAGAAAGATTCA+TGG 0.491159 2_1:-43937642 None:intergenic
ATTCTAGGACCCGCTCCAAA+TGG 0.495014 2_1:-43940133 None:intergenic
GATCCGGTGAAATGGACATA+TGG 0.498735 2_1:+43939131 Msa0208480:CDS
GAAGAAATGTTGTCTTCGAA+TGG 0.508783 2_1:+43939109 Msa0208480:CDS
TTGCAGCATTTCAAGAATGT+TGG 0.509554 2_1:-43939067 None:intergenic
TGAACAGCGTGATGAATGTA+AGG 0.511989 2_1:-43937680 None:intergenic
TGTTGAGTCGGTACCCTGAT+TGG 0.514771 2_1:+43939676 Msa0208480:CDS
CTTGACATTATATGCTGGAA+TGG 0.518210 2_1:+43939982 Msa0208480:CDS
TAAGAGAACAAGGCCTTCAA+GGG 0.523677 2_1:+43937549 Msa0208480:CDS
GGAATTGCCAAAGCAACAAA+TGG 0.527150 2_1:+43940094 Msa0208480:CDS
TTTATGAAGTTAATAACTCT+CGG 0.530363 2_1:+43938655 Msa0208480:CDS
AGATCTGCTTGTTTGGACAA+TGG 0.532123 2_1:+43939650 Msa0208480:CDS
ATGTTGTCTTCGAATGGATC+CGG 0.533433 2_1:+43939115 Msa0208480:CDS
TTAAACTAGAAGGAGAAAAG+TGG 0.534070 2_1:+43938683 Msa0208480:CDS
CATTTGGTTTGGTATATGCA+TGG 0.540473 2_1:+43937477 Msa0208480:CDS
TCACCATGACTGTGAACTAT+GGG 0.540648 2_1:+43940030 Msa0208480:CDS
TGGTTTGGTATATGCATGGA+GGG 0.544310 2_1:+43937481 Msa0208480:CDS
CACAGAGAAATTAAAGAACA+TGG 0.547423 2_1:+43939543 Msa0208480:CDS
CTAGTCAAGCTCTGAAGGGA+AGG 0.549030 2_1:-43939154 None:intergenic
TTGCACGTTCTTGCCAATCA+GGG 0.552230 2_1:-43939689 None:intergenic
TTGAGTCTTGAAGAAGTAGT+GGG 0.555679 2_1:+43939585 Msa0208480:CDS
AGGCCATATGTCCATTTCAC+CGG 0.557349 2_1:-43939134 None:intergenic
TGAACAGTAAGCACCACAGC+TGG 0.558995 2_1:-43940256 None:intergenic
TGAAAGATAGTGAAAGCTCT+AGG 0.559710 2_1:-43940351 None:intergenic
CATGTTCTTTAATTTCTCTG+TGG 0.560672 2_1:-43939542 None:intergenic
GGACAATGGTGTTGTTGAGT+CGG 0.562717 2_1:+43939664 Msa0208480:CDS
ATCACTAGTCAAGCTCTGAA+GGG 0.565941 2_1:-43939158 None:intergenic
ATTCCACCAGAAAATCTCTC+AGG 0.566099 2_1:-43940076 None:intergenic
GCGGGTCCTAGAATCTGCAT+TGG 0.570394 2_1:+43940142 Msa0208480:CDS
ATTGAGTCTTGAAGAAGTAG+TGG 0.570980 2_1:+43939584 Msa0208480:CDS
AGGGAGAAAGCAATAAAGGC+AGG 0.573176 2_1:+43939474 Msa0208480:CDS
TTGGCAAGAACGTGCAAGGA+AGG 0.573505 2_1:+43939695 Msa0208480:CDS
ATCTTTCTATGATCAGCTGT+AGG 0.576522 2_1:-43939399 None:intergenic
ATATCATCAGAAAGATTCAT+GGG 0.576839 2_1:-43937641 None:intergenic
CTTACTGTTCAGCCACAACA+TGG 0.576957 2_1:+43940268 Msa0208480:CDS
TTGGTTTGGAACAAAACCAT+GGG 0.582476 2_1:+43938558 Msa0208480:CDS
TTTCAACTTCAAATAGAGCA+AGG 0.582534 2_1:+43939232 Msa0208480:CDS
GGAGACTTGACATTATATGC+TGG 0.582776 2_1:+43939977 Msa0208480:CDS
TTTGGTTTGGAACAAAACCA+TGG 0.585201 2_1:+43938557 Msa0208480:CDS
GAGTCTTGAAGAAGTAGTGG+GGG 0.586845 2_1:+43939587 Msa0208480:CDS
AATCTTTAATCCCTTTATGG+AGG 0.588764 2_1:+43939281 Msa0208480:CDS
TAAGAATATAATTAACAAGA+GGG 0.589124 2_1:+43939455 Msa0208480:CDS
TTAAGAATATAATTAACAAG+AGG 0.596045 2_1:+43939454 Msa0208480:CDS
CTGATTGGCAAGAACGTGCA+AGG 0.596135 2_1:+43939691 Msa0208480:CDS
GCATGTTATTCCATATTGCA+GGG 0.598648 2_1:+43939613 Msa0208480:CDS
CACCCCATAGTTCACAGTCA+TGG 0.599350 2_1:-43940033 None:intergenic
GGAGGGTATTGAATTGGATG+TGG 0.603973 2_1:+43937498 Msa0208480:CDS
TGAGTCTTGAAGAAGTAGTG+GGG 0.608707 2_1:+43939586 Msa0208480:CDS
GAGAAACGCCGGTTATAGGA+GGG 0.614261 2_1:-43939928 None:intergenic
TTGGTTTGGTATATGCATGG+AGG 0.626761 2_1:+43937480 Msa0208480:CDS
ATTGGAAGCAAAGATGGCAA+TGG 0.636575 2_1:+43940180 Msa0208480:CDS
AGTAATTTATAATAAGACGA+GGG 0.646818 2_1:+43937272 None:intergenic
GGTTCATTGAGAATCACCCA+TGG 0.655158 2_1:-43938574 None:intergenic
CATCACGCTGTTCAAACTCA+CGG 0.655820 2_1:+43937689 Msa0208480:CDS
AAGTAATTTATAATAAGACG+AGG 0.659163 2_1:+43937271 None:intergenic
ATATGCTCATGCTCCAGCTG+TGG 0.659208 2_1:+43940243 Msa0208480:CDS
ATAACATGAGCACCATGTTG+TGG 0.669219 2_1:-43940280 None:intergenic
ACCTAATAAGTCATTCTCAG+TGG 0.687179 2_1:-43939502 None:intergenic
CACCATGACTGTGAACTATG+GGG 0.714213 2_1:+43940031 Msa0208480:CDS
TGAATGTAAGGAGCAACACG+TGG 0.749170 2_1:-43937668 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAATTTATAGAAATGAAT+TGG - chr2_1:43937328-43937347 None:intergenic 15.0%
!! ATTCATTTCTATAAATTTCA+TGG + chr2_1:43937328-43937347 Msa0208480:five_prime_UTR 15.0%
!! TATTATTAGAAACAAAGAAA+TGG + chr2_1:43937409-43937428 Msa0208480:exon 15.0%
!!! AAAAAATCTTTTATTTGGTT+TGG + chr2_1:43938544-43938563 Msa0208480:CDS 15.0%
!!! TAAACTTATATTGAACTTTT+GGG - chr2_1:43938639-43938658 None:intergenic 15.0%
!!! ATAAACTTATATTGAACTTT+TGG - chr2_1:43938640-43938659 None:intergenic 15.0%
!! TTAAGAATATAATTAACAAG+AGG + chr2_1:43939454-43939473 Msa0208480:CDS 15.0%
!! TAAGAATATAATTAACAAGA+GGG + chr2_1:43939455-43939474 Msa0208480:CDS 15.0%
!!! TAAGTGTGTAATAAGTTTTT+CGG - chr2_1:43937380-43937399 None:intergenic 20.0%
!! TTTATCATTAAGTGAATAAG+TGG + chr2_1:43937828-43937847 Msa0208480:intron 20.0%
!! TTATCATTAAGTGAATAAGT+GGG + chr2_1:43937829-43937848 Msa0208480:intron 20.0%
!! TTTGACAAAGATTGAAATTA+AGG + chr2_1:43938161-43938180 Msa0208480:intron 20.0%
!! TTTATGAAGTTAATAACTCT+CGG + chr2_1:43938655-43938674 Msa0208480:CDS 20.0%
!!! AAGGAAGTATTAGAAATATT+TGG + chr2_1:43939714-43939733 Msa0208480:CDS 20.0%
!!! ATCAATTGTTTTGTTATAGA+TGG + chr2_1:43939874-43939893 Msa0208480:intron 20.0%
!!! TCAATTGTTTTGTTATAGAT+GGG + chr2_1:43939875-43939894 Msa0208480:intron 20.0%
!!! AGATTTTCATATTTTCCATT+TGG + chr2_1:43940118-43940137 Msa0208480:CDS 20.0%
! AACTTATTACACACTTAGTT+TGG + chr2_1:43937383-43937402 Msa0208480:five_prime_UTR 25.0%
! ACAAAGAAATGGAATTATCT+TGG + chr2_1:43937420-43937439 Msa0208480:exon 25.0%
! CAAAGAAATGGAATTATCTT+GGG + chr2_1:43937421-43937440 Msa0208480:exon 25.0%
! ATATCATCAGAAAGATTCAT+GGG - chr2_1:43937644-43937663 None:intergenic 25.0%
! AATATCATCAGAAAGATTCA+TGG - chr2_1:43937645-43937664 None:intergenic 25.0%
! TATCATTAAGTGAATAAGTG+GGG + chr2_1:43937830-43937849 Msa0208480:intron 25.0%
! AAAATCAAAATAGCATGAAG+TGG - chr2_1:43938143-43938162 None:intergenic 25.0%
!! CAGGGAAAAAATCTTTTATT+TGG + chr2_1:43938539-43938558 Msa0208480:intron 25.0%
!! TTTTCACATGGAAAAATTGA+AGG + chr2_1:43938735-43938754 Msa0208480:CDS 25.0%
! TTCTATCTAAGAATTGAACT+CGG - chr2_1:43938847-43938866 None:intergenic 25.0%
! CAATGATTTGATTAGCAATT+GGG + chr2_1:43939087-43939106 Msa0208480:CDS 25.0%
! TGAAATCTTTAATCCCTTTA+TGG + chr2_1:43939278-43939297 Msa0208480:CDS 25.0%
!! TGACTATTCTTTTTACTTGT+AGG + chr2_1:43939370-43939389 Msa0208480:intron 25.0%
!!! AAAAGTATTAAGGCTAGTAT+TGG - chr2_1:43939848-43939867 None:intergenic 25.0%
!!! AATACTAGCCTTAATACTTT+TGG + chr2_1:43939847-43939866 Msa0208480:intron 25.0%
!!! TGATGTTACCAAAAGTATTA+AGG - chr2_1:43939858-43939877 None:intergenic 25.0%
! GTTGAGAATGATATAAAACT+TGG + chr2_1:43939956-43939975 Msa0208480:CDS 25.0%
! ATAAATCTAGATGACATAGA+AGG - chr2_1:43940409-43940428 None:intergenic 25.0%
ATTGGTATGTGTTCTGATAT+TGG - chr2_1:43937310-43937329 None:intergenic 30.0%
AAAAGCTTCTCTATCTTCTT+TGG - chr2_1:43937530-43937549 None:intergenic 30.0%
! AATCCTTATAGACTTTTGCT+TGG + chr2_1:43937572-43937591 Msa0208480:CDS 30.0%
! ATCCTTATAGACTTTTGCTT+GGG + chr2_1:43937573-43937592 Msa0208480:CDS 30.0%
GAACAACTATTAGTTATGTC+TGG + chr2_1:43938016-43938035 Msa0208480:intron 30.0%
CAATGACAAGACTGTTTAAT+TGG + chr2_1:43938084-43938103 Msa0208480:intron 30.0%
TCGATTCTTCTAGATGAATT+TGG + chr2_1:43938267-43938286 Msa0208480:intron 30.0%
TTCTTCTAGATGAATTTGGT+CGG + chr2_1:43938271-43938290 Msa0208480:intron 30.0%
AATTTACTCTGAACCATATG+TGG + chr2_1:43938398-43938417 Msa0208480:intron 30.0%
TATAGCTAGATTACCACATA+TGG - chr2_1:43938414-43938433 None:intergenic 30.0%
!!! ATTTTTTCCCTGCATACAAT+GGG - chr2_1:43938531-43938550 None:intergenic 30.0%
! AATACTTCTCTTATTTGCTC+AGG - chr2_1:43938598-43938617 None:intergenic 30.0%
TTAAACTAGAAGGAGAAAAG+TGG + chr2_1:43938683-43938702 Msa0208480:CDS 30.0%
! ATTTTTCCATGTGAAAAGCA+GGG - chr2_1:43938732-43938751 None:intergenic 30.0%
! AATTTTTCCATGTGAAAAGC+AGG - chr2_1:43938733-43938752 None:intergenic 30.0%
TCTATCTAAGAATTGAACTC+GGG - chr2_1:43938846-43938865 None:intergenic 30.0%
!! AATGTTGGTGTCATAATCTA+TGG - chr2_1:43939055-43939074 None:intergenic 30.0%
GCAATGATTTGATTAGCAAT+TGG + chr2_1:43939086-43939105 Msa0208480:CDS 30.0%
TTTGGAAGTAGTTATGAAGA+AGG + chr2_1:43939199-43939218 Msa0208480:CDS 30.0%
TTTCAACTTCAAATAGAGCA+AGG + chr2_1:43939232-43939251 Msa0208480:CDS 30.0%
AATCTTTAATCCCTTTATGG+AGG + chr2_1:43939281-43939300 Msa0208480:CDS 30.0%
! AATAGTCTTACCTCCATAAA+GGG - chr2_1:43939294-43939313 None:intergenic 30.0%
! TAATAGTCTTACCTCCATAA+AGG - chr2_1:43939295-43939314 None:intergenic 30.0%
TTAGAGAAGGAAAAAAGAAC+TGG - chr2_1:43939328-43939347 None:intergenic 30.0%
! CATGTTCTTTAATTTCTCTG+TGG - chr2_1:43939545-43939564 None:intergenic 30.0%
CACAGAGAAATTAAAGAACA+TGG + chr2_1:43939543-43939562 Msa0208480:CDS 30.0%
ACATGGAAACTTCAAGAATA+TGG + chr2_1:43939560-43939579 Msa0208480:CDS 30.0%
CATGGAAACTTCAAGAATAT+GGG + chr2_1:43939561-43939580 Msa0208480:CDS 30.0%
AATGAAAAACCAGACTTTGA+TGG + chr2_1:43939738-43939757 Msa0208480:CDS 30.0%
TTATTTAGTCCATCAAAGTC+TGG - chr2_1:43939750-43939769 None:intergenic 30.0%
! TGATTTTGTATGAGGTTTTG+AGG + chr2_1:43939900-43939919 Msa0208480:CDS 30.0%
TCATGGTGAATCAAAACAAT+TGG - chr2_1:43940019-43940038 None:intergenic 30.0%
! AAATCTACCATTTGTTGCTT+TGG - chr2_1:43940104-43940123 None:intergenic 30.0%
! TTCATATTTTCCATTTGGAG+CGG + chr2_1:43940123-43940142 Msa0208480:CDS 30.0%
TGTCACAGTGATGAGAATTA+TGG - chr2_1:43937459-43937478 None:intergenic 35.0%
ATTCTCATCACTGTGACATT+TGG + chr2_1:43937461-43937480 Msa0208480:CDS 35.0%
!! CATTTGGTTTGGTATATGCA+TGG + chr2_1:43937477-43937496 Msa0208480:CDS 35.0%
!! GAGAAGCTTTTAAGAGAACA+AGG + chr2_1:43937539-43937558 Msa0208480:CDS 35.0%
! TCCTTATAGACTTTTGCTTG+GGG + chr2_1:43937574-43937593 Msa0208480:CDS 35.0%
ATCAGAAAGATTCATGGGTT+TGG - chr2_1:43937639-43937658 None:intergenic 35.0%
TTGATGAGAAACACACTTCA+AGG - chr2_1:43938237-43938256 None:intergenic 35.0%
TTGAAGTGTGTTTCTCATCA+AGG + chr2_1:43938236-43938255 Msa0208480:intron 35.0%
TCTTCTAGATGAATTTGGTC+GGG + chr2_1:43938272-43938291 Msa0208480:intron 35.0%
TGCGTAAAAAGTTTCACTGA+TGG + chr2_1:43938324-43938343 Msa0208480:intron 35.0%
!!! CAACAGCTCTTTTTTTACTG+AGG - chr2_1:43938370-43938389 None:intergenic 35.0%
!!! GATTTTTTCCCTGCATACAA+TGG - chr2_1:43938532-43938551 None:intergenic 35.0%
!! TTTGGTTTGGAACAAAACCA+TGG + chr2_1:43938557-43938576 Msa0208480:CDS 35.0%
!! TTGGTTTGGAACAAAACCAT+GGG + chr2_1:43938558-43938577 Msa0208480:CDS 35.0%
TCTACTAATGAGCTTCACTA+AGG + chr2_1:43938802-43938821 Msa0208480:intron 35.0%
AGATAGAACAATTCTTCGTC+AGG + chr2_1:43938859-43938878 Msa0208480:intron 35.0%
!!! TTTTTTTGGCGTTAACCATC+CGG - chr2_1:43938939-43938958 None:intergenic 35.0%
TTGCAGCATTTCAAGAATGT+TGG - chr2_1:43939070-43939089 None:intergenic 35.0%
GAAGAAATGTTGTCTTCGAA+TGG + chr2_1:43939109-43939128 Msa0208480:CDS 35.0%
AGCATCTTAGTGATTAGAGA+AGG - chr2_1:43939341-43939360 None:intergenic 35.0%
ATCTTTCTATGATCAGCTGT+AGG - chr2_1:43939402-43939421 None:intergenic 35.0%
ACCTAATAAGTCATTCTCAG+TGG - chr2_1:43939505-43939524 None:intergenic 35.0%
ATTGAGTCTTGAAGAAGTAG+TGG + chr2_1:43939584-43939603 Msa0208480:CDS 35.0%
TTGAGTCTTGAAGAAGTAGT+GGG + chr2_1:43939585-43939604 Msa0208480:CDS 35.0%
TGCATGTTATTCCATATTGC+AGG + chr2_1:43939612-43939631 Msa0208480:CDS 35.0%
GCATGTTATTCCATATTGCA+GGG + chr2_1:43939613-43939632 Msa0208480:CDS 35.0%
CTTGACATTATATGCTGGAA+TGG + chr2_1:43939982-43940001 Msa0208480:CDS 35.0%
! TTCAATCCTGAGAGATTTTC+TGG + chr2_1:43940070-43940089 Msa0208480:CDS 35.0%
!! TCATATTTTCCATTTGGAGC+GGG + chr2_1:43940124-43940143 Msa0208480:CDS 35.0%
TGAAAGATAGTGAAAGCTCT+AGG - chr2_1:43940354-43940373 None:intergenic 35.0%
TATCTTTCATGAAGTGTGTC+TGG + chr2_1:43940365-43940384 Msa0208480:intron 35.0%
CATCACTGTGACATTTGGTT+TGG + chr2_1:43937466-43937485 Msa0208480:CDS 40.0%
!! TTGGTTTGGTATATGCATGG+AGG + chr2_1:43937480-43937499 Msa0208480:CDS 40.0%
!! TGGTTTGGTATATGCATGGA+GGG + chr2_1:43937481-43937500 Msa0208480:CDS 40.0%
!! ATGCATGGAGGGTATTGAAT+TGG + chr2_1:43937492-43937511 Msa0208480:CDS 40.0%
TTAAGAGAACAAGGCCTTCA+AGG + chr2_1:43937548-43937567 Msa0208480:CDS 40.0%
TAAGAGAACAAGGCCTTCAA+GGG + chr2_1:43937549-43937568 Msa0208480:CDS 40.0%
GTCTATAAGGATTCCCTTGA+AGG - chr2_1:43937565-43937584 None:intergenic 40.0%
TCCCCAAGCAAAAGTCTATA+AGG - chr2_1:43937578-43937597 None:intergenic 40.0%
TGAACAGCGTGATGAATGTA+AGG - chr2_1:43937683-43937702 None:intergenic 40.0%
CAATTGAACCCCACTTAGAT+TGG + chr2_1:43938190-43938209 Msa0208480:intron 40.0%
ACCACCATACCAATCTAAGT+GGG - chr2_1:43938202-43938221 None:intergenic 40.0%
TCAATGAGGTTGTCGCTAAT+CGG - chr2_1:43938469-43938488 None:intergenic 40.0%
ATATTCCACCCATTGTATGC+AGG + chr2_1:43938520-43938539 Msa0208480:intron 40.0%
TATTCCACCCATTGTATGCA+GGG + chr2_1:43938521-43938540 Msa0208480:intron 40.0%
!! CTCGGTCTTGTTAAACTAGA+AGG + chr2_1:43938673-43938692 Msa0208480:CDS 40.0%
AAAAGTGGAGCAAGCATAGA+AGG + chr2_1:43938698-43938717 Msa0208480:CDS 40.0%
!! AATCAACCCTGCTTTTCACA+TGG + chr2_1:43938723-43938742 Msa0208480:CDS 40.0%
GAAAAGAAACCCTGGTAATC+CGG - chr2_1:43938909-43938928 None:intergenic 40.0%
! TTACCAGGGTTTCTTTTCCT+AGG + chr2_1:43938911-43938930 Msa0208480:intron 40.0%
ATGTTGTCTTCGAATGGATC+CGG + chr2_1:43939115-43939134 Msa0208480:CDS 40.0%
!! ATCACTAGTCAAGCTCTGAA+GGG - chr2_1:43939161-43939180 None:intergenic 40.0%
GTTATTGCTCGTTCGTCATT+TGG + chr2_1:43939181-43939200 Msa0208480:CDS 40.0%
CAAGAGGGAGAAAGCAATAA+AGG + chr2_1:43939470-43939489 Msa0208480:CDS 40.0%
GCCACTGAGAATGACTTATT+AGG + chr2_1:43939501-43939520 Msa0208480:CDS 40.0%
TGAGTCTTGAAGAAGTAGTG+GGG + chr2_1:43939586-43939605 Msa0208480:CDS 40.0%
CTACTTCAGATCTGCTTGTT+TGG + chr2_1:43939643-43939662 Msa0208480:CDS 40.0%
AGATCTGCTTGTTTGGACAA+TGG + chr2_1:43939650-43939669 Msa0208480:CDS 40.0%
! GATGGGCATGATTTTGTATG+AGG + chr2_1:43939892-43939911 Msa0208480:intron 40.0%
GGAGACTTGACATTATATGC+TGG + chr2_1:43939977-43939996 Msa0208480:CDS 40.0%
TTCACCATGACTGTGAACTA+TGG + chr2_1:43940029-43940048 Msa0208480:CDS 40.0%
TCACCATGACTGTGAACTAT+GGG + chr2_1:43940030-43940049 Msa0208480:CDS 40.0%
! AATCCTGAGAGATTTTCTGG+TGG + chr2_1:43940073-43940092 Msa0208480:CDS 40.0%
ATTCCACCAGAAAATCTCTC+AGG - chr2_1:43940079-43940098 None:intergenic 40.0%
GGAATTGCCAAAGCAACAAA+TGG + chr2_1:43940094-43940113 Msa0208480:CDS 40.0%
GTTTGTCCAATGCAGATTCT+AGG - chr2_1:43940151-43940170 None:intergenic 40.0%
! TGGACAAACCTTTTCCCTAT+TGG + chr2_1:43940162-43940181 Msa0208480:CDS 40.0%
CTTTGCTTCCAATAGGGAAA+AGG - chr2_1:43940173-43940192 None:intergenic 40.0%
TTCCCTATTGGAAGCAAAGA+TGG + chr2_1:43940174-43940193 Msa0208480:CDS 40.0%
TGCCATCTTTGCTTCCAATA+GGG - chr2_1:43940179-43940198 None:intergenic 40.0%
TTGCCATCTTTGCTTCCAAT+AGG - chr2_1:43940180-43940199 None:intergenic 40.0%
ATTGGAAGCAAAGATGGCAA+TGG + chr2_1:43940180-43940199 Msa0208480:CDS 40.0%
ATAACATGAGCACCATGTTG+TGG - chr2_1:43940283-43940302 None:intergenic 40.0%
!! GGAGGGTATTGAATTGGATG+TGG + chr2_1:43937498-43937517 Msa0208480:CDS 45.0%
! ACTTTTGCTTGGGGATGCAA+AGG + chr2_1:43937583-43937602 Msa0208480:CDS 45.0%
TGAATGTAAGGAGCAACACG+TGG - chr2_1:43937671-43937690 None:intergenic 45.0%
CATCACGCTGTTCAAACTCA+CGG + chr2_1:43937689-43937708 Msa0208480:CDS 45.0%
! AAGTGAATAAGTGGGGTGTC+TGG + chr2_1:43937837-43937856 Msa0208480:intron 45.0%
GAACCCCACTTAGATTGGTA+TGG + chr2_1:43938195-43938214 Msa0208480:intron 45.0%
CCACCATACCAATCTAAGTG+GGG - chr2_1:43938201-43938220 None:intergenic 45.0%
CACCACCATACCAATCTAAG+TGG - chr2_1:43938203-43938222 None:intergenic 45.0%
ACCTCATTGAAGTCATGTCG+TGG + chr2_1:43938479-43938498 Msa0208480:intron 45.0%
ACCACGACATGACTTCAATG+AGG - chr2_1:43938483-43938502 None:intergenic 45.0%
! TTTTCCCTGCATACAATGGG+TGG - chr2_1:43938528-43938547 None:intergenic 45.0%
GGTTCATTGAGAATCACCCA+TGG - chr2_1:43938577-43938596 None:intergenic 45.0%
! GTCAGGCTATCCTTAACTTG+CGG + chr2_1:43938876-43938895 Msa0208480:intron 45.0%
!! CTTAACTTGCGGATGAACTC+CGG + chr2_1:43938887-43938906 Msa0208480:intron 45.0%
GTACCTAGGAAAAGAAACCC+TGG - chr2_1:43938917-43938936 None:intergenic 45.0%
! GGGTTTCTTTTCCTAGGTAC+CGG + chr2_1:43938917-43938936 Msa0208480:intron 45.0%
!!! TTCTTTTCCTAGGTACCGGA+TGG + chr2_1:43938921-43938940 Msa0208480:intron 45.0%
TTCGAATGGATCCGGTGAAA+TGG + chr2_1:43939123-43939142 Msa0208480:CDS 45.0%
GATCCGGTGAAATGGACATA+TGG + chr2_1:43939131-43939150 Msa0208480:CDS 45.0%
AGGCCATATGTCCATTTCAC+CGG - chr2_1:43939137-43939156 None:intergenic 45.0%
! CATCACTAGTCAAGCTCTGA+AGG - chr2_1:43939162-43939181 None:intergenic 45.0%
AGGGAGAAAGCAATAAAGGC+AGG + chr2_1:43939474-43939493 Msa0208480:CDS 45.0%
CTCTGTGGTTTGACTCTAGA+AGG - chr2_1:43939530-43939549 None:intergenic 45.0%
GAGTCTTGAAGAAGTAGTGG+GGG + chr2_1:43939587-43939606 Msa0208480:CDS 45.0%
TAGTCTCTTGCCCTGCAATA+TGG - chr2_1:43939626-43939645 None:intergenic 45.0%
!! GGACAATGGTGTTGTTGAGT+CGG + chr2_1:43939664-43939683 Msa0208480:CDS 45.0%
TTGCACGTTCTTGCCAATCA+GGG - chr2_1:43939692-43939711 None:intergenic 45.0%
AGGTTGTACCCTCCTATAAC+CGG + chr2_1:43939920-43939939 Msa0208480:CDS 45.0%
! TTTCGAGAAACGCCGGTTAT+AGG - chr2_1:43939935-43939954 None:intergenic 45.0%
!! CTCAACTTTTCGAGAAACGC+CGG - chr2_1:43939942-43939961 None:intergenic 45.0%
CACCATGACTGTGAACTATG+GGG + chr2_1:43940031-43940050 Msa0208480:CDS 45.0%
CTTACTGTTCAGCCACAACA+TGG + chr2_1:43940268-43940287 Msa0208480:CDS 45.0%
! GAAGTGTGTCTGGAGCTTAA+TGG + chr2_1:43940375-43940394 Msa0208480:intron 45.0%
!!! AAAAGAAATTATTATTTTTT+TGG - chr2_1:43938953-43938972 None:intergenic 5.0%
! TAAGTGGGGTGTCTGGAGTT+CGG + chr2_1:43937844-43937863 Msa0208480:intron 50.0%
AAGTCCCTGTGAGCTTAGCT+CGG - chr2_1:43937908-43937927 None:intergenic 50.0%
CCCCACTTAGATTGGTATGG+TGG + chr2_1:43938198-43938217 Msa0208480:intron 50.0%
!! TTGGTATGGTGGTGCTGACT+TGG + chr2_1:43938209-43938228 Msa0208480:intron 50.0%
!! TGGTATGGTGGTGCTGACTT+GGG + chr2_1:43938210-43938229 Msa0208480:intron 50.0%
CGGAGTTCATCCGCAAGTTA+AGG - chr2_1:43938889-43938908 None:intergenic 50.0%
GGATGAACTCCGGATTACCA+GGG + chr2_1:43938897-43938916 Msa0208480:intron 50.0%
!! CTAGTCAAGCTCTGAAGGGA+AGG - chr2_1:43939157-43939176 None:intergenic 50.0%
TGTTGAGTCGGTACCCTGAT+TGG + chr2_1:43939676-43939695 Msa0208480:CDS 50.0%
CTTGCACGTTCTTGCCAATC+AGG - chr2_1:43939693-43939712 None:intergenic 50.0%
CTGATTGGCAAGAACGTGCA+AGG + chr2_1:43939691-43939710 Msa0208480:CDS 50.0%
TTGGCAAGAACGTGCAAGGA+AGG + chr2_1:43939695-43939714 Msa0208480:CDS 50.0%
! GAGAAACGCCGGTTATAGGA+GGG - chr2_1:43939931-43939950 None:intergenic 50.0%
CACCCCATAGTTCACAGTCA+TGG - chr2_1:43940036-43940055 None:intergenic 50.0%
!! ATTCTAGGACCCGCTCCAAA+TGG - chr2_1:43940136-43940155 None:intergenic 50.0%
ATATGCTCATGCTCCAGCTG+TGG + chr2_1:43940243-43940262 Msa0208480:CDS 50.0%
TGAACAGTAAGCACCACAGC+TGG - chr2_1:43940259-43940278 None:intergenic 50.0%
AGCAACCGAGCTAAGCTCAC+AGG + chr2_1:43937900-43937919 Msa0208480:intron 55.0%
GCAACCGAGCTAAGCTCACA+GGG + chr2_1:43937901-43937920 Msa0208480:intron 55.0%
! AGGTTGTCGCTAATCGGCTC+AGG - chr2_1:43938463-43938482 None:intergenic 55.0%
CGGATGAACTCCGGATTACC+AGG + chr2_1:43938896-43938915 Msa0208480:intron 55.0%
GCGTTAACCATCCGGTACCT+AGG - chr2_1:43938931-43938950 None:intergenic 55.0%
! CGAGAAACGCCGGTTATAGG+AGG - chr2_1:43939932-43939951 None:intergenic 55.0%
GCGGGTCCTAGAATCTGCAT+TGG + chr2_1:43940142-43940161 Msa0208480:CDS 55.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 43937285 43940481 43937285 ID=Msa0208480;Name=Msa0208480
chr2_1 mRNA 43937285 43940481 43937285 ID=Msa0208480-mRNA-1;Parent=Msa0208480;Name=Msa0208480-mRNA-1;_AED=0.06;_eAED=0.06;_QI=143|1|1|1|0.8|0.66|6|130|520
chr2_1 exon 43937285 43937710 43937285 ID=Msa0208480-mRNA-1:exon:12872;Parent=Msa0208480-mRNA-1
chr2_1 exon 43938542 43938756 43938542 ID=Msa0208480-mRNA-1:exon:12873;Parent=Msa0208480-mRNA-1
chr2_1 exon 43939058 43939302 43939058 ID=Msa0208480-mRNA-1:exon:12874;Parent=Msa0208480-mRNA-1
chr2_1 exon 43939392 43939779 43939392 ID=Msa0208480-mRNA-1:exon:12875;Parent=Msa0208480-mRNA-1
chr2_1 exon 43939893 43940381 43939893 ID=Msa0208480-mRNA-1:exon:12876;Parent=Msa0208480-mRNA-1
chr2_1 exon 43940409 43940481 43940409 ID=Msa0208480-mRNA-1:exon:12877;Parent=Msa0208480-mRNA-1
chr2_1 five_prime_UTR 43937285 43937427 43937285 ID=Msa0208480-mRNA-1:five_prime_utr;Parent=Msa0208480-mRNA-1
chr2_1 CDS 43937428 43937710 43937428 ID=Msa0208480-mRNA-1:cds;Parent=Msa0208480-mRNA-1
chr2_1 CDS 43938542 43938756 43938542 ID=Msa0208480-mRNA-1:cds;Parent=Msa0208480-mRNA-1
chr2_1 CDS 43939058 43939302 43939058 ID=Msa0208480-mRNA-1:cds;Parent=Msa0208480-mRNA-1
chr2_1 CDS 43939392 43939779 43939392 ID=Msa0208480-mRNA-1:cds;Parent=Msa0208480-mRNA-1
chr2_1 CDS 43939893 43940324 43939893 ID=Msa0208480-mRNA-1:cds;Parent=Msa0208480-mRNA-1
chr2_1 three_prime_UTR 43940325 43940381 43940325 ID=Msa0208480-mRNA-1:three_prime_utr;Parent=Msa0208480-mRNA-1
chr2_1 three_prime_UTR 43940409 43940481 43940409 ID=Msa0208480-mRNA-1:three_prime_utr;Parent=Msa0208480-mRNA-1
Gene Sequence

>Msa0208480

ATGGAATTATCTTGGGCAACAAATTCAGCCATAATTCTCATCACTGTGACATTTGGTTTGGTATATGCATGGAGGGTATTGAATTGGATGTGGCTGAAGCCAAAGAAGATAGAGAAGCTTTTAAGAGAACAAGGCCTTCAAGGGAATCCTTATAGACTTTTGCTTGGGGATGCAAAGGATTATTTTGTGATGCAAAAGAAAGTTCAATCCAAACCCATGAATCTTTCTGATGATATTGCACCACGTGTTGCTCCTTACATTCATCACGCTGTTCAAACTCACGGGAAAAAATCTTTTATTTGGTTTGGAACAAAACCATGGGTGATTCTCAATGAACCTGAGCAAATAAGAGAAGTATTCAACAAGATATCTGAGTTCCCAAAAGTTCAATATAAGTTTATGAAGTTAATAACTCTCGGTCTTGTTAAACTAGAAGGAGAAAAGTGGAGCAAGCATAGAAGGATAATCAACCCTGCTTTTCACATGGAAAAATTGAAGATTATGACACCAACATTCTTGAAATGCTGCAATGATTTGATTAGCAATTGGGAAGAAATGTTGTCTTCGAATGGATCCGGTGAAATGGACATATGGCCTTCCCTTCAGAGCTTGACTAGTGATGTTATTGCTCGTTCGTCATTTGGAAGTAGTTATGAAGAAGGAAGAAAAGTATTTCAACTTCAAATAGAGCAAGGTGAACTTATAATGAAAAATCTAATGAAATCTTTAATCCCTTTATGGAGGTTTTTACCTACAGCTGATCATAGAAAGATAAATGAAAACGATAAACAAATAGAAACTACTATTAAGAATATAATTAACAAGAGGGAGAAAGCAATAAAGGCAGGTGAAGCCACTGAGAATGACTTATTAGGTCTCCTTCTAGAGTCAAACCACAGAGAAATTAAAGAACATGGAAACTTCAAGAATATGGGATTGAGTCTTGAAGAAGTAGTGGGGGAATGCATGTTATTCCATATTGCAGGGCAAGAGACTACTTCAGATCTGCTTGTTTGGACAATGGTGTTGTTGAGTCGGTACCCTGATTGGCAAGAACGTGCAAGGAAGGAAGTATTAGAAATATTTGGCAATGAAAAACCAGACTTTGATGGACTAAATAAACTTAAGATTATGGGCATGATTTTGTATGAGGTTTTGAGGTTGTACCCTCCTATAACCGGCGTTTCTCGAAAAGTTGAGAATGATATAAAACTTGGAGACTTGACATTATATGCTGGAATGGATGTTTACTTGCCAATTGTTTTGATTCACCATGACTGTGAACTATGGGGTGATGATGCTAAGATGTTCAATCCTGAGAGATTTTCTGGTGGAATTGCCAAAGCAACAAATGGTAGATTTTCATATTTTCCATTTGGAGCGGGTCCTAGAATCTGCATTGGACAAACCTTTTCCCTATTGGAAGCAAAGATGGCAATGGCATTGATTTTACAAAAATTTTCATTTGAACTTTCTCAAACATATGCTCATGCTCCAGCTGTGGTGCTTACTGTTCAGCCACAACATGGTGCTCATGTTATTCTACGCAAAATCAAAACATAG
Protein sequence

>Msa0208480

MELSWATNSAIILITVTFGLVYAWRVLNWMWLKPKKIEKLLREQGLQGNPYRLLLGDAKDYFVMQKKVQSKPMNLSDDIAPRVAPYIHHAVQTHGKKSFIWFGTKPWVILNEPEQIREVFNKISEFPKVQYKFMKLITLGLVKLEGEKWSKHRRIINPAFHMEKLKIMTPTFLKCCNDLISNWEEMLSSNGSGEMDIWPSLQSLTSDVIARSSFGSSYEEGRKVFQLQIEQGELIMKNLMKSLIPLWRFLPTADHRKINENDKQIETTIKNIINKREKAIKAGEATENDLLGLLLESNHREIKEHGNFKNMGLSLEEVVGECMLFHIAGQETTSDLLVWTMVLLSRYPDWQERARKEVLEIFGNEKPDFDGLNKLKIMGMILYEVLRLYPPITGVSRKVENDIKLGDLTLYAGMDVYLPIVLIHHDCELWGDDAKMFNPERFSGGIAKATNGRFSYFPFGAGPRICIGQTFSLLEAKMAMALILQKFSFELSQTYAHAPAVVLTVQPQHGAHVILRKIKT*