AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0209020

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209020 MtrunA17_Chr2g0307471 87.809 607 24 2 1 607 1 557 0.0 1007
Msa0209020 MtrunA17_Chr4g0062301 68.702 524 116 3 83 605 84 560 0.0 717
Msa0209020 MtrunA17_Chr4g0062321 76.087 230 54 1 183 411 4 233 2.50e-126 372
Msa0209020 MtrunA17_Chr8g0354761 39.474 494 238 10 95 580 7 447 4.31e-100 312
Msa0209020 MtrunA17_Chr5g0443991 37.988 487 249 6 101 583 81 518 3.73e-95 308
Msa0209020 MtrunA17_Chr2g0301281 34.421 613 256 14 89 603 34 598 6.84e-95 303
Msa0209020 MtrunA17_Chr4g0029191 34.370 611 255 14 91 603 39 601 2.05e-93 300
Msa0209020 MtrunA17_Chr4g0034411 38.367 490 240 12 102 583 83 518 3.03e-90 295
Msa0209020 MtrunA17_Chr3g0114081 33.397 524 276 9 83 583 1 474 4.03e-79 261
Msa0209020 MtrunA17_Chr6g0483491 36.829 410 197 8 95 499 9 361 6.33e-72 238
Msa0209020 MtrunA17_Chr7g0236841 36.341 410 199 8 95 499 9 361 1.31e-70 234
Msa0209020 MtrunA17_Chr8g0347161 30.821 597 310 22 30 584 16 551 6.40e-64 220
Msa0209020 MtrunA17_Chr8g0347151 32.220 509 272 13 92 583 197 649 7.04e-62 217
Msa0209020 MtrunA17_Chr8g0386451 30.181 497 276 13 76 560 273 710 3.52e-60 214
Msa0209020 MtrunA17_Chr4g0062331 76.724 116 27 0 455 570 1 116 1.04e-59 197
Msa0209020 MtrunA17_Chr2g0300291 29.800 500 274 8 54 536 99 538 2.17e-58 208
Msa0209020 MtrunA17_Chr8g0347171 32.252 493 242 16 89 555 153 579 4.08e-57 203
Msa0209020 MtrunA17_Chr3g0098121 28.629 496 276 9 58 536 114 548 3.75e-52 191
Msa0209020 MtrunA17_Chr2g0330401 30.918 414 228 11 95 503 95 455 1.51e-48 176
Msa0209020 MtrunA17_Chr3g0107851 29.067 461 254 11 65 506 81 487 4.29e-47 174
Msa0209020 MtrunA17_Chr7g0247191 29.948 384 214 5 97 480 151 479 7.66e-46 169
Msa0209020 MtrunA17_Chr7g0247221 28.764 445 252 9 43 480 86 472 8.56e-46 169
Msa0209020 MtrunA17_Chr7g0247181 29.688 384 215 5 97 480 141 469 3.94e-45 167
Msa0209020 MtrunA17_Chr2g0277821 29.710 414 225 11 96 499 504 861 8.88e-45 171
Msa0209020 MtrunA17_Chr2g0310581 30.637 408 216 10 93 490 50 400 1.73e-44 166
Msa0209020 MtrunA17_Chr1g0200181 29.765 383 209 7 119 492 168 499 4.46e-44 166
Msa0209020 MtrunA17_Chr4g0040761 28.818 406 235 8 97 500 20 373 1.43e-43 166
Msa0209020 MtrunA17_Chr2g0293631 30.175 401 223 9 96 492 496 843 2.55e-43 167
Msa0209020 MtrunA17_Chr1g0157691 27.273 407 236 7 95 492 146 501 2.17e-42 161
Msa0209020 MtrunA17_Chr7g0270131 28.676 408 238 6 95 499 231 588 1.58e-40 157
Msa0209020 MtrunA17_Chr5g0442191 27.869 427 241 11 88 504 71 440 7.34e-40 154
Msa0209020 MtrunA17_Chr3g0095031 27.612 402 226 10 97 490 91 435 8.92e-40 153
Msa0209020 MtrunA17_Chr1g0193491 29.056 413 236 8 85 491 102 463 1.05e-39 154
Msa0209020 MtrunA17_Chr3g0121351 27.848 474 264 11 52 504 104 520 1.23e-39 153
Msa0209020 MtrunA17_Chr4g0058591 35.714 308 174 10 110 406 216 510 2.19e-39 151
Msa0209020 MtrunA17_Chr6g0449911 29.000 400 229 8 96 492 165 512 4.35e-39 153
Msa0209020 MtrunA17_Chr7g0271121 28.426 394 227 6 115 504 125 467 6.02e-39 152
Msa0209020 MtrunA17_Chr4g0076491 28.670 436 227 12 96 504 287 665 5.45e-37 146
Msa0209020 MtrunA17_Chr4g0070981 27.670 412 234 10 95 501 40 392 5.54e-37 142
Msa0209020 MtrunA17_Chr1g0176041 28.761 452 242 11 61 492 125 516 5.67e-37 145
Msa0209020 MtrunA17_Chr6g0449741 28.440 436 226 13 96 504 249 625 1.43e-36 145
Msa0209020 MtrunA17_Chr5g0429221 28.837 430 229 11 95 510 2 368 4.48e-36 140
Msa0209020 MtrunA17_Chr2g0299681 26.764 411 237 10 95 500 40 391 1.93e-35 138
Msa0209020 MtrunA17_Chr7g0236831 24.947 469 236 11 96 496 163 583 5.80e-35 141
Msa0209020 MtrunA17_Chr4g0063551 28.571 434 231 12 80 490 128 505 1.45e-34 139
Msa0209020 MtrunA17_Chr2g0329931 27.778 414 231 13 94 500 39 391 1.94e-34 135
Msa0209020 MtrunA17_Chr6g0466611 28.095 420 220 14 96 490 142 504 3.99e-33 135
Msa0209020 MtrunA17_Chr5g0409981 28.827 392 211 9 114 492 120 456 4.42e-33 133
Msa0209020 MtrunA17_Chr8g0342861 27.361 413 232 13 95 500 40 391 1.01e-32 130
Msa0209020 MtrunA17_Chr2g0297261 24.213 413 257 8 90 501 28 385 3.27e-32 129
Msa0209020 MtrunA17_Chr6g0461751 27.546 432 237 14 96 509 140 513 1.31e-31 129
Msa0209020 MtrunA17_Chr3g0145781 25.959 443 247 14 89 501 125 516 1.43e-31 129
Msa0209020 MtrunA17_Chr6g0475251 30.311 386 202 13 121 494 128 458 2.90e-31 129
Msa0209020 MtrunA17_Chr4g0003441 25.679 405 242 9 92 492 104 453 6.93e-31 126
Msa0209020 MtrunA17_Chr1g0204391 28.539 445 227 15 78 494 34 415 7.36e-31 127
Msa0209020 MtrunA17_Chr7g0263771 27.089 395 228 10 110 501 147 484 3.86e-30 125
Msa0209020 MtrunA17_Chr4g0039471 36.683 199 119 3 96 292 223 416 2.68e-28 117
Msa0209020 MtrunA17_Chr1g0192021 25.862 406 261 10 94 481 24 407 4.35e-28 119
Msa0209020 MtrunA17_Chr8g0349951 41.772 158 80 4 95 248 9 158 8.58e-27 106
Msa0209020 MtrunA17_Chr1g0149251 25.895 363 210 9 134 492 2 309 2.16e-25 107
Msa0209020 MtrunA17_Chr2g0309551 23.293 498 274 13 79 521 96 540 1.42e-23 105
Msa0209020 MtrunA17_Chr1g0155201 26.852 324 160 8 211 531 4 253 2.62e-22 99.0
Msa0209020 MtrunA17_Chr4g0004301 23.326 463 224 14 102 490 35 440 6.18e-19 90.1
Msa0209020 MtrunA17_Chr5g0434301 23.326 463 224 15 102 490 35 440 3.60e-18 87.8
Msa0209020 MtrunA17_Chr8g0364251 29.167 192 118 5 94 271 89 276 5.07e-18 87.8
Msa0209020 MtrunA17_Chr1g0179761 26.050 476 278 20 46 493 20 449 2.71e-17 85.1
Msa0209020 MtrunA17_Chr4g0074521 27.190 331 203 13 108 409 94 415 2.29e-15 79.0
Msa0209020 MtrunA17_Chr3g0137891 29.586 169 98 6 134 293 2 158 5.94e-12 65.9
Msa0209020 MtrunA17_Chr0c30g0494091 30.481 187 114 7 108 283 94 275 1.72e-11 66.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0209020 AT3G18600.1 59.247 584 172 6 25 596 14 543 0.0 669
Msa0209020 AT5G65900.1 60.196 510 155 4 89 597 148 610 0.0 631
Msa0209020 AT5G54910.1 37.398 492 252 10 97 583 73 513 2.75e-96 311
Msa0209020 AT2G40700.1 34.175 594 245 14 89 583 24 570 8.38e-87 282
Msa0209020 AT5G05450.1 33.010 515 271 11 92 584 11 473 1.49e-72 244
Msa0209020 AT1G71370.1 32.863 496 266 10 102 584 23 464 3.66e-72 242
Msa0209020 AT5G60990.1 35.062 405 205 6 95 490 9 364 8.38e-66 223
Msa0209020 AT5G08620.1 29.381 582 328 12 31 587 10 533 1.12e-63 219
Msa0209020 AT5G63630.1 31.002 529 293 12 71 583 31 503 6.21e-59 206
Msa0209020 AT5G08610.1 30.137 511 288 11 92 587 379 835 1.80e-58 210
Msa0209020 AT5G63630.2 31.380 529 291 13 71 583 225 697 4.21e-58 207
Msa0209020 AT2G07750.1 29.098 543 292 18 74 583 343 825 1.91e-54 199
Msa0209020 AT1G63250.1 29.650 543 289 18 74 583 296 778 1.47e-53 196
Msa0209020 AT4G16630.1 29.638 469 242 11 57 503 125 527 1.19e-52 193
Msa0209020 AT5G63120.2 32.924 407 203 13 108 503 178 525 8.93e-51 185
Msa0209020 AT1G71280.2 35.962 317 163 5 102 409 24 309 4.78e-50 177
Msa0209020 AT1G71280.1 35.737 319 165 5 102 411 24 311 7.19e-50 180
Msa0209020 AT1G77030.1 29.412 442 255 9 97 534 30 418 3.75e-48 181
Msa0209020 AT1G16280.1 29.655 435 237 10 70 495 34 408 3.93e-47 173
Msa0209020 AT1G20920.4 29.412 459 244 16 97 535 531 929 5.66e-47 178
Msa0209020 AT1G20920.6 29.412 459 244 16 97 535 531 929 5.66e-47 178
Msa0209020 AT1G20920.3 29.412 459 244 16 97 535 531 929 5.66e-47 178
Msa0209020 AT1G20920.7 29.412 459 244 16 97 535 531 929 5.66e-47 178
Msa0209020 AT1G20920.5 29.412 459 244 16 97 535 531 929 5.66e-47 178
Msa0209020 AT1G20920.1 29.412 459 244 16 97 535 531 929 5.66e-47 178
Msa0209020 AT1G20920.2 29.412 459 244 16 97 535 193 591 1.37e-46 176
Msa0209020 AT4G00660.1 29.427 384 216 6 97 480 133 461 4.53e-45 167
Msa0209020 AT4G00660.2 29.427 384 216 6 97 480 133 461 4.53e-45 167
Msa0209020 AT1G55150.1 29.298 413 236 10 95 503 99 459 4.58e-45 167
Msa0209020 AT1G55150.2 29.298 413 236 10 95 503 124 484 1.35e-44 166
Msa0209020 AT5G63120.1 36.129 310 174 10 108 406 178 474 1.77e-44 165
Msa0209020 AT5G63120.3 36.129 310 174 10 108 406 178 474 2.21e-44 165
Msa0209020 AT5G63120.4 36.129 310 174 10 108 406 178 474 2.21e-44 165
Msa0209020 AT5G63120.5 36.129 310 174 10 108 406 178 474 2.21e-44 165
Msa0209020 AT3G06480.1 29.440 411 227 11 96 499 436 790 2.98e-44 170
Msa0209020 AT3G06480.2 33.125 320 197 8 96 408 436 745 3.78e-42 162
Msa0209020 AT5G51280.1 30.026 383 208 9 119 492 170 501 5.36e-42 160
Msa0209020 AT3G61240.2 28.831 385 217 6 97 480 126 454 6.11e-42 159
Msa0209020 AT3G61240.1 28.831 385 217 6 97 480 126 454 6.11e-42 159
Msa0209020 AT2G45810.1 28.571 385 218 6 97 480 156 484 1.29e-41 158
Msa0209020 AT4G33370.1 31.186 388 207 9 114 492 116 452 2.74e-41 157
Msa0209020 AT2G47330.1 30.392 408 231 7 95 499 228 585 4.34e-41 159
Msa0209020 AT5G26742.1 26.711 453 245 8 88 504 65 466 7.71e-41 159
Msa0209020 AT5G26742.2 26.711 453 245 8 88 504 65 466 7.76e-41 159
Msa0209020 AT5G14610.2 27.907 430 247 11 96 514 162 539 1.28e-39 154
Msa0209020 AT5G14610.6 27.907 430 247 11 96 514 162 539 1.48e-39 154
Msa0209020 AT5G14610.5 27.907 430 247 11 96 514 170 547 1.95e-39 154
Msa0209020 AT3G01540.1 28.607 402 228 10 96 492 159 506 3.65e-39 152
Msa0209020 AT3G01540.4 28.607 402 228 10 96 492 159 506 3.68e-39 152
Msa0209020 AT3G01540.2 28.607 402 228 10 96 492 159 506 3.68e-39 152
Msa0209020 AT3G01540.3 28.607 402 228 10 96 492 159 506 3.68e-39 152
Msa0209020 AT5G14610.4 30.476 315 212 5 96 408 170 479 8.48e-39 150
Msa0209020 AT3G22330.1 27.570 428 238 12 75 491 85 451 5.68e-38 149
Msa0209020 AT5G14610.7 27.470 415 240 10 110 514 45 408 1.73e-37 146
Msa0209020 AT5G14610.3 27.470 415 240 10 110 514 45 408 1.73e-37 146
Msa0209020 AT3G22310.2 27.654 405 226 11 96 491 117 463 4.85e-37 146
Msa0209020 AT3G09620.2 28.372 430 205 15 97 510 399 741 5.01e-37 148
Msa0209020 AT3G09620.1 28.372 430 205 15 97 510 398 740 5.10e-37 148
Msa0209020 AT5G14610.1 27.532 385 226 7 110 492 244 577 5.26e-37 147
Msa0209020 AT3G22310.1 27.654 405 226 11 96 491 117 463 5.56e-37 146
Msa0209020 AT1G31970.1 29.949 394 209 9 114 494 133 472 1.40e-36 144
Msa0209020 AT2G42520.2 29.004 462 248 14 53 492 119 522 1.44e-36 145
Msa0209020 AT2G42520.1 29.004 462 248 14 53 492 119 522 1.44e-36 145
Msa0209020 AT2G42520.3 29.004 462 248 14 53 492 119 522 1.44e-36 145
Msa0209020 AT3G13920.3 27.913 412 233 12 94 500 28 380 1.97e-36 141
Msa0209020 AT3G13920.1 27.913 412 233 12 94 500 38 390 2.78e-36 140
Msa0209020 AT3G13920.2 27.913 412 233 12 94 500 38 390 4.01e-36 140
Msa0209020 AT3G13920.5 27.913 412 233 12 94 500 42 394 5.43e-36 140
Msa0209020 AT3G58570.1 29.017 417 222 11 96 492 147 509 5.60e-36 143
Msa0209020 AT5G26742.3 27.415 383 221 7 128 504 42 373 1.74e-35 142
Msa0209020 AT1G54270.1 27.427 412 235 11 94 500 38 390 2.15e-35 138
Msa0209020 AT2G33730.1 27.460 437 231 12 96 504 314 692 4.64e-35 141
Msa0209020 AT3G58510.1 28.873 426 231 13 96 503 152 523 6.43e-35 140
Msa0209020 AT3G58510.3 28.873 426 231 13 96 503 152 523 6.43e-35 140
Msa0209020 AT3G58510.2 28.873 426 231 13 96 503 152 523 6.43e-35 140
Msa0209020 AT3G19760.1 24.155 414 256 9 90 501 30 387 1.93e-34 135
Msa0209020 AT3G06980.1 25.652 460 261 10 74 503 352 760 4.01e-34 139
Msa0209020 AT1G51380.1 24.396 414 255 10 90 501 17 374 1.41e-33 132
Msa0209020 AT3G13920.4 27.427 412 230 13 94 500 38 385 1.46e-33 133
Msa0209020 AT4G09730.1 27.016 496 259 20 95 565 112 529 1.65e-33 136
Msa0209020 AT1G72730.1 26.601 406 236 10 95 496 41 388 3.76e-33 132
Msa0209020 AT3G02065.3 28.199 422 236 11 96 506 111 476 3.88e-33 133
Msa0209020 AT3G02065.2 28.199 422 236 11 96 506 111 476 3.88e-33 133
Msa0209020 AT5G11170.1 26.716 408 234 12 92 492 43 392 2.01e-32 130
Msa0209020 AT5G11200.1 26.716 408 234 12 92 492 43 392 2.01e-32 130
Msa0209020 AT1G54270.2 26.942 412 232 12 94 500 38 385 2.53e-32 129
Msa0209020 AT1G28180.1 29.167 384 200 13 125 496 3 326 3.52e-30 122
Msa0209020 AT3G02065.1 27.949 390 222 11 124 506 2 339 5.62e-30 122
Msa0209020 AT3G09720.2 26.303 422 248 10 85 501 130 493 9.00e-30 124
Msa0209020 AT3G09720.1 26.303 422 248 10 85 501 130 493 9.00e-30 124
Msa0209020 AT3G16840.1 23.553 501 266 11 96 527 191 643 9.85e-30 125
Msa0209020 AT3G16840.2 23.553 501 266 11 96 527 192 644 1.04e-29 125
Msa0209020 AT5G62190.1 28.460 383 203 12 121 489 122 447 8.42e-28 119
Msa0209020 AT5G11170.2 27.049 366 202 12 134 492 2 309 7.56e-27 112
Msa0209020 AT4G15850.1 23.684 456 230 12 102 490 38 442 1.05e-26 114
Msa0209020 AT5G11200.3 24.609 447 235 13 92 492 43 433 1.37e-26 114
Msa0209020 AT4G34910.1 25.126 398 274 10 95 481 46 430 2.31e-25 111
Msa0209020 AT1G51380.2 27.509 269 183 8 90 356 17 275 1.20e-23 101
Msa0209020 AT1G12770.2 23.485 396 248 9 72 415 88 480 2.62e-23 104
Msa0209020 AT1G12770.1 23.485 396 248 9 72 415 88 480 2.62e-23 104
Msa0209020 AT5G11200.2 24.590 427 278 17 92 492 43 451 4.41e-20 94.4
Msa0209020 AT1G51380.4 28.111 217 147 6 90 305 17 225 1.03e-19 90.5
Msa0209020 AT1G51380.3 28.111 217 147 6 90 305 17 225 1.97e-19 89.7
Msa0209020 AT3G53110.1 26.018 442 264 17 66 493 60 452 2.90e-17 85.5
Msa0209020 AT5G19210.2 24.873 394 217 13 113 480 94 434 1.81e-15 79.7
Msa0209020 AT1G59990.2 29.843 191 113 5 96 271 81 265 5.25e-15 78.6
Msa0209020 AT1G59990.1 29.843 191 113 5 96 271 81 265 5.55e-15 78.6
Msa0209020 AT1G28180.2 38.017 121 58 5 125 235 3 116 3.19e-11 61.2

Find 154 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TCTATCTCACTATGTAAAAT+TGG 0.127621 2_1:+45722076 None:intergenic
ACTACCAGAAATTCAATATT+AGG 0.152135 2_1:-45729074 None:intergenic
CAAACTTTGGGAAGGGTTAT+TGG 0.183409 2_1:-45727502 Msa0209020:CDS
TGTTCACCGCCTTGATTTAC+AGG 0.222982 2_1:-45723011 Msa0209020:intron
GATTCGGCCATGGTTGGTTT+TGG 0.260701 2_1:+45728971 None:intergenic
GGGATTCCTGCCAAAACTTT+GGG 0.274779 2_1:+45722097 None:intergenic
ATACCTTTGGAAGTATATTA+AGG 0.291178 2_1:+45726604 None:intergenic
AGCTTTGCAAAAGTTGAAAA+AGG 0.292081 2_1:+45725172 None:intergenic
GCTGATCTTCTTAAGTTCAT+TGG 0.307041 2_1:-45725248 Msa0209020:CDS
CGAAGAAATTGCAATTCTTC+AGG 0.312311 2_1:+45723568 None:intergenic
TTAGACTGTTTAAATATTCA+TGG 0.317326 2_1:-45725224 Msa0209020:CDS
GAAGCTGAGCGCATTGTTAA+AGG 0.326789 2_1:-45727460 Msa0209020:CDS
ACGGCACACTTCAGCGATTC+TGG 0.332555 2_1:+45724580 None:intergenic
AACTAGAGAGCTTGCCATTC+AGG 0.336917 2_1:-45727690 Msa0209020:intron
CTACCAGAAATTCAATATTA+GGG 0.340394 2_1:-45729073 None:intergenic
ATTGCAATTCTTCAGGAATC+AGG 0.344105 2_1:+45723575 None:intergenic
TTCCTGCCAAAACTTTGGGG+TGG 0.344711 2_1:+45722101 None:intergenic
CTCTGGCCAAAGAGGCTTAT+AGG 0.347055 2_1:-45723081 Msa0209020:CDS
CACTGTTGAAGGATTGGAAC+AGG 0.351265 2_1:-45725387 Msa0209020:CDS
TCTTGTAACTGTCGTTGATT+TGG 0.359039 2_1:+45728918 None:intergenic
GGCTTATAGGTCATATATAT+TGG 0.360206 2_1:-45723068 Msa0209020:CDS
AGGTTATCATTCACAAACTT+TGG 0.361306 2_1:-45727515 Msa0209020:CDS
ACACAAATAATCTAACGAAT+TGG 0.363585 2_1:+45721938 None:intergenic
AGCGATTCCGCCACTATTGA+TGG 0.364721 2_1:-45727843 Msa0209020:CDS
ACTTATGAAGCATCGTTTGC+AGG 0.366178 2_1:-45722171 Msa0209020:three_prime_UTR
GGTGCTGCGAGGACGGGTTC+TGG 0.370158 2_1:-45727806 Msa0209020:CDS
TGGGATTCCTGCCAAAACTT+TGG 0.370427 2_1:+45722096 None:intergenic
ATATGACCTATAAGCCTCTT+TGG 0.372379 2_1:+45723075 None:intergenic
CTGCCAAAACTTTGGGGTGG+GGG 0.378103 2_1:+45722104 None:intergenic
GAGCTGTTCTACCCACTCTA+TGG 0.378274 2_1:+45723632 None:intergenic
TCCTGCCAAAACTTTGGGGT+GGG 0.383583 2_1:+45722102 None:intergenic
TGATGAAGCAGACAGGATAT+TGG 0.387298 2_1:-45726658 Msa0209020:CDS
GTGGTTGTCGTTGTCGGATT+CGG 0.395506 2_1:+45728955 None:intergenic
GCAATTTCTTCGCTACTTGA+AGG 0.402234 2_1:-45723557 Msa0209020:intron
GGTTATCATTCACAAACTTT+GGG 0.404251 2_1:-45727514 Msa0209020:CDS
CCAAGGGCCTTGGGAGGCAT+AGG 0.407193 2_1:+45724619 None:intergenic
CTATCTCACTATGTAAAATT+GGG 0.408169 2_1:+45722077 None:intergenic
AAAATGTTACCTGAGTCATA+TGG 0.414115 2_1:+45728612 None:intergenic
TATTGGTGGTGTGGGTAGAA+AGG 0.417674 2_1:-45727485 Msa0209020:CDS
TGAGATGTGGTTGTCGTTGT+CGG 0.421675 2_1:+45728949 None:intergenic
TGTTCTTGGTGCTGCGAGGA+CGG 0.423795 2_1:-45727813 Msa0209020:CDS
GTTGATTAGAAGTTTAAGAC+TGG 0.434577 2_1:-45722029 Msa0209020:three_prime_UTR
AGAAGCACCTTTGGTTCATC+AGG 0.435836 2_1:+45723751 None:intergenic
AAGCACTGCTGTCTATGTTC+AGG 0.438576 2_1:+45722293 None:intergenic
AGCATCGTTTGCAGGAGATA+TGG 0.439835 2_1:-45722163 Msa0209020:three_prime_UTR
GTTCTTGGTGCTGCGAGGAC+GGG 0.441728 2_1:-45727812 Msa0209020:CDS
ATTGGTGGTGTGGGTAGAAA+GGG 0.443352 2_1:-45727484 Msa0209020:CDS
ATCTAACGAATTGGAAATGC+AGG 0.447401 2_1:+45721947 None:intergenic
GGAAGGGTTATTGGTGGTGT+GGG 0.448057 2_1:-45727493 Msa0209020:CDS
GGGAAGGGTTATTGGTGGTG+TGG 0.455388 2_1:-45727494 Msa0209020:CDS
GACCACCTTCAGAATACAAA+AGG 0.463946 2_1:-45727400 Msa0209020:CDS
GAAAACAAAAGCAGAATTCT+CGG 0.465182 2_1:-45725202 Msa0209020:CDS
GAGAAACAGTGTCTAGCTGC+GGG 0.475718 2_1:+45729036 None:intergenic
CCTATGCCTCCCAAGGCCCT+TGG 0.478193 2_1:-45724619 Msa0209020:CDS
TTCACACCTCGTAATGGAAC+TGG 0.480851 2_1:-45727731 Msa0209020:CDS
TTCAAATGTACAGTCTCAAC+TGG 0.484689 2_1:-45723230 Msa0209020:intron
GGAGGAAGAAGACATTGATC+AGG 0.484698 2_1:-45722238 Msa0209020:exon
GTCTATGTTGATGTAGATGT+TGG 0.487585 2_1:-45725507 Msa0209020:CDS
GCAGGTCACTGTTGAAGGAT+TGG 0.488024 2_1:-45725393 Msa0209020:intron
CCTGCCAAAACTTTGGGGTG+GGG 0.488767 2_1:+45722103 None:intergenic
TTCAGCCACACAAACAAAGA+AGG 0.488772 2_1:-45725793 Msa0209020:intron
GTTATCTCAACGTACTTCTC+AGG 0.490712 2_1:-45728657 Msa0209020:CDS
TTGATGGGAAAGGATGTTCT+TGG 0.491150 2_1:-45727827 Msa0209020:CDS
TAACACGGACCAAGGGCCTT+GGG 0.493670 2_1:+45724610 None:intergenic
AAATGTTACCTGAGTCATAT+GGG 0.494393 2_1:+45728613 None:intergenic
GGTAGAACAGCTCGTGGGGA+AGG 0.501824 2_1:-45723622 Msa0209020:CDS
AACAACAAAACGCTTGGCAC+AGG 0.502377 2_1:+45725349 None:intergenic
ACAGCAGTGCTTCGAAGCAT+AGG 0.502834 2_1:-45722282 Msa0209020:CDS
ATGTTCAGGCTTATCTTCGG+TGG 0.505410 2_1:+45722307 None:intergenic
ATAACACGGACCAAGGGCCT+TGG 0.505876 2_1:+45724609 None:intergenic
ACATCCTTTCCCATCAATAG+TGG 0.507013 2_1:+45727833 None:intergenic
GTCGTTGTCGGATTCGGCCA+TGG 0.511718 2_1:+45728961 None:intergenic
TCGATGCAGGTCACTGTTGA+AGG 0.512599 2_1:-45725398 Msa0209020:intron
TGTTCAGGCTTATCTTCGGT+GGG 0.515684 2_1:+45722308 None:intergenic
CGTTTATCATTTGAACACTC+TGG 0.518088 2_1:-45723098 Msa0209020:CDS
CCGTAGTTGTGCTGGGTGAG+AGG 0.519603 2_1:+45724275 None:intergenic
ATCGCTGAAGTGTGCCGTTG+TGG 0.520471 2_1:-45724575 Msa0209020:CDS
ATCATTCACAAACTTTGGGA+AGG 0.522110 2_1:-45727510 Msa0209020:CDS
GCTCGTGGGGAAGGTGGAAA+AGG 0.522429 2_1:-45723613 Msa0209020:CDS
GTGCAATTCACACCTCGTAA+TGG 0.522434 2_1:-45727737 Msa0209020:CDS
TCTATGTTCAGGCTTATCTT+CGG 0.523381 2_1:+45722304 None:intergenic
TTGTACAACAATTCCACAGC+TGG 0.523673 2_1:+45727761 None:intergenic
TGTACTGATGTTGCTGCTCG+TGG 0.524024 2_1:-45725131 Msa0209020:CDS
AAAATATAACATACCACAGC+AGG 0.526613 2_1:+45725098 None:intergenic
TGCTATCAGAAAGAGATGTA+TGG 0.529379 2_1:+45721852 None:intergenic
ATATAATGCACATTCTATGA+AGG 0.531303 2_1:-45723044 Msa0209020:CDS
TGGTTAATTTCAGGCAGCAA+AGG 0.534234 2_1:-45723290 Msa0209020:intron
AGAACAGCTCGTGGGGAAGG+TGG 0.535890 2_1:-45723619 Msa0209020:CDS
TGAAGCTGCTGGTTGTTCTG+TGG 0.536565 2_1:+45729008 None:intergenic
TCGCTGAAGTGTGCCGTTGT+GGG 0.540483 2_1:-45724574 Msa0209020:CDS
ACATCTACATCAACATAGAC+AGG 0.540616 2_1:+45725510 None:intergenic
TGAATGGCAAGCTCTCTAGT+TGG 0.540963 2_1:+45727692 None:intergenic
TAGTTGCTGTTGTAGTTCGC+TGG 0.541185 2_1:-45721813 Msa0209020:three_prime_UTR
TTGTCGGATTCGGCCATGGT+TGG 0.541704 2_1:+45728965 None:intergenic
ACAAACCTTCTTTGTTTGTG+TGG 0.544416 2_1:+45725788 None:intergenic
AAAGTTGTACCTGTAAATCA+AGG 0.551261 2_1:+45723002 None:intergenic
AGCACCTTTGGTTCATCAGG+TGG 0.559062 2_1:+45723754 None:intergenic
TCATTCACAAACTTTGGGAA+GGG 0.560825 2_1:-45727509 Msa0209020:CDS
AAAGATATTCAGACTATAAG+CGG 0.561141 2_1:-45722196 Msa0209020:three_prime_UTR
TCATGATTGATGAAGCAGAC+AGG 0.562765 2_1:-45726665 Msa0209020:CDS
CCTTTAGGAGAGTTCAGTTG+AGG 0.563580 2_1:-45724308 Msa0209020:intron
CCTCTCACCCAGCACAACTA+CGG 0.563804 2_1:-45724275 Msa0209020:intron
GATATTGGAATCAAACTTCG+AGG 0.564037 2_1:-45726643 Msa0209020:CDS
CAAGGGCCTTGGGAGGCATA+GGG 0.565452 2_1:+45724620 None:intergenic
TTTGAACACTCTGGCCAAAG+AGG 0.565593 2_1:-45723089 Msa0209020:CDS
TCAAATGCATACTCTTTCAC+AGG 0.570584 2_1:+45723265 None:intergenic
TGTGCTGGGTGAGAGGGATG+CGG 0.571240 2_1:+45724282 None:intergenic
GATCCTTAATATACTTCCAA+AGG 0.575304 2_1:-45726607 Msa0209020:intron
TCTATGTTGATGTAGATGTT+GGG 0.575438 2_1:-45725506 Msa0209020:CDS
CGTAGTTGTGCTGGGTGAGA+GGG 0.579490 2_1:+45724276 None:intergenic
TGCAATCCCTATGCCTCCCA+AGG 0.579918 2_1:-45724626 Msa0209020:CDS
ATACAGAACAACAAAACGCT+TGG 0.583322 2_1:+45725343 None:intergenic
TTAGGAGAGTTCAGTTGAGG+TGG 0.585301 2_1:-45724305 Msa0209020:intron
CCAGGAATATATCCATAGAG+TGG 0.585388 2_1:-45723644 Msa0209020:intron
TCCGCCACTATTGATGGGAA+AGG 0.586065 2_1:-45727837 Msa0209020:CDS
ACTTTGGGAAGGGTTATTGG+TGG 0.589313 2_1:-45727499 Msa0209020:CDS
GGATTCCTGCCAAAACTTTG+GGG 0.589827 2_1:+45722098 None:intergenic
TGGGTTTGTAAAACAGAATG+AGG 0.590759 2_1:+45722327 None:intergenic
GCGATTCCGCCACTATTGAT+GGG 0.593656 2_1:-45727842 Msa0209020:CDS
AATCTGTTGATTGCAACGCC+TGG 0.596623 2_1:-45727433 Msa0209020:CDS
TGTAGATGTTGGGAGAGAAA+AGG 0.599377 2_1:-45725496 Msa0209020:intron
ACCAATTCCAAAACCAACCA+TGG 0.603051 2_1:-45728978 Msa0209020:exon
TGGTGAAGCAATGAAGCTGC+TGG 0.606760 2_1:+45728997 None:intergenic
ACAACAAAACGCTTGGCACA+GGG 0.609917 2_1:+45725350 None:intergenic
GAGTGGGTAGAACAGCTCGT+GGG 0.615135 2_1:-45723627 Msa0209020:CDS
TCCTTTCCCATCAATAGTGG+CGG 0.616524 2_1:+45727836 None:intergenic
CAGGAATATATCCATAGAGT+GGG 0.617159 2_1:-45723643 Msa0209020:CDS
AGGTGTCTGAAAAGACAAGC+GGG 0.623455 2_1:+45725533 None:intergenic
TGAGAAACAGTGTCTAGCTG+CGG 0.625550 2_1:+45729035 None:intergenic
GTGGCGAGTGAGCTAATGAA+AGG 0.627012 2_1:-45727535 Msa0209020:CDS
TTGCTGTTGTAGTTCGCTGG+TGG 0.627437 2_1:-45721810 Msa0209020:three_prime_UTR
TGATCCACCTGATGAACCAA+AGG 0.628732 2_1:-45723758 Msa0209020:intron
AGCATGTGTGTATACCTGAA+TGG 0.632411 2_1:+45727676 None:intergenic
AGGTGGTCAAGAAGACGACC+AGG 0.633657 2_1:+45727415 None:intergenic
AGTGGGTAGAACAGCTCGTG+GGG 0.633736 2_1:-45723626 Msa0209020:CDS
GTACGTCATAACACGGACCA+AGG 0.638955 2_1:+45724602 None:intergenic
AGAGTGGGTAGAACAGCTCG+TGG 0.641253 2_1:-45723628 Msa0209020:CDS
TGGACTTGACATACCTGCTG+TGG 0.647715 2_1:-45725111 Msa0209020:intron
TACGTCATAACACGGACCAA+GGG 0.647920 2_1:+45724603 None:intergenic
AGTGTTCAAATGATAAACGC+TGG 0.651201 2_1:+45723102 None:intergenic
GAGGTGTCTGAAAAGACAAG+CGG 0.655705 2_1:+45725532 None:intergenic
TGAACTTAAGAAGATCAGCA+TGG 0.656163 2_1:+45725252 None:intergenic
CACGGACCAAGGGCCTTGGG+AGG 0.656454 2_1:+45724613 None:intergenic
GAAGAGAAGAACGATAAAGA+CGG 0.667589 2_1:-45728770 Msa0209020:CDS
TCATTACTCAGAATTCCAGA+AGG 0.674765 2_1:+45728698 None:intergenic
ACTGTTGAAGGATTGGAACA+GGG 0.682019 2_1:-45725386 Msa0209020:CDS
AGGATGTTCTTGGTGCTGCG+AGG 0.692441 2_1:-45727817 Msa0209020:CDS
ATTACACCAGTTCCATTACG+AGG 0.692682 2_1:+45727725 None:intergenic
ATTGGAATCAAACTTCGAGG+AGG 0.698846 2_1:-45726640 Msa0209020:CDS
ACTCACGATTTCACCCACAA+CGG 0.704262 2_1:+45724561 None:intergenic
TCTACATCAACATAGACAGG+AGG 0.714076 2_1:+45725513 None:intergenic
GATTCTGGTACGTCATAACA+CGG 0.726522 2_1:+45724595 None:intergenic
AGAAACAGTGTCTAGCTGCG+GGG 0.741896 2_1:+45729037 None:intergenic
GTTGTACCTGTAAATCAAGG+CGG 0.751531 2_1:+45723005 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AACATATAATATAATCTATT+TGG + chr2_1:45724456-45724475 None:intergenic 10.0%
!! AAGTAATCATATATATATAT+TGG + chr2_1:45724556-45724575 None:intergenic 10.0%
!!! GTATTAAATCATTTTTTAAT+TGG + chr2_1:45727669-45727688 None:intergenic 10.0%
!!! TTTTTACTAATTGATCAAAT+AGG - chr2_1:45722295-45722314 Msa0209020:CDS 15.0%
!! ACAAAAAACAATTTAACATT+AGG + chr2_1:45722650-45722669 None:intergenic 15.0%
!! ATCAAAATAAAATTTAAACG+AGG + chr2_1:45723206-45723225 None:intergenic 15.0%
!! ATTCATATATAAAAACTTGA+AGG - chr2_1:45723474-45723493 Msa0209020:intron 15.0%
!! TAAAACATAAAATCAAATTG+AGG - chr2_1:45723722-45723741 Msa0209020:intron 15.0%
!! AAAACATAAAATCAAATTGA+GGG - chr2_1:45723723-45723742 Msa0209020:intron 15.0%
!! TATCTTGTTAATACATTTAA+AGG - chr2_1:45724838-45724857 Msa0209020:intron 15.0%
!!! GGTTTTTTATTTTAAAAAAC+AGG + chr2_1:45726389-45726408 None:intergenic 15.0%
!! ACTAATGATAAAAAATGTAA+AGG - chr2_1:45726833-45726852 Msa0209020:intron 15.0%
!! AAAAATAAAATTCATGATTC+AGG + chr2_1:45727540-45727559 None:intergenic 15.0%
!!! AATCATGAATTTTATTTTTG+TGG - chr2_1:45727541-45727560 Msa0209020:CDS 15.0%
!!! CATGTTTTTTTTTTTTTTGA+AGG - chr2_1:45728177-45728196 Msa0209020:intron 15.0%
!! TTGATAAAATTATAGTTTCT+GGG - chr2_1:45728224-45728243 Msa0209020:intron 15.0%
!!! AGTTTATAAAGACACAATTT+TGG - chr2_1:45722491-45722510 Msa0209020:intron 20.0%
!! TATGCTAGATTATACAATAA+GGG + chr2_1:45722604-45722623 None:intergenic 20.0%
!! TTATGCTAGATTATACAATA+AGG + chr2_1:45722605-45722624 None:intergenic 20.0%
!! TTATTGTATAATCTAGCATA+AGG - chr2_1:45722604-45722623 Msa0209020:intron 20.0%
!!! GTTGTTTTTATAAGCTATAT+TGG - chr2_1:45722679-45722698 Msa0209020:intron 20.0%
!!! CAAATTGTTTTTTCGTATTA+TGG - chr2_1:45722827-45722846 Msa0209020:intron 20.0%
!! TCATAATTTACTTCAATGAA+TGG - chr2_1:45722964-45722983 Msa0209020:intron 20.0%
!! CATGTAATTAAGAATCAAAT+CGG + chr2_1:45723507-45723526 None:intergenic 20.0%
!! AAACATAAAATCAAATTGAG+GGG - chr2_1:45723724-45723743 Msa0209020:intron 20.0%
!!! TCTGCTTATTTTTTTATTGA+TGG - chr2_1:45724036-45724055 Msa0209020:intron 20.0%
!!! CTGCTTATTTTTTTATTGAT+GGG - chr2_1:45724037-45724056 Msa0209020:intron 20.0%
!! GATATATAAACTAACATAGA+AGG + chr2_1:45724100-45724119 None:intergenic 20.0%
!! ATCATTATCATTATAACTTC+TGG - chr2_1:45724117-45724136 Msa0209020:intron 20.0%
!! TATATGTGTTCATTATATAG+AGG - chr2_1:45724328-45724347 Msa0209020:intron 20.0%
!! ATATGTGTTCATTATATAGA+GGG - chr2_1:45724329-45724348 Msa0209020:intron 20.0%
!!! TTGTAACATTCTAAAAATAG+TGG - chr2_1:45724723-45724742 Msa0209020:intron 20.0%
!! TGTTAATACATTTAAAGGTT+TGG - chr2_1:45724843-45724862 Msa0209020:intron 20.0%
!!! GCTTTTTTATATCTAGATTT+TGG - chr2_1:45724963-45724982 Msa0209020:intron 20.0%
!!! ATATTTTCCTGTTTAATTAC+AGG - chr2_1:45725283-45725302 Msa0209020:CDS 20.0%
!! TTAGACTGTTTAAATATTCA+TGG - chr2_1:45725627-45725646 Msa0209020:intron 20.0%
!! AACAGTAGAATATATCTTAA+AGG - chr2_1:45726063-45726082 Msa0209020:intron 20.0%
!! TGAAATTTGGATGAAAAAAT+AGG - chr2_1:45726094-45726113 Msa0209020:intron 20.0%
!! AAAAGAAATAAAACTGAGTT+GGG + chr2_1:45726638-45726657 None:intergenic 20.0%
!! AAAAAGAAATAAAACTGAGT+TGG + chr2_1:45726639-45726658 None:intergenic 20.0%
!!! TTGAAAATAAAAGAGTGTTT+GGG + chr2_1:45726708-45726727 None:intergenic 20.0%
!!! ATTGAAAATAAAAGAGTGTT+TGG + chr2_1:45726709-45726728 None:intergenic 20.0%
!!! CTAAGCTTTAAAAATAAAAG+AGG + chr2_1:45726740-45726759 None:intergenic 20.0%
!! TGTTATGCTTATATTGTAAA+GGG - chr2_1:45727420-45727439 Msa0209020:CDS 20.0%
!!! TTATTTTTGTGGTTAATTTC+AGG - chr2_1:45727552-45727571 Msa0209020:intron 20.0%
!!! GTTGATAAAATTATAGTTTC+TGG - chr2_1:45728223-45728242 Msa0209020:intron 20.0%
! AATAGGTAGAAATAAAACGA+AGG - chr2_1:45722312-45722331 Msa0209020:CDS 25.0%
!! AAGTTTGTAAATGTTGTTTG+TGG - chr2_1:45722462-45722481 Msa0209020:intron 25.0%
! TAAGTTATATGAGACTGTTT+GGG + chr2_1:45722769-45722788 None:intergenic 25.0%
! ATAAGTTATATGAGACTGTT+TGG + chr2_1:45722770-45722789 None:intergenic 25.0%
! AAACAGTCTCATATAACTTA+TGG - chr2_1:45722769-45722788 Msa0209020:intron 25.0%
! AAGTAAATTATGAGTCTGTT+TGG + chr2_1:45722957-45722976 None:intergenic 25.0%
! CGATTTGATTCTTAATTACA+TGG - chr2_1:45723505-45723524 Msa0209020:intron 25.0%
!!! ATGGTTTTGTAGACAAATTA+CGG - chr2_1:45723606-45723625 Msa0209020:CDS 25.0%
!! TTTTCCTTCTAAACAACAAA+AGG + chr2_1:45723702-45723721 None:intergenic 25.0%
! ATGGGATTATCAATGTTAAT+TGG + chr2_1:45723814-45723833 None:intergenic 25.0%
!! AACATTGATAATCCCATAAT+AGG - chr2_1:45723817-45723836 Msa0209020:intron 25.0%
! GGACATATACAAAAGAAAAA+GGG + chr2_1:45724005-45724024 None:intergenic 25.0%
! AGGACATATACAAAAGAAAA+AGG + chr2_1:45724006-45724025 None:intergenic 25.0%
! AATAAGCAGAGATAAACAAT+AGG + chr2_1:45724026-45724045 None:intergenic 25.0%
!! ATACCTTTGGAAGTATATTA+AGG + chr2_1:45724250-45724269 None:intergenic 25.0%
!! TAATATACTTCCAAAGGTAT+TGG - chr2_1:45724250-45724269 Msa0209020:intron 25.0%
!!! ATTGCTGAAGTATTTTTCAT+GGG + chr2_1:45724308-45724327 None:intergenic 25.0%
!!! AATTGCTGAAGTATTTTTCA+TGG + chr2_1:45724309-45724328 None:intergenic 25.0%
! TGTAAAGAAGAAACATGTAT+AGG - chr2_1:45724486-45724505 Msa0209020:intron 25.0%
!!! TATAGGTAACTTTTTTCAGA+AGG - chr2_1:45724503-45724522 Msa0209020:intron 25.0%
! ACAAGATGCTAAATAATACA+AGG - chr2_1:45724589-45724608 Msa0209020:CDS 25.0%
! ACAAGATACCACAAATATTT+GGG + chr2_1:45724826-45724845 None:intergenic 25.0%
! AACAAGATACCACAAATATT+TGG + chr2_1:45724827-45724846 None:intergenic 25.0%
!!! TTTTTGAAAGTTGGAAATCT+TGG - chr2_1:45725220-45725239 Msa0209020:CDS 25.0%
!!! TTTTGAAAGTTGGAAATCTT+GGG - chr2_1:45725221-45725240 Msa0209020:CDS 25.0%
! TGCTGTAAAGAAAATTTCAA+AGG + chr2_1:45725406-45725425 None:intergenic 25.0%
! ATACCAATCAAAAAAAGTGA+TGG - chr2_1:45725545-45725564 Msa0209020:CDS 25.0%
! TGACAACTTAATTATATTGC+AGG + chr2_1:45725808-45725827 None:intergenic 25.0%
! ATAATGAAGATACTGAAAGA+AGG - chr2_1:45725918-45725937 Msa0209020:intron 25.0%
! TAATGAAGATACTGAAAGAA+GGG - chr2_1:45725919-45725938 Msa0209020:intron 25.0%
! TAGAATATATCTTAAAGGCT+TGG - chr2_1:45726068-45726087 Msa0209020:intron 25.0%
!!! TTTTTTGCCTATATGTGAAT+TGG - chr2_1:45726512-45726531 Msa0209020:intron 25.0%
! ATAACAACCAATTCACATAT+AGG + chr2_1:45726522-45726541 None:intergenic 25.0%
! GTACAAAAGTTTCAACATAA+AGG - chr2_1:45726863-45726882 Msa0209020:intron 25.0%
! GTTAGTTGTTCTGTTTAATT+TGG - chr2_1:45726932-45726951 Msa0209020:intron 25.0%
! TCTTAGTACTATTGTAAAAC+TGG - chr2_1:45726956-45726975 Msa0209020:intron 25.0%
!!! TAAAAAATAAGAAGCACCTT+TGG + chr2_1:45727112-45727131 None:intergenic 25.0%
!!! AAGGTGCTTCTTATTTTTTA+TGG - chr2_1:45727112-45727131 Msa0209020:intron 25.0%
! GTCTAACATATGTTATTCTA+TGG - chr2_1:45727181-45727200 Msa0209020:intron 25.0%
!!! TATTGCAACTTTTAAGATCA+AGG + chr2_1:45727374-45727393 None:intergenic 25.0%
! GATCTTAAAAGTTGCAATAT+AGG - chr2_1:45727375-45727394 Msa0209020:intron 25.0%
! ATATAAGCATAACACATTCA+AGG + chr2_1:45727414-45727433 None:intergenic 25.0%
! GTGTTATGCTTATATTGTAA+AGG - chr2_1:45727419-45727438 Msa0209020:CDS 25.0%
! GTTATGCTTATATTGTAAAG+GGG - chr2_1:45727421-45727440 Msa0209020:CDS 25.0%
! TTATGCTTATATTGTAAAGG+GGG - chr2_1:45727422-45727441 Msa0209020:CDS 25.0%
!! CTAATTTTATACACTTCCAA+GGG + chr2_1:45727465-45727484 None:intergenic 25.0%
! ATATAATGCACATTCTATGA+AGG - chr2_1:45727807-45727826 Msa0209020:CDS 25.0%
!! TCTCATCACATTTTACATAA+TGG - chr2_1:45727871-45727890 Msa0209020:intron 25.0%
! TGAAACTAAAATGAGTAAGT+TGG - chr2_1:45728119-45728138 Msa0209020:intron 25.0%
! GAAGATAAATACAATTAGAG+TGG - chr2_1:45728250-45728269 Msa0209020:intron 25.0%
! TCATTCATGAGAAAGAAAAA+GGG + chr2_1:45728318-45728337 None:intergenic 25.0%
! TTAATTGTAGTCATCATAGT+AGG + chr2_1:45728468-45728487 None:intergenic 25.0%
! ACTATTTACTGTATTTGTGT+AGG - chr2_1:45728492-45728511 Msa0209020:intron 25.0%
! TAGGAAGAAAATTCAAAAAG+TGG - chr2_1:45728588-45728607 Msa0209020:intron 25.0%
! AAGAAAATTCAAAAAGTGGA+AGG - chr2_1:45728592-45728611 Msa0209020:intron 25.0%
!! GTCTGAATATCTTTTCTATA+AGG + chr2_1:45728649-45728668 None:intergenic 25.0%
! AAAGATATTCAGACTATAAG+CGG - chr2_1:45728655-45728674 Msa0209020:CDS 25.0%
! CTATCTCACTATGTAAAATT+GGG + chr2_1:45728777-45728796 None:intergenic 25.0%
! TCTATCTCACTATGTAAAAT+TGG + chr2_1:45728778-45728797 None:intergenic 25.0%
! ACACAAATAATCTAACGAAT+TGG + chr2_1:45728916-45728935 None:intergenic 25.0%
CAGAAAAAGATCTCGTAAAT+TGG - chr2_1:45721978-45721997 Msa0209020:three_prime_UTR 30.0%
AAAACAACAACAACAACTAG+AGG - chr2_1:45722014-45722033 Msa0209020:three_prime_UTR 30.0%
AAATGTTACCTGAGTCATAT+GGG + chr2_1:45722241-45722260 None:intergenic 30.0%
AAAATGTTACCTGAGTCATA+TGG + chr2_1:45722242-45722261 None:intergenic 30.0%
AAAATAAGCCTAATCCAAAC+GGG + chr2_1:45722389-45722408 None:intergenic 30.0%
CAAAATAAGCCTAATCCAAA+CGG + chr2_1:45722390-45722409 None:intergenic 30.0%
! AGAAGTTACGAAATTAGCTT+AGG + chr2_1:45722746-45722765 None:intergenic 30.0%
TGTATGACATGTTCATAACA+TGG + chr2_1:45722865-45722884 None:intergenic 30.0%
! AAGCACTAATGAGACTTTTT+GGG + chr2_1:45722905-45722924 None:intergenic 30.0%
! TAAGCACTAATGAGACTTTT+TGG + chr2_1:45722906-45722925 None:intergenic 30.0%
AAAAGTCTCATTAGTGCTTA+TGG - chr2_1:45722906-45722925 Msa0209020:intron 30.0%
AGGTTATCATTCACAAACTT+TGG - chr2_1:45723336-45723355 Msa0209020:intron 30.0%
GGTTATCATTCACAAACTTT+GGG - chr2_1:45723337-45723356 Msa0209020:intron 30.0%
! TGAATCCTTTTGTATTCTGA+AGG + chr2_1:45723459-45723478 None:intergenic 30.0%
ATGCATTTCGTTCATTGTAA+TGG - chr2_1:45723587-45723606 Msa0209020:CDS 30.0%
!!! TGGTTTTGTAGACAAATTAC+GGG - chr2_1:45723607-45723626 Msa0209020:CDS 30.0%
!!! ACATCCTTTTGTTGTTTAGA+AGG - chr2_1:45723695-45723714 Msa0209020:intron 30.0%
ATAAAATCAAATTGAGGGGA+AGG - chr2_1:45723728-45723747 Msa0209020:intron 30.0%
CTCACGTTAATTCCTATTAT+GGG + chr2_1:45723832-45723851 None:intergenic 30.0%
! TGAATTCTGTTGAGTAGTTT+TGG - chr2_1:45723893-45723912 Msa0209020:intron 30.0%
GATTTATTCTTCATCGTGTA+TGG - chr2_1:45723964-45723983 Msa0209020:intron 30.0%
ATCATTATAACTTCTGGTGT+TGG - chr2_1:45724123-45724142 Msa0209020:intron 30.0%
GATCCTTAATATACTTCCAA+AGG - chr2_1:45724244-45724263 Msa0209020:intron 30.0%
!! TTGCTGAAGTATTTTTCATG+GGG + chr2_1:45724307-45724326 None:intergenic 30.0%
! GCACTGTTGATGAAAATTAA+TGG - chr2_1:45724415-45724434 Msa0209020:intron 30.0%
ATATTGGTCAAAAAGACTAC+AGG + chr2_1:45724540-45724559 None:intergenic 30.0%
! AGCAGAATAAACTACTCTTT+TGG + chr2_1:45724624-45724643 None:intergenic 30.0%
! TAGTAGGTAGGTATATTTTC+TGG - chr2_1:45724780-45724799 Msa0209020:intron 30.0%
CTTCTCATTTCTAACAGAAA+AGG - chr2_1:45725021-45725040 Msa0209020:intron 30.0%
! GAAACAAGGATTTGCTTTAA+GGG + chr2_1:45725119-45725138 None:intergenic 30.0%
! TGAAACAAGGATTTGCTTTA+AGG + chr2_1:45725120-45725139 None:intergenic 30.0%
GAGTTGACAAAATTGAAACA+AGG + chr2_1:45725133-45725152 None:intergenic 30.0%
!!! TGCATGCTATTTTTGAAAGT+TGG - chr2_1:45725211-45725230 Msa0209020:CDS 30.0%
TCTATGTTGATGTAGATGTT+GGG - chr2_1:45725345-45725364 Msa0209020:CDS 30.0%
!!! ACACCATCACTTTTTTTGAT+TGG + chr2_1:45725551-45725570 None:intergenic 30.0%
GAAAACAAAAGCAGAATTCT+CGG - chr2_1:45725649-45725668 Msa0209020:intron 30.0%
AGCTTTGCAAAAGTTGAAAA+AGG + chr2_1:45725682-45725701 None:intergenic 30.0%
! AACTTTTGCAAAGCTGAAAA+AGG - chr2_1:45725687-45725706 Msa0209020:intron 30.0%
! ACTTTTGCAAAGCTGAAAAA+GGG - chr2_1:45725688-45725707 Msa0209020:intron 30.0%
AAAATATAACATACCACAGC+AGG + chr2_1:45725756-45725775 None:intergenic 30.0%
! CTTTAAAAAGGAAGGTTGTA+TGG + chr2_1:45725871-45725890 None:intergenic 30.0%
AATGAAGATACTGAAAGAAG+GGG - chr2_1:45725920-45725939 Msa0209020:intron 30.0%
TTACTGTTGGATATGAAATC+CGG - chr2_1:45725985-45726004 Msa0209020:intron 30.0%
TATAGGCAAAAAACAGAGAA+GGG + chr2_1:45726505-45726524 None:intergenic 30.0%
ATATAGGCAAAAAACAGAGA+AGG + chr2_1:45726506-45726525 None:intergenic 30.0%
GAATTGGTTGTTATACCTTT+AGG - chr2_1:45726528-45726547 Msa0209020:intron 30.0%
CTTTAAACTCTATGTTTGTG+AGG - chr2_1:45726660-45726679 Msa0209020:CDS 30.0%
CAACTAACAACTAGGAATAT+GGG + chr2_1:45726920-45726939 None:intergenic 30.0%
ACAACTAACAACTAGGAATA+TGG + chr2_1:45726921-45726940 None:intergenic 30.0%
AAACAGAACAACTAACAACT+AGG + chr2_1:45726928-45726947 None:intergenic 30.0%
TCAGATTCTACTCTCTTTAT+AGG - chr2_1:45727317-45727336 Msa0209020:intron 30.0%
CAGATTCTACTCTCTTTATA+GGG - chr2_1:45727318-45727337 Msa0209020:intron 30.0%
AGATTCTACTCTCTTTATAG+GGG - chr2_1:45727319-45727338 Msa0209020:intron 30.0%
! CCTAATTTTATACACTTCCA+AGG + chr2_1:45727466-45727485 None:intergenic 30.0%
! CCTTGGAAGTGTATAAAATT+AGG - chr2_1:45727463-45727482 Msa0209020:CDS 30.0%
! TGGAAGTGTATAAAATTAGG+CGG - chr2_1:45727466-45727485 Msa0209020:CDS 30.0%
!!! CATTTTTTAATTGGCACTTG+AGG + chr2_1:45727660-45727679 None:intergenic 30.0%
TTATCTTACACAGTATCATC+TGG - chr2_1:45727704-45727723 Msa0209020:CDS 30.0%
GGCTTATAGGTCATATATAT+TGG - chr2_1:45727783-45727802 Msa0209020:CDS 30.0%
AAAGTTGTACCTGTAAATCA+AGG + chr2_1:45727852-45727871 None:intergenic 30.0%
ACCAACCTGAAATAAATCAA+CGG - chr2_1:45727994-45728013 Msa0209020:intron 30.0%
AAAAATATGAAGAGTCCAAG+AGG + chr2_1:45728020-45728039 None:intergenic 30.0%
TCAAACTTCATAATAGAGTC+AGG - chr2_1:45728053-45728072 Msa0209020:intron 30.0%
CATTCATGAGAAAGAAAAAG+GGG + chr2_1:45728317-45728336 None:intergenic 30.0%
CTCATTCATGAGAAAGAAAA+AGG + chr2_1:45728319-45728338 None:intergenic 30.0%
AAAATTCAAAAAGTGGAAGG+AGG - chr2_1:45728595-45728614 Msa0209020:intron 30.0%
! GTTGATTAGAAGTTTAAGAC+TGG - chr2_1:45728822-45728841 Msa0209020:CDS 30.0%
!!! ACTGTCGTTGATTTGGTTTT+CGG + chr2_1:45721929-45721948 None:intergenic 35.0%
! TCTTGTAACTGTCGTTGATT+TGG + chr2_1:45721936-45721955 None:intergenic 35.0%
GAAGAGAAGAACGATAAAGA+CGG - chr2_1:45722081-45722100 Msa0209020:three_prime_UTR 35.0%
TCATTACTCAGAATTCCAGA+AGG + chr2_1:45722156-45722175 None:intergenic 35.0%
!! AATGAGTCTTTTTCGTCTCT+AGG - chr2_1:45722171-45722190 Msa0209020:three_prime_UTR 35.0%
!! ATGAGTCTTTTTCGTCTCTA+GGG - chr2_1:45722172-45722191 Msa0209020:three_prime_UTR 35.0%
ATAATTTCTTAGAGCCCGTT+TGG - chr2_1:45722372-45722391 Msa0209020:intron 35.0%
! AATAAGGGCTTGTTTGCATT+AGG + chr2_1:45722589-45722608 None:intergenic 35.0%
!! TGCATTTTTAATTCCAGCTG+TGG - chr2_1:45723077-45723096 Msa0209020:CDS 35.0%
! ATCATTCACAAACTTTGGGA+AGG - chr2_1:45723341-45723360 Msa0209020:intron 35.0%
! TCATTCACAAACTTTGGGAA+GGG - chr2_1:45723342-45723361 Msa0209020:intron 35.0%
!! ATCCTTTTGTATTCTGAAGG+TGG + chr2_1:45723456-45723475 None:intergenic 35.0%
!! GGTTTTGTAGACAAATTACG+GGG - chr2_1:45723608-45723627 Msa0209020:CDS 35.0%
ATAAGTTATCAGTCCTCTCT+TGG - chr2_1:45723654-45723673 Msa0209020:intron 35.0%
ATTCAAACTGATACCAAGAG+AGG + chr2_1:45723670-45723689 None:intergenic 35.0%
CCTCACGTTAATTCCTATTA+TGG + chr2_1:45723833-45723852 None:intergenic 35.0%
CCATAATAGGAATTAACGTG+AGG - chr2_1:45723830-45723849 Msa0209020:intron 35.0%
TAATAGGAATTAACGTGAGG+TGG - chr2_1:45723833-45723852 Msa0209020:intron 35.0%
AAAGAAAAGACCCTTATCGA+GGG + chr2_1:45723938-45723957 None:intergenic 35.0%
AAAAGAAAAGACCCTTATCG+AGG + chr2_1:45723939-45723958 None:intergenic 35.0%
! ATTATAACTTCTGGTGTTGG+AGG - chr2_1:45724126-45724145 Msa0209020:intron 35.0%
GATATTGGAATCAAACTTCG+AGG - chr2_1:45724208-45724227 Msa0209020:intron 35.0%
!!! TCCAAAGGTATTGGAACTTT+TGG - chr2_1:45724259-45724278 Msa0209020:intron 35.0%
TCCAAAAGTTCCAATACCTT+TGG + chr2_1:45724263-45724282 None:intergenic 35.0%
AATAGTGCTTCTCTTCTAGT+AGG - chr2_1:45724764-45724783 Msa0209020:intron 35.0%
CTGGATATCTGTACTTGTAA+AGG - chr2_1:45724799-45724818 Msa0209020:intron 35.0%
GTAAAGGTCCCAAATATTTG+TGG - chr2_1:45724815-45724834 Msa0209020:intron 35.0%
GCATACAATCAGGAAAACTA+GGG + chr2_1:45724935-45724954 None:intergenic 35.0%
AGCATACAATCAGGAAAACT+AGG + chr2_1:45724936-45724955 None:intergenic 35.0%
GCTACATTTAGCATACAATC+AGG + chr2_1:45724945-45724964 None:intergenic 35.0%
! CTTACCTAATTTTATGAGCC+TGG - chr2_1:45724987-45725006 Msa0209020:intron 35.0%
TTAGCCAGGCTCATAAAATT+AGG + chr2_1:45724994-45725013 None:intergenic 35.0%
! ACAAACCTTCTTTGTTTGTG+TGG + chr2_1:45725066-45725085 None:intergenic 35.0%
! CACGACAATTTAGAATTGAG+TGG + chr2_1:45725155-45725174 None:intergenic 35.0%
TCCTGTTTAATTACAGGTTG+AGG - chr2_1:45725289-45725308 Msa0209020:CDS 35.0%
TCCTCAACCTGTAATTAAAC+AGG + chr2_1:45725293-45725312 None:intergenic 35.0%
ACATCTACATCAACATAGAC+AGG + chr2_1:45725344-45725363 None:intergenic 35.0%
GTCTATGTTGATGTAGATGT+TGG - chr2_1:45725344-45725363 Msa0209020:CDS 35.0%
TCAAAGGATGTGATAGAAGT+AGG + chr2_1:45725390-45725409 None:intergenic 35.0%
ATACAGAACAACAAAACGCT+TGG + chr2_1:45725511-45725530 None:intergenic 35.0%
TGAACTTAAGAAGATCAGCA+TGG + chr2_1:45725602-45725621 None:intergenic 35.0%
GCTGATCTTCTTAAGTTCAT+TGG - chr2_1:45725603-45725622 Msa0209020:intron 35.0%
!! ACCTTCCTTTTTAAAGAGTG+TGG - chr2_1:45725875-45725894 Msa0209020:intron 35.0%
! ACCACACTCTTTAAAAAGGA+AGG + chr2_1:45725879-45725898 None:intergenic 35.0%
!! CTTTTTAAAGAGTGTGGTGT+GGG - chr2_1:45725881-45725900 Msa0209020:intron 35.0%
!! TTTTTAAAGAGTGTGGTGTG+GGG - chr2_1:45725882-45725901 Msa0209020:intron 35.0%
ATGAAGATACTGAAAGAAGG+GGG - chr2_1:45725921-45725940 Msa0209020:intron 35.0%
AAATCCGGTGGTAAATGTTA+GGG - chr2_1:45726000-45726019 Msa0209020:intron 35.0%
! AAAGGCTTGGATCTGAAATT+TGG - chr2_1:45726081-45726100 Msa0209020:intron 35.0%
GACATTCGAATAAAACAGTC+AGG + chr2_1:45726367-45726386 None:intergenic 35.0%
AAAATAAAAAACCCCGAGTG+TGG - chr2_1:45726396-45726415 Msa0209020:intron 35.0%
TAAGAGAGATTCACAAATGG+CGG + chr2_1:45726479-45726498 None:intergenic 35.0%
GAGTAAGAGAGATTCACAAA+TGG + chr2_1:45726482-45726501 None:intergenic 35.0%
ATAGGCAAAAAACAGAGAAG+GGG + chr2_1:45726504-45726523 None:intergenic 35.0%
!!! AACTACGGTTTTTTGCTGAA+GGG - chr2_1:45726591-45726610 Msa0209020:intron 35.0%
! AAATAAAACTGAGTTGGGTC+AGG + chr2_1:45726633-45726652 None:intergenic 35.0%
AAACTCTATGTTTGTGAGGA+TGG - chr2_1:45726664-45726683 Msa0209020:CDS 35.0%
AACTCTATGTTTGTGAGGAT+GGG - chr2_1:45726665-45726684 Msa0209020:CDS 35.0%
AACAACTAGGAATATGGGAT+GGG + chr2_1:45726915-45726934 None:intergenic 35.0%
TAACAACTAGGAATATGGGA+TGG + chr2_1:45726916-45726935 None:intergenic 35.0%
! TTTCTCCTTTTCTGCTTTGT+AGG - chr2_1:45727054-45727073 Msa0209020:intron 35.0%
TATGTTATTCTATGGCTTCC+AGG - chr2_1:45727189-45727208 Msa0209020:intron 35.0%
CAGGAATATATCCATAGAGT+GGG - chr2_1:45727208-45727227 Msa0209020:intron 35.0%
ATTGCAATTCTTCAGGAATC+AGG + chr2_1:45727279-45727298 None:intergenic 35.0%
CGAAGAAATTGCAATTCTTC+AGG + chr2_1:45727286-45727305 None:intergenic 35.0%
GTTGCAATATAGGTTTCTTG+AGG - chr2_1:45727385-45727404 Msa0209020:CDS 35.0%
!!! AGGCAGTATTTTTTATCCCT+TGG - chr2_1:45727446-45727465 Msa0209020:CDS 35.0%
TCAAATGCATACTCTTTCAC+AGG + chr2_1:45727589-45727608 None:intergenic 35.0%
TTCAAATGTACAGTCTCAAC+TGG - chr2_1:45727621-45727640 Msa0209020:intron 35.0%
!! TTTTAATTGGCACTTGAGGA+AGG + chr2_1:45727656-45727675 None:intergenic 35.0%
TGTGTAAGATAAGCTGCAAT+TGG + chr2_1:45727696-45727715 None:intergenic 35.0%
AGTGTTCAAATGATAAACGC+TGG + chr2_1:45727752-45727771 None:intergenic 35.0%
CGTTTATCATTTGAACACTC+TGG - chr2_1:45727753-45727772 Msa0209020:CDS 35.0%
ATATGACCTATAAGCCTCTT+TGG + chr2_1:45727779-45727798 None:intergenic 35.0%
CATGGATATTCATACAGTTC+AGG + chr2_1:45727908-45727927 None:intergenic 35.0%
ATCTGTCTGTTTGAAAGACA+TGG + chr2_1:45727926-45727945 None:intergenic 35.0%
TTTGTACACAACTTCAGACA+AGG + chr2_1:45727965-45727984 None:intergenic 35.0%
TCGAGTAAGAAAGACATGAA+TGG + chr2_1:45728344-45728363 None:intergenic 35.0%
AATTATGCATGGTAGCACTT+AGG + chr2_1:45728405-45728424 None:intergenic 35.0%
TGGGTTTGTAAAACAGAATG+AGG + chr2_1:45728527-45728546 None:intergenic 35.0%
TCTATGTTCAGGCTTATCTT+CGG + chr2_1:45728550-45728569 None:intergenic 35.0%
ATCTAACGAATTGGAAATGC+AGG + chr2_1:45728907-45728926 None:intergenic 35.0%
TGCTATCAGAAAGAGATGTA+TGG + chr2_1:45729002-45729021 None:intergenic 35.0%
ACCAATTCCAAAACCAACCA+TGG - chr2_1:45721873-45721892 Msa0209020:three_prime_UTR 40.0%
!!! CTGTCGTTGATTTGGTTTTC+GGG + chr2_1:45721928-45721947 None:intergenic 40.0%
! GTTGAGAATGTTTTGCCTTC+TGG - chr2_1:45722138-45722157 Msa0209020:three_prime_UTR 40.0%
GTTATCTCAACGTACTTCTC+AGG - chr2_1:45722194-45722213 Msa0209020:three_prime_UTR 40.0%
! GAGTTTTACCCATATGACTC+AGG - chr2_1:45722230-45722249 Msa0209020:exon 40.0%
ACATCCTTTCCCATCAATAG+TGG + chr2_1:45723021-45723040 None:intergenic 40.0%
TTGATGGGAAAGGATGTTCT+TGG - chr2_1:45723024-45723043 Msa0209020:CDS 40.0%
TTGTACAACAATTCCACAGC+TGG + chr2_1:45723093-45723112 None:intergenic 40.0%
ATTACACCAGTTCCATTACG+AGG + chr2_1:45723129-45723148 None:intergenic 40.0%
AGCATGTGTGTATACCTGAA+TGG + chr2_1:45723178-45723197 None:intergenic 40.0%
AGTCGCGGAATAAGTCAATA+AGG + chr2_1:45723276-45723295 None:intergenic 40.0%
!! TATTGACTTATTCCGCGACT+TGG - chr2_1:45723276-45723295 Msa0209020:CDS 40.0%
! CAAACTTTGGGAAGGGTTAT+TGG - chr2_1:45723349-45723368 Msa0209020:intron 40.0%
GACCACCTTCAGAATACAAA+AGG - chr2_1:45723451-45723470 Msa0209020:intron 40.0%
!!! GTGGTTTTAGAGCAAGTGAT+GGG - chr2_1:45723852-45723871 Msa0209020:intron 40.0%
!!! TGGTTTTAGAGCAAGTGATG+GGG - chr2_1:45723853-45723872 Msa0209020:intron 40.0%
AAGTGATTCTCTGGTTGTCA+GGG - chr2_1:45724067-45724086 Msa0209020:intron 40.0%
AATCTGAGCTCTTGCATGAT+TGG - chr2_1:45724155-45724174 Msa0209020:intron 40.0%
TCATGATTGATGAAGCAGAC+AGG - chr2_1:45724186-45724205 Msa0209020:intron 40.0%
TGATGAAGCAGACAGGATAT+TGG - chr2_1:45724193-45724212 Msa0209020:intron 40.0%
ATTGGAATCAAACTTCGAGG+AGG - chr2_1:45724211-45724230 Msa0209020:intron 40.0%
!! TGAAGTATTTTTCATGGGGC+TGG + chr2_1:45724303-45724322 None:intergenic 40.0%
ATCAACAGTGCAAAAGACAC+TGG + chr2_1:45724406-45724425 None:intergenic 40.0%
!! CATTTAAAGGTTTGGTGCCA+AGG - chr2_1:45724851-45724870 Msa0209020:intron 40.0%
TGAGAAGCAGATAATTAGCC+AGG + chr2_1:45725008-45725027 None:intergenic 40.0%
TTCAGCCACACAAACAAAGA+AGG - chr2_1:45725058-45725077 Msa0209020:intron 40.0%
!! CAAGGATTTGCTTTAAGGGA+AGG + chr2_1:45725115-45725134 None:intergenic 40.0%
TCTACATCAACATAGACAGG+AGG + chr2_1:45725341-45725360 None:intergenic 40.0%
TGTAGATGTTGGGAGAGAAA+AGG - chr2_1:45725355-45725374 Msa0209020:CDS 40.0%
AGGATGTGATAGAAGTAGGT+AGG + chr2_1:45725386-45725405 None:intergenic 40.0%
ACTGTTGAAGGATTGGAACA+GGG - chr2_1:45725465-45725484 Msa0209020:intron 40.0%
! CCACACCACACTCTTTAAAA+AGG + chr2_1:45725883-45725902 None:intergenic 40.0%
!! CCTTTTTAAAGAGTGTGGTG+TGG - chr2_1:45725880-45725899 Msa0209020:intron 40.0%
!! TTTTAAAGAGTGTGGTGTGG+GGG - chr2_1:45725883-45725902 Msa0209020:intron 40.0%
TACTCTATAGCATTGTTGCC+TGG - chr2_1:45725961-45725980 Msa0209020:intron 40.0%
ACTCTATAGCATTGTTGCCT+GGG - chr2_1:45725962-45725981 Msa0209020:intron 40.0%
TTCATATCCAACAGTAACCC+AGG + chr2_1:45725982-45726001 None:intergenic 40.0%
GAAATCCGGTGGTAAATGTT+AGG - chr2_1:45725999-45726018 Msa0209020:intron 40.0%
ACTAGATACCCCAATCAGTT+TGG + chr2_1:45726028-45726047 None:intergenic 40.0%
! GTTGCAACTTTCACTAGTCT+TGG - chr2_1:45726142-45726161 Msa0209020:intron 40.0%
TCTTGGATCAATCAGAACTC+TGG - chr2_1:45726159-45726178 Msa0209020:intron 40.0%
GATTCTGGTACGTCATAACA+CGG + chr2_1:45726259-45726278 None:intergenic 40.0%
CAAAAAACCGTAGTTGTGCT+GGG + chr2_1:45726586-45726605 None:intergenic 40.0%
!!! CAACTACGGTTTTTTGCTGA+AGG - chr2_1:45726590-45726609 Msa0209020:intron 40.0%
!!! ACTACGGTTTTTTGCTGAAG+GGG - chr2_1:45726592-45726611 Msa0209020:intron 40.0%
TGAAGGGGAAAAGAAAGCTT+GGG - chr2_1:45726607-45726626 Msa0209020:intron 40.0%
ACTCTATGTTTGTGAGGATG+GGG - chr2_1:45726666-45726685 Msa0209020:CDS 40.0%
CCACTCTATGGATATATTCC+TGG + chr2_1:45727210-45727229 None:intergenic 40.0%
CCAGGAATATATCCATAGAG+TGG - chr2_1:45727207-45727226 Msa0209020:intron 40.0%
GCAATTTCTTCGCTACTTGA+AGG - chr2_1:45727294-45727313 Msa0209020:intron 40.0%
GCTTATATTGTAAAGGGGGA+AGG - chr2_1:45727426-45727445 Msa0209020:CDS 40.0%
TGGTTAATTTCAGGCAGCAA+AGG - chr2_1:45727561-45727580 Msa0209020:intron 40.0%
! CAGTATCATCTGGATTTTGC+AGG - chr2_1:45727714-45727733 Msa0209020:CDS 40.0%
GTTGTACCTGTAAATCAAGG+CGG + chr2_1:45727849-45727868 None:intergenic 40.0%
!! GCCGTTGATTTATTTCAGGT+TGG + chr2_1:45727998-45728017 None:intergenic 40.0%
!! AGAGGCCGTTGATTTATTTC+AGG + chr2_1:45728002-45728021 None:intergenic 40.0%
GAAATAAATCAACGGCCTCT+TGG - chr2_1:45728002-45728021 Msa0209020:intron 40.0%
AGGCTTGAGAGAATTATGCA+TGG + chr2_1:45728416-45728435 None:intergenic 40.0%
TCTCTCAAGCCTCTTTATTC+TGG - chr2_1:45728424-45728443 Msa0209020:intron 40.0%
TTCCACAAGCCAGAATAAAG+AGG + chr2_1:45728436-45728455 None:intergenic 40.0%
!! ACTTATGAAGCATCGTTTGC+AGG - chr2_1:45728680-45728699 Msa0209020:CDS 40.0%
TGAGAAACAGTGTCTAGCTG+CGG + chr2_1:45721819-45721838 None:intergenic 45.0%
!!! GCCATGGTTGGTTTTGGAAT+TGG + chr2_1:45721877-45721896 None:intergenic 45.0%
TGAGATGTGGTTGTCGTTGT+CGG + chr2_1:45721905-45721924 None:intergenic 45.0%
!!! TTTGGTTTTCGGGTGAGATG+TGG + chr2_1:45721918-45721937 None:intergenic 45.0%
TCTTAGAGCCCGTTTGGATT+AGG - chr2_1:45722378-45722397 Msa0209020:intron 45.0%
TCCTTTCCCATCAATAGTGG+CGG + chr2_1:45723018-45723037 None:intergenic 45.0%
GTGCAATTCACACCTCGTAA+TGG - chr2_1:45723114-45723133 Msa0209020:CDS 45.0%
! TTCACACCTCGTAATGGAAC+TGG - chr2_1:45723120-45723139 Msa0209020:intron 45.0%
TGAATGGCAAGCTCTCTAGT+TGG + chr2_1:45723162-45723181 None:intergenic 45.0%
AACTAGAGAGCTTGCCATTC+AGG - chr2_1:45723161-45723180 Msa0209020:intron 45.0%
GTGTCTGAAAAACCAAGTCG+CGG + chr2_1:45723291-45723310 None:intergenic 45.0%
! ACTTTGGGAAGGGTTATTGG+TGG - chr2_1:45723352-45723371 Msa0209020:intron 45.0%
!! TATTGGTGGTGTGGGTAGAA+AGG - chr2_1:45723366-45723385 Msa0209020:intron 45.0%
!! ATTGGTGGTGTGGGTAGAAA+GGG - chr2_1:45723367-45723386 Msa0209020:intron 45.0%
GAAGCTGAGCGCATTGTTAA+AGG - chr2_1:45723391-45723410 Msa0209020:intron 45.0%
! AATCTGTTGATTGCAACGCC+TGG - chr2_1:45723418-45723437 Msa0209020:intron 45.0%
GTCACTTGAACTGTCAGTGT+CGG + chr2_1:45723543-45723562 None:intergenic 45.0%
!!! GGTGGTTTTAGAGCAAGTGA+TGG - chr2_1:45723851-45723870 Msa0209020:intron 45.0%
!!! GGTTTTAGAGCAAGTGATGG+GGG - chr2_1:45723854-45723873 Msa0209020:intron 45.0%
! AGAAGCTGTTTCCCTCGATA+AGG - chr2_1:45723924-45723943 Msa0209020:intron 45.0%
! GAAGCTGTTTCCCTCGATAA+GGG - chr2_1:45723925-45723944 Msa0209020:intron 45.0%
GGAACAGAGAAGTGATTCTC+TGG - chr2_1:45724058-45724077 Msa0209020:intron 45.0%
GAAGTGATTCTCTGGTTGTC+AGG - chr2_1:45724066-45724085 Msa0209020:intron 45.0%
GTGCTTCTCTTCTAGTAGGT+AGG - chr2_1:45724768-45724787 Msa0209020:intron 45.0%
!!! GGTTTGGTGCCAAGGTTTTT+AGG - chr2_1:45724859-45724878 Msa0209020:intron 45.0%
CAAGTTAGCAACATCGTCTC+AGG + chr2_1:45724891-45724910 None:intergenic 45.0%
AGGTGTCTGAAAAGACAAGC+GGG + chr2_1:45725321-45725340 None:intergenic 45.0%
! GAGGTGTCTGAAAAGACAAG+CGG + chr2_1:45725322-45725341 None:intergenic 45.0%
CACTGTTGAAGGATTGGAAC+AGG - chr2_1:45725464-45725483 Msa0209020:intron 45.0%
ACAACAAAACGCTTGGCACA+GGG + chr2_1:45725504-45725523 None:intergenic 45.0%
AACAACAAAACGCTTGGCAC+AGG + chr2_1:45725505-45725524 None:intergenic 45.0%
ATTGTTGCCTGGGTTACTGT+TGG - chr2_1:45725972-45725991 Msa0209020:intron 45.0%
CTGTTGGATATGAAATCCGG+TGG - chr2_1:45725988-45726007 Msa0209020:intron 45.0%
! TGTTAGGGTGCCAAACTGAT+TGG - chr2_1:45726015-45726034 Msa0209020:intron 45.0%
! GTTAGGGTGCCAAACTGATT+GGG - chr2_1:45726016-45726035 Msa0209020:intron 45.0%
! TTAGGGTGCCAAACTGATTG+GGG - chr2_1:45726017-45726036 Msa0209020:intron 45.0%
TACGTCATAACACGGACCAA+GGG + chr2_1:45726251-45726270 None:intergenic 45.0%
ACTCACGATTTCACCCACAA+CGG + chr2_1:45726293-45726312 None:intergenic 45.0%
AAAAAACCCCGAGTGTGGAA+AGG - chr2_1:45726401-45726420 Msa0209020:intron 45.0%
CCTCAACTGAACTCTCCTAA+AGG + chr2_1:45726546-45726565 None:intergenic 45.0%
! CCTTTAGGAGAGTTCAGTTG+AGG - chr2_1:45726543-45726562 Msa0209020:intron 45.0%
TTAGGAGAGTTCAGTTGAGG+TGG - chr2_1:45726546-45726565 Msa0209020:intron 45.0%
GCAAAAAACCGTAGTTGTGC+TGG + chr2_1:45726587-45726606 None:intergenic 45.0%
CTGAAGGGGAAAAGAAAGCT+TGG - chr2_1:45726606-45726625 Msa0209020:intron 45.0%
CTCTATGTTTGTGAGGATGG+GGG - chr2_1:45726667-45726686 Msa0209020:CDS 45.0%
GATGGGGGAATAGAGTTGTA+TGG - chr2_1:45726682-45726701 Msa0209020:intron 45.0%
CCAGTCCTACAAAGCAGAAA+AGG + chr2_1:45727062-45727081 None:intergenic 45.0%
! CCTTTTCTGCTTTGTAGGAC+TGG - chr2_1:45727059-45727078 Msa0209020:intron 45.0%
TGATCCACCTGATGAACCAA+AGG - chr2_1:45727093-45727112 Msa0209020:intron 45.0%
!! AGAAGCACCTTTGGTTCATC+AGG + chr2_1:45727103-45727122 None:intergenic 45.0%
TAATTGGCACTTGAGGAAGG+AGG + chr2_1:45727653-45727672 None:intergenic 45.0%
! CTGGATTTTGCAGGAGAAGA+TGG - chr2_1:45727723-45727742 Msa0209020:CDS 45.0%
! GATTTTGCAGGAGAAGATGG+TGG - chr2_1:45727726-45727745 Msa0209020:CDS 45.0%
TTTGAACACTCTGGCCAAAG+AGG - chr2_1:45727762-45727781 Msa0209020:CDS 45.0%
TGTTCACCGCCTTGATTTAC+AGG - chr2_1:45727840-45727859 Msa0209020:CDS 45.0%
AAAGGGGAGAAGAGTAGAGT+GGG + chr2_1:45728301-45728320 None:intergenic 45.0%
AAAAGGGGAGAAGAGTAGAG+TGG + chr2_1:45728302-45728321 None:intergenic 45.0%
TGCATGGTAGCACTTAGGAA+AGG + chr2_1:45728400-45728419 None:intergenic 45.0%
!! AGCCTCTTTATTCTGGCTTG+TGG - chr2_1:45728431-45728450 Msa0209020:intron 45.0%
TGTTCAGGCTTATCTTCGGT+GGG + chr2_1:45728546-45728565 None:intergenic 45.0%
ATGTTCAGGCTTATCTTCGG+TGG + chr2_1:45728547-45728566 None:intergenic 45.0%
! AAGCACTGCTGTCTATGTTC+AGG + chr2_1:45728561-45728580 None:intergenic 45.0%
GGAGGAAGAAGACATTGATC+AGG - chr2_1:45728613-45728632 Msa0209020:intron 45.0%
AGCATCGTTTGCAGGAGATA+TGG - chr2_1:45728688-45728707 Msa0209020:CDS 45.0%
GGATTCCTGCCAAAACTTTG+GGG + chr2_1:45728756-45728775 None:intergenic 45.0%
GGGATTCCTGCCAAAACTTT+GGG + chr2_1:45728757-45728776 None:intergenic 45.0%
TGGGATTCCTGCCAAAACTT+TGG + chr2_1:45728758-45728777 None:intergenic 45.0%
! TAGTTGCTGTTGTAGTTCGC+TGG - chr2_1:45729038-45729057 Msa0209020:five_prime_UTR 45.0%
!! AATTGAAAATATTATTATAT+TGG - chr2_1:45727491-45727510 Msa0209020:CDS 5.0%
AGAAACAGTGTCTAGCTGCG+GGG + chr2_1:45721817-45721836 None:intergenic 50.0%
GAGAAACAGTGTCTAGCTGC+GGG + chr2_1:45721818-45721837 None:intergenic 50.0%
! TGAAGCTGCTGGTTGTTCTG+TGG + chr2_1:45721846-45721865 None:intergenic 50.0%
TGGTGAAGCAATGAAGCTGC+TGG + chr2_1:45721857-45721876 None:intergenic 50.0%
!!! GATTCGGCCATGGTTGGTTT+TGG + chr2_1:45721883-45721902 None:intergenic 50.0%
GTGGTTGTCGTTGTCGGATT+CGG + chr2_1:45721899-45721918 None:intergenic 50.0%
AGCGATTCCGCCACTATTGA+TGG - chr2_1:45723008-45723027 Msa0209020:intron 50.0%
GCGATTCCGCCACTATTGAT+GGG - chr2_1:45723009-45723028 Msa0209020:intron 50.0%
TCCGCCACTATTGATGGGAA+AGG - chr2_1:45723014-45723033 Msa0209020:CDS 50.0%
!! GGTTTTTCAGACACACGCTG+TGG - chr2_1:45723297-45723316 Msa0209020:intron 50.0%
GTGGCGAGTGAGCTAATGAA+AGG - chr2_1:45723316-45723335 Msa0209020:intron 50.0%
!! GGAAGGGTTATTGGTGGTGT+GGG - chr2_1:45723358-45723377 Msa0209020:intron 50.0%
! AGAGCAAGTGATGGGGGATA+TGG - chr2_1:45723860-45723879 Msa0209020:intron 50.0%
! GAGCAAGTGATGGGGGATAT+GGG - chr2_1:45723861-45723880 Msa0209020:intron 50.0%
!! TGGTGCCAAGGTTTTTAGGC+TGG - chr2_1:45724863-45724882 Msa0209020:intron 50.0%
!! GGTGCCAAGGTTTTTAGGCT+GGG - chr2_1:45724864-45724883 Msa0209020:intron 50.0%
AGGTCCCAGCCTAAAAACCT+TGG + chr2_1:45724871-45724890 None:intergenic 50.0%
! AATACGTTCCGCATCGATGC+AGG - chr2_1:45725440-45725459 Msa0209020:intron 50.0%
! AACAGTGACCTGCATCGATG+CGG + chr2_1:45725451-45725470 None:intergenic 50.0%
TCGATGCAGGTCACTGTTGA+AGG - chr2_1:45725453-45725472 Msa0209020:intron 50.0%
GCAGGTCACTGTTGAAGGAT+TGG - chr2_1:45725458-45725477 Msa0209020:intron 50.0%
! TGTACTGATGTTGCTGCTCG+TGG - chr2_1:45725720-45725739 Msa0209020:intron 50.0%
TGGACTTGACATACCTGCTG+TGG - chr2_1:45725740-45725759 Msa0209020:intron 50.0%
GGCACCCTAACATTTACCAC+CGG + chr2_1:45726007-45726026 None:intergenic 50.0%
GTACGTCATAACACGGACCA+AGG + chr2_1:45726252-45726271 None:intergenic 50.0%
TGGGTGAAATCGTGAGTTGC+CGG - chr2_1:45726296-45726315 Msa0209020:intron 50.0%
TGAAATCGTGAGTTGCCGGT+GGG - chr2_1:45726300-45726319 Msa0209020:intron 50.0%
!! TGGGTGGAAAGGTGTCGAAA+TGG - chr2_1:45726329-45726348 Msa0209020:intron 50.0%
TCACAAATGGCGGTGCAAAG+AGG + chr2_1:45726469-45726488 None:intergenic 50.0%
! AGCACCTTTGGTTCATCAGG+TGG + chr2_1:45727100-45727119 None:intergenic 50.0%
GAGCTGTTCTACCCACTCTA+TGG + chr2_1:45727222-45727241 None:intergenic 50.0%
CTCTGGCCAAAGAGGCTTAT+AGG - chr2_1:45727770-45727789 Msa0209020:CDS 50.0%
AGAGTGGGATGGGTAACAGA+GGG + chr2_1:45728286-45728305 None:intergenic 50.0%
TAGAGTGGGATGGGTAACAG+AGG + chr2_1:45728287-45728306 None:intergenic 50.0%
GGAGAAGAGTAGAGTGGGAT+GGG + chr2_1:45728296-45728315 None:intergenic 50.0%
ACAGCAGTGCTTCGAAGCAT+AGG - chr2_1:45728569-45728588 Msa0209020:intron 50.0%
!! TCCTGCCAAAACTTTGGGGT+GGG + chr2_1:45728752-45728771 None:intergenic 50.0%
! TTCCTGCCAAAACTTTGGGG+TGG + chr2_1:45728753-45728772 None:intergenic 50.0%
! TTGCTGTTGTAGTTCGCTGG+TGG - chr2_1:45729041-45729060 Msa0209020:five_prime_UTR 50.0%
TTGTCGGATTCGGCCATGGT+TGG + chr2_1:45721889-45721908 None:intergenic 55.0%
!! AGGATGTTCTTGGTGCTGCG+AGG - chr2_1:45723034-45723053 Msa0209020:CDS 55.0%
!! TGTTCTTGGTGCTGCGAGGA+CGG - chr2_1:45723038-45723057 Msa0209020:CDS 55.0%
!! GGGAAGGGTTATTGGTGGTG+TGG - chr2_1:45723357-45723376 Msa0209020:intron 55.0%
AGGTGGTCAAGAAGACGACC+AGG + chr2_1:45723439-45723458 None:intergenic 55.0%
! CAAGTGATGGGGGATATGGG+AGG - chr2_1:45723864-45723883 Msa0209020:intron 55.0%
GATTGTGTGAGCTGCGTCGT+AGG - chr2_1:45726198-45726217 Msa0209020:intron 55.0%
TGCAATCCCTATGCCTCCCA+AGG - chr2_1:45726225-45726244 Msa0209020:intron 55.0%
TAACACGGACCAAGGGCCTT+GGG + chr2_1:45726244-45726263 None:intergenic 55.0%
ATAACACGGACCAAGGGCCT+TGG + chr2_1:45726245-45726264 None:intergenic 55.0%
ACGGCACACTTCAGCGATTC+TGG + chr2_1:45726274-45726293 None:intergenic 55.0%
! ATCGCTGAAGTGTGCCGTTG+TGG - chr2_1:45726276-45726295 Msa0209020:intron 55.0%
! TCGCTGAAGTGTGCCGTTGT+GGG - chr2_1:45726277-45726296 Msa0209020:intron 55.0%
GTGAAATCGTGAGTTGCCGG+TGG - chr2_1:45726299-45726318 Msa0209020:intron 55.0%
AGTTGCCGGTGGGAATGTGT+GGG - chr2_1:45726310-45726329 Msa0209020:intron 55.0%
TTCCACCCACACATTCCCAC+CGG + chr2_1:45726318-45726337 None:intergenic 55.0%
GTGGGAATGTGTGGGTGGAA+AGG - chr2_1:45726318-45726337 Msa0209020:intron 55.0%
CGTAGTTGTGCTGGGTGAGA+GGG + chr2_1:45726578-45726597 None:intergenic 55.0%
CCTCTCACCCAGCACAACTA+CGG - chr2_1:45726576-45726595 Msa0209020:intron 55.0%
AGAGTGGGTAGAACAGCTCG+TGG - chr2_1:45727223-45727242 Msa0209020:intron 55.0%
GAGTGGGTAGAACAGCTCGT+GGG - chr2_1:45727224-45727243 Msa0209020:intron 55.0%
AGTGGGTAGAACAGCTCGTG+GGG - chr2_1:45727225-45727244 Msa0209020:intron 55.0%
GGGAGAAGAGTAGAGTGGGA+TGG + chr2_1:45728297-45728316 None:intergenic 55.0%
!! CTGCCAAAACTTTGGGGTGG+GGG + chr2_1:45728750-45728769 None:intergenic 55.0%
!! CCTGCCAAAACTTTGGGGTG+GGG + chr2_1:45728751-45728770 None:intergenic 55.0%
GTCGTTGTCGGATTCGGCCA+TGG + chr2_1:45721893-45721912 None:intergenic 60.0%
!! GTTCTTGGTGCTGCGAGGAC+GGG - chr2_1:45723039-45723058 Msa0209020:CDS 60.0%
! CAAGGGCCTTGGGAGGCATA+GGG + chr2_1:45726234-45726253 None:intergenic 60.0%
GAGTTGCCGGTGGGAATGTG+TGG - chr2_1:45726309-45726328 Msa0209020:intron 60.0%
CAAGGAGGAGTTGTGGTCGC+AGG + chr2_1:45726435-45726454 None:intergenic 60.0%
AAAGAGGAGCTGCGAGCGCA+AGG + chr2_1:45726453-45726472 None:intergenic 60.0%
TGTGCTGGGTGAGAGGGATG+CGG + chr2_1:45726572-45726591 None:intergenic 60.0%
CCGTAGTTGTGCTGGGTGAG+AGG + chr2_1:45726579-45726598 None:intergenic 60.0%
GGTAGAACAGCTCGTGGGGA+AGG - chr2_1:45727229-45727248 Msa0209020:intron 60.0%
AGAACAGCTCGTGGGGAAGG+TGG - chr2_1:45727232-45727251 Msa0209020:intron 60.0%
GCTCGTGGGGAAGGTGGAAA+AGG - chr2_1:45727238-45727257 Msa0209020:intron 60.0%
! ACGCCCCCACCCCAAAGTTT+TGG - chr2_1:45728744-45728763 Msa0209020:CDS 60.0%
!! CCCCACCCCAAAGTTTTGGC+AGG - chr2_1:45728748-45728767 Msa0209020:CDS 60.0%
! CCAAGGGCCTTGGGAGGCAT+AGG + chr2_1:45726235-45726254 None:intergenic 65.0%
CCTATGCCTCCCAAGGCCCT+TGG - chr2_1:45726232-45726251 Msa0209020:intron 65.0%
TGCCGGTGGGAATGTGTGGG+TGG - chr2_1:45726313-45726332 Msa0209020:intron 65.0%
GTGGCGCCTTTCCACACTCG+GGG + chr2_1:45726410-45726429 None:intergenic 65.0%
GGTGGCGCCTTTCCACACTC+GGG + chr2_1:45726411-45726430 None:intergenic 65.0%
CGGTGGCGCCTTTCCACACT+CGG + chr2_1:45726412-45726431 None:intergenic 65.0%
GGAGGAGTTGTGGTCGCAGG+CGG + chr2_1:45726432-45726451 None:intergenic 65.0%
GCGAGCGCAAGGAGGAGTTG+TGG + chr2_1:45726442-45726461 None:intergenic 65.0%
!! ACTTTGGGGTGGGGGCGTGT+GGG + chr2_1:45728742-45728761 None:intergenic 65.0%
!! AACTTTGGGGTGGGGGCGTG+TGG + chr2_1:45728743-45728762 None:intergenic 65.0%
! GGTGCTGCGAGGACGGGTTC+TGG - chr2_1:45723045-45723064 Msa0209020:CDS 70.0%
CACGGACCAAGGGCCTTGGG+AGG + chr2_1:45726241-45726260 None:intergenic 70.0%
GGAGTTGTGGTCGCAGGCGG+TGG + chr2_1:45726429-45726448 None:intergenic 70.0%
GAGGAGCTGCGAGCGCAAGG+AGG + chr2_1:45726450-45726469 None:intergenic 70.0%
GGGCGTGTGGGGGTTGTAGC+TGG + chr2_1:45728730-45728749 None:intergenic 70.0%
! TTTGGGGTGGGGGCGTGTGG+GGG + chr2_1:45728740-45728759 None:intergenic 70.0%
!! CTTTGGGGTGGGGGCGTGTG+GGG + chr2_1:45728741-45728760 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 45721790 45729083 45721790 ID=Msa0209020;Name=Msa0209020
chr2_1 mRNA 45721790 45729083 45721790 ID=Msa0209020-mRNA-1;Parent=Msa0209020;Name=Msa0209020-mRNA-1;_AED=0.13;_eAED=0.13;_QI=102|0.76|0.85|0.85|1|1|14|453|607
chr2_1 exon 45721790 45722359 45721790 ID=Msa0209020-mRNA-1:exon:13178;Parent=Msa0209020-mRNA-1
chr2_1 exon 45723012 45723137 45723012 ID=Msa0209020-mRNA-1:exon:13177;Parent=Msa0209020-mRNA-1
chr2_1 exon 45723231 45723299 45723231 ID=Msa0209020-mRNA-1:exon:13176;Parent=Msa0209020-mRNA-1
chr2_1 exon 45723558 45723662 45723558 ID=Msa0209020-mRNA-1:exon:13175;Parent=Msa0209020-mRNA-1
chr2_1 exon 45723759 45723797 45723759 ID=Msa0209020-mRNA-1:exon:13174;Parent=Msa0209020-mRNA-1
chr2_1 exon 45724276 45724323 45724276 ID=Msa0209020-mRNA-1:exon:13173;Parent=Msa0209020-mRNA-1
chr2_1 exon 45724567 45724653 45724567 ID=Msa0209020-mRNA-1:exon:13172;Parent=Msa0209020-mRNA-1
chr2_1 exon 45725112 45725411 45725112 ID=Msa0209020-mRNA-1:exon:13171;Parent=Msa0209020-mRNA-1
chr2_1 exon 45725497 45725568 45725497 ID=Msa0209020-mRNA-1:exon:13170;Parent=Msa0209020-mRNA-1
chr2_1 exon 45725794 45725835 45725794 ID=Msa0209020-mRNA-1:exon:13169;Parent=Msa0209020-mRNA-1
chr2_1 exon 45726608 45726691 45726608 ID=Msa0209020-mRNA-1:exon:13168;Parent=Msa0209020-mRNA-1
chr2_1 exon 45727378 45727566 45727378 ID=Msa0209020-mRNA-1:exon:13167;Parent=Msa0209020-mRNA-1
chr2_1 exon 45727691 45727876 45727691 ID=Msa0209020-mRNA-1:exon:13166;Parent=Msa0209020-mRNA-1
chr2_1 exon 45728622 45729083 45728622 ID=Msa0209020-mRNA-1:exon:13165;Parent=Msa0209020-mRNA-1
chr2_1 five_prime_UTR 45728982 45729083 45728982 ID=Msa0209020-mRNA-1:five_prime_utr;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45728622 45728981 45728622 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45727691 45727876 45727691 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45727378 45727566 45727378 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45726608 45726691 45726608 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45725794 45725835 45725794 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45725497 45725568 45725497 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45725112 45725411 45725112 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45724567 45724653 45724567 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45724276 45724323 45724276 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45723759 45723797 45723759 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45723558 45723662 45723558 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45723231 45723299 45723231 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45723012 45723137 45723012 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 CDS 45722243 45722359 45722243 ID=Msa0209020-mRNA-1:cds;Parent=Msa0209020-mRNA-1
chr2_1 three_prime_UTR 45721790 45722242 45721790 ID=Msa0209020-mRNA-1:three_prime_utr;Parent=Msa0209020-mRNA-1
Gene Sequence

>Msa0209020

ATGGCCGAATCCGACAACGACAACCACATCTCACCCGAAAACCAAATCAACGACAGTTACAAGAAGAAGAATAAGAAGCTTCGCAACAGAAAAAGATCTCGTAAATTGGAAAAAGAACTTGAAAAACAACAACAACAACTAGAGGAGAAGAATAATGAAAACACAGAATCTGAAGCTGAAGAAGATGAAGAAGAGAAGAACGATAAAGACGGCGACGACGACATCGAAGAAATAGAAGAGAAGAAAGTTGAGAATGTTTTGCCTTCTGGAATTCTGAGTAATGAGTCTTTTTCGTCTCTAGGGTTATCTCAACGTACTTCTCAGGCTATTGCTGCAATGAGTTTTACCCATATGACTCAGATTCAAGCGAAAGCGATTCCGCCACTATTGATGGGAAAGGATGTTCTTGGTGCTGCGAGGACGGGTTCTGGTAAAACACTTGCATTTTTAATTCCAGCTGTGGAATTGTTGTACAATGTGCAATTCACACCTCGTAATGGAACTGGTGTAATTGTCATTTGTCCAACTAGAGAGCTTGCCATTCAGACACACGCTGTGGCGAGTGAGCTAATGAAAGGTTATCATTCACAAACTTTGGGAAGGGTTATTGGTGGTGTGGGTAGAAAGGGAGAAGCTGAGCGCATTGTTAAAGGAGTAAATCTGTTGATTGCAACGCCTGGTCGTCTTCTTGACCACCTTCAGAATACAAAAGGATTCATATATAAAAACTTGAAGTGTCTCATGATTGATGAAGCAGACAGGATATTGGAATCAAACTTCGAGGAGGAAATGAAGCAGATCCTTAATATACTTCCAAAGAAAAGGCAAACAGCTTTGTTTTCAGCCACACAAACAAAGAAGGTTGAGGATCTTGCCCGCTTGTCTTTTCAGACACCTCCTGTCTATGTTGATGTAGATGTTGGGAGAGAAAAGGTCACTGTTGAAGGATTGGAACAGGGTTATGTTGTTGTTCCCTGTGCCAAGCGTTTTGTTGTTCTGTATTCATTCTTGAAGAGATACCAATCAAAAAAAGTGATGGTGTTTTTCTCTTCATGCAACTCTGTCAAATTCCATGCTGATCTTCTTAAGTTCATTGGATTAGACTGTTTAAATATTCATGGAAAACAAAAGCAGAATTCTCGGACAAGTACCTTTTTCAACTTTTGCAAAGCTGAAAAAGGGATATTGCTCTGTACTGATGTTGCTGCTCGTGGACTTGACATACCTGCTGTGGATTGTGCAATCCCTATGCCTCCCAAGGCCCTTGGTCCGTGTTATGACGTACCAGAATCGCTGAAGTGTGCCGTTGTGGGTGAAATCGAGAGTTCAGTTGAGGTGGCCGCATCCCTCTCACCCAGCACAACTACGGACTGGATTGTGCAGTTTGATCCACCTGATGAACCAAAGGAATATATCCATAGAGTGGGTAGAACAGCTCGTGGGGAAGGTGGAAAAGGAAATGCTTTACTTTTCCTGATTCCTGAAGAATTGCAATTTCTTCGCTACTTGAAGGCAGCAAAGGTTCCTGTGAAAGAGTATGCATTTGATGATAAAAAGCTTTCAAATGTACAGTCTCAACTGGAGAAGATGGTGGCCAGCGTTTATCATTTGAACACTCTGGCCAAAGAGGCTTATAGGTCATATATATTGGCATATAATGCACATTCTATGAAGGAAATATTCAATGTTCACCGCCTTGATTTACAGGCTGTTGCTACCTCATTCTGTTTTACAAACCCACCGAAGATAAGCCTGAACATAGACAGCAGTGCTTCGAAGCATAGGAAGAAAATTCAAAAAGTGGAAGGAGGAAGAAGACATTGA
Protein sequence

>Msa0209020

MAESDNDNHISPENQINDSYKKKNKKLRNRKRSRKLEKELEKQQQQLEEKNNENTESEAEEDEEEKNDKDGDDDIEEIEEKKVENVLPSGILSNESFSSLGLSQRTSQAIAAMSFTHMTQIQAKAIPPLLMGKDVLGAARTGSGKTLAFLIPAVELLYNVQFTPRNGTGVIVICPTRELAIQTHAVASELMKGYHSQTLGRVIGGVGRKGEAERIVKGVNLLIATPGRLLDHLQNTKGFIYKNLKCLMIDEADRILESNFEEEMKQILNILPKKRQTALFSATQTKKVEDLARLSFQTPPVYVDVDVGREKVTVEGLEQGYVVVPCAKRFVVLYSFLKRYQSKKVMVFFSSCNSVKFHADLLKFIGLDCLNIHGKQKQNSRTSTFFNFCKAEKGILLCTDVAARGLDIPAVDCAIPMPPKALGPCYDVPESLKCAVVGEIESSVEVAASLSPSTTTDWIVQFDPPDEPKEYIHRVGRTARGEGGKGNALLFLIPEELQFLRYLKAAKVPVKEYAFDDKKLSNVQSQLEKMVASVYHLNTLAKEAYRSYILAYNAHSMKEIFNVHRLDLQAVATSFCFTNPPKISLNIDSSASKHRKKIQKVEGGRRH*