AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0212360

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212360 MtrunA17_Chr2g0311631 86.525 282 13 1 1 257 1 282 3.41e-175 486
Msa0212360 MtrunA17_Chr2g0311641 94.771 153 8 0 1 153 1 153 5.22e-106 304
Msa0212360 MtrunA17_Chr2g0311621 83.761 117 19 0 1 117 1 117 8.40e-69 207
Msa0212360 MtrunA17_Chr3g0093741 38.869 283 133 6 6 257 2 275 6.82e-59 190
Msa0212360 MtrunA17_Chr3g0093751 37.809 283 136 6 6 257 2 275 2.38e-56 184
Msa0212360 MtrunA17_Chr3g0093761 38.516 283 133 6 6 257 2 274 3.73e-55 181
Msa0212360 MtrunA17_Chr8g0336781 35.294 272 126 10 21 257 62 318 3.67e-40 143
Msa0212360 MtrunA17_Chr2g0311761 33.209 268 139 7 21 257 32 290 4.76e-40 142
Msa0212360 MtrunA17_Chr2g0311831 33.835 266 139 9 21 257 32 289 8.87e-40 141
Msa0212360 MtrunA17_Chr7g0265351 35.246 244 119 6 44 257 24 258 2.51e-39 139
Msa0212360 MtrunA17_Chr1g0179801 31.769 277 141 6 21 257 26 294 9.71e-39 139
Msa0212360 MtrunA17_Chr8g0336851 34.317 271 129 10 21 257 27 282 2.28e-38 137
Msa0212360 MtrunA17_Chr8g0348081 34.572 269 131 9 21 257 27 282 3.82e-38 137
Msa0212360 MtrunA17_Chr8g0336761 36.162 271 124 10 21 257 27 282 4.66e-38 136
Msa0212360 MtrunA17_Chr2g0311611 81.690 71 13 0 187 257 1 71 9.97e-38 127
Msa0212360 MtrunA17_Chr7g0225881 33.457 269 137 8 21 257 27 285 1.37e-37 135
Msa0212360 MtrunA17_Chr8g0336631 34.444 270 131 8 21 257 27 283 3.49e-37 134
Msa0212360 MtrunA17_Chr1g0184241 32.593 270 137 9 20 257 32 288 4.11e-37 134
Msa0212360 MtrunA17_Chr8g0336861 34.926 272 127 10 21 257 27 283 1.16e-36 133
Msa0212360 MtrunA17_Chr4g0066121 33.457 269 133 11 22 257 28 283 1.33e-36 132
Msa0212360 MtrunA17_Chr2g0311921 32.180 289 142 12 8 257 3 276 4.66e-36 131
Msa0212360 MtrunA17_Chr7g0265221 29.066 289 141 8 21 257 25 301 8.24e-36 131
Msa0212360 MtrunA17_Chr1g0167951 33.457 269 133 10 21 257 19 273 1.11e-35 130
Msa0212360 MtrunA17_Chr6g0472861 30.986 284 129 8 21 257 27 290 2.07e-35 130
Msa0212360 MtrunA17_Chr8g0354261 32.593 270 139 9 21 257 32 291 2.45e-35 129
Msa0212360 MtrunA17_Chr2g0311701 31.481 270 141 11 21 257 32 290 7.95e-35 128
Msa0212360 MtrunA17_Chr1g0161041 31.985 272 134 9 21 257 59 314 1.31e-34 128
Msa0212360 MtrunA17_Chr7g0266651 30.112 269 144 7 21 257 23 279 1.33e-34 127
Msa0212360 MtrunA17_Chr8g0354241 32.593 270 139 9 21 257 32 291 1.88e-34 127
Msa0212360 MtrunA17_Chr7g0242551 31.183 279 139 9 22 257 15 283 3.40e-34 126
Msa0212360 MtrunA17_Chr3g0109041 29.851 268 152 8 22 257 10 273 8.23e-34 125
Msa0212360 MtrunA17_Chr1g0161111 31.835 267 143 8 20 257 94 350 8.88e-34 126
Msa0212360 MtrunA17_Chr1g0161081 31.835 267 143 8 20 257 35 291 1.13e-33 125
Msa0212360 MtrunA17_Chr2g0311681 32.222 270 139 11 21 257 26 284 1.45e-33 124
Msa0212360 MtrunA17_Chr8g0364471 31.439 264 147 7 21 257 32 288 1.87e-33 124
Msa0212360 MtrunA17_Chr8g0345831 31.559 263 136 9 28 257 13 264 2.64e-33 123
Msa0212360 MtrunA17_Chr2g0311861 33.725 255 134 9 21 257 28 265 4.50e-33 123
Msa0212360 MtrunA17_Chr1g0167931 34.274 248 120 9 21 256 19 235 5.11e-33 122
Msa0212360 MtrunA17_Chr3g0126741 30.996 271 146 7 20 257 21 283 7.44e-33 122
Msa0212360 MtrunA17_Chr1g0167911 31.461 267 142 11 21 257 19 274 1.32e-32 122
Msa0212360 MtrunA17_Chr4g0011311 30.112 269 144 8 21 257 32 288 2.91e-32 120
Msa0212360 MtrunA17_Chr2g0311711 29.412 289 159 11 2 257 12 288 5.80e-32 120
Msa0212360 MtrunA17_Chr7g0235951 31.313 297 146 12 3 257 8 288 6.89e-32 120
Msa0212360 MtrunA17_Chr8g0371931 32.900 231 117 5 54 253 38 261 1.83e-31 119
Msa0212360 MtrunA17_Chr1g0187811 31.522 276 140 12 21 257 144 409 1.90e-31 121
Msa0212360 MtrunA17_Chr8g0336751 30.882 272 141 9 20 257 57 315 2.32e-31 119
Msa0212360 MtrunA17_Chr3g0128001 32.955 264 120 9 32 257 14 258 3.55e-31 117
Msa0212360 MtrunA17_Chr1g0167961 33.210 271 131 12 21 256 34 289 4.40e-31 118
Msa0212360 MtrunA17_Chr2g0311691 30.855 269 144 9 21 257 26 284 8.18e-31 117
Msa0212360 MtrunA17_Chr2g0296371 32.685 257 134 8 33 257 28 277 8.82e-31 117
Msa0212360 MtrunA17_Chr4g0006371 28.374 289 143 9 22 257 14 291 3.26e-30 115
Msa0212360 MtrunA17_Chr4g0055591 29.630 270 141 9 21 257 24 277 6.67e-30 115
Msa0212360 MtrunA17_Chr1g0187821 30.137 292 160 11 3 257 4 288 7.98e-30 115
Msa0212360 MtrunA17_Chr8g0362741 29.323 266 135 7 21 257 32 273 1.97e-29 112
Msa0212360 MtrunA17_Chr7g0250511 30.515 272 144 8 20 257 12 272 5.86e-29 112
Msa0212360 MtrunA17_Chr1g0187831 29.927 274 144 12 21 257 29 291 7.50e-29 112
Msa0212360 MtrunA17_Chr4g0045441 31.496 254 111 8 55 257 26 267 7.82e-29 112
Msa0212360 MtrunA17_Chr4g0045411 30.924 249 114 8 55 257 30 266 9.36e-29 111
Msa0212360 MtrunA17_Chr3g0102041 29.004 231 126 5 54 253 38 261 1.88e-28 110
Msa0212360 MtrunA17_Chr1g0184121 30.451 266 135 7 28 257 9 260 2.54e-28 110
Msa0212360 MtrunA17_Chr3g0125201 31.197 234 118 8 55 257 3 224 4.13e-28 108
Msa0212360 MtrunA17_Chr8g0375671 27.675 271 153 8 21 257 17 278 1.33e-27 108
Msa0212360 MtrunA17_Chr5g0437181 28.727 275 146 9 22 257 14 277 1.38e-27 108
Msa0212360 MtrunA17_Chr8g0375601 29.412 272 147 10 22 257 11 273 2.44e-27 108
Msa0212360 MtrunA17_Chr8g0371921 31.878 229 122 7 54 253 38 261 2.54e-27 108
Msa0212360 MtrunA17_Chr3g0113641 27.143 280 154 9 15 257 12 278 4.63e-27 107
Msa0212360 MtrunA17_Chr1g0184111 30.451 266 135 7 28 257 9 260 5.38e-27 107
Msa0212360 MtrunA17_Chr5g0421091 30.769 273 139 11 21 257 10 268 5.49e-27 107
Msa0212360 MtrunA17_Chr1g0184161 29.231 260 145 7 28 257 10 260 8.04e-27 106
Msa0212360 MtrunA17_Chr5g0405411 32.189 233 116 8 54 253 38 261 1.02e-26 106
Msa0212360 MtrunA17_Chr5g0426891 29.259 270 148 10 21 257 3 262 1.26e-26 105
Msa0212360 MtrunA17_Chr4g0050031 30.603 232 125 5 55 257 62 286 1.65e-26 105
Msa0212360 MtrunA17_Chr5g0420901 33.088 272 133 11 21 257 11 268 2.39e-26 105
Msa0212360 MtrunA17_Chr1g0162361 31.325 249 111 9 54 257 26 259 4.26e-26 104
Msa0212360 MtrunA17_Chr1g0162351 28.000 275 145 8 30 257 44 312 5.45e-26 104
Msa0212360 MtrunA17_Chr2g0314401 28.782 271 148 10 21 257 16 275 7.31e-26 103
Msa0212360 MtrunA17_Chr6g0455481 30.000 260 132 8 33 257 19 263 8.71e-26 103
Msa0212360 MtrunA17_Chr5g0420981 28.571 273 146 7 21 257 17 276 9.55e-26 103
Msa0212360 MtrunA17_Chr1g0162321 27.636 275 146 8 30 257 44 312 1.43e-25 103
Msa0212360 MtrunA17_Chr5g0420951 29.368 269 149 7 21 257 17 276 2.79e-25 102
Msa0212360 MtrunA17_Chr5g0412671 30.258 271 136 12 27 257 9 266 3.22e-25 102
Msa0212360 MtrunA17_Chr8g0375571 28.467 274 147 11 21 257 10 271 3.34e-25 102
Msa0212360 MtrunA17_Chr1g0184151 29.545 264 139 7 28 257 10 260 3.40e-25 102
Msa0212360 MtrunA17_Chr5g0398291 26.523 279 153 7 22 257 8 277 3.63e-25 102
Msa0212360 MtrunA17_Chr7g0239121 30.996 271 140 12 22 257 16 274 3.79e-25 102
Msa0212360 MtrunA17_Chr5g0423191 29.323 266 149 10 22 257 13 269 3.96e-25 102
Msa0212360 MtrunA17_Chr5g0423221 29.630 270 146 11 21 257 36 294 7.36e-25 101
Msa0212360 MtrunA17_Chr7g0239111 31.502 273 137 12 21 257 19 277 9.60e-25 100
Msa0212360 MtrunA17_Chr5g0412651 30.741 270 136 10 27 257 9 266 1.17e-24 100
Msa0212360 MtrunA17_Chr2g0311741 33.476 233 114 9 55 257 27 248 1.25e-24 100
Msa0212360 MtrunA17_Chr7g0236011 30.556 288 160 9 3 257 8 288 2.00e-24 100
Msa0212360 MtrunA17_Chr7g0239101 32.567 261 128 11 32 257 30 277 2.39e-24 99.8
Msa0212360 MtrunA17_Chr4g0045451 29.921 254 115 8 55 257 26 267 2.62e-24 99.8
Msa0212360 MtrunA17_Chr2g0314381 28.839 267 141 11 27 257 48 301 2.88e-24 100
Msa0212360 MtrunA17_Chr1g0184101 29.502 261 144 7 28 257 9 260 3.46e-24 99.4
Msa0212360 MtrunA17_Chr7g0232161 32.353 272 134 11 22 257 25 282 3.71e-24 99.0
Msa0212360 MtrunA17_Chr8g0365241 30.112 269 146 8 21 257 22 280 4.24e-24 99.4
Msa0212360 MtrunA17_Chr3g0114871 28.511 235 127 5 54 257 41 265 6.87e-24 97.1
Msa0212360 MtrunA17_Chr5g0420941 32.000 275 132 12 21 257 10 267 7.31e-24 98.6
Msa0212360 MtrunA17_Chr5g0412681 29.487 234 121 8 55 257 33 253 9.56e-24 97.8
Msa0212360 MtrunA17_Chr2g0314391 28.044 271 150 10 21 257 35 294 1.08e-23 98.2
Msa0212360 MtrunA17_Chr2g0314371 27.682 289 138 11 27 257 23 298 1.40e-23 97.4
Msa0212360 MtrunA17_Chr8g0375701 28.322 286 144 13 15 257 9 276 1.60e-23 97.4
Msa0212360 MtrunA17_Chr7g0247991 31.716 268 141 9 21 257 32 288 3.48e-23 97.1
Msa0212360 MtrunA17_Chr5g0423201 27.881 269 152 10 21 257 12 270 3.55e-23 96.7
Msa0212360 MtrunA17_Chr5g0421011 27.037 270 152 11 21 257 12 269 3.69e-23 96.7
Msa0212360 MtrunA17_Chr5g0424201 26.383 235 132 5 54 257 43 267 4.04e-23 96.3
Msa0212360 MtrunA17_Chr5g0423251 29.344 259 138 11 32 257 23 269 8.18e-23 95.5
Msa0212360 MtrunA17_Chr8g0335411 29.831 295 153 9 3 257 8 288 1.69e-22 95.1
Msa0212360 MtrunA17_Chr2g0289341 29.958 237 117 9 54 257 3 223 1.83e-22 94.0
Msa0212360 MtrunA17_Chr5g0439011 32.627 236 112 11 54 257 4 224 2.16e-22 94.0
Msa0212360 MtrunA17_Chr1g0191201 29.771 262 126 8 34 255 40 283 2.40e-22 94.7
Msa0212360 MtrunA17_Chr4g0045431 28.571 252 121 9 55 257 26 267 2.57e-22 94.4
Msa0212360 MtrunA17_Chr8g0336831 30.180 222 120 7 20 210 26 243 2.69e-22 92.4
Msa0212360 MtrunA17_Chr4g0045471 27.798 277 138 7 32 257 3 268 3.84e-22 93.6
Msa0212360 MtrunA17_Chr3g0130391 29.496 278 137 9 24 255 32 296 4.57e-22 94.0
Msa0212360 MtrunA17_Chr7g0239821 31.868 273 134 13 22 257 29 286 5.78e-22 93.6
Msa0212360 MtrunA17_Chr4g0066991 30.040 253 145 8 21 257 32 268 3.05e-21 91.3
Msa0212360 MtrunA17_Chr2g0319491 29.719 249 135 10 38 257 15 252 4.28e-21 90.5
Msa0212360 MtrunA17_Chr6g0474391 29.304 273 126 9 31 255 41 294 5.25e-21 90.9
Msa0212360 MtrunA17_Chr3g0114861 26.119 268 155 6 22 257 6 262 5.27e-21 90.5
Msa0212360 MtrunA17_Chr8g0375681 29.902 204 98 8 87 257 15 206 1.42e-20 88.6
Msa0212360 MtrunA17_Chr5g0421101 28.519 270 148 11 21 257 12 269 1.45e-20 89.4
Msa0212360 MtrunA17_Chr2g0332191 24.686 239 128 6 55 257 52 274 1.75e-20 89.4
Msa0212360 MtrunA17_Chr4g0064781 28.326 233 126 9 55 257 50 271 2.91e-20 88.6
Msa0212360 MtrunA17_Chr3g0121141 29.915 234 121 9 54 257 3 223 5.28e-20 87.4
Msa0212360 MtrunA17_Chr5g0424211 28.992 238 122 8 55 257 42 267 6.48e-20 87.4
Msa0212360 MtrunA17_Chr7g0235981 29.588 267 116 12 21 257 18 242 2.09e-19 85.9
Msa0212360 MtrunA17_Chr8g0370711 28.085 235 128 8 55 257 52 277 2.52e-19 85.9
Msa0212360 MtrunA17_Chr8g0336801 51.429 70 27 1 188 257 12 74 3.18e-19 82.0
Msa0212360 MtrunA17_Chr1g0204181 27.562 283 145 11 15 255 25 289 4.08e-19 85.5
Msa0212360 MtrunA17_Chr7g0239071 29.902 204 102 6 85 257 29 222 6.16e-19 84.3
Msa0212360 MtrunA17_Chr5g0421041 26.296 270 152 10 21 257 12 267 6.78e-19 84.7
Msa0212360 MtrunA17_Chr3g0126761 39.669 121 60 3 139 257 45 154 1.22e-18 82.0
Msa0212360 MtrunA17_Chr7g0239091 29.084 251 142 10 31 257 134 372 1.48e-18 84.3
Msa0212360 MtrunA17_Chr3g0145181 27.727 220 120 9 69 257 66 277 7.68e-18 81.6
Msa0212360 MtrunA17_Chr1g0162191 28.996 269 133 11 30 257 20 271 9.24e-18 81.6
Msa0212360 MtrunA17_Chr3g0145201 27.727 220 120 9 69 257 701 912 1.26e-17 82.4
Msa0212360 MtrunA17_Chr8g0370721 26.809 235 131 8 55 257 52 277 1.63e-17 80.9
Msa0212360 MtrunA17_Chr7g0247741 28.099 242 129 8 49 257 4 233 1.95e-17 80.1
Msa0212360 MtrunA17_Chr4g0045461 26.087 276 142 10 32 257 3 266 2.36e-17 80.5
Msa0212360 MtrunA17_Chr3g0145171 26.695 236 130 8 55 257 52 277 3.73e-17 79.7
Msa0212360 MtrunA17_Chr8g0336791 36.364 132 75 5 20 146 26 153 4.48e-17 77.0
Msa0212360 MtrunA17_Chr8g0351101 26.966 267 135 8 33 255 33 283 1.10e-16 78.6
Msa0212360 MtrunA17_Chr3g0125421 25.191 262 138 8 34 255 23 266 6.89e-16 76.3
Msa0212360 MtrunA17_Chr1g0167921 31.613 155 74 6 105 257 33 157 7.53e-16 73.2
Msa0212360 MtrunA17_Chr4g0068891 26.609 233 131 7 55 257 20 242 2.09e-15 74.7
Msa0212360 MtrunA17_Chr8g0364171 31.707 123 74 2 138 257 11 126 3.44e-15 70.9
Msa0212360 MtrunA17_Chr8g0336871 41.837 98 42 3 158 251 6 92 5.14e-15 70.9
Msa0212360 MtrunA17_Chr7g0228631 37.383 107 50 2 4 106 1 94 5.68e-15 69.7
Msa0212360 MtrunA17_Chr3g0092531 28.936 235 122 8 55 257 6 227 8.78e-15 72.8
Msa0212360 MtrunA17_Chr5g0420721 40.541 74 36 2 185 257 105 171 1.74e-13 68.6
Msa0212360 MtrunA17_Chr6g0488511 27.897 233 127 11 55 257 3 224 1.94e-13 68.9
Msa0212360 MtrunA17_Chr8g0375581 37.333 75 39 2 180 253 18 85 6.53e-13 62.8
Msa0212360 MtrunA17_Chr1g0170631 35.849 106 50 2 164 257 13 112 9.50e-13 65.5
Msa0212360 MtrunA17_Chr5g0420881 44.444 72 32 2 187 257 1 65 1.15e-12 63.9
Msa0212360 MtrunA17_Chr1g0161101 46.032 63 27 1 188 250 407 462 4.19e-12 65.5
Msa0212360 MtrunA17_Chr2g0319521 27.612 134 86 3 124 257 2 124 5.69e-12 62.0
Msa0212360 MtrunA17_Chr1g0168001 30.882 136 81 5 21 146 19 151 1.38e-11 61.6
Msa0212360 MtrunA17_Chr4g0075471 42.029 69 32 2 190 257 32 93 2.51e-11 60.5
Msa0212360 MtrunA17_Chr8g0364161 27.273 132 90 4 21 148 32 161 6.73e-11 60.1
Msa0212360 MtrunA17_Chr4g0064771 29.940 167 75 7 97 257 6 136 9.01e-11 60.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0212360 AT3G12900.1 51.095 274 102 4 10 257 10 277 1.48e-92 277
Msa0212360 AT3G13610.1 42.606 284 126 7 2 257 8 282 6.25e-72 224
Msa0212360 AT1G55290.1 42.143 280 125 6 7 257 11 282 1.24e-70 221
Msa0212360 AT5G12270.1 36.462 277 135 9 13 257 12 279 1.38e-48 164
Msa0212360 AT5G43450.2 35.336 283 135 10 9 257 12 280 4.96e-42 145
Msa0212360 AT5G43450.1 35.336 283 135 10 9 257 12 280 1.89e-41 145
Msa0212360 AT5G43440.2 33.449 287 138 10 9 257 12 283 5.24e-40 140
Msa0212360 AT5G59540.2 34.686 271 135 10 20 257 23 284 1.79e-39 139
Msa0212360 AT5G43440.1 33.449 287 138 10 9 257 12 283 2.80e-39 140
Msa0212360 AT5G59540.1 34.317 271 136 10 20 257 23 284 2.37e-38 137
Msa0212360 AT2G30830.1 33.083 266 140 6 21 257 20 276 4.31e-38 137
Msa0212360 AT5G59530.1 33.829 269 137 8 21 257 23 282 1.71e-37 135
Msa0212360 AT1G06620.2 32.342 269 141 7 20 257 25 283 2.29e-37 133
Msa0212360 AT1G06640.2 34.317 271 137 9 20 257 24 286 3.67e-37 133
Msa0212360 AT1G04350.1 33.333 270 136 8 20 257 20 277 4.20e-37 134
Msa0212360 AT3G61400.2 33.333 297 144 10 2 257 5 288 7.40e-37 132
Msa0212360 AT1G06640.1 34.317 271 137 9 20 257 24 286 8.59e-37 134
Msa0212360 AT1G06620.1 32.342 269 141 7 20 257 25 283 1.21e-36 133
Msa0212360 AT1G06640.3 34.457 267 134 9 20 253 24 282 1.28e-36 131
Msa0212360 AT2G36690.2 32.601 273 140 6 21 257 20 284 1.78e-36 132
Msa0212360 AT2G36690.1 32.601 273 140 6 21 257 20 284 1.78e-36 132
Msa0212360 AT3G61400.1 32.997 297 145 10 2 257 5 288 1.25e-35 130
Msa0212360 AT4G10500.1 31.274 259 136 6 31 257 18 266 2.11e-35 129
Msa0212360 AT4G10490.1 30.620 258 137 7 32 257 17 264 1.74e-34 127
Msa0212360 AT1G06645.1 32.117 274 136 10 20 257 37 296 1.39e-33 125
Msa0212360 AT1G03410.2 31.970 269 145 6 20 257 18 279 2.51e-33 124
Msa0212360 AT3G55970.2 29.032 279 145 8 22 257 14 282 2.98e-33 122
Msa0212360 AT1G03410.1 32.714 269 143 9 20 257 55 316 4.42e-33 124
Msa0212360 AT1G03400.2 32.727 275 123 11 21 257 19 269 5.15e-33 124
Msa0212360 AT1G03400.1 32.472 271 129 10 21 257 19 269 7.96e-33 122
Msa0212360 AT1G06650.1 34.050 279 127 11 20 257 24 286 9.11e-33 122
Msa0212360 AT2G30840.2 30.435 276 138 9 21 257 20 280 9.16e-33 121
Msa0212360 AT2G30840.1 30.147 272 144 8 21 257 20 280 1.57e-32 122
Msa0212360 AT1G06650.2 34.296 277 129 11 20 257 24 286 1.90e-32 122
Msa0212360 AT3G55970.1 28.674 279 146 8 22 257 14 282 2.01e-32 122
Msa0212360 AT2G30840.3 30.258 271 143 8 21 256 20 279 2.44e-32 121
Msa0212360 AT1G04380.2 32.540 252 134 9 32 257 22 263 1.18e-30 115
Msa0212360 AT1G77330.1 32.218 239 111 7 55 257 3 226 4.90e-30 114
Msa0212360 AT5G05600.2 29.455 275 144 9 22 257 27 290 5.67e-30 114
Msa0212360 AT1G04380.1 32.143 252 135 9 32 257 22 263 1.31e-29 114
Msa0212360 AT3G19010.3 32.773 238 132 9 37 257 8 234 2.90e-29 112
Msa0212360 AT5G05600.1 29.091 275 145 9 22 257 27 290 5.06e-29 113
Msa0212360 AT3G51240.1 33.190 232 115 7 54 253 37 260 7.41e-29 112
Msa0212360 AT3G11180.2 29.603 277 141 11 22 257 56 319 1.59e-28 112
Msa0212360 AT3G11180.1 29.603 277 141 11 22 257 56 319 1.74e-28 112
Msa0212360 AT2G25450.1 28.253 269 149 7 21 257 20 276 1.98e-28 111
Msa0212360 AT3G19000.2 29.123 285 134 10 24 257 2 269 3.12e-28 109
Msa0212360 AT3G19010.2 30.224 268 129 8 37 257 8 264 1.36e-27 107
Msa0212360 AT3G19000.1 29.123 285 134 10 24 257 2 269 1.36e-27 108
Msa0212360 AT2G44800.1 29.963 267 143 8 25 257 19 275 1.68e-27 108
Msa0212360 AT5G24530.1 30.483 269 136 11 25 257 5 258 2.46e-27 108
Msa0212360 AT3G19010.1 29.851 268 130 8 37 257 8 264 4.07e-27 107
Msa0212360 AT3G19010.4 29.851 268 130 8 37 257 8 264 4.07e-27 107
Msa0212360 AT4G22880.1 28.315 279 149 10 22 257 7 277 4.99e-27 107
Msa0212360 AT4G22880.2 28.315 279 149 10 22 257 7 277 4.99e-27 107
Msa0212360 AT4G22880.3 28.315 279 149 10 22 257 7 277 4.99e-27 107
Msa0212360 AT1G17020.1 29.615 260 139 11 33 257 29 279 6.57e-27 107
Msa0212360 AT4G25300.1 31.915 235 119 9 55 257 52 277 8.24e-27 107
Msa0212360 AT2G38240.1 30.657 274 139 12 22 257 12 272 1.32e-26 106
Msa0212360 AT3G60290.1 29.588 267 144 7 25 257 19 275 1.19e-25 103
Msa0212360 AT5G07480.1 27.969 261 142 9 33 257 24 274 6.80e-25 101
Msa0212360 AT1G17010.1 30.932 236 124 9 53 257 52 279 1.37e-24 100
Msa0212360 AT3G21420.1 30.545 275 147 10 20 257 15 282 3.14e-24 100
Msa0212360 AT1G78550.1 29.183 257 142 11 33 257 29 277 5.44e-24 99.4
Msa0212360 AT1G05010.1 30.638 235 116 8 55 257 4 223 6.82e-24 98.6
Msa0212360 AT1G15550.1 28.452 239 120 6 54 257 56 278 1.28e-23 98.2
Msa0212360 AT4G25420.2 30.855 269 126 10 33 257 40 292 1.77e-23 97.1
Msa0212360 AT4G21200.1 27.313 227 135 5 54 257 41 260 2.68e-23 97.1
Msa0212360 AT4G16330.2 27.197 239 126 7 53 257 65 289 3.19e-23 97.4
Msa0212360 AT4G25420.1 30.370 270 122 11 33 255 40 290 6.50e-23 96.7
Msa0212360 AT4G25310.1 31.481 216 107 10 72 257 70 274 6.55e-22 93.6
Msa0212360 AT5G07200.1 28.102 274 141 10 25 255 29 289 1.04e-21 93.2
Msa0212360 AT1G62380.1 28.936 235 120 8 55 257 7 226 1.19e-21 92.4
Msa0212360 AT5G08640.2 29.185 233 123 6 56 255 41 264 2.27e-21 91.7
Msa0212360 AT5G08640.1 29.185 233 123 6 56 255 41 264 2.27e-21 91.7
Msa0212360 AT5G51810.2 29.323 266 132 9 32 257 41 290 4.21e-21 90.5
Msa0212360 AT1G60980.1 28.996 269 133 10 32 255 35 290 4.45e-21 91.7
Msa0212360 AT3G51240.2 32.955 176 82 5 107 253 8 176 8.29e-21 89.4
Msa0212360 AT1G80340.1 27.542 236 124 6 55 257 50 271 1.16e-20 90.1
Msa0212360 AT5G51810.1 29.167 264 131 9 32 255 41 288 1.58e-20 90.1
Msa0212360 AT1G12010.1 28.947 228 129 9 55 257 7 226 2.15e-20 89.0
Msa0212360 AT1G80330.1 26.984 252 122 7 48 257 42 273 6.02e-20 88.2
Msa0212360 AT1G78550.2 30.049 203 105 9 84 257 5 199 5.68e-19 84.3
Msa0212360 AT5G20400.1 26.378 254 138 10 38 257 33 271 1.58e-18 84.0
Msa0212360 AT4G25300.2 37.190 121 60 5 144 257 72 183 1.85e-17 79.7
Msa0212360 AT5G63580.2 29.661 236 119 8 55 257 19 240 2.32e-17 79.3
Msa0212360 AT5G63580.1 29.487 234 118 8 55 255 19 238 3.37e-17 79.0
Msa0212360 AT1G47990.1 28.692 237 125 9 54 257 14 239 1.10e-16 78.6
Msa0212360 AT1G44090.1 30.453 243 116 10 54 255 62 292 1.27e-16 79.0
Msa0212360 AT4G16330.1 31.387 137 73 5 133 257 56 183 1.01e-15 75.1
Msa0212360 AT5G63600.2 25.926 243 133 8 46 257 24 250 3.49e-15 74.3
Msa0212360 AT5G63600.1 24.481 241 135 6 46 255 24 248 4.68e-15 73.9
Msa0212360 AT2G19590.1 27.391 230 131 10 54 257 10 229 2.56e-14 71.6
Msa0212360 AT1G49390.1 26.275 255 135 10 39 257 34 271 3.00e-14 72.0
Msa0212360 AT1G50960.1 27.236 246 138 10 42 257 27 261 5.38e-14 70.9
Msa0212360 AT4G23340.1 25.238 210 120 7 78 257 30 232 1.99e-13 69.3
Msa0212360 AT5G20550.1 25.556 270 140 12 33 257 19 272 4.21e-13 68.6

Find 48 sgRNAs with CRISPR-Local

Find 154 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTGTGTTCCTTTGGAGTTAT+TGG 0.184201 2_1:+54460259 Msa0212360:CDS
TTTGTTGATTCTTTCATTTA+TGG 0.199358 2_1:-54460108 None:intergenic
TTGTTGATTCTTTCATTTAT+GGG 0.253546 2_1:-54460107 None:intergenic
ATGGAAAGATTATATTAATA+TGG 0.306391 2_1:+54460418 Msa0212360:CDS
CAATGTTGGTGATGCTTTAG+AGG 0.314053 2_1:+54461225 Msa0212360:CDS
ATCAAAGGCTTAGTAGATTC+AGG 0.318766 2_1:+54460053 Msa0212360:CDS
AGAATCTAATTGGTTTGAAA+AGG 0.354781 2_1:+54461008 Msa0212360:CDS
AGTGAATCATTGTGTTCCTT+TGG 0.366769 2_1:+54460250 Msa0212360:CDS
AGGTCTGGATTTGGGCATGC+TGG 0.377896 2_1:-54461049 None:intergenic
AGTAGATTCAGGTTTATTAG+AGG 0.385396 2_1:+54460064 Msa0212360:CDS
CCAACCGTAAGGTCTGGATT+TGG 0.389550 2_1:-54461058 None:intergenic
CAACCGTAAGGTCTGGATTT+GGG 0.390182 2_1:-54461057 None:intergenic
TTGAGCTTTGATAAGTCAAT+TGG 0.399141 2_1:-54460158 None:intergenic
GTGCTTCTTCAAGATGGAAT+TGG 0.417564 2_1:+54461115 Msa0212360:CDS
CAAGATAGTAAAAGTCATCT+TGG 0.426383 2_1:+54460937 Msa0212360:CDS
GAATCTAATTGGTTTGAAAA+GGG 0.445047 2_1:+54461009 Msa0212360:CDS
ATGACTAAAGCTCCAGGTAT+TGG 0.458680 2_1:-54461202 None:intergenic
GTTAGAGCAGCAGAAACTCT+TGG 0.459549 2_1:+54460215 Msa0212360:CDS
CTTCTTCAAGATGGAATTGG+TGG 0.467099 2_1:+54461118 Msa0212360:CDS
GGTCTGGATTTGGGCATGCT+GGG 0.474545 2_1:-54461048 None:intergenic
TACAACTTTATTGTAAGAGA+TGG 0.482653 2_1:+54460023 Msa0212360:CDS
GTACAATGAATTTGAAGTGT+TGG 0.486640 2_1:-54460003 None:intergenic
CTTGAAATTCCACCAATACC+TGG 0.500507 2_1:+54461190 Msa0212360:CDS
AGCTTTGATAAGTCAATTGG+TGG 0.502375 2_1:-54460155 None:intergenic
GTAGGGCGTCACTCAGATGC+AGG 0.508188 2_1:+54461082 Msa0212360:CDS
ATCACAGTGCTTCTTCAAGA+TGG 0.509919 2_1:+54461109 Msa0212360:CDS
GAAATACTAATTAGTAAGCT+AGG 0.523115 2_1:+54460959 Msa0212360:CDS
ATGCCCAAATCCAGACCTTA+CGG 0.525674 2_1:+54461054 Msa0212360:CDS
CAGACCTTACGGTTGGTGTA+GGG 0.528479 2_1:+54461065 Msa0212360:CDS
CCAGACCTTACGGTTGGTGT+AGG 0.536978 2_1:+54461064 Msa0212360:CDS
ATTGACTTATCAAAGCTCAA+TGG 0.537491 2_1:+54460161 Msa0212360:CDS
ATTGATTCCAATAACTCCAA+AGG 0.537589 2_1:-54460266 None:intergenic
ACTAAAGCTCCAGGTATTGG+TGG 0.539395 2_1:-54461199 None:intergenic
AGAGATGGCAATGGAATCAA+AGG 0.558480 2_1:+54460038 Msa0212360:CDS
AGATAGAAAATGTGTTGGAA+TGG 0.566822 2_1:+54460399 Msa0212360:CDS
CCTACACCAACCGTAAGGTC+TGG 0.575913 2_1:-54461064 None:intergenic
ACTAATTAGTAAGCTAGGAG+TGG 0.586790 2_1:+54460964 Msa0212360:CDS
GGAGCTTTAGTCATCAATGT+TGG 0.591446 2_1:+54461211 Msa0212360:CDS
GCTGAGGATGAGATTGATGT+TGG 0.599638 2_1:+54461154 Msa0212360:CDS
TCAATTGGTGGTATATCACA+TGG 0.603575 2_1:-54460143 None:intergenic
TTTATTGTAAGAGATGGCAA+TGG 0.606425 2_1:+54460029 Msa0212360:CDS
ACATTGATGACTAAAGCTCC+AGG 0.610639 2_1:-54461208 None:intergenic
TTGATGTTGGCAAAGTAGAG+TGG 0.611600 2_1:+54461167 Msa0212360:CDS
GACGCCCTACACCAACCGTA+AGG 0.611683 2_1:-54461069 None:intergenic
CCAAATCCAGACCTTACGGT+TGG 0.633845 2_1:+54461058 Msa0212360:CDS
TCCTGAGATAGAAAATGTGT+TGG 0.641760 2_1:+54460394 Msa0212360:CDS
TAGGGCGTCACTCAGATGCA+GGG 0.656324 2_1:+54461083 Msa0212360:CDS
TGGCTTATATGTCAAAGCTG+AGG 0.757930 2_1:+54461138 Msa0212360:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATTTTTTAACTAAAGTAAT+TGG - chr2_1:54460525-54460544 None:intergenic 10.0%
!!! TACTTTAGTTAAAAAATTTT+AGG + chr2_1:54460527-54460546 Msa0212360:intron 10.0%
!!! ACTTTAGTTAAAAAATTTTA+GGG + chr2_1:54460528-54460547 Msa0212360:intron 10.0%
!!! AAACAAATTTTAATTTATCA+AGG + chr2_1:54460705-54460724 Msa0212360:intron 10.0%
!! TGTTATTATTATAAAAAGAT+GGG - chr2_1:54460837-54460856 None:intergenic 10.0%
!!! TTAATTATTTCTATATTATC+AGG + chr2_1:54460882-54460901 Msa0212360:intron 10.0%
!!! TAATTATTTCTATATTATCA+GGG + chr2_1:54460883-54460902 Msa0212360:intron 10.0%
!!! AATTTTTTAACTAAAGTAAT+TGG - chr2_1:54460525-54460544 None:intergenic 10.0%
!!! TACTTTAGTTAAAAAATTTT+AGG + chr2_1:54460527-54460546 Msa0212360:intron 10.0%
!!! ACTTTAGTTAAAAAATTTTA+GGG + chr2_1:54460528-54460547 Msa0212360:intron 10.0%
!!! AAACAAATTTTAATTTATCA+AGG + chr2_1:54460705-54460724 Msa0212360:intron 10.0%
!! TGTTATTATTATAAAAAGAT+GGG - chr2_1:54460837-54460856 None:intergenic 10.0%
!!! TTAATTATTTCTATATTATC+AGG + chr2_1:54460882-54460901 Msa0212360:intron 10.0%
!!! TAATTATTTCTATATTATCA+GGG + chr2_1:54460883-54460902 Msa0212360:intron 10.0%
!! ATGGAAAGATTATATTAATA+TGG + chr2_1:54460418-54460437 Msa0212360:CDS 15.0%
!!! ACAAAAAAAATTACATGTTT+TGG - chr2_1:54460762-54460781 None:intergenic 15.0%
!! CTGTTATTATTATAAAAAGA+TGG - chr2_1:54460838-54460857 None:intergenic 15.0%
!!! CATCTTTTTATAATAATAAC+AGG + chr2_1:54460836-54460855 Msa0212360:intron 15.0%
!! ATGGAAAGATTATATTAATA+TGG + chr2_1:54460418-54460437 Msa0212360:CDS 15.0%
!!! ACAAAAAAAATTACATGTTT+TGG - chr2_1:54460762-54460781 None:intergenic 15.0%
!! CTGTTATTATTATAAAAAGA+TGG - chr2_1:54460838-54460857 None:intergenic 15.0%
!!! CATCTTTTTATAATAATAAC+AGG + chr2_1:54460836-54460855 Msa0212360:intron 15.0%
!!! TTGTTGATTCTTTCATTTAT+GGG - chr2_1:54460110-54460129 None:intergenic 20.0%
!!! TTTGTTGATTCTTTCATTTA+TGG - chr2_1:54460111-54460130 None:intergenic 20.0%
!! TATAATAATAACAGGACTTA+TGG + chr2_1:54460844-54460863 Msa0212360:intron 20.0%
!! TCAAAAATTGAGAATCTAAT+TGG + chr2_1:54460998-54461017 Msa0212360:CDS 20.0%
!!! TTGTTGATTCTTTCATTTAT+GGG - chr2_1:54460110-54460129 None:intergenic 20.0%
!!! TTTGTTGATTCTTTCATTTA+TGG - chr2_1:54460111-54460130 None:intergenic 20.0%
!! TATAATAATAACAGGACTTA+TGG + chr2_1:54460844-54460863 Msa0212360:intron 20.0%
!! TCAAAAATTGAGAATCTAAT+TGG + chr2_1:54460998-54461017 Msa0212360:CDS 20.0%
! TACAACTTTATTGTAAGAGA+TGG + chr2_1:54460023-54460042 Msa0212360:CDS 25.0%
!! AATTTTGTTGAGAAAGTAGA+TGG - chr2_1:54460499-54460518 None:intergenic 25.0%
!!! ACAGAACTGTCATTTTTTTT+AGG - chr2_1:54460602-54460621 None:intergenic 25.0%
!!! AGATGGGTTAAATAAGTTTT+TGG - chr2_1:54460821-54460840 None:intergenic 25.0%
! GAAATACTAATTAGTAAGCT+AGG + chr2_1:54460959-54460978 Msa0212360:CDS 25.0%
!!! AGAATCTAATTGGTTTGAAA+AGG + chr2_1:54461008-54461027 Msa0212360:CDS 25.0%
!!! GAATCTAATTGGTTTGAAAA+GGG + chr2_1:54461009-54461028 Msa0212360:CDS 25.0%
! TACAACTTTATTGTAAGAGA+TGG + chr2_1:54460023-54460042 Msa0212360:CDS 25.0%
!! AATTTTGTTGAGAAAGTAGA+TGG - chr2_1:54460499-54460518 None:intergenic 25.0%
!!! ACAGAACTGTCATTTTTTTT+AGG - chr2_1:54460602-54460621 None:intergenic 25.0%
!!! AGATGGGTTAAATAAGTTTT+TGG - chr2_1:54460821-54460840 None:intergenic 25.0%
! GAAATACTAATTAGTAAGCT+AGG + chr2_1:54460959-54460978 Msa0212360:CDS 25.0%
!!! AGAATCTAATTGGTTTGAAA+AGG + chr2_1:54461008-54461027 Msa0212360:CDS 25.0%
!!! GAATCTAATTGGTTTGAAAA+GGG + chr2_1:54461009-54461028 Msa0212360:CDS 25.0%
! GTACAATGAATTTGAAGTGT+TGG - chr2_1:54460006-54460025 None:intergenic 30.0%
TTTATTGTAAGAGATGGCAA+TGG + chr2_1:54460029-54460048 Msa0212360:CDS 30.0%
! AGTAGATTCAGGTTTATTAG+AGG + chr2_1:54460064-54460083 Msa0212360:CDS 30.0%
!! ATGGGTTGTATGTACATTTT+TGG - chr2_1:54460092-54460111 None:intergenic 30.0%
! TTGAGCTTTGATAAGTCAAT+TGG - chr2_1:54460161-54460180 None:intergenic 30.0%
! ATTGACTTATCAAAGCTCAA+TGG + chr2_1:54460161-54460180 Msa0212360:CDS 30.0%
TGGAAAAGAACATGAAAAAG+TGG + chr2_1:54460181-54460200 Msa0212360:CDS 30.0%
! ATTGATTCCAATAACTCCAA+AGG - chr2_1:54460269-54460288 None:intergenic 30.0%
!!! TAAACAACTTTTTTCTCAGG+TGG - chr2_1:54460323-54460342 None:intergenic 30.0%
! AACTTGTACTCACATTTTGT+CGG - chr2_1:54460346-54460365 None:intergenic 30.0%
AGATAGAAAATGTGTTGGAA+TGG + chr2_1:54460399-54460418 Msa0212360:CDS 30.0%
ATGAAGATGCTCTTCAATAT+TGG + chr2_1:54460453-54460472 Msa0212360:intron 30.0%
TTTAGTCCCTGTAAATATAG+CGG + chr2_1:54460562-54460581 Msa0212360:intron 30.0%
ACAGTTCTGTAAAACTAATG+TGG + chr2_1:54460612-54460631 Msa0212360:intron 30.0%
! CAAGATGACTTTTACTATCT+TGG - chr2_1:54460939-54460958 None:intergenic 30.0%
CAAGATAGTAAAAGTCATCT+TGG + chr2_1:54460937-54460956 Msa0212360:CDS 30.0%
! GTACAATGAATTTGAAGTGT+TGG - chr2_1:54460006-54460025 None:intergenic 30.0%
TTTATTGTAAGAGATGGCAA+TGG + chr2_1:54460029-54460048 Msa0212360:CDS 30.0%
! AGTAGATTCAGGTTTATTAG+AGG + chr2_1:54460064-54460083 Msa0212360:CDS 30.0%
!! ATGGGTTGTATGTACATTTT+TGG - chr2_1:54460092-54460111 None:intergenic 30.0%
! TTGAGCTTTGATAAGTCAAT+TGG - chr2_1:54460161-54460180 None:intergenic 30.0%
! ATTGACTTATCAAAGCTCAA+TGG + chr2_1:54460161-54460180 Msa0212360:CDS 30.0%
TGGAAAAGAACATGAAAAAG+TGG + chr2_1:54460181-54460200 Msa0212360:CDS 30.0%
! ATTGATTCCAATAACTCCAA+AGG - chr2_1:54460269-54460288 None:intergenic 30.0%
!!! TAAACAACTTTTTTCTCAGG+TGG - chr2_1:54460323-54460342 None:intergenic 30.0%
! AACTTGTACTCACATTTTGT+CGG - chr2_1:54460346-54460365 None:intergenic 30.0%
AGATAGAAAATGTGTTGGAA+TGG + chr2_1:54460399-54460418 Msa0212360:CDS 30.0%
ATGAAGATGCTCTTCAATAT+TGG + chr2_1:54460453-54460472 Msa0212360:intron 30.0%
TTTAGTCCCTGTAAATATAG+CGG + chr2_1:54460562-54460581 Msa0212360:intron 30.0%
ACAGTTCTGTAAAACTAATG+TGG + chr2_1:54460612-54460631 Msa0212360:intron 30.0%
! CAAGATGACTTTTACTATCT+TGG - chr2_1:54460939-54460958 None:intergenic 30.0%
CAAGATAGTAAAAGTCATCT+TGG + chr2_1:54460937-54460956 Msa0212360:CDS 30.0%
ATCAAAGGCTTAGTAGATTC+AGG + chr2_1:54460053-54460072 Msa0212360:CDS 35.0%
! TCAATTGGTGGTATATCACA+TGG - chr2_1:54460146-54460165 None:intergenic 35.0%
! AGCTTTGATAAGTCAATTGG+TGG - chr2_1:54460158-54460177 None:intergenic 35.0%
AGTGAATCATTGTGTTCCTT+TGG + chr2_1:54460250-54460269 Msa0212360:CDS 35.0%
!! TTGTGTTCCTTTGGAGTTAT+TGG + chr2_1:54460259-54460278 Msa0212360:CDS 35.0%
!!! CGGTAAACAACTTTTTTCTC+AGG - chr2_1:54460326-54460345 None:intergenic 35.0%
TCCTGAGATAGAAAATGTGT+TGG + chr2_1:54460394-54460413 Msa0212360:CDS 35.0%
! TCCAACACATTTTCTATCTC+AGG - chr2_1:54460398-54460417 None:intergenic 35.0%
CGAAATCCGCTATATTTACA+GGG - chr2_1:54460571-54460590 None:intergenic 35.0%
ACGAAATCCGCTATATTTAC+AGG - chr2_1:54460572-54460591 None:intergenic 35.0%
GTTCTGTAAAACTAATGTGG+AGG + chr2_1:54460615-54460634 Msa0212360:intron 35.0%
ACTAATTAGTAAGCTAGGAG+TGG + chr2_1:54460964-54460983 Msa0212360:CDS 35.0%
ATCAAAGGCTTAGTAGATTC+AGG + chr2_1:54460053-54460072 Msa0212360:CDS 35.0%
! TCAATTGGTGGTATATCACA+TGG - chr2_1:54460146-54460165 None:intergenic 35.0%
! AGCTTTGATAAGTCAATTGG+TGG - chr2_1:54460158-54460177 None:intergenic 35.0%
AGTGAATCATTGTGTTCCTT+TGG + chr2_1:54460250-54460269 Msa0212360:CDS 35.0%
!! TTGTGTTCCTTTGGAGTTAT+TGG + chr2_1:54460259-54460278 Msa0212360:CDS 35.0%
!!! CGGTAAACAACTTTTTTCTC+AGG - chr2_1:54460326-54460345 None:intergenic 35.0%
TCCTGAGATAGAAAATGTGT+TGG + chr2_1:54460394-54460413 Msa0212360:CDS 35.0%
! TCCAACACATTTTCTATCTC+AGG - chr2_1:54460398-54460417 None:intergenic 35.0%
CGAAATCCGCTATATTTACA+GGG - chr2_1:54460571-54460590 None:intergenic 35.0%
ACGAAATCCGCTATATTTAC+AGG - chr2_1:54460572-54460591 None:intergenic 35.0%
GTTCTGTAAAACTAATGTGG+AGG + chr2_1:54460615-54460634 Msa0212360:intron 35.0%
ACTAATTAGTAAGCTAGGAG+TGG + chr2_1:54460964-54460983 Msa0212360:CDS 35.0%
AGAGATGGCAATGGAATCAA+AGG + chr2_1:54460038-54460057 Msa0212360:CDS 40.0%
TGGACTTACTTGCACTCATT+AGG - chr2_1:54460479-54460498 None:intergenic 40.0%
ATCACAGTGCTTCTTCAAGA+TGG + chr2_1:54461109-54461128 Msa0212360:CDS 40.0%
GTGCTTCTTCAAGATGGAAT+TGG + chr2_1:54461115-54461134 Msa0212360:CDS 40.0%
CTTCTTCAAGATGGAATTGG+TGG + chr2_1:54461118-54461137 Msa0212360:CDS 40.0%
TGGCTTATATGTCAAAGCTG+AGG + chr2_1:54461138-54461157 Msa0212360:CDS 40.0%
TTGATGTTGGCAAAGTAGAG+TGG + chr2_1:54461167-54461186 Msa0212360:CDS 40.0%
CTTGAAATTCCACCAATACC+TGG + chr2_1:54461190-54461209 Msa0212360:CDS 40.0%
ATGACTAAAGCTCCAGGTAT+TGG - chr2_1:54461205-54461224 None:intergenic 40.0%
! ACATTGATGACTAAAGCTCC+AGG - chr2_1:54461211-54461230 None:intergenic 40.0%
! GGAGCTTTAGTCATCAATGT+TGG + chr2_1:54461211-54461230 Msa0212360:CDS 40.0%
!! CAATGTTGGTGATGCTTTAG+AGG + chr2_1:54461225-54461244 Msa0212360:CDS 40.0%
AGAGATGGCAATGGAATCAA+AGG + chr2_1:54460038-54460057 Msa0212360:CDS 40.0%
TGGACTTACTTGCACTCATT+AGG - chr2_1:54460479-54460498 None:intergenic 40.0%
ATCACAGTGCTTCTTCAAGA+TGG + chr2_1:54461109-54461128 Msa0212360:CDS 40.0%
GTGCTTCTTCAAGATGGAAT+TGG + chr2_1:54461115-54461134 Msa0212360:CDS 40.0%
CTTCTTCAAGATGGAATTGG+TGG + chr2_1:54461118-54461137 Msa0212360:CDS 40.0%
TGGCTTATATGTCAAAGCTG+AGG + chr2_1:54461138-54461157 Msa0212360:CDS 40.0%
TTGATGTTGGCAAAGTAGAG+TGG + chr2_1:54461167-54461186 Msa0212360:CDS 40.0%
CTTGAAATTCCACCAATACC+TGG + chr2_1:54461190-54461209 Msa0212360:CDS 40.0%
ATGACTAAAGCTCCAGGTAT+TGG - chr2_1:54461205-54461224 None:intergenic 40.0%
! ACATTGATGACTAAAGCTCC+AGG - chr2_1:54461211-54461230 None:intergenic 40.0%
! GGAGCTTTAGTCATCAATGT+TGG + chr2_1:54461211-54461230 Msa0212360:CDS 40.0%
!! CAATGTTGGTGATGCTTTAG+AGG + chr2_1:54461225-54461244 Msa0212360:CDS 40.0%
GTTAGAGCAGCAGAAACTCT+TGG + chr2_1:54460215-54460234 Msa0212360:CDS 45.0%
ATGCCCAAATCCAGACCTTA+CGG + chr2_1:54461054-54461073 Msa0212360:CDS 45.0%
CAACCGTAAGGTCTGGATTT+GGG - chr2_1:54461060-54461079 None:intergenic 45.0%
GCTGAGGATGAGATTGATGT+TGG + chr2_1:54461154-54461173 Msa0212360:CDS 45.0%
!! ACTAAAGCTCCAGGTATTGG+TGG - chr2_1:54461202-54461221 None:intergenic 45.0%
GTTAGAGCAGCAGAAACTCT+TGG + chr2_1:54460215-54460234 Msa0212360:CDS 45.0%
ATGCCCAAATCCAGACCTTA+CGG + chr2_1:54461054-54461073 Msa0212360:CDS 45.0%
CAACCGTAAGGTCTGGATTT+GGG - chr2_1:54461060-54461079 None:intergenic 45.0%
GCTGAGGATGAGATTGATGT+TGG + chr2_1:54461154-54461173 Msa0212360:CDS 45.0%
!! ACTAAAGCTCCAGGTATTGG+TGG - chr2_1:54461202-54461221 None:intergenic 45.0%
CCAACCGTAAGGTCTGGATT+TGG - chr2_1:54461061-54461080 None:intergenic 50.0%
CCAAATCCAGACCTTACGGT+TGG + chr2_1:54461058-54461077 Msa0212360:CDS 50.0%
! CAGACCTTACGGTTGGTGTA+GGG + chr2_1:54461065-54461084 Msa0212360:CDS 50.0%
CCAACCGTAAGGTCTGGATT+TGG - chr2_1:54461061-54461080 None:intergenic 50.0%
CCAAATCCAGACCTTACGGT+TGG + chr2_1:54461058-54461077 Msa0212360:CDS 50.0%
! CAGACCTTACGGTTGGTGTA+GGG + chr2_1:54461065-54461084 Msa0212360:CDS 50.0%
GGTCTGGATTTGGGCATGCT+GGG - chr2_1:54461051-54461070 None:intergenic 55.0%
AGGTCTGGATTTGGGCATGC+TGG - chr2_1:54461052-54461071 None:intergenic 55.0%
CCTACACCAACCGTAAGGTC+TGG - chr2_1:54461067-54461086 None:intergenic 55.0%
! CCAGACCTTACGGTTGGTGT+AGG + chr2_1:54461064-54461083 Msa0212360:CDS 55.0%
! TAGGGCGTCACTCAGATGCA+GGG + chr2_1:54461083-54461102 Msa0212360:CDS 55.0%
GGTCTGGATTTGGGCATGCT+GGG - chr2_1:54461051-54461070 None:intergenic 55.0%
AGGTCTGGATTTGGGCATGC+TGG - chr2_1:54461052-54461071 None:intergenic 55.0%
CCTACACCAACCGTAAGGTC+TGG - chr2_1:54461067-54461086 None:intergenic 55.0%
! CCAGACCTTACGGTTGGTGT+AGG + chr2_1:54461064-54461083 Msa0212360:CDS 55.0%
! TAGGGCGTCACTCAGATGCA+GGG + chr2_1:54461083-54461102 Msa0212360:CDS 55.0%
GACGCCCTACACCAACCGTA+AGG - chr2_1:54461072-54461091 None:intergenic 60.0%
! GTAGGGCGTCACTCAGATGC+AGG + chr2_1:54461082-54461101 Msa0212360:CDS 60.0%
GACGCCCTACACCAACCGTA+AGG - chr2_1:54461072-54461091 None:intergenic 60.0%
! GTAGGGCGTCACTCAGATGC+AGG + chr2_1:54461082-54461101 Msa0212360:CDS 60.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 54459990 54461252 54459990 ID=Msa0212360;Name=Msa0212360
chr2_1 mRNA 54459990 54461252 54459990 ID=Msa0212360-mRNA-1;Parent=Msa0212360;Name=Msa0212360-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|1|2|0|257
chr2_1 exon 54459990 54460439 54459990 ID=Msa0212360-mRNA-1:exon:15078;Parent=Msa0212360-mRNA-1
chr2_1 exon 54460929 54461252 54460929 ID=Msa0212360-mRNA-1:exon:15079;Parent=Msa0212360-mRNA-1
chr2_1 CDS 54459990 54460439 54459990 ID=Msa0212360-mRNA-1:cds;Parent=Msa0212360-mRNA-1
chr2_1 CDS 54460929 54461252 54460929 ID=Msa0212360-mRNA-1:cds;Parent=Msa0212360-mRNA-1
Gene Sequence

>Msa0212360

ATGGCTCAAATTTCCAACACTTCAAATTCATTGTACAACTTTATTGTAAGAGATGGCAATGGAATCAAAGGCTTAGTAGATTCAGGTTTATTAGAGGTTCCAAAAATGTACATACAACCCATAAATGAAAGAATCAACAAACTAGACTCAAAACCATGTGATATACCACCAATTGACTTATCAAAGCTCAATGGAAAAGAACATGAAAAAGTGGTGAATGAGATTGTTAGAGCAGCAGAAACTCTTGGATTCTTTCAAGTAGTGAATCATTGTGTTCCTTTGGAGTTATTGGAATCAATTAAAGATTCAACACATGCATTTTTCAATATGCCACCTGAGAAAAAAGTTGTTTACCGACAAAATGTGAGTACAAGTTTAAAGATGAGATATCAAACTAGTTTTGCTCCTGAGATAGAAAATGTGTTGGAATGGAAAGATTATATTAATATGTTATCATCCAAGATAGTAAAAGTCATCTTGGAAATACTAATTAGTAAGCTAGGAGTGGAATTAGATGACTCAAAAATTGAGAATCTAATTGGTTTGAAAAGGGTTAACATGAACTACTACCCAGCATGCCCAAATCCAGACCTTACGGTTGGTGTAGGGCGTCACTCAGATGCAGGGACTATCACAGTGCTTCTTCAAGATGGAATTGGTGGCTTATATGTCAAAGCTGAGGATGAGATTGATGTTGGCAAAGTAGAGTGGCTTGAAATTCCACCAATACCTGGAGCTTTAGTCATCAATGTTGGTGATGCTTTAGAGGTTTGA
Protein sequence

>Msa0212360

MAQISNTSNSLYNFIVRDGNGIKGLVDSGLLEVPKMYIQPINERINKLDSKPCDIPPIDLSKLNGKEHEKVVNEIVRAAETLGFFQVVNHCVPLELLESIKDSTHAFFNMPPEKKVVYRQNVSTSLKMRYQTSFAPEIENVLEWKDYINMLSSKIVKVILEILISKLGVELDDSKIENLIGLKRVNMNYYPACPNPDLTVGVGRHSDAGTITVLLQDGIGGLYVKAEDEIDVGKVEWLEIPPIPGALVINVGDALEV*