Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146340 | XP_024631234.1 | 99.180 | 244 | 2 | 0 | 116 | 359 | 1 | 244 | 1.11e-175 | 498 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146340 | sp|Q9LHP1|RL74_ARATH | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.85e-152 | 431 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146340 | A0A396JGV3 | 99.180 | 244 | 2 | 0 | 116 | 359 | 1 | 244 | 5.32e-176 | 498 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002750 | Msa0146340 | 0.898309 | 6.020319e-77 | -8.615850e-47 |
| Msa0002790 | Msa0146340 | 0.880683 | 4.485874e-70 | -8.615850e-47 |
| Msa0003780 | Msa0146340 | 0.967822 | 8.249018e-128 | -8.615850e-47 |
| Msa0022970 | Msa0146340 | 0.845156 | 4.840917e-59 | -8.615850e-47 |
| Msa0027260 | Msa0146340 | 0.842437 | 2.587571e-58 | -8.615850e-47 |
| Msa0032090 | Msa0146340 | 0.836661 | 8.212193e-57 | -8.615850e-47 |
| Msa0032260 | Msa0146340 | 0.837279 | 5.708482e-57 | -8.615850e-47 |
| Msa0032430 | Msa0146340 | 0.813695 | 2.247298e-51 | -8.615850e-47 |
| Msa0032580 | Msa0146340 | 0.809834 | 1.555118e-50 | -8.615850e-47 |
| Msa0032780 | Msa0146340 | 0.801584 | 8.404862e-49 | -8.615850e-47 |
| Msa0037250 | Msa0146340 | 0.829568 | 4.786993e-55 | -8.615850e-47 |
| Msa0040690 | Msa0146340 | 0.880726 | 4.330080e-70 | -8.615850e-47 |
| Msa0042280 | Msa0146340 | 0.836892 | 7.171008e-57 | -8.615850e-47 |
| Msa0045730 | Msa0146340 | 0.870994 | 9.579626e-67 | -8.615850e-47 |
| Msa0047160 | Msa0146340 | 0.863159 | 3.038024e-64 | -8.615850e-47 |
| Msa0048180 | Msa0146340 | 0.844416 | 7.666019e-59 | -8.615850e-47 |
| Msa0049370 | Msa0146340 | 0.822221 | 2.659650e-53 | -8.615850e-47 |
| Msa0052790 | Msa0146340 | 0.818747 | 1.668435e-52 | -8.615850e-47 |
| Msa0055180 | Msa0146340 | 0.829405 | 5.242602e-55 | -8.615850e-47 |
| Msa0056470 | Msa0146340 | 0.852984 | 3.225035e-61 | -8.615850e-47 |
| Msa0073480 | Msa0146340 | 0.826681 | 2.374077e-54 | -8.615850e-47 |
| Msa0074030 | Msa0146340 | 0.831512 | 1.600341e-55 | -8.615850e-47 |
| Msa0074320 | Msa0146340 | 0.818209 | 2.208378e-52 | -8.615850e-47 |
| Msa0086750 | Msa0146340 | 0.876470 | 1.361309e-68 | -8.615850e-47 |
| Msa0091880 | Msa0146340 | 0.867563 | 1.247800e-65 | -8.615850e-47 |
| Msa0094470 | Msa0146340 | 0.869529 | 2.891630e-66 | -8.615850e-47 |
| Msa0097580 | Msa0146340 | 0.864659 | 1.037242e-64 | -8.615850e-47 |
| Msa0097600 | Msa0146340 | 0.813122 | 3.003373e-51 | -8.615850e-47 |
| Msa0100740 | Msa0146340 | 0.816813 | 4.556504e-52 | -8.615850e-47 |
| Msa0116130 | Msa0146340 | 0.847064 | 1.464471e-59 | -8.615850e-47 |
| Msa0116670 | Msa0146340 | 0.830373 | 3.046921e-55 | -8.615850e-47 |
| Msa0118710 | Msa0146340 | 0.835798 | 1.360212e-56 | -8.615850e-47 |
| Msa0127310 | Msa0146340 | 0.838162 | 3.387260e-57 | -8.615850e-47 |
| Msa0128860 | Msa0146340 | 0.846851 | 1.675149e-59 | -8.615850e-47 |
| Msa0133540 | Msa0146340 | 0.878098 | 3.694623e-69 | -8.615850e-47 |
| Msa0137550 | Msa0146340 | 0.803067 | 4.161172e-49 | -8.615850e-47 |
| Msa0138920 | Msa0146340 | 0.849463 | 3.181289e-60 | -8.615850e-47 |
| Msa0140820 | Msa0146340 | 0.828721 | 7.681600e-55 | -8.615850e-47 |
| Msa0140850 | Msa0146340 | 0.803201 | 3.903473e-49 | -8.615850e-47 |
| Msa0146340 | Msa0149200 | 0.801750 | 7.770083e-49 | -8.615850e-47 |
| Msa0146340 | Msa0150300 | 0.847195 | 1.348267e-59 | -8.615850e-47 |
| Msa0146340 | Msa0167480 | 0.802020 | 6.840146e-49 | -8.615850e-47 |
| Msa0146340 | Msa0172070 | 0.820368 | 7.119010e-53 | -8.615850e-47 |
| Msa0146340 | Msa0172970 | 0.807559 | 4.764294e-50 | -8.615850e-47 |
| Msa0146340 | Msa0173530 | 0.827694 | 1.358277e-54 | -8.615850e-47 |
| Msa0146340 | Msa0174730 | 0.845778 | 3.283899e-59 | -8.615850e-47 |
| Msa0146340 | Msa0180020 | 0.826683 | 2.371208e-54 | -8.615850e-47 |
| Msa0146340 | Msa0181490 | 0.862600 | 4.519675e-64 | -8.615850e-47 |
| Msa0146340 | Msa0187690 | 0.828907 | 6.925238e-55 | -8.615850e-47 |
| Msa0146340 | Msa0187930 | 0.863544 | 2.308753e-64 | -8.615850e-47 |
| Msa0146340 | Msa0189700 | 0.830457 | 2.905557e-55 | -8.615850e-47 |
| Msa0146340 | Msa0194540 | 0.857237 | 1.871767e-62 | -8.615850e-47 |
| Msa0146340 | Msa0209020 | 0.806986 | 6.301126e-50 | -8.615850e-47 |
| Msa0146340 | Msa0219120 | 0.810929 | 9.026570e-51 | -8.615850e-47 |
| Msa0146340 | Msa0222730 | 0.807269 | 5.489072e-50 | -8.615850e-47 |
| Msa0146340 | Msa0230490 | 0.850555 | 1.573934e-60 | -8.615850e-47 |
| Msa0146340 | Msa0231100 | 0.802239 | 6.165805e-49 | -8.615850e-47 |
| Msa0146340 | Msa0232010 | 0.834961 | 2.214273e-56 | -8.615850e-47 |
| Msa0146340 | Msa0232080 | 0.839069 | 1.975114e-57 | -8.615850e-47 |
| Msa0146340 | Msa0242410 | 0.800729 | 1.257121e-48 | -8.615850e-47 |
| Msa0146340 | Msa0244780 | 0.866327 | 3.091638e-65 | -8.615850e-47 |
| Msa0146340 | Msa0250820 | 0.884305 | 2.147522e-71 | -8.615850e-47 |
| Msa0146340 | Msa0250870 | 0.821467 | 3.975901e-53 | -8.615850e-47 |
| Msa0146340 | Msa0258850 | 0.829806 | 4.189272e-55 | -8.615850e-47 |
| Msa0146340 | Msa0262310 | 0.831729 | 1.415542e-55 | -8.615850e-47 |
| Msa0146340 | Msa0264010 | 0.900998 | 4.177002e-78 | -8.615850e-47 |
| Msa0146340 | Msa0264570 | 0.806992 | 6.282975e-50 | -8.615850e-47 |
| Msa0146340 | Msa0267970 | 0.817386 | 3.387178e-52 | -8.615850e-47 |
| Msa0146340 | Msa0268130 | 0.866927 | 1.992800e-65 | -8.615850e-47 |
| Msa0146340 | Msa0280610 | 0.801586 | 8.394832e-49 | -8.615850e-47 |
| Msa0146340 | Msa0289580 | 0.878150 | 3.543871e-69 | -8.615850e-47 |
| Msa0146340 | Msa0289610 | 0.882646 | 8.746211e-71 | -8.615850e-47 |
| Msa0146340 | Msa0298140 | 0.830932 | 2.222924e-55 | -8.615850e-47 |
| Msa0146340 | Msa0298200 | 0.824485 | 7.870304e-54 | -8.615850e-47 |
| Msa0146340 | Msa0298990 | 0.868021 | 8.894519e-66 | -8.615850e-47 |
| Msa0146340 | Msa0304590 | 0.800619 | 1.323747e-48 | -8.615850e-47 |
| Msa0146340 | Msa0306690 | 0.851593 | 8.021530e-61 | -8.615850e-47 |
| Msa0146340 | Msa0317910 | 0.813771 | 2.161797e-51 | -8.615850e-47 |
| Msa0146340 | Msa0321640 | 0.840481 | 8.471757e-58 | -8.615850e-47 |
| Msa0146340 | Msa0327300 | 0.878627 | 2.409047e-69 | -8.615850e-47 |
| Msa0146340 | Msa0327330 | 0.939722 | 7.871925e-100 | -8.615850e-47 |
| Msa0146340 | Msa0336010 | 0.886654 | 2.833838e-72 | -8.615850e-47 |
| Msa0146340 | Msa0337650 | 0.833972 | 3.922496e-56 | -8.615850e-47 |
| Msa0146340 | Msa0337670 | 0.824395 | 8.260945e-54 | -8.615850e-47 |
| Msa0146340 | Msa0348830 | 0.881048 | 3.316813e-70 | -8.615850e-47 |
| Msa0146340 | Msa0366890 | 0.847815 | 9.108790e-60 | -8.615850e-47 |
| Msa0146340 | Msa0369450 | 0.834472 | 2.938533e-56 | -8.615850e-47 |
| Msa0146340 | Msa0385300 | 0.803894 | 2.803647e-49 | -8.615850e-47 |
| Msa0146340 | Msa0385580 | 0.835249 | 1.872674e-56 | -8.615850e-47 |
| Msa0146340 | Msa0395890 | 0.843206 | 1.615616e-58 | -8.615850e-47 |
| Msa0146340 | Msa0414800 | 0.836808 | 7.529959e-57 | -8.615850e-47 |
| Msa0146340 | Msa0427150 | 0.860558 | 1.899743e-63 | -8.615850e-47 |
| Msa0146340 | Msa0432210 | 0.803128 | 4.041240e-49 | -8.615850e-47 |
| Msa0146340 | Msa0443390 | 0.858370 | 8.629898e-63 | -8.615850e-47 |
| Msa0146340 | Msa0447220 | 0.802798 | 4.728860e-49 | -8.615850e-47 |
| Msa0146340 | Msa0458060 | 0.828551 | 8.440809e-55 | -8.615850e-47 |
| Msa0146340 | Msa0479430 | 0.816062 | 6.712611e-52 | -8.615850e-47 |
| Msa0146340 | Msa0481850 | 0.841771 | 3.882885e-58 | -8.615850e-47 |
| Msa0146340 | Msa0483110 | 0.877445 | 6.250041e-69 | -8.615850e-47 |
| Msa0146340 | Msa0521050 | 0.839993 | 1.136134e-57 | -8.615850e-47 |
| Msa0146340 | Msa0523120 | 0.814726 | 1.330562e-51 | -8.615850e-47 |
| Msa0146340 | Msa0526540 | 0.870454 | 1.442222e-66 | -8.615850e-47 |
| Msa0146340 | Msa0527150 | 0.817827 | 2.694946e-52 | -8.615850e-47 |
| Msa0146340 | Msa0530820 | 0.800473 | 1.417700e-48 | -8.615850e-47 |
| Msa0146340 | Msa0531650 | 0.800059 | 1.721523e-48 | -8.615850e-47 |
| Msa0146340 | Msa0534750 | 0.803603 | 3.222219e-49 | -8.615850e-47 |
| Msa0146340 | Msa0547940 | 0.831266 | 1.840581e-55 | -8.615850e-47 |
| Msa0146340 | Msa0554920 | 0.808419 | 3.125909e-50 | -8.615850e-47 |
| Msa0146340 | Msa0571920 | 0.822360 | 2.469842e-53 | -8.615850e-47 |
| Msa0146340 | Msa0575170 | 0.801005 | 1.104076e-48 | -8.615850e-47 |
| Msa0146340 | Msa0576940 | 0.873253 | 1.696381e-67 | -8.615850e-47 |
| Msa0146340 | Msa0581110 | 0.803569 | 3.274978e-49 | -8.615850e-47 |
| Msa0146340 | Msa0588360 | 0.837893 | 3.973069e-57 | -8.615850e-47 |
| Msa0146340 | Msa0602920 | 0.832252 | 1.051246e-55 | -8.615850e-47 |
| Msa0146340 | Msa0603320 | 0.846823 | 1.705286e-59 | -8.615850e-47 |
| Msa0146340 | Msa0608500 | 0.808648 | 2.792651e-50 | -8.615850e-47 |
| Msa0146340 | Msa0612390 | 0.815671 | 8.204052e-52 | -8.615850e-47 |
| Msa0146340 | Msa0615440 | 0.856078 | 4.101966e-62 | -8.615850e-47 |
| Msa0146340 | Msa0615990 | 0.803597 | 3.231891e-49 | -8.615850e-47 |
| Msa0146340 | Msa0620890 | 0.824641 | 7.231362e-54 | -8.615850e-47 |
| Msa0146340 | Msa0621950 | 0.805971 | 1.031841e-49 | -8.615850e-47 |
| Msa0146340 | Msa0622750 | 0.899801 | 1.382065e-77 | -8.615850e-47 |
| Msa0146340 | Msa0623200 | 0.880757 | 4.218952e-70 | -8.615850e-47 |
| Msa0146340 | Msa0623790 | 0.812391 | 4.341477e-51 | -8.615850e-47 |
| Msa0146340 | Msa0643560 | 0.806593 | 7.630398e-50 | -8.615850e-47 |
| Msa0146340 | Msa0643980 | 0.804355 | 2.248255e-49 | -8.615850e-47 |
| Msa0146340 | Msa0647500 | 0.800961 | 1.127003e-48 | -8.615850e-47 |
| Msa0146340 | Msa0661300 | 0.849724 | 2.690183e-60 | -8.615850e-47 |
| Msa0146340 | Msa0666230 | 0.824221 | 9.075840e-54 | -8.615850e-47 |
| Msa0146340 | Msa0669520 | 0.803972 | 2.701003e-49 | -8.615850e-47 |
| Msa0146340 | Msa0688850 | 0.819036 | 1.434063e-52 | -8.615850e-47 |
| Msa0146340 | Msa0691900 | 0.825891 | 3.659573e-54 | -8.615850e-47 |
| Msa0146340 | Msa0698490 | 0.857151 | 1.984012e-62 | -8.615850e-47 |
| Msa0146340 | Msa0698660 | 0.861312 | 1.120531e-63 | -8.615850e-47 |
| Msa0146340 | Msa0698780 | 0.868562 | 5.955197e-66 | -8.615850e-47 |
| Msa0146340 | Msa0712610 | 0.827438 | 1.564423e-54 | -8.615850e-47 |
| Msa0146340 | Msa0738100 | 0.828107 | 1.080492e-54 | -8.615850e-47 |
| Msa0146340 | Msa0753140 | 0.812261 | 4.634649e-51 | -8.615850e-47 |
| Msa0146340 | Msa0769590 | 0.808847 | 2.532457e-50 | -8.615850e-47 |
| Msa0146340 | Msa0780490 | 0.862406 | 5.185378e-64 | -8.615850e-47 |
| Msa0146340 | Msa0785130 | 0.835662 | 1.472504e-56 | -8.615850e-47 |
| Msa0146340 | Msa0788850 | 0.841332 | 5.067261e-58 | -8.615850e-47 |
| Msa0146340 | Msa0792420 | 0.807049 | 6.111856e-50 | -8.615850e-47 |
| Msa0146340 | Msa0792760 | 0.828601 | 8.213295e-55 | -8.615850e-47 |
| Msa0146340 | Msa0806880 | 0.833080 | 6.547251e-56 | -8.615850e-47 |
| Msa0146340 | Msa0817540 | 0.832584 | 8.696239e-56 | -8.615850e-47 |
| Msa0146340 | Msa0849500 | 0.809314 | 2.011261e-50 | -8.615850e-47 |
| Msa0146340 | Msa0849510 | 0.818109 | 2.326829e-52 | -8.615850e-47 |
| Msa0146340 | Msa0867060 | 0.843978 | 1.004378e-58 | -8.615850e-47 |
| Msa0146340 | Msa0881290 | 0.830088 | 3.575783e-55 | -8.615850e-47 |
| Msa0146340 | Msa0888810 | 0.802612 | 5.166297e-49 | -8.615850e-47 |
| Msa0146340 | Msa0902760 | 0.819967 | 8.793627e-53 | -8.615850e-47 |
| Msa0146340 | Msa0906780 | 0.803253 | 3.808127e-49 | -8.615850e-47 |
| Msa0146340 | Msa0945990 | 0.836187 | 1.083921e-56 | -8.615850e-47 |
| Msa0146340 | Msa0953310 | 0.872325 | 3.468295e-67 | -8.615850e-47 |
| Msa0146340 | Msa0968590 | 0.820521 | 6.564399e-53 | -8.615850e-47 |
| Msa0146340 | Msa0970060 | 0.803792 | 2.944050e-49 | -8.615850e-47 |
| Msa0146340 | Msa0989540 | 0.822339 | 2.498089e-53 | -8.615850e-47 |
| Msa0146340 | Msa1006840 | 0.860348 | 2.199760e-63 | -8.615850e-47 |
| Msa0146340 | Msa1010310 | 0.821900 | 3.156886e-53 | -8.615850e-47 |
| Msa0146340 | Msa1012740 | 0.822045 | 2.922194e-53 | -8.615850e-47 |
| Msa0146340 | Msa1013400 | 0.828122 | 1.071420e-54 | -8.615850e-47 |
| Msa0146340 | Msa1019240 | 0.871970 | 4.553198e-67 | -8.615850e-47 |
| Msa0146340 | Msa1019260 | 0.873296 | 1.641103e-67 | -8.615850e-47 |
| Msa0146340 | Msa1039520 | 0.803828 | 2.893074e-49 | -8.615850e-47 |
| Msa0146340 | Msa1042780 | 0.846258 | 2.432165e-59 | -8.615850e-47 |
| Msa0146340 | Msa1043690 | 0.944754 | 1.089408e-103 | -8.615850e-47 |
| Msa0146340 | Msa1051880 | 0.850481 | 1.651434e-60 | -8.615850e-47 |
| Msa0146340 | Msa1080350 | 0.848371 | 6.394480e-60 | -8.615850e-47 |
| Msa0146340 | Msa1081150 | 0.862892 | 3.673591e-64 | -8.615850e-47 |
| Msa0146340 | Msa1088490 | 0.859358 | 4.372215e-63 | -8.615850e-47 |
| Msa0146340 | Msa1088940 | 0.845273 | 4.500447e-59 | -8.615850e-47 |
| Msa0146340 | Msa1093530 | 0.818162 | 2.263264e-52 | -8.615850e-47 |
| Msa0146340 | Msa1104140 | 0.900465 | 7.129631e-78 | -8.615850e-47 |
| Msa0146340 | Msa1104210 | 0.878023 | 3.926736e-69 | -8.615850e-47 |
| Msa0146340 | Msa1125860 | 0.854940 | 8.808577e-62 | -8.615850e-47 |
| Msa0146340 | Msa1126060 | 0.851902 | 6.558261e-61 | -8.615850e-47 |
| Msa0146340 | Msa1126510 | 0.852724 | 3.825038e-61 | -8.615850e-47 |
| Msa0146340 | Msa1126770 | 0.806220 | 9.145558e-50 | -8.615850e-47 |
| Msa0146340 | Msa1126830 | 0.807642 | 4.575257e-50 | -8.615850e-47 |
| Msa0146340 | Msa1135890 | 0.822886 | 1.863045e-53 | -8.615850e-47 |
| Msa0146340 | Msa1165940 | 0.835064 | 2.085452e-56 | -8.615850e-47 |
| Msa0146340 | Msa1166860 | 0.873189 | 1.782451e-67 | -8.615850e-47 |
| Msa0146340 | Msa1166870 | 0.844175 | 8.897092e-59 | -8.615850e-47 |
| Msa0146340 | Msa1173160 | 0.810434 | 1.154891e-50 | -8.615850e-47 |
| Msa0146340 | Msa1179950 | 0.813233 | 2.839419e-51 | -8.615850e-47 |
| Msa0146340 | Msa1179980 | 0.800388 | 1.475637e-48 | -8.615850e-47 |
| Msa0146340 | Msa1181830 | 0.810841 | 9.432082e-51 | -8.615850e-47 |
| Msa0146340 | Msa1181850 | 0.831642 | 1.486799e-55 | -8.615850e-47 |
| Msa0146340 | Msa1181860 | 0.826495 | 2.629674e-54 | -8.615850e-47 |
| Msa0146340 | Msa1206670 | 0.813006 | 3.184353e-51 | -8.615850e-47 |
| Msa0146340 | Msa1207270 | 0.813041 | 3.129090e-51 | -8.615850e-47 |
| Msa0146340 | Msa1209200 | 0.804300 | 2.308542e-49 | -8.615850e-47 |
| Msa0146340 | Msa1215820 | 0.891144 | 5.192254e-74 | -8.615850e-47 |
| Msa0146340 | Msa1218140 | 0.818801 | 1.621854e-52 | -8.615850e-47 |
| Msa0146340 | Msa1218600 | 0.819485 | 1.133350e-52 | -8.615850e-47 |
| Msa0146340 | Msa1257510 | 0.862096 | 6.456050e-64 | -8.615850e-47 |
| Msa0146340 | Msa1265630 | 0.862755 | 4.048879e-64 | -8.615850e-47 |
| Msa0146340 | Msa1266060 | 0.840960 | 6.347991e-58 | -8.615850e-47 |
| Msa0146340 | Msa1295150 | 0.817430 | 3.310641e-52 | -8.615850e-47 |
| Msa0146340 | Msa1295170 | 0.831735 | 1.410178e-55 | -8.615850e-47 |
| Msa0146340 | Msa1299590 | 0.801429 | 9.042344e-49 | -8.615850e-47 |
| Msa0146340 | Msa1305050 | 0.829369 | 5.350784e-55 | -8.615850e-47 |
| Msa0146340 | Msa1338190 | 0.866411 | 2.908758e-65 | -8.615850e-47 |
| Msa0146340 | Msa1343260 | 0.844730 | 6.306896e-59 | -8.615850e-47 |
| Msa0146340 | Msa1349570 | 0.819738 | 9.921593e-53 | -8.615850e-47 |
| Msa0146340 | Msa1356790 | 0.834754 | 2.495967e-56 | -8.615850e-47 |
| Msa0146340 | Msa1362790 | 0.863679 | 2.095822e-64 | -8.615850e-47 |
| Msa0146340 | Msa1363330 | 0.872694 | 2.611737e-67 | -8.615850e-47 |
| Msa0146340 | Msa1366180 | 0.875102 | 4.013389e-68 | -8.615850e-47 |
| Msa0146340 | Msa1369190 | 0.841722 | 4.000524e-58 | -8.615850e-47 |
| Msa0146340 | Msa1374120 | 0.933394 | 2.007883e-95 | -8.615850e-47 |
| Msa0146340 | Msa1379760 | 0.853228 | 2.745203e-61 | -8.615850e-47 |
| Msa0146340 | Msa1382620 | 0.867726 | 1.106914e-65 | -8.615850e-47 |
| Msa0146340 | Msa1386600 | 0.873457 | 1.448518e-67 | -8.615850e-47 |
| Msa0146340 | Msa1387410 | 0.800304 | 1.534459e-48 | -8.615850e-47 |
| Msa0146340 | Msa1391410 | 0.806411 | 8.332789e-50 | -8.615850e-47 |
| Msa0146340 | Msa1394290 | 0.871111 | 8.766220e-67 | -8.615850e-47 |
| Msa0146340 | Msa1399530 | 0.927026 | 2.083798e-91 | -8.615850e-47 |
| Msa0146340 | Msa1407070 | 0.862436 | 5.075592e-64 | -8.615850e-47 |
| Msa0146340 | Msa1410440 | 0.845521 | 3.855481e-59 | -8.615850e-47 |
| Msa0146340 | Msa1413500 | 0.838822 | 2.288185e-57 | -8.615850e-47 |
| Msa0146340 | Msa1426490 | 0.812042 | 5.171823e-51 | -8.615850e-47 |
| Msa0146340 | Msa1427560 | 0.829539 | 4.865256e-55 | -8.615850e-47 |
| Msa0146340 | Msa1432700 | 0.854373 | 1.285562e-61 | -8.615850e-47 |
| Msa0146340 | Msa1433310 | 0.842693 | 2.213274e-58 | -8.615850e-47 |
| Msa0146340 | Msa1437860 | 0.822720 | 2.036734e-53 | -8.615850e-47 |
| Msa0146340 | Msa1448690 | 0.867360 | 1.449463e-65 | -8.615850e-47 |
| Msa0146340 | Msa1450280 | 0.828775 | 7.452861e-55 | -8.615850e-47 |
| Msa0146340 | Msa1456050 | 0.858831 | 6.286749e-63 | -8.615850e-47 |
| Msa0146340 | Msa1457920 | 0.820699 | 5.976214e-53 | -8.615850e-47 |
| Msa0146340 | Msa1462860 | 0.809362 | 1.964277e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146340 | MtrunA17_Chr1g0155331 | 99.180 | 244 | 2 | 0 | 116 | 359 | 1 | 244 | 1.02e-179 | 498 |
| Msa0146340 | MtrunA17_Chr2g0298841 | 97.951 | 244 | 5 | 0 | 116 | 359 | 1 | 244 | 7.34e-177 | 490 |
| Msa0146340 | MtrunA17_Chr4g0002321 | 87.137 | 241 | 31 | 0 | 119 | 359 | 3 | 243 | 9.13e-159 | 444 |
| Msa0146340 | MtrunA17_Chr7g0237701 | 46.383 | 235 | 125 | 1 | 125 | 359 | 13 | 246 | 1.22e-72 | 226 |
| Msa0146340 | MtrunA17_Chr1g0155311 | 98.361 | 61 | 1 | 0 | 289 | 349 | 2 | 62 | 5.27e-40 | 135 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0146340 | AT3G13580.5 | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.88e-153 | 431 |
| Msa0146340 | AT3G13580.4 | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.88e-153 | 431 |
| Msa0146340 | AT3G13580.2 | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.88e-153 | 431 |
| Msa0146340 | AT3G13580.3 | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.88e-153 | 431 |
| Msa0146340 | AT3G13580.1 | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.88e-153 | 431 |
| Msa0146340 | AT3G13580.7 | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.88e-153 | 431 |
| Msa0146340 | AT3G13580.8 | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.88e-153 | 431 |
| Msa0146340 | AT3G13580.6 | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.88e-153 | 431 |
| Msa0146340 | AT3G13580.9 | 82.787 | 244 | 42 | 0 | 116 | 359 | 1 | 244 | 1.88e-153 | 431 |
| Msa0146340 | AT2G01250.1 | 84.583 | 240 | 37 | 0 | 120 | 359 | 3 | 242 | 6.54e-151 | 425 |
| Msa0146340 | AT2G44120.1 | 83.750 | 240 | 39 | 0 | 120 | 359 | 3 | 242 | 2.28e-150 | 424 |
| Msa0146340 | AT2G44120.2 | 83.750 | 240 | 39 | 0 | 120 | 359 | 8 | 247 | 2.42e-150 | 424 |
| Msa0146340 | AT2G01250.2 | 82.249 | 169 | 30 | 0 | 120 | 288 | 3 | 171 | 1.09e-95 | 283 |
| Msa0146340 | AT1G80750.1 | 42.915 | 247 | 138 | 2 | 116 | 359 | 1 | 247 | 5.30e-62 | 199 |
Find 105 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATCTTCCTTGATTT+TGG | 0.006132 | 1_4:+6030344 | None:intergenic |
| TGAAATATCAATGGGCTTTA+TGG | 0.044564 | 1_4:+6031650 | None:intergenic |
| CTAAGCTCTTGTTCATTATT+AGG | 0.173523 | 1_4:-6030500 | Msa0146340:CDS |
| TGCTTCTTCAAAACGGATTC+AGG | 0.216526 | 1_4:+6031345 | None:intergenic |
| TTAAAGCAAAACTGGGATTA+AGG | 0.234875 | 1_4:+6027956 | None:intergenic |
| GGGAGTTATCTCCCGTTTCT+TGG | 0.252457 | 1_4:+6031811 | None:intergenic |
| CTTTATGGACTGACATGTTA+TGG | 0.294763 | 1_4:+6031665 | None:intergenic |
| CCCTGACGCTCTTCAGATTA+GGG | 0.318959 | 1_4:+6028538 | None:intergenic |
| GATCTTTAATATTTAGTTCA+TGG | 0.321508 | 1_4:-6027898 | Msa0146340:three_prime_UTR |
| TTATCCAATGGGCAGGTTCT+TGG | 0.334500 | 1_4:-6028241 | Msa0146340:intron |
| ATATTCCTTGGCGTATTGTT+TGG | 0.342275 | 1_4:+6031227 | None:intergenic |
| GTCAAGGATGAATAAGTAAA+AGG | 0.346460 | 1_4:+6027846 | None:intergenic |
| AGTAAGCTTTAAAACTGAAT+TGG | 0.358565 | 1_4:+6027819 | None:intergenic |
| AAGAAAATGAAACTAGGGTT+TGG | 0.374936 | 1_4:+6031583 | None:intergenic |
| TATCCAATGGGCAGGTTCTT+GGG | 0.378090 | 1_4:-6028240 | Msa0146340:intron |
| TTGTGTTGTCAATTTGCTGC+TGG | 0.382857 | 1_4:-6031915 | Msa0146340:CDS |
| CTGAAACAAGGAAACTCATT+TGG | 0.390452 | 1_4:-6031257 | Msa0146340:CDS |
| TCCCTGACGCTCTTCAGATT+AGG | 0.391787 | 1_4:+6028537 | None:intergenic |
| TGGACTGACATGTTATGGGC+TGG | 0.396514 | 1_4:+6031670 | None:intergenic |
| CTCTGCCCTTGAAATATCAA+TGG | 0.397811 | 1_4:+6031641 | None:intergenic |
| AAGGTGGTGATGCTGGAAAC+AGG | 0.400679 | 1_4:-6028072 | Msa0146340:CDS |
| TTTATGGACTGACATGTTAT+GGG | 0.405296 | 1_4:+6031666 | None:intergenic |
| AGCAGAAAAGGAACGAAGAA+TGG | 0.407682 | 1_4:-6031326 | Msa0146340:CDS |
| AGATAGAAACCGAACAGTTC+GGG | 0.408007 | 1_4:+6031791 | None:intergenic |
| ACCCTAATCTGAAGAGCGTC+AGG | 0.410603 | 1_4:-6028539 | Msa0146340:CDS |
| CATTTGCAACACCTTGCGTT+TGG | 0.416335 | 1_4:-6031949 | Msa0146340:CDS |
| ATTTAGTTCATGGCCTTGCC+TGG | 0.417457 | 1_4:-6027888 | Msa0146340:three_prime_UTR |
| CGCCAAGGAATATGATGATC+AGG | 0.420081 | 1_4:-6031217 | Msa0146340:intron |
| ATGAACAAGAGCTTAGCTTC+AGG | 0.424828 | 1_4:+6030507 | None:intergenic |
| TTTCTTCTTCATACCACCTA+GGG | 0.429478 | 1_4:+6028111 | None:intergenic |
| GAGATAGAAACCGAACAGTT+CGG | 0.432762 | 1_4:+6031790 | None:intergenic |
| AGACAACTCAATCATTGAAC+AGG | 0.442244 | 1_4:-6028460 | Msa0146340:intron |
| TAAAGCCCATTGATATTTCA+AGG | 0.446126 | 1_4:-6031647 | Msa0146340:CDS |
| AACTCGTGAAATCCAAGAAA+CGG | 0.462620 | 1_4:-6031823 | Msa0146340:CDS |
| AGAAAATGAAACTAGGGTTT+GGG | 0.462952 | 1_4:+6031584 | None:intergenic |
| GAGATAACTCCCGAACTGTT+CGG | 0.466982 | 1_4:-6031800 | Msa0146340:CDS |
| CTCGATAGAAGGAACCATTC+GGG | 0.469662 | 1_4:-6031850 | Msa0146340:CDS |
| TGAACAAGAGCTTAGCTTCA+GGG | 0.470751 | 1_4:+6030508 | None:intergenic |
| TCTGCCCTTGAAATATCAAT+GGG | 0.486107 | 1_4:+6031642 | None:intergenic |
| TATGTGGAAGGTGGTGATGC+TGG | 0.489381 | 1_4:-6028079 | Msa0146340:CDS |
| ATTGGTGAAGAAGCAGGAAC+AGG | 0.496788 | 1_4:-6031301 | Msa0146340:CDS |
| AACCCTGTGGAGCATGTTCA+CGG | 0.497828 | 1_4:+6028584 | None:intergenic |
| ACTCGTGAAATCCAAGAAAC+GGG | 0.498177 | 1_4:-6031822 | Msa0146340:CDS |
| TTGATCTACAAGAGGGGCTA+CGG | 0.499583 | 1_4:-6028513 | Msa0146340:CDS |
| CTACCGTGAACATGCTCCAC+AGG | 0.502553 | 1_4:-6028587 | Msa0146340:CDS |
| GGCAAAATGCACAAGAAACC+CGG | 0.503981 | 1_4:+6031875 | None:intergenic |
| GGGTACCCGTATGTAACATA+AGG | 0.504429 | 1_4:+6028558 | None:intergenic |
| ACTCGATAGAAGGAACCATT+CGG | 0.506910 | 1_4:-6031851 | Msa0146340:CDS |
| GCAGAAAAGGAACGAAGAAT+GGG | 0.509066 | 1_4:-6031325 | Msa0146340:CDS |
| TACCTGATCATCATATTCCT+TGG | 0.513381 | 1_4:+6031215 | None:intergenic |
| GGACTGACATGTTATGGGCT+GGG | 0.514055 | 1_4:+6031671 | None:intergenic |
| GGGGCTACGGCAAAGTTGAC+AGG | 0.514631 | 1_4:-6028500 | Msa0146340:CDS |
| TGCAGCAAAAGGAGTTGATC+AGG | 0.517555 | 1_4:-6030572 | Msa0146340:intron |
| ATGGGCATTGGTGAAGAAGC+AGG | 0.518449 | 1_4:-6031307 | Msa0146340:CDS |
| GTTGAGCCTTATGTTACATA+CGG | 0.518747 | 1_4:-6028564 | Msa0146340:CDS |
| GTGTACAACCATTCTACTCC+GGG | 0.518966 | 1_4:-6031893 | Msa0146340:CDS |
| TGGAGAAGAAAATGAAACTA+GGG | 0.520258 | 1_4:+6031578 | None:intergenic |
| AGGGGAGCTTTGAGCTTGAA+AGG | 0.525834 | 1_4:+6028130 | None:intergenic |
| GTCGAAAGAGGAAGTGAAAA+CGG | 0.538106 | 1_4:-6031373 | Msa0146340:CDS |
| ACGCTATGGACCCAAAATCA+AGG | 0.543591 | 1_4:-6030355 | Msa0146340:CDS |
| AGCAAATTGACAACACAAGT+TGG | 0.543635 | 1_4:+6031920 | None:intergenic |
| AAAAGAAATCATTATGTGGA+AGG | 0.546296 | 1_4:-6028091 | Msa0146340:CDS |
| GGTGTACAACCATTCTACTC+CGG | 0.548294 | 1_4:-6031894 | Msa0146340:CDS |
| ACAAGAAACCCGGAGTAGAA+TGG | 0.548536 | 1_4:+6031885 | None:intergenic |
| TTGTGTGAGATTAATTATCA+AGG | 0.551506 | 1_4:-6027994 | Msa0146340:three_prime_UTR |
| ATGGAGAAGAAAATGAAACT+AGG | 0.552088 | 1_4:+6031577 | None:intergenic |
| AATGGTTCCTTCTATCGAGT+TGG | 0.553521 | 1_4:+6031854 | None:intergenic |
| TGTTTGAAGGATGTCGAAAG+AGG | 0.557035 | 1_4:-6031385 | Msa0146340:intron |
| TTCACGAGTTATCTCCCGAA+TGG | 0.558151 | 1_4:+6031836 | None:intergenic |
| TTGTTCATTATTAGGATCAG+AGG | 0.561223 | 1_4:-6030492 | Msa0146340:CDS |
| CTTTGAGCTTGAAAGGCCAC+AGG | 0.568038 | 1_4:+6028137 | None:intergenic |
| AAACTGAATTGGCAAAGTCA+AGG | 0.571654 | 1_4:+6027830 | None:intergenic |
| GAAGAAAAGAAATCATTATG+TGG | 0.573776 | 1_4:-6028095 | Msa0146340:CDS |
| TGTTCATTATTAGGATCAGA+GGG | 0.574120 | 1_4:-6030491 | Msa0146340:intron |
| GAAGCGTGAAGCTAAACTCA+AGG | 0.589756 | 1_4:-6030547 | Msa0146340:CDS |
| AGAAATCATTATGTGGAAGG+TGG | 0.590613 | 1_4:-6028088 | Msa0146340:CDS |
| CTTGCCGCAGTAGATGGAGA+TGG | 0.596202 | 1_4:+6031558 | None:intergenic |
| AGAAGAAGAGAGCTGAAACA+AGG | 0.596539 | 1_4:-6031269 | Msa0146340:CDS |
| TTGAGCCTTATGTTACATAC+GGG | 0.597990 | 1_4:-6028563 | Msa0146340:CDS |
| AAAGCCCATTGATATTTCAA+GGG | 0.606981 | 1_4:-6031646 | Msa0146340:CDS |
| TTGTTTGCCTCTCTGAAGTG+AGG | 0.607151 | 1_4:+6028163 | None:intergenic |
| AAATTGACAACACAAGTTGG+AGG | 0.607249 | 1_4:+6031923 | None:intergenic |
| GGGCAGGTTCTTGGGAAGCA+CGG | 0.607398 | 1_4:-6028232 | Msa0146340:intron |
| TTCTTCTTCATACCACCTAG+GGG | 0.609907 | 1_4:+6028112 | None:intergenic |
| TTCAAGCTCAAAGCTCCCCT+AGG | 0.610220 | 1_4:-6028127 | Msa0146340:CDS |
| AAGGAACGAAGAATGGGCAT+TGG | 0.610396 | 1_4:-6031319 | Msa0146340:CDS |
| CAGGGAATTGATCTACAAGA+GGG | 0.615110 | 1_4:-6028520 | Msa0146340:CDS |
| TTCTCCATCTCCATCTACTG+CGG | 0.616953 | 1_4:-6031562 | Msa0146340:CDS |
| GAGAGGCAAACAACTTCCTG+TGG | 0.626203 | 1_4:-6028153 | Msa0146340:CDS |
| ACATCAACGAACTCATCAGA+AGG | 0.630261 | 1_4:-6028042 | Msa0146340:CDS |
| TCAGGGAATTGATCTACAAG+AGG | 0.639447 | 1_4:-6028521 | Msa0146340:CDS |
| CGTGAAGCTAAACTCAAGGG+TGG | 0.639969 | 1_4:-6030543 | Msa0146340:CDS |
| CATCTCCATCTACTGCGGCA+AGG | 0.640380 | 1_4:-6031557 | Msa0146340:intron |
| AGGTGGTGATGCTGGAAACA+GGG | 0.642090 | 1_4:-6028071 | Msa0146340:CDS |
| TACCGTGAACATGCTCCACA+GGG | 0.645382 | 1_4:-6028586 | Msa0146340:CDS |
| GTTGGAGGAAACCAAACGCA+AGG | 0.648076 | 1_4:+6031938 | None:intergenic |
| AAGCTCAAAGCTCCCCTAGG+TGG | 0.657354 | 1_4:-6028124 | Msa0146340:CDS |
| ATTCACGAGATACTAACAGT+TGG | 0.659550 | 1_4:-6028187 | Msa0146340:CDS |
| TAGAGCCAAACAATACGCCA+AGG | 0.659987 | 1_4:-6031232 | Msa0146340:CDS |
| AAGCGTGAAGCTAAACTCAA+GGG | 0.663061 | 1_4:-6030546 | Msa0146340:CDS |
| CCCTAATCTGAAGAGCGTCA+GGG | 0.672345 | 1_4:-6028538 | Msa0146340:CDS |
| TAACATAAGGCTCAACCCTG+TGG | 0.679817 | 1_4:+6028571 | None:intergenic |
| AGGGAATTGATCTACAAGAG+GGG | 0.717541 | 1_4:-6028519 | Msa0146340:CDS |
| AGTTGGTCCTCACTTCAGAG+AGG | 0.754549 | 1_4:-6028170 | Msa0146340:CDS |
| GAAAGAGGAAGTGAAAACGG+TGG | 0.767520 | 1_4:-6031370 | Msa0146340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTGTTGTTTTAATTAAT+GGG | - | chr1_4:6029391-6029410 | Msa0146340:intron | 10.0% |
| !!! | CATTTTTTTATCAATTAAAA+TGG | - | chr1_4:6030692-6030711 | Msa0146340:intron | 10.0% |
| !!! | TAGCAACATTTATATTATTT+TGG | - | chr1_4:6028092-6028111 | Msa0146340:CDS | 15.0% |
| !!! | AGTTTTGATTATGTAATTTT+AGG | - | chr1_4:6028612-6028631 | Msa0146340:CDS | 15.0% |
| !!! | GTATAAATTAAAAAGGTATA+TGG | + | chr1_4:6029177-6029196 | None:intergenic | 15.0% |
| !! | AAATAATAAATCAATACTGT+AGG | + | chr1_4:6029336-6029355 | None:intergenic | 15.0% |
| !!! | GTTATTGTTGTTTTAATTAA+TGG | - | chr1_4:6029390-6029409 | Msa0146340:intron | 15.0% |
| !! | AATAACAAAATATTATGCAT+TGG | + | chr1_4:6030434-6030453 | None:intergenic | 15.0% |
| !!! | CAAATAATTTTATTTAGAAG+AGG | + | chr1_4:6030457-6030476 | None:intergenic | 15.0% |
| !!! | AACTTATTTTATGTTACATA+CGG | - | chr1_4:6030555-6030574 | Msa0146340:CDS | 15.0% |
| !!! | TACTTCTTTTTATTTTCTTA+CGG | - | chr1_4:6030744-6030763 | Msa0146340:intron | 15.0% |
| !!! | TAATATTTTAAAGCAAAACT+GGG | + | chr1_4:6031847-6031866 | None:intergenic | 15.0% |
| !!! | ATAATATTTTAAAGCAAAAC+TGG | + | chr1_4:6031848-6031867 | None:intergenic | 15.0% |
| !! | TTAATTTCTTCATTGTTTGA+AGG | - | chr1_4:6028395-6028414 | Msa0146340:intron | 20.0% |
| !!! | TTAAAAAGGTATATGGATTA+AGG | + | chr1_4:6029170-6029189 | None:intergenic | 20.0% |
| !!! | GTAACTTTTTAGTGTATAAT+TGG | - | chr1_4:6029573-6029592 | Msa0146340:intron | 20.0% |
| !!! | GATCTTTAATATTTAGTTCA+TGG | - | chr1_4:6031895-6031914 | Msa0146340:CDS | 20.0% |
| ! | AAAAGTAACAGATGTATGAA+TGG | + | chr1_4:6028289-6028308 | None:intergenic | 25.0% |
| ! | ATATTGGAGAACTTTGTAAA+TGG | - | chr1_4:6028747-6028766 | Msa0146340:intron | 25.0% |
| !!! | TAAGTTTTGTGATGCTATTT+GGG | + | chr1_4:6028991-6029010 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGATGCTATT+TGG | + | chr1_4:6028992-6029011 | None:intergenic | 25.0% |
| ! | TGAAAACAACTTATGAACAA+TGG | - | chr1_4:6029061-6029080 | Msa0146340:intron | 25.0% |
| !! | ATATGGATTAAGGAATTGTT+TGG | + | chr1_4:6029160-6029179 | None:intergenic | 25.0% |
| !! | ATAGTATACTAGTTATTTCC+AGG | - | chr1_4:6029357-6029376 | Msa0146340:intron | 25.0% |
| !!! | TAATTTTAGTATCAACGCTA+TGG | - | chr1_4:6029424-6029443 | Msa0146340:intron | 25.0% |
| !!! | CATTCAGATTGTTTTTTGTT+TGG | - | chr1_4:6029495-6029514 | Msa0146340:intron | 25.0% |
| ! | GAAAAACTATACATTGTCAT+AGG | + | chr1_4:6029851-6029870 | None:intergenic | 25.0% |
| ! | AGTCTTTCTATGTTTAATAC+AGG | - | chr1_4:6029921-6029940 | Msa0146340:intron | 25.0% |
| ! | GTCTTTCTATGTTTAATACA+GGG | - | chr1_4:6029922-6029941 | Msa0146340:intron | 25.0% |
| ! | TCTTTCTATGTTTAATACAG+GGG | - | chr1_4:6029923-6029942 | Msa0146340:intron | 25.0% |
| ! | TCTTTCTATGCTTAATACAA+GGG | + | chr1_4:6029988-6030007 | None:intergenic | 25.0% |
| ! | AACTTACAACTAAAACTCTT+AGG | - | chr1_4:6030217-6030236 | Msa0146340:intron | 25.0% |
| ! | ACTTACAACTAAAACTCTTA+GGG | - | chr1_4:6030218-6030237 | Msa0146340:intron | 25.0% |
| ! | AAACTAAACAAGTATGAAAG+AGG | - | chr1_4:6030810-6030829 | Msa0146340:intron | 25.0% |
| ! | TATGAAAGAGGAAAAAGAAA+AGG | - | chr1_4:6030822-6030841 | Msa0146340:intron | 25.0% |
| ! | ATGAAAGAGGAAAAAGAAAA+GGG | - | chr1_4:6030823-6030842 | Msa0146340:intron | 25.0% |
| ! | AATGTAACATTTCTTCAGTT+TGG | + | chr1_4:6030971-6030990 | None:intergenic | 25.0% |
| ! | TCAAAAGAAATGGAAGAATA+AGG | + | chr1_4:6031146-6031165 | None:intergenic | 25.0% |
| ! | GAAGAAAAGAAATCATTATG+TGG | - | chr1_4:6031698-6031717 | Msa0146340:intron | 25.0% |
| ! | AAAAGAAATCATTATGTGGA+AGG | - | chr1_4:6031702-6031721 | Msa0146340:intron | 25.0% |
| ! | TTGTGTGAGATTAATTATCA+AGG | - | chr1_4:6031799-6031818 | Msa0146340:CDS | 25.0% |
| !!! | CTTATTTTAACATATGCGAA+CGG | - | chr1_4:6031873-6031892 | Msa0146340:CDS | 25.0% |
| ! | TTTATGGACTGACATGTTAT+GGG | + | chr1_4:6028130-6028149 | None:intergenic | 30.0% |
| ! | TGAAATATCAATGGGCTTTA+TGG | + | chr1_4:6028146-6028165 | None:intergenic | 30.0% |
| TAAAGCCCATTGATATTTCA+AGG | - | chr1_4:6028146-6028165 | Msa0146340:CDS | 30.0% | |
| AAAGCCCATTGATATTTCAA+GGG | - | chr1_4:6028147-6028166 | Msa0146340:CDS | 30.0% | |
| AGAAAATGAAACTAGGGTTT+GGG | + | chr1_4:6028212-6028231 | None:intergenic | 30.0% | |
| AAGAAAATGAAACTAGGGTT+TGG | + | chr1_4:6028213-6028232 | None:intergenic | 30.0% | |
| TGGAGAAGAAAATGAAACTA+GGG | + | chr1_4:6028218-6028237 | None:intergenic | 30.0% | |
| ATGGAGAAGAAAATGAAACT+AGG | + | chr1_4:6028219-6028238 | None:intergenic | 30.0% | |
| !!! | ATGTAATTTTAGGCCTTGTT+TGG | - | chr1_4:6028622-6028641 | Msa0146340:CDS | 30.0% |
| ATAAGCTGTTAATCCAAACA+AGG | + | chr1_4:6028638-6028657 | None:intergenic | 30.0% | |
| TTAGTACAAGCTAGCTATAT+TGG | - | chr1_4:6028731-6028750 | Msa0146340:intron | 30.0% | |
| !! | AGTTGTTTTCAGCTTAAGTA+GGG | + | chr1_4:6029052-6029071 | None:intergenic | 30.0% |
| !! | AAGTTGTTTTCAGCTTAAGT+AGG | + | chr1_4:6029053-6029072 | None:intergenic | 30.0% |
| GATTAAGGAATTGTTTGGAT+TGG | + | chr1_4:6029155-6029174 | None:intergenic | 30.0% | |
| !! | TTTAATTTGTGTGCAGCAAA+AGG | - | chr1_4:6029210-6029229 | Msa0146340:intron | 30.0% |
| CTAAGCTCTTGTTCATTATT+AGG | - | chr1_4:6029293-6029312 | Msa0146340:intron | 30.0% | |
| TTGTTCATTATTAGGATCAG+AGG | - | chr1_4:6029301-6029320 | Msa0146340:intron | 30.0% | |
| TGTTCATTATTAGGATCAGA+GGG | - | chr1_4:6029302-6029321 | Msa0146340:intron | 30.0% | |
| ! | GCAAAATCTTCCTTGATTTT+GGG | + | chr1_4:6029451-6029470 | None:intergenic | 30.0% |
| ! | TGCAAAATCTTCCTTGATTT+TGG | + | chr1_4:6029452-6029471 | None:intergenic | 30.0% |
| !!! | TGTGATACACTTGTGTTTTT+TGG | - | chr1_4:6029671-6029690 | Msa0146340:intron | 30.0% |
| TTTGTTCAGTGAGTTATTCT+AGG | - | chr1_4:6029737-6029756 | Msa0146340:intron | 30.0% | |
| GTCTTTCTATGCTTAATACA+AGG | + | chr1_4:6029989-6030008 | None:intergenic | 30.0% | |
| AGTTGTGATGTTATCAAACA+TGG | + | chr1_4:6030201-6030220 | None:intergenic | 30.0% | |
| GAAAATGAGAACAGAGAAAT+AGG | - | chr1_4:6030259-6030278 | Msa0146340:intron | 30.0% | |
| TGAGAAATAGAGTAGATTTG+AGG | - | chr1_4:6030312-6030331 | Msa0146340:intron | 30.0% | |
| !!! | ATTGGTCGTTTTTCAATTGA+AGG | + | chr1_4:6030416-6030435 | None:intergenic | 30.0% |
| GAAAAAGAAAAGGGTAATTG+TGG | - | chr1_4:6030832-6030851 | Msa0146340:intron | 30.0% | |
| ATCAAAACCTCTGCTATAAT+GGG | + | chr1_4:6031077-6031096 | None:intergenic | 30.0% | |
| ATTCTTCAACACAGTATTAG+AGG | + | chr1_4:6031102-6031121 | None:intergenic | 30.0% | |
| !! | TTTTGACTGCAGATCTTTAA+TGG | - | chr1_4:6031160-6031179 | Msa0146340:intron | 30.0% |
| TACAACATTTAGTGATTGCA+GGG | + | chr1_4:6031376-6031395 | None:intergenic | 30.0% | |
| CAATCACTAAATGTTGTAGT+CGG | - | chr1_4:6031378-6031397 | Msa0146340:CDS | 30.0% | |
| !!! | CAGAAGGATGAATTAGTTTT+TGG | - | chr1_4:6031767-6031786 | Msa0146340:intron | 30.0% |
| TTAAAGCAAAACTGGGATTA+AGG | + | chr1_4:6031840-6031859 | None:intergenic | 30.0% | |
| GTCAAGGATGAATAAGTAAA+AGG | + | chr1_4:6031950-6031969 | None:intergenic | 30.0% | |
| ! | AAATTGACAACACAAGTTGG+AGG | + | chr1_4:6027873-6027892 | None:intergenic | 35.0% |
| AGCAAATTGACAACACAAGT+TGG | + | chr1_4:6027876-6027895 | None:intergenic | 35.0% | |
| AACTCGTGAAATCCAAGAAA+CGG | - | chr1_4:6027970-6027989 | Msa0146340:three_prime_UTR | 35.0% | |
| ATCTCCCAAACGTTATGTTT+AGG | - | chr1_4:6028021-6028040 | Msa0146340:exon | 35.0% | |
| TCTCCCAAACGTTATGTTTA+GGG | - | chr1_4:6028022-6028041 | Msa0146340:exon | 35.0% | |
| GTTATGTTTAGGGGCAAAAA+CGG | - | chr1_4:6028032-6028051 | Msa0146340:exon | 35.0% | |
| ! | CTTTATGGACTGACATGTTA+TGG | + | chr1_4:6028131-6028150 | None:intergenic | 35.0% |
| TCTGCCCTTGAAATATCAAT+GGG | + | chr1_4:6028154-6028173 | None:intergenic | 35.0% | |
| AGTAACAGATGTATGAATGG+AGG | + | chr1_4:6028286-6028305 | None:intergenic | 35.0% | |
| ACAAAACCCTAAATCACGTT+GGG | + | chr1_4:6028354-6028373 | None:intergenic | 35.0% | |
| ! | CCTTTTCTGCTTCTTCAAAA+CGG | + | chr1_4:6028458-6028477 | None:intergenic | 35.0% |
| CTGAAACAAGGAAACTCATT+TGG | - | chr1_4:6028536-6028555 | Msa0146340:CDS | 35.0% | |
| ATATTCCTTGGCGTATTGTT+TGG | + | chr1_4:6028569-6028588 | None:intergenic | 35.0% | |
| TACCTGATCATCATATTCCT+TGG | + | chr1_4:6028581-6028600 | None:intergenic | 35.0% | |
| ! | ACTTTGTAAATGGCGTTTTG+TGG | - | chr1_4:6028757-6028776 | Msa0146340:intron | 35.0% |
| GTCAGTAGATAAGCTCAATT+AGG | - | chr1_4:6029012-6029031 | Msa0146340:intron | 35.0% | |
| TCAATTAGGCCAATCAAATC+AGG | - | chr1_4:6029026-6029045 | Msa0146340:intron | 35.0% | |
| GCTTATTTGAGCTTATCTAC+AGG | + | chr1_4:6029133-6029152 | None:intergenic | 35.0% | |
| ! | GTATACTAGTTATTTCCAGG+TGG | - | chr1_4:6029360-6029379 | Msa0146340:intron | 35.0% |
| ACAATAACAAGAAAACCACC+TGG | + | chr1_4:6029378-6029397 | None:intergenic | 35.0% | |
| AACACAAGTGTATCACAATG+AGG | + | chr1_4:6029668-6029687 | None:intergenic | 35.0% | |
| CTGAACAAACCTTTAATCAG+AGG | + | chr1_4:6029726-6029745 | None:intergenic | 35.0% | |
| TCATAGGTACACTTAACAGT+GGG | + | chr1_4:6029835-6029854 | None:intergenic | 35.0% | |
| TCAGGTGTAACTATATCTCA+AGG | + | chr1_4:6029873-6029892 | None:intergenic | 35.0% | |
| ! | AAATCACATCAAAGTGCTTC+AGG | + | chr1_4:6029891-6029910 | None:intergenic | 35.0% |
| AGCATAGAAAGACTATTCCA+AGG | - | chr1_4:6029996-6030015 | Msa0146340:intron | 35.0% | |
| GCATAGAAAGACTATTCCAA+GGG | - | chr1_4:6029997-6030016 | Msa0146340:intron | 35.0% | |
| CTATGCTTAATACAATCCCT+TGG | + | chr1_4:6030016-6030035 | None:intergenic | 35.0% | |
| ! | CTCTCTACTTGTTACTAGTT+AGG | - | chr1_4:6030171-6030190 | Msa0146340:intron | 35.0% |
| TAAAACTCTTAGGGTGTGTT+TGG | - | chr1_4:6030227-6030246 | Msa0146340:intron | 35.0% | |
| !! | AGTAGATTTGAGGTACTGTT+TGG | - | chr1_4:6030322-6030341 | Msa0146340:intron | 35.0% |
| !!! | TTTTTGAGTCTTCGCAAATC+TGG | + | chr1_4:6030898-6030917 | None:intergenic | 35.0% |
| ! | TTTGGTTCAGCAGAGAATTA+GGG | + | chr1_4:6030953-6030972 | None:intergenic | 35.0% |
| !! | TATAATGGGTCTATCAAGGA+TGG | + | chr1_4:6031063-6031082 | None:intergenic | 35.0% |
| GATCAAAACCTCTGCTATAA+TGG | + | chr1_4:6031078-6031097 | None:intergenic | 35.0% | |
| GGCTACATTGTAATATTGCA+TGG | + | chr1_4:6031125-6031144 | None:intergenic | 35.0% | |
| AGATCTGCAGTCAAAAGAAA+TGG | + | chr1_4:6031156-6031175 | None:intergenic | 35.0% | |
| ! | GTTGAGCCTTATGTTACATA+CGG | - | chr1_4:6031229-6031248 | Msa0146340:CDS | 35.0% |
| ! | TTGAGCCTTATGTTACATAC+GGG | - | chr1_4:6031230-6031249 | Msa0146340:CDS | 35.0% |
| AGACAACTCAATCATTGAAC+AGG | - | chr1_4:6031333-6031352 | Msa0146340:CDS | 35.0% | |
| TTGAACAGGTTTGTCTGATT+TGG | - | chr1_4:6031347-6031366 | Msa0146340:CDS | 35.0% | |
| CTACAACATTTAGTGATTGC+AGG | + | chr1_4:6031377-6031396 | None:intergenic | 35.0% | |
| TAGGAACCAAACAACAAAGT+CGG | + | chr1_4:6031444-6031463 | None:intergenic | 35.0% | |
| TTTGACTGACGTTATCCAAT+GGG | - | chr1_4:6031541-6031560 | Msa0146340:intron | 35.0% | |
| ATTCACGAGATACTAACAGT+TGG | - | chr1_4:6031606-6031625 | Msa0146340:CDS | 35.0% | |
| TTTCTTCTTCATACCACCTA+GGG | + | chr1_4:6031685-6031704 | None:intergenic | 35.0% | |
| ! | TTTTCTTCTTCATACCACCT+AGG | + | chr1_4:6031686-6031705 | None:intergenic | 35.0% |
| AGAAATCATTATGTGGAAGG+TGG | - | chr1_4:6031705-6031724 | Msa0146340:intron | 35.0% | |
| ! | AGAATTTTTCACTGCATTCC+AGG | + | chr1_4:6031926-6031945 | None:intergenic | 35.0% |
| AAACTGAATTGGCAAAGTCA+AGG | + | chr1_4:6031966-6031985 | None:intergenic | 35.0% | |
| !! | TTGTGTTGTCAATTTGCTGC+TGG | - | chr1_4:6027878-6027897 | Msa0146340:three_prime_UTR | 40.0% |
| ! | CATTTTGCCAACTCGATAGA+AGG | - | chr1_4:6027932-6027951 | Msa0146340:three_prime_UTR | 40.0% |
| AATGGTTCCTTCTATCGAGT+TGG | + | chr1_4:6027942-6027961 | None:intergenic | 40.0% | |
| ACTCGATAGAAGGAACCATT+CGG | - | chr1_4:6027942-6027961 | Msa0146340:three_prime_UTR | 40.0% | |
| ACTCGTGAAATCCAAGAAAC+GGG | - | chr1_4:6027971-6027990 | Msa0146340:three_prime_UTR | 40.0% | |
| AGATAGAAACCGAACAGTTC+GGG | + | chr1_4:6028005-6028024 | None:intergenic | 40.0% | |
| GAGATAGAAACCGAACAGTT+CGG | + | chr1_4:6028006-6028025 | None:intergenic | 40.0% | |
| CTCCCAAACGTTATGTTTAG+GGG | - | chr1_4:6028023-6028042 | Msa0146340:exon | 40.0% | |
| TGCCCCTAAACATAACGTTT+GGG | + | chr1_4:6028028-6028047 | None:intergenic | 40.0% | |
| TTGCCCCTAAACATAACGTT+TGG | + | chr1_4:6028029-6028048 | None:intergenic | 40.0% | |
| ! | TAGGGGCAAAAACGGTATTT+TGG | - | chr1_4:6028040-6028059 | Msa0146340:CDS | 40.0% |
| ! | AGGGGCAAAAACGGTATTTT+GGG | - | chr1_4:6028041-6028060 | Msa0146340:CDS | 40.0% |
| CTCTGCCCTTGAAATATCAA+TGG | + | chr1_4:6028155-6028174 | None:intergenic | 40.0% | |
| TTCATCCCCAACGTGATTTA+GGG | - | chr1_4:6028345-6028364 | Msa0146340:intron | 40.0% | |
| CAAAACCCTAAATCACGTTG+GGG | + | chr1_4:6028353-6028372 | None:intergenic | 40.0% | |
| CACAAAACCCTAAATCACGT+TGG | + | chr1_4:6028355-6028374 | None:intergenic | 40.0% | |
| TGTTTGAAGGATGTCGAAAG+AGG | - | chr1_4:6028408-6028427 | Msa0146340:intron | 40.0% | |
| GTCGAAAGAGGAAGTGAAAA+CGG | - | chr1_4:6028420-6028439 | Msa0146340:intron | 40.0% | |
| ! | TGCTTCTTCAAAACGGATTC+AGG | + | chr1_4:6028451-6028470 | None:intergenic | 40.0% |
| !!! | CCGTTTTGAAGAAGCAGAAA+AGG | - | chr1_4:6028455-6028474 | Msa0146340:intron | 40.0% |
| AGCAGAAAAGGAACGAAGAA+TGG | - | chr1_4:6028467-6028486 | Msa0146340:CDS | 40.0% | |
| GCAGAAAAGGAACGAAGAAT+GGG | - | chr1_4:6028468-6028487 | Msa0146340:CDS | 40.0% | |
| AGAAGAAGAGAGCTGAAACA+AGG | - | chr1_4:6028524-6028543 | Msa0146340:CDS | 40.0% | |
| CACATCAAGATAAGCACTTG+TGG | + | chr1_4:6028815-6028834 | None:intergenic | 40.0% | |
| ! | TAAGTAGGGCCTGATTTGAT+TGG | + | chr1_4:6029038-6029057 | None:intergenic | 40.0% |
| AAGCGTGAAGCTAAACTCAA+GGG | - | chr1_4:6029247-6029266 | Msa0146340:intron | 40.0% | |
| TGAACAAGAGCTTAGCTTCA+GGG | + | chr1_4:6029288-6029307 | None:intergenic | 40.0% | |
| ATGAACAAGAGCTTAGCTTC+AGG | + | chr1_4:6029289-6029308 | None:intergenic | 40.0% | |
| TGCAATGCACCTCTGATTAA+AGG | - | chr1_4:6029714-6029733 | Msa0146340:intron | 40.0% | |
| GTCATAGGTACACTTAACAG+TGG | + | chr1_4:6029836-6029855 | None:intergenic | 40.0% | |
| AGCATAGAAAGACTGTTCCA+AGG | - | chr1_4:6030029-6030048 | Msa0146340:intron | 40.0% | |
| GCATAGAAAGACTGTTCCAA+GGG | - | chr1_4:6030030-6030049 | Msa0146340:intron | 40.0% | |
| TTCGCAAATCTGGAGAGAAA+GGG | + | chr1_4:6030888-6030907 | None:intergenic | 40.0% | |
| CGAAGACTCAAAAAAGCAGT+AGG | - | chr1_4:6030904-6030923 | Msa0146340:intron | 40.0% | |
| ! | GTTTGGTTCAGCAGAGAATT+AGG | + | chr1_4:6030954-6030973 | None:intergenic | 40.0% |
| TCTAACACTGTGTTTGGTAG+AGG | + | chr1_4:6031038-6031057 | None:intergenic | 40.0% | |
| ATGGACTCTAACACTGTGTT+TGG | + | chr1_4:6031044-6031063 | None:intergenic | 40.0% | |
| !! | CTGCTATAATGGGTCTATCA+AGG | + | chr1_4:6031067-6031086 | None:intergenic | 40.0% |
| TGATAGACCCATTATAGCAG+AGG | - | chr1_4:6031067-6031086 | Msa0146340:intron | 40.0% | |
| TCAGGGAATTGATCTACAAG+AGG | - | chr1_4:6031272-6031291 | Msa0146340:CDS | 40.0% | |
| CAGGGAATTGATCTACAAGA+GGG | - | chr1_4:6031273-6031292 | Msa0146340:CDS | 40.0% | |
| AGGGAATTGATCTACAAGAG+GGG | - | chr1_4:6031274-6031293 | Msa0146340:CDS | 40.0% | |
| TCTTTACTGTCAGACCTAGA+TGG | - | chr1_4:6031404-6031423 | Msa0146340:intron | 40.0% | |
| AATGGTGATCCATTCCATCT+AGG | + | chr1_4:6031421-6031440 | None:intergenic | 40.0% | |
| !! | ACCATTCCGACTTTGTTGTT+TGG | - | chr1_4:6031435-6031454 | Msa0146340:intron | 40.0% |
| ACCAAACAACAAAGTCGGAA+TGG | + | chr1_4:6031439-6031458 | None:intergenic | 40.0% | |
| !! | CTGTTCTAGCTTGAGCAAAT+AGG | + | chr1_4:6031463-6031482 | None:intergenic | 40.0% |
| AACAGTCCAGATTCTCTGTA+TGG | - | chr1_4:6031478-6031497 | Msa0146340:intron | 40.0% | |
| ACAACACCATACAGAGAATC+TGG | + | chr1_4:6031487-6031506 | None:intergenic | 40.0% | |
| CTTTGACTGACGTTATCCAA+TGG | - | chr1_4:6031540-6031559 | Msa0146340:intron | 40.0% | |
| TTCTTCTTCATACCACCTAG+GGG | + | chr1_4:6031684-6031703 | None:intergenic | 40.0% | |
| ACATCAACGAACTCATCAGA+AGG | - | chr1_4:6031751-6031770 | Msa0146340:intron | 40.0% | |
| CATTTGCAACACCTTGCGTT+TGG | - | chr1_4:6027844-6027863 | Msa0146340:three_prime_UTR | 45.0% | |
| GGTGTACAACCATTCTACTC+CGG | - | chr1_4:6027899-6027918 | Msa0146340:three_prime_UTR | 45.0% | |
| GTGTACAACCATTCTACTCC+GGG | - | chr1_4:6027900-6027919 | Msa0146340:three_prime_UTR | 45.0% | |
| ACAAGAAACCCGGAGTAGAA+TGG | + | chr1_4:6027911-6027930 | None:intergenic | 45.0% | |
| GGCAAAATGCACAAGAAACC+CGG | + | chr1_4:6027921-6027940 | None:intergenic | 45.0% | |
| CTCGATAGAAGGAACCATTC+GGG | - | chr1_4:6027943-6027962 | Msa0146340:three_prime_UTR | 45.0% | |
| TTCACGAGTTATCTCCCGAA+TGG | + | chr1_4:6027960-6027979 | None:intergenic | 45.0% | |
| GAGATAACTCCCGAACTGTT+CGG | - | chr1_4:6027993-6028012 | Msa0146340:three_prime_UTR | 45.0% | |
| ! | GGGGCAAAAACGGTATTTTG+GGG | - | chr1_4:6028042-6028061 | Msa0146340:CDS | 45.0% |
| !! | GGGCAAAAACGGTATTTTGG+GGG | - | chr1_4:6028043-6028062 | Msa0146340:CDS | 45.0% |
| TTCTCCATCTCCATCTACTG+CGG | - | chr1_4:6028231-6028250 | Msa0146340:intron | 45.0% | |
| ! | TTTTACCTTGCCGCAGTAGA+TGG | + | chr1_4:6028244-6028263 | None:intergenic | 45.0% |
| CTTCATCCCCAACGTGATTT+AGG | - | chr1_4:6028344-6028363 | Msa0146340:intron | 45.0% | |
| GAAAGAGGAAGTGAAAACGG+TGG | - | chr1_4:6028423-6028442 | Msa0146340:intron | 45.0% | |
| AAGGAACGAAGAATGGGCAT+TGG | - | chr1_4:6028474-6028493 | Msa0146340:CDS | 45.0% | |
| ATTGGTGAAGAAGCAGGAAC+AGG | - | chr1_4:6028492-6028511 | Msa0146340:CDS | 45.0% | |
| TAGAGCCAAACAATACGCCA+AGG | - | chr1_4:6028561-6028580 | Msa0146340:CDS | 45.0% | |
| CGCCAAGGAATATGATGATC+AGG | - | chr1_4:6028576-6028595 | Msa0146340:CDS | 45.0% | |
| ! | TGCAGCAAAAGGAGTTGATC+AGG | - | chr1_4:6029221-6029240 | Msa0146340:intron | 45.0% |
| GAAGCGTGAAGCTAAACTCA+AGG | - | chr1_4:6029246-6029265 | Msa0146340:intron | 45.0% | |
| ACGCTATGGACCCAAAATCA+AGG | - | chr1_4:6029438-6029457 | Msa0146340:intron | 45.0% | |
| TAGAAAGACTGTTCCAAGGG+AGG | - | chr1_4:6030033-6030052 | Msa0146340:intron | 45.0% | |
| ACTAGCAAAACAACCTCCCT+TGG | + | chr1_4:6030049-6030068 | None:intergenic | 45.0% | |
| CTTACGGCAATCATGTGTGT+TGG | - | chr1_4:6030760-6030779 | Msa0146340:intron | 45.0% | |
| CTTCGCAAATCTGGAGAGAA+AGG | + | chr1_4:6030889-6030908 | None:intergenic | 45.0% | |
| TAACATAAGGCTCAACCCTG+TGG | + | chr1_4:6031225-6031244 | None:intergenic | 45.0% | |
| GGGTACCCGTATGTAACATA+AGG | + | chr1_4:6031238-6031257 | None:intergenic | 45.0% | |
| TTGATCTACAAGAGGGGCTA+CGG | - | chr1_4:6031280-6031299 | Msa0146340:CDS | 45.0% | |
| ACTGTCAGACCTAGATGGAA+TGG | - | chr1_4:6031409-6031428 | Msa0146340:intron | 45.0% | |
| TTATCCAATGGGCAGGTTCT+TGG | - | chr1_4:6031552-6031571 | Msa0146340:intron | 45.0% | |
| TATCCAATGGGCAGGTTCTT+GGG | - | chr1_4:6031553-6031572 | Msa0146340:intron | 45.0% | |
| !! | TTGTTTGCCTCTCTGAAGTG+AGG | + | chr1_4:6031633-6031652 | None:intergenic | 45.0% |
| ! | ATTTAGTTCATGGCCTTGCC+TGG | - | chr1_4:6031905-6031924 | Msa0146340:CDS | 45.0% |
| ! | TTTTCACTGCATTCCAGGCA+AGG | + | chr1_4:6031921-6031940 | None:intergenic | 45.0% |
| !! | ATAATAATAATGAATAATTA+AGG | + | chr1_4:6028323-6028342 | None:intergenic | 5.0% |
| !! | AATAATTGTATAAATTAAAA+AGG | + | chr1_4:6029184-6029203 | None:intergenic | 5.0% |
| GTTGGAGGAAACCAAACGCA+AGG | + | chr1_4:6027858-6027877 | None:intergenic | 50.0% | |
| GGGAGTTATCTCCCGTTTCT+TGG | + | chr1_4:6027985-6028004 | None:intergenic | 50.0% | |
| !! | AAAACGGTATTTTGGGGGCC+TGG | - | chr1_4:6028048-6028067 | Msa0146340:CDS | 50.0% |
| !! | AAACGGTATTTTGGGGGCCT+GGG | - | chr1_4:6028049-6028068 | Msa0146340:CDS | 50.0% |
| GGACTGACATGTTATGGGCT+GGG | + | chr1_4:6028125-6028144 | None:intergenic | 50.0% | |
| TGGACTGACATGTTATGGGC+TGG | + | chr1_4:6028126-6028145 | None:intergenic | 50.0% | |
| !! | ATGGGCATTGGTGAAGAAGC+AGG | - | chr1_4:6028486-6028505 | Msa0146340:CDS | 50.0% |
| CGTGAAGCTAAACTCAAGGG+TGG | - | chr1_4:6029250-6029269 | Msa0146340:intron | 50.0% | |
| !! | GCAGCTTTTGCGTTTGAGAC+AGG | - | chr1_4:6029469-6029488 | Msa0146340:intron | 50.0% |
| GAAGAGAGACAGACAGACGT+GGG | + | chr1_4:6030931-6030950 | None:intergenic | 50.0% | |
| TACCGTGAACATGCTCCACA+GGG | - | chr1_4:6031207-6031226 | Msa0146340:intron | 50.0% | |
| AACCCTGTGGAGCATGTTCA+CGG | + | chr1_4:6031212-6031231 | None:intergenic | 50.0% | |
| !! | ACCCTAATCTGAAGAGCGTC+AGG | - | chr1_4:6031254-6031273 | Msa0146340:CDS | 50.0% |
| CCCTGACGCTCTTCAGATTA+GGG | + | chr1_4:6031258-6031277 | None:intergenic | 50.0% | |
| !! | CCCTAATCTGAAGAGCGTCA+GGG | - | chr1_4:6031255-6031274 | Msa0146340:CDS | 50.0% |
| TCCCTGACGCTCTTCAGATT+AGG | + | chr1_4:6031259-6031278 | None:intergenic | 50.0% | |
| ACTGACGTTATCCAATGGGC+AGG | - | chr1_4:6031545-6031564 | Msa0146340:intron | 50.0% | |
| AGTTGGTCCTCACTTCAGAG+AGG | - | chr1_4:6031623-6031642 | Msa0146340:CDS | 50.0% | |
| GAGAGGCAAACAACTTCCTG+TGG | - | chr1_4:6031640-6031659 | Msa0146340:CDS | 50.0% | |
| CTTTGAGCTTGAAAGGCCAC+AGG | + | chr1_4:6031659-6031678 | None:intergenic | 50.0% | |
| !! | AGGGGAGCTTTGAGCTTGAA+AGG | + | chr1_4:6031666-6031685 | None:intergenic | 50.0% |
| TTCAAGCTCAAAGCTCCCCT+AGG | - | chr1_4:6031666-6031685 | Msa0146340:CDS | 50.0% | |
| ! | TATGTGGAAGGTGGTGATGC+TGG | - | chr1_4:6031714-6031733 | Msa0146340:intron | 50.0% |
| ! | AAGGTGGTGATGCTGGAAAC+AGG | - | chr1_4:6031721-6031740 | Msa0146340:intron | 50.0% |
| ! | AGGTGGTGATGCTGGAAACA+GGG | - | chr1_4:6031722-6031741 | Msa0146340:intron | 50.0% |
| CTTGCCGCAGTAGATGGAGA+TGG | + | chr1_4:6028238-6028257 | None:intergenic | 55.0% | |
| CATCTCCATCTACTGCGGCA+AGG | - | chr1_4:6028236-6028255 | Msa0146340:intron | 55.0% | |
| GGAAGAGAGACAGACAGACG+TGG | + | chr1_4:6030932-6030951 | None:intergenic | 55.0% | |
| CTACCGTGAACATGCTCCAC+AGG | - | chr1_4:6031206-6031225 | Msa0146340:intron | 55.0% | |
| CTTCCCAAGAACCTGCCCAT+TGG | + | chr1_4:6031559-6031578 | None:intergenic | 55.0% | |
| AAGCTCAAAGCTCCCCTAGG+TGG | - | chr1_4:6031669-6031688 | Msa0146340:CDS | 55.0% | |
| TGACTCCCCTGTTTGCTCCC+AGG | + | chr1_4:6028069-6028088 | None:intergenic | 60.0% | |
| GGGGCTACGGCAAAGTTGAC+AGG | - | chr1_4:6031293-6031312 | Msa0146340:CDS | 60.0% | |
| GGGCAGGTTCTTGGGAAGCA+CGG | - | chr1_4:6031561-6031580 | Msa0146340:CDS | 60.0% | |
| TTGGGGGCCTGGGAGCAAAC+AGG | - | chr1_4:6028059-6028078 | Msa0146340:CDS | 65.0% | |
| TGGGGGCCTGGGAGCAAACA+GGG | - | chr1_4:6028060-6028079 | Msa0146340:CDS | 65.0% | |
| GGGGGCCTGGGAGCAAACAG+GGG | - | chr1_4:6028061-6028080 | Msa0146340:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_4 | gene | 6027824 | 6031991 | 6027824 | ID=Msa0146340;Name=Msa0146340 |
| chr1_4 | mRNA | 6027824 | 6031991 | 6027824 | ID=Msa0146340-mRNA-1;Parent=Msa0146340;Name=Msa0146340-mRNA-1;_AED=0.12;_eAED=0.12;_QI=0|0.83|0.71|0.85|1|1|7|209|359 |
| chr1_4 | exon | 6027824 | 6028248 | 6027824 | ID=Msa0146340-mRNA-1:exon:2647;Parent=Msa0146340-mRNA-1 |
| chr1_4 | exon | 6028461 | 6028643 | 6028461 | ID=Msa0146340-mRNA-1:exon:2646;Parent=Msa0146340-mRNA-1 |
| chr1_4 | exon | 6030325 | 6030382 | 6030325 | ID=Msa0146340-mRNA-1:exon:2645;Parent=Msa0146340-mRNA-1 |
| chr1_4 | exon | 6030492 | 6030589 | 6030492 | ID=Msa0146340-mRNA-1:exon:2644;Parent=Msa0146340-mRNA-1 |
| chr1_4 | exon | 6031218 | 6031398 | 6031218 | ID=Msa0146340-mRNA-1:exon:2643;Parent=Msa0146340-mRNA-1 |
| chr1_4 | exon | 6031558 | 6031693 | 6031558 | ID=Msa0146340-mRNA-1:exon:2642;Parent=Msa0146340-mRNA-1 |
| chr1_4 | exon | 6031784 | 6031991 | 6031784 | ID=Msa0146340-mRNA-1:exon:2641;Parent=Msa0146340-mRNA-1 |
| chr1_4 | CDS | 6031784 | 6031991 | 6031784 | ID=Msa0146340-mRNA-1:cds;Parent=Msa0146340-mRNA-1 |
| chr1_4 | CDS | 6031558 | 6031693 | 6031558 | ID=Msa0146340-mRNA-1:cds;Parent=Msa0146340-mRNA-1 |
| chr1_4 | CDS | 6031218 | 6031398 | 6031218 | ID=Msa0146340-mRNA-1:cds;Parent=Msa0146340-mRNA-1 |
| chr1_4 | CDS | 6030492 | 6030589 | 6030492 | ID=Msa0146340-mRNA-1:cds;Parent=Msa0146340-mRNA-1 |
| chr1_4 | CDS | 6030325 | 6030382 | 6030325 | ID=Msa0146340-mRNA-1:cds;Parent=Msa0146340-mRNA-1 |
| chr1_4 | CDS | 6028461 | 6028643 | 6028461 | ID=Msa0146340-mRNA-1:cds;Parent=Msa0146340-mRNA-1 |
| chr1_4 | CDS | 6028033 | 6028248 | 6028033 | ID=Msa0146340-mRNA-1:cds;Parent=Msa0146340-mRNA-1 |
| chr1_4 | three_prime_UTR | 6027824 | 6028032 | 6027824 | ID=Msa0146340-mRNA-1:three_prime_utr;Parent=Msa0146340-mRNA-1 |
| Gene Sequence |
| Protein sequence |
