Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669190 | XP_003604820.1 | 96.020 | 201 | 8 | 0 | 1 | 201 | 1 | 201 | 2.53e-135 | 387 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669190 | sp|Q9SR77|HBPL1_ARATH | 36.683 | 199 | 110 | 9 | 11 | 201 | 115 | 305 | 3.03e-18 | 84.0 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669190 | G7JRA4 | 96.020 | 201 | 8 | 0 | 1 | 201 | 1 | 201 | 1.21e-135 | 387 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0000590 | Msa0669190 | 0.800637 | 1.312427e-48 | -8.615850e-47 |
| Msa0008840 | Msa0669190 | 0.814973 | 1.172778e-51 | -8.615850e-47 |
| Msa0015460 | Msa0669190 | 0.825579 | 4.341662e-54 | -8.615850e-47 |
| Msa0017320 | Msa0669190 | 0.820302 | 7.370006e-53 | -8.615850e-47 |
| Msa0036370 | Msa0669190 | 0.818306 | 2.100264e-52 | -8.615850e-47 |
| Msa0038870 | Msa0669190 | 0.810073 | 1.381799e-50 | -8.615850e-47 |
| Msa0043730 | Msa0669190 | 0.804020 | 2.639960e-49 | -8.615850e-47 |
| Msa0055100 | Msa0669190 | 0.804681 | 1.921852e-49 | -8.615850e-47 |
| Msa0057750 | Msa0669190 | 0.803551 | 3.303380e-49 | -8.615850e-47 |
| Msa0065950 | Msa0669190 | 0.800077 | 1.707130e-48 | -8.615850e-47 |
| Msa0084430 | Msa0669190 | 0.805657 | 1.200983e-49 | -8.615850e-47 |
| Msa0090390 | Msa0669190 | 0.826127 | 3.217153e-54 | -8.615850e-47 |
| Msa0092170 | Msa0669190 | 0.805653 | 1.203303e-49 | -8.615850e-47 |
| Msa0095010 | Msa0669190 | 0.807767 | 4.302840e-50 | -8.615850e-47 |
| Msa0103070 | Msa0669190 | 0.802733 | 4.875806e-49 | -8.615850e-47 |
| Msa0109590 | Msa0669190 | 0.804429 | 2.169382e-49 | -8.615850e-47 |
| Msa0118540 | Msa0669190 | 0.808832 | 2.551908e-50 | -8.615850e-47 |
| Msa0607510 | Msa0669190 | 0.801145 | 1.033697e-48 | -8.615850e-47 |
| Msa0609970 | Msa0669190 | 0.806109 | 9.650796e-50 | -8.615850e-47 |
| Msa0617260 | Msa0669190 | 0.832627 | 8.483665e-56 | -8.615850e-47 |
| Msa0618200 | Msa0669190 | -0.834609 | 2.714973e-56 | -8.615850e-47 |
| Msa0628290 | Msa0669190 | 0.825062 | 5.754059e-54 | -8.615850e-47 |
| Msa0630950 | Msa0669190 | 0.898691 | 4.139738e-77 | -8.615850e-47 |
| Msa0641320 | Msa0669190 | 0.801593 | 8.368151e-49 | -8.615850e-47 |
| Msa0657460 | Msa0669190 | -0.804176 | 2.448924e-49 | -8.615850e-47 |
| Msa0661710 | Msa0669190 | 0.802754 | 4.827360e-49 | -8.615850e-47 |
| Msa0669190 | Msa0673470 | 0.818539 | 1.859714e-52 | -8.615850e-47 |
| Msa0669190 | Msa0679550 | 0.805490 | 1.301478e-49 | -8.615850e-47 |
| Msa0669190 | Msa0693790 | 0.849788 | 2.582226e-60 | -8.615850e-47 |
| Msa0669190 | Msa0704730 | 0.816580 | 5.138874e-52 | -8.615850e-47 |
| Msa0669190 | Msa0705600 | 0.803255 | 3.803688e-49 | -8.615850e-47 |
| Msa0669190 | Msa0712310 | 0.811920 | 5.500085e-51 | -8.615850e-47 |
| Msa0669190 | Msa0731180 | 0.805644 | 1.208344e-49 | -8.615850e-47 |
| Msa0669190 | Msa0747260 | 0.806023 | 1.006082e-49 | -8.615850e-47 |
| Msa0669190 | Msa0795010 | 0.803362 | 3.614992e-49 | -8.615850e-47 |
| Msa0669190 | Msa0795030 | 0.808271 | 3.361568e-50 | -8.615850e-47 |
| Msa0669190 | Msa0805500 | 0.801645 | 8.165711e-49 | -8.615850e-47 |
| Msa0669190 | Msa0820530 | -0.807236 | 5.579486e-50 | -8.615850e-47 |
| Msa0669190 | Msa0830990 | 0.810318 | 1.223741e-50 | -8.615850e-47 |
| Msa0669190 | Msa0871890 | 0.807206 | 5.661928e-50 | -8.615850e-47 |
| Msa0669190 | Msa0872440 | 0.806330 | 8.669805e-50 | -8.615850e-47 |
| Msa0669190 | Msa0879860 | 0.836297 | 1.016488e-56 | -8.615850e-47 |
| Msa0669190 | Msa0891600 | -0.819512 | 1.116963e-52 | -8.615850e-47 |
| Msa0669190 | Msa0905380 | 0.823495 | 1.343032e-53 | -8.615850e-47 |
| Msa0669190 | Msa0921870 | 0.813772 | 2.161197e-51 | -8.615850e-47 |
| Msa0669190 | Msa0924150 | -0.827540 | 1.478429e-54 | -8.615850e-47 |
| Msa0669190 | Msa0930140 | 0.802264 | 6.092480e-49 | -8.615850e-47 |
| Msa0669190 | Msa0933290 | 0.828711 | 7.723425e-55 | -8.615850e-47 |
| Msa0669190 | Msa0937330 | 0.816893 | 4.372061e-52 | -8.615850e-47 |
| Msa0669190 | Msa0945120 | 0.832276 | 1.036532e-55 | -8.615850e-47 |
| Msa0669190 | Msa0963090 | -0.809928 | 1.484696e-50 | -8.615850e-47 |
| Msa0669190 | Msa0993240 | 0.805355 | 1.389615e-49 | -8.615850e-47 |
| Msa0669190 | Msa0994370 | 0.807912 | 4.007987e-50 | -8.615850e-47 |
| Msa0669190 | Msa1023180 | 0.802649 | 5.074286e-49 | -8.615850e-47 |
| Msa0669190 | Msa1036740 | 0.818752 | 1.663539e-52 | -8.615850e-47 |
| Msa0669190 | Msa1043050 | 0.800881 | 1.170693e-48 | -8.615850e-47 |
| Msa0669190 | Msa1071320 | 0.801410 | 9.125603e-49 | -8.615850e-47 |
| Msa0669190 | Msa1089840 | 0.803111 | 4.074878e-49 | -8.615850e-47 |
| Msa0669190 | Msa1094430 | 0.806423 | 8.287806e-50 | -8.615850e-47 |
| Msa0669190 | Msa1113590 | 0.811365 | 7.261617e-51 | -8.615850e-47 |
| Msa0669190 | Msa1126120 | -0.804160 | 2.467710e-49 | -8.615850e-47 |
| Msa0669190 | Msa1136790 | 0.818330 | 2.074232e-52 | -8.615850e-47 |
| Msa0669190 | Msa1163870 | 0.810687 | 1.018439e-50 | -8.615850e-47 |
| Msa0669190 | Msa1164020 | 0.808667 | 2.767509e-50 | -8.615850e-47 |
| Msa0669190 | Msa1172130 | -0.818093 | 2.346313e-52 | -8.615850e-47 |
| Msa0669190 | Msa1174310 | 0.814735 | 1.324370e-51 | -8.615850e-47 |
| Msa0669190 | Msa1176360 | 0.810066 | 1.386642e-50 | -8.615850e-47 |
| Msa0669190 | Msa1211000 | 0.809419 | 1.909984e-50 | -8.615850e-47 |
| Msa0669190 | Msa1253810 | 0.809050 | 2.292121e-50 | -8.615850e-47 |
| Msa0669190 | Msa1259400 | 0.806675 | 7.331844e-50 | -8.615850e-47 |
| Msa0669190 | Msa1296300 | 0.815088 | 1.105522e-51 | -8.615850e-47 |
| Msa0669190 | Msa1314770 | 0.805370 | 1.379569e-49 | -8.615850e-47 |
| Msa0669190 | Msa1330890 | -0.801588 | 8.390062e-49 | -8.615850e-47 |
| Msa0669190 | Msa1338610 | 0.806404 | 8.364036e-50 | -8.615850e-47 |
| Msa0669190 | Msa1339190 | 0.807290 | 5.433422e-50 | -8.615850e-47 |
| Msa0669190 | Msa1340830 | 0.803754 | 2.997930e-49 | -8.615850e-47 |
| Msa0669190 | Msa1348600 | 0.825124 | 5.560612e-54 | -8.615850e-47 |
| Msa0669190 | Msa1348850 | 0.805774 | 1.134955e-49 | -8.615850e-47 |
| Msa0669190 | Msa1350690 | 0.806171 | 9.363158e-50 | -8.615850e-47 |
| Msa0669190 | Msa1363700 | 0.804316 | 2.290457e-49 | -8.615850e-47 |
| Msa0669190 | Msa1385350 | 0.802293 | 6.009605e-49 | -8.615850e-47 |
| Msa0669190 | Msa1393800 | 0.803737 | 3.022792e-49 | -8.615850e-47 |
| Msa0669190 | Msa1396940 | 0.802489 | 5.477043e-49 | -8.615850e-47 |
| Msa0669190 | Msa1398170 | 0.806343 | 8.615927e-50 | -8.615850e-47 |
| Msa0669190 | Msa1412930 | -0.816086 | 6.627756e-52 | -8.615850e-47 |
| Msa0669190 | Msa1426920 | 0.807327 | 5.335340e-50 | -8.615850e-47 |
| Msa0669190 | Msa1443610 | 0.830336 | 3.111072e-55 | -8.615850e-47 |
| Msa0669190 | Msa1447890 | 0.802299 | 5.993506e-49 | -8.615850e-47 |
| Msa0669190 | Msa1448630 | 0.825245 | 5.206377e-54 | -8.615850e-47 |
| Msa0669190 | Msa1452470 | 0.810837 | 9.450414e-51 | -8.615850e-47 |
| Msa0669190 | Msa1463600 | 0.809861 | 1.534653e-50 | -8.615850e-47 |
| Msa0130520 | Msa0669190 | 0.803084 | 4.126787e-49 | -8.615850e-47 |
| Msa0137870 | Msa0669190 | 0.811600 | 6.457302e-51 | -8.615850e-47 |
| Msa0140400 | Msa0669190 | 0.806841 | 6.763437e-50 | -8.615850e-47 |
| Msa0154920 | Msa0669190 | 0.802740 | 4.861017e-49 | -8.615850e-47 |
| Msa0155880 | Msa0669190 | 0.827209 | 1.775538e-54 | -8.615850e-47 |
| Msa0176330 | Msa0669190 | 0.813896 | 2.029129e-51 | -8.615850e-47 |
| Msa0177270 | Msa0669190 | 0.800624 | 1.320643e-48 | -8.615850e-47 |
| Msa0183460 | Msa0669190 | 0.811323 | 7.413741e-51 | -8.615850e-47 |
| Msa0186310 | Msa0669190 | 0.821090 | 4.857727e-53 | -8.615850e-47 |
| Msa0187230 | Msa0669190 | 0.806526 | 7.882700e-50 | -8.615850e-47 |
| Msa0187490 | Msa0669190 | 0.801257 | 9.807392e-49 | -8.615850e-47 |
| Msa0193600 | Msa0669190 | 0.822981 | 1.770972e-53 | -8.615850e-47 |
| Msa0212360 | Msa0669190 | 0.820472 | 6.738541e-53 | -8.615850e-47 |
| Msa0220080 | Msa0669190 | 0.815899 | 7.299002e-52 | -8.615850e-47 |
| Msa0229360 | Msa0669190 | 0.805161 | 1.525604e-49 | -8.615850e-47 |
| Msa0231790 | Msa0669190 | 0.818366 | 2.034852e-52 | -8.615850e-47 |
| Msa0404700 | Msa0669190 | 0.803950 | 2.728915e-49 | -8.615850e-47 |
| Msa0419640 | Msa0669190 | -0.812254 | 4.651284e-51 | -8.615850e-47 |
| Msa0426810 | Msa0669190 | 0.804796 | 1.819098e-49 | -8.615850e-47 |
| Msa0429950 | Msa0669190 | 0.817312 | 3.520943e-52 | -8.615850e-47 |
| Msa0433530 | Msa0669190 | 0.825570 | 4.362908e-54 | -8.615850e-47 |
| Msa0436190 | Msa0669190 | 0.843885 | 1.064053e-58 | -8.615850e-47 |
| Msa0439890 | Msa0669190 | 0.806933 | 6.467412e-50 | -8.615850e-47 |
| Msa0455590 | Msa0669190 | 0.807271 | 5.482664e-50 | -8.615850e-47 |
| Msa0462540 | Msa0669190 | 0.809509 | 1.826830e-50 | -8.615850e-47 |
| Msa0477260 | Msa0669190 | 0.809085 | 2.251862e-50 | -8.615850e-47 |
| Msa0241740 | Msa0669190 | 0.810788 | 9.684795e-51 | -8.615850e-47 |
| Msa0251770 | Msa0669190 | 0.803234 | 3.842435e-49 | -8.615850e-47 |
| Msa0265160 | Msa0669190 | 0.823240 | 1.540826e-53 | -8.615850e-47 |
| Msa0266210 | Msa0669190 | 0.805722 | 1.163864e-49 | -8.615850e-47 |
| Msa0271360 | Msa0669190 | 0.820279 | 7.458541e-53 | -8.615850e-47 |
| Msa0273650 | Msa0669190 | 0.819753 | 9.843014e-53 | -8.615850e-47 |
| Msa0284820 | Msa0669190 | 0.826889 | 2.117110e-54 | -8.615850e-47 |
| Msa0287670 | Msa0669190 | 0.805473 | 1.312342e-49 | -8.615850e-47 |
| Msa0289400 | Msa0669190 | 0.801173 | 1.020198e-48 | -8.615850e-47 |
| Msa0296920 | Msa0669190 | 0.805900 | 1.067701e-49 | -8.615850e-47 |
| Msa0304840 | Msa0669190 | 0.802394 | 5.727638e-49 | -8.615850e-47 |
| Msa0307470 | Msa0669190 | 0.813801 | 2.129281e-51 | -8.615850e-47 |
| Msa0313930 | Msa0669190 | 0.802877 | 4.554730e-49 | -8.615850e-47 |
| Msa0320430 | Msa0669190 | 0.800640 | 1.310790e-48 | -8.615850e-47 |
| Msa0489610 | Msa0669190 | 0.817600 | 3.031826e-52 | -8.615850e-47 |
| Msa0493920 | Msa0669190 | 0.801787 | 7.637170e-49 | -8.615850e-47 |
| Msa0524600 | Msa0669190 | 0.824974 | 6.033789e-54 | -8.615850e-47 |
| Msa0534410 | Msa0669190 | 0.893687 | 4.984672e-75 | -8.615850e-47 |
| Msa0565620 | Msa0669190 | -0.808493 | 3.014840e-50 | -8.615850e-47 |
| Msa0588240 | Msa0669190 | 0.823464 | 1.366210e-53 | -8.615850e-47 |
| Msa0590650 | Msa0669190 | 0.933485 | 1.746182e-95 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669190 | MtrunA17_Chr4g0008411 | 95.939 | 197 | 8 | 0 | 1 | 197 | 1 | 197 | 1.44e-136 | 382 |
| Msa0669190 | MtrunA17_Chr4g0008421 | 73.786 | 206 | 45 | 3 | 1 | 201 | 88 | 289 | 1.50e-104 | 302 |
| Msa0669190 | MtrunA17_Chr7g0266341 | 37.500 | 200 | 107 | 10 | 11 | 201 | 102 | 292 | 4.97e-25 | 99.0 |
| Msa0669190 | MtrunA17_Chr2g0306771 | 37.500 | 192 | 94 | 6 | 11 | 201 | 211 | 377 | 2.91e-22 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0669190 | AT2G37970.1 | 60.648 | 216 | 69 | 3 | 1 | 201 | 32 | 246 | 7.21e-89 | 261 |
| Msa0669190 | AT5G20140.1 | 34.031 | 191 | 103 | 5 | 11 | 201 | 206 | 373 | 4.03e-21 | 90.1 |
| Msa0669190 | AT3G10130.1 | 36.683 | 199 | 110 | 9 | 11 | 201 | 115 | 305 | 3.08e-19 | 84.0 |
| Msa0669190 | AT5G20140.2 | 33.708 | 178 | 95 | 5 | 11 | 188 | 206 | 360 | 1.45e-18 | 82.8 |
Find 37 sgRNAs with CRISPR-Local
Find 51 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACAAAGATGGTGGGTTTA+AGG | 0.186605 | 4_4:+10757953 | Msa0669190:CDS |
| TTTGATATGGGTTTAGTATT+TGG | 0.199696 | 4_4:+10757810 | None:intergenic |
| GAGGAAGGTGGGAAGAAATA+TGG | 0.218011 | 4_4:+10758215 | Msa0669190:CDS |
| AAATATGGGGTGATGACTTT+TGG | 0.279249 | 4_4:+10758230 | Msa0669190:CDS |
| GGAGAAGTTGAGGTTGAGTT+TGG | 0.287349 | 4_4:+10758289 | Msa0669190:CDS |
| TTCTTCTCATTTGTCACAAC+TGG | 0.315475 | 4_4:-10758101 | None:intergenic |
| TTGTCACCTTTGAATGTTGA+TGG | 0.319242 | 4_4:-10757936 | None:intergenic |
| CGATTACACTTCCAATGTTT+AGG | 0.323933 | 4_4:+10758369 | Msa0669190:CDS |
| AGGAAGGTGGGAAGAAATAT+GGG | 0.347201 | 4_4:+10758216 | Msa0669190:CDS |
| ATCATCATGGTTCATTCAAC+AGG | 0.393338 | 4_4:-10758410 | None:intergenic |
| TTTGAATGTTGATGGATCAT+AGG | 0.426497 | 4_4:-10757928 | None:intergenic |
| ATCACAACCCTCTCATCAAT+AGG | 0.466452 | 4_4:-10758188 | None:intergenic |
| TTGTGATAAGAGAGGAAGGT+GGG | 0.471919 | 4_4:+10758204 | Msa0669190:CDS |
| AGGGTTGTGATAAGAGAGGA+AGG | 0.486753 | 4_4:+10758200 | Msa0669190:CDS |
| AGGAGAAGGTGGAGAAGTTG+AGG | 0.492065 | 4_4:+10758279 | Msa0669190:CDS |
| AGGTTGAGTTTGGAGAAAGA+TGG | 0.495669 | 4_4:+10758299 | Msa0669190:CDS |
| TCCAATGTTTAGGACTAATG+AGG | 0.518493 | 4_4:+10758379 | Msa0669190:CDS |
| TGAGAGGGTTGTGATAAGAG+AGG | 0.529346 | 4_4:+10758196 | Msa0669190:CDS |
| TATGATCCATCAACATTCAA+AGG | 0.542632 | 4_4:+10757930 | Msa0669190:CDS |
| ACCTAAGCCTATTGATGAGA+GGG | 0.548573 | 4_4:+10758181 | Msa0669190:CDS |
| ACCCTCTCATCAATAGGCTT+AGG | 0.549333 | 4_4:-10758182 | None:intergenic |
| TGAAGTGGTGAAGGAGAAGG+TGG | 0.561858 | 4_4:+10758268 | Msa0669190:CDS |
| ACCTCATTAGTCCTAAACAT+TGG | 0.572004 | 4_4:-10758380 | None:intergenic |
| ACATTCAAAGGTGACAAAGA+TGG | 0.580055 | 4_4:+10757942 | Msa0669190:CDS |
| AACATTGGAAGTGTAATCGC+AGG | 0.582795 | 4_4:-10758365 | None:intergenic |
| GGCAAATGATGAAGTGGTGA+AGG | 0.590348 | 4_4:+10758259 | Msa0669190:CDS |
| TTCAAAGGTGACAAAGATGG+TGG | 0.592548 | 4_4:+10757945 | Msa0669190:CDS |
| GTGATTTCAGCTACTAGAGA+AGG | 0.604224 | 4_4:-10757906 | None:intergenic |
| TACCTAAGCCTATTGATGAG+AGG | 0.615966 | 4_4:+10758180 | Msa0669190:CDS |
| TGATGAAGTGGTGAAGGAGA+AGG | 0.619951 | 4_4:+10758265 | Msa0669190:CDS |
| ATTGGAAGTGTAATCGCAGG+TGG | 0.628003 | 4_4:-10758362 | None:intergenic |
| AGGAGTGGCAAATGATGAAG+TGG | 0.629210 | 4_4:+10758253 | Msa0669190:CDS |
| TCAAAGGTGACAAAGATGGT+GGG | 0.643345 | 4_4:+10757946 | Msa0669190:CDS |
| GTTGTGATAAGAGAGGAAGG+TGG | 0.671478 | 4_4:+10758203 | Msa0669190:CDS |
| GGAAGGTGGGAAGAAATATG+GGG | 0.674694 | 4_4:+10758217 | Msa0669190:CDS |
| GACAAATGAGAAGAACAAGA+TGG | 0.687039 | 4_4:+10758109 | Msa0669190:CDS |
| GACTTCACCAGTTATCACAA+AGG | 0.689440 | 4_4:+10758040 | Msa0669190:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTGAGTATTTCATATTT+TGG | - | chr4_4:10757855-10757874 | None:intergenic | 20.0% |
| !!! | AAGGTTTTAGTTGATTACAT+AGG | + | chr4_4:10757972-10757991 | Msa0669190:CDS | 25.0% |
| !! | GTTGATTACATAGGAATTTT+TGG | + | chr4_4:10757981-10758000 | Msa0669190:CDS | 25.0% |
| !!! | TTTTGTGTTTTTGTGTTTTG+AGG | - | chr4_4:10758011-10758030 | None:intergenic | 25.0% |
| !!! | TCTACTTTTTCATACATAGA+AGG | - | chr4_4:10758155-10758174 | None:intergenic | 25.0% |
| ! | TTCTATGTATGAAAAAGTAG+AGG | + | chr4_4:10758154-10758173 | Msa0669190:CDS | 25.0% |
| !!! | AAAGATGGTTTTAAGGTTAT+TGG | + | chr4_4:10758314-10758333 | Msa0669190:CDS | 25.0% |
| !!! | GTTATTGGAGATTTTTTGTT+GGG | + | chr4_4:10758329-10758348 | Msa0669190:CDS | 25.0% |
| ! | TTTGAATGTTGATGGATCAT+AGG | - | chr4_4:10757931-10757950 | None:intergenic | 30.0% |
| TATGATCCATCAACATTCAA+AGG | + | chr4_4:10757930-10757949 | Msa0669190:CDS | 30.0% | |
| ! | TTGTTTTCCTTTGTGATAAC+TGG | - | chr4_4:10758050-10758069 | None:intergenic | 30.0% |
| !! | TTTGGAGAAAGATGGTTTTA+AGG | + | chr4_4:10758307-10758326 | Msa0669190:CDS | 30.0% |
| !!! | GGTTATTGGAGATTTTTTGT+TGG | + | chr4_4:10758328-10758347 | Msa0669190:CDS | 30.0% |
| !!! | TCGGATTACATAGTTTTGTG+TGG | - | chr4_4:10757877-10757896 | None:intergenic | 35.0% |
| !! | CTAGAGAAGGTGCATATTTT+CGG | - | chr4_4:10757896-10757915 | None:intergenic | 35.0% |
| TTGTCACCTTTGAATGTTGA+TGG | - | chr4_4:10757939-10757958 | None:intergenic | 35.0% | |
| ACATTCAAAGGTGACAAAGA+TGG | + | chr4_4:10757942-10757961 | Msa0669190:CDS | 35.0% | |
| TTCTTCTCATTTGTCACAAC+TGG | - | chr4_4:10758104-10758123 | None:intergenic | 35.0% | |
| GACAAATGAGAAGAACAAGA+TGG | + | chr4_4:10758109-10758128 | Msa0669190:CDS | 35.0% | |
| ! | AAATATGGGGTGATGACTTT+TGG | + | chr4_4:10758230-10758249 | Msa0669190:CDS | 35.0% |
| !!! | TTGGAGATTTTTTGTTGGGT+AGG | + | chr4_4:10758333-10758352 | Msa0669190:CDS | 35.0% |
| CGATTACACTTCCAATGTTT+AGG | + | chr4_4:10758369-10758388 | Msa0669190:CDS | 35.0% | |
| ! | TCCAATGTTTAGGACTAATG+AGG | + | chr4_4:10758379-10758398 | Msa0669190:CDS | 35.0% |
| ACCTCATTAGTCCTAAACAT+TGG | - | chr4_4:10758383-10758402 | None:intergenic | 35.0% | |
| GTGATTTCAGCTACTAGAGA+AGG | - | chr4_4:10757909-10757928 | None:intergenic | 40.0% | |
| TTCAAAGGTGACAAAGATGG+TGG | + | chr4_4:10757945-10757964 | Msa0669190:CDS | 40.0% | |
| TCAAAGGTGACAAAGATGGT+GGG | + | chr4_4:10757946-10757965 | Msa0669190:CDS | 40.0% | |
| !! | TGACAAAGATGGTGGGTTTA+AGG | + | chr4_4:10757953-10757972 | Msa0669190:CDS | 40.0% |
| GACTTCACCAGTTATCACAA+AGG | + | chr4_4:10758040-10758059 | Msa0669190:CDS | 40.0% | |
| TACCTAAGCCTATTGATGAG+AGG | + | chr4_4:10758180-10758199 | Msa0669190:CDS | 40.0% | |
| ACCTAAGCCTATTGATGAGA+GGG | + | chr4_4:10758181-10758200 | Msa0669190:CDS | 40.0% | |
| ATCACAACCCTCTCATCAAT+AGG | - | chr4_4:10758191-10758210 | None:intergenic | 40.0% | |
| TTGTGATAAGAGAGGAAGGT+GGG | + | chr4_4:10758204-10758223 | Msa0669190:CDS | 40.0% | |
| AGGAAGGTGGGAAGAAATAT+GGG | + | chr4_4:10758216-10758235 | Msa0669190:CDS | 40.0% | |
| AGGTTGAGTTTGGAGAAAGA+TGG | + | chr4_4:10758299-10758318 | Msa0669190:CDS | 40.0% | |
| ! | AACATTGGAAGTGTAATCGC+AGG | - | chr4_4:10758368-10758387 | None:intergenic | 40.0% |
| ACCCTCTCATCAATAGGCTT+AGG | - | chr4_4:10758185-10758204 | None:intergenic | 45.0% | |
| TGAGAGGGTTGTGATAAGAG+AGG | + | chr4_4:10758196-10758215 | Msa0669190:CDS | 45.0% | |
| AGGGTTGTGATAAGAGAGGA+AGG | + | chr4_4:10758200-10758219 | Msa0669190:CDS | 45.0% | |
| GTTGTGATAAGAGAGGAAGG+TGG | + | chr4_4:10758203-10758222 | Msa0669190:CDS | 45.0% | |
| GAGGAAGGTGGGAAGAAATA+TGG | + | chr4_4:10758215-10758234 | Msa0669190:CDS | 45.0% | |
| GGAAGGTGGGAAGAAATATG+GGG | + | chr4_4:10758217-10758236 | Msa0669190:CDS | 45.0% | |
| ! | TATGGGGTGATGACTTTTGG+AGG | + | chr4_4:10758233-10758252 | Msa0669190:CDS | 45.0% |
| AGGAGTGGCAAATGATGAAG+TGG | + | chr4_4:10758253-10758272 | Msa0669190:CDS | 45.0% | |
| GGCAAATGATGAAGTGGTGA+AGG | + | chr4_4:10758259-10758278 | Msa0669190:CDS | 45.0% | |
| TGATGAAGTGGTGAAGGAGA+AGG | + | chr4_4:10758265-10758284 | Msa0669190:CDS | 45.0% | |
| GGAGAAGTTGAGGTTGAGTT+TGG | + | chr4_4:10758289-10758308 | Msa0669190:CDS | 45.0% | |
| ! | ATTGGAAGTGTAATCGCAGG+TGG | - | chr4_4:10758365-10758384 | None:intergenic | 45.0% |
| !! | GGTGATGACTTTTGGAGGAG+TGG | + | chr4_4:10758238-10758257 | Msa0669190:CDS | 50.0% |
| TGAAGTGGTGAAGGAGAAGG+TGG | + | chr4_4:10758268-10758287 | Msa0669190:CDS | 50.0% | |
| AGGAGAAGGTGGAGAAGTTG+AGG | + | chr4_4:10758279-10758298 | Msa0669190:CDS | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4_4 | gene | 10757816 | 10758421 | 10757816 | ID=Msa0669190;Name=Msa0669190 |
| chr4_4 | mRNA | 10757816 | 10758421 | 10757816 | ID=Msa0669190-mRNA-1;Parent=Msa0669190;Name=Msa0669190-mRNA-1;_AED=0.25;_eAED=0.26;_QI=0|-1|0|1|-1|1|1|0|201 |
| chr4_4 | exon | 10757816 | 10758421 | 10757816 | ID=Msa0669190-mRNA-1:exon:3206;Parent=Msa0669190-mRNA-1 |
| chr4_4 | CDS | 10757816 | 10758421 | 10757816 | ID=Msa0669190-mRNA-1:cds;Parent=Msa0669190-mRNA-1 |
| Gene Sequence |
| Protein sequence |
