AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0329700

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329700 MtrunA17_Chr2g0311631 96.978 364 11 0 1 364 1 364 0.0 724
Msa0329700 MtrunA17_Chr2g0311641 97.605 167 4 0 1 167 1 167 5.62e-120 343
Msa0329700 MtrunA17_Chr3g0093741 44.475 362 186 5 6 361 2 354 9.66e-103 306
Msa0329700 MtrunA17_Chr3g0093751 43.370 362 190 5 6 361 2 354 3.48e-101 303
Msa0329700 MtrunA17_Chr3g0093761 43.923 362 187 5 6 361 2 353 8.31e-100 299
Msa0329700 MtrunA17_Chr7g0265351 42.415 323 172 5 44 361 24 337 1.36e-81 252
Msa0329700 MtrunA17_Chr2g0311621 84.615 117 18 0 1 117 1 117 4.18e-68 209
Msa0329700 MtrunA17_Chr8g0336781 37.746 355 191 12 21 361 62 400 1.17e-63 208
Msa0329700 MtrunA17_Chr8g0336851 36.544 353 197 10 21 361 27 364 2.80e-62 203
Msa0329700 MtrunA17_Chr8g0348081 36.676 349 202 9 21 361 27 364 7.65e-62 202
Msa0329700 MtrunA17_Chr7g0225881 34.857 350 205 8 21 357 27 366 4.55e-61 200
Msa0329700 MtrunA17_Chr8g0336631 35.043 351 206 6 21 361 27 365 1.17e-60 199
Msa0329700 MtrunA17_Chr8g0336761 35.795 352 201 8 21 361 27 364 1.31e-60 199
Msa0329700 MtrunA17_Chr2g0311761 33.903 351 212 8 21 361 32 372 2.51e-60 198
Msa0329700 MtrunA17_Chr2g0311831 34.473 351 209 8 21 361 32 371 3.87e-60 198
Msa0329700 MtrunA17_Chr1g0184241 33.237 346 217 6 20 361 32 367 1.38e-59 196
Msa0329700 MtrunA17_Chr1g0179801 34.125 337 199 6 21 342 26 354 2.12e-59 196
Msa0329700 MtrunA17_Chr6g0472861 33.149 362 196 9 21 356 27 368 1.32e-57 191
Msa0329700 MtrunA17_Chr3g0109041 32.370 346 217 9 22 357 10 348 4.32e-57 189
Msa0329700 MtrunA17_Chr7g0265221 32.500 360 204 10 21 354 25 371 1.02e-56 189
Msa0329700 MtrunA17_Chr1g0161111 34.746 354 201 10 20 360 94 430 1.43e-56 190
Msa0329700 MtrunA17_Chr1g0161081 35.028 354 200 10 20 360 35 371 1.83e-56 188
Msa0329700 MtrunA17_Chr8g0336751 34.278 353 209 9 20 361 57 397 3.50e-56 188
Msa0329700 MtrunA17_Chr8g0354261 33.521 355 214 9 21 363 32 376 5.59e-56 187
Msa0329700 MtrunA17_Chr7g0266651 31.429 350 225 7 21 363 23 364 2.84e-55 185
Msa0329700 MtrunA17_Chr1g0161041 36.494 348 201 10 21 360 59 394 3.83e-55 186
Msa0329700 MtrunA17_Chr8g0336861 35.693 339 190 11 21 346 27 350 3.85e-55 185
Msa0329700 MtrunA17_Chr4g0066121 34.139 331 194 9 22 341 28 345 7.13e-55 184
Msa0329700 MtrunA17_Chr2g0311921 33.524 349 206 9 8 342 3 339 1.55e-54 183
Msa0329700 MtrunA17_Chr8g0345831 32.653 343 210 10 28 361 13 343 1.91e-54 182
Msa0329700 MtrunA17_Chr8g0354241 32.958 355 216 10 21 363 32 376 2.47e-54 183
Msa0329700 MtrunA17_Chr1g0167951 33.903 351 208 7 21 361 19 355 4.67e-53 179
Msa0329700 MtrunA17_Chr2g0296371 32.059 340 209 8 33 361 28 356 1.70e-52 177
Msa0329700 MtrunA17_Chr2g0311701 32.059 340 199 11 21 342 32 357 1.90e-52 178
Msa0329700 MtrunA17_Chr4g0045441 34.347 329 178 10 55 357 26 342 7.57e-52 176
Msa0329700 MtrunA17_Chr3g0126741 33.882 304 185 6 45 342 49 342 3.15e-51 174
Msa0329700 MtrunA17_Chr2g0311861 32.571 350 197 9 21 361 28 347 1.15e-50 172
Msa0329700 MtrunA17_Chr7g0242551 33.824 340 193 10 22 341 15 342 1.74e-50 172
Msa0329700 MtrunA17_Chr3g0128001 34.493 345 192 10 32 362 14 338 1.84e-50 172
Msa0329700 MtrunA17_Chr2g0311681 32.945 343 192 12 21 342 26 351 2.23e-50 172
Msa0329700 MtrunA17_Chr7g0235951 31.250 352 211 9 21 356 32 368 3.30e-50 172
Msa0329700 MtrunA17_Chr1g0167911 32.749 342 207 9 21 352 19 347 3.49e-50 171
Msa0329700 MtrunA17_Chr6g0455481 32.710 321 197 8 33 346 19 327 2.09e-49 169
Msa0329700 MtrunA17_Chr1g0162351 30.663 362 201 11 30 362 44 384 2.37e-49 170
Msa0329700 MtrunA17_Chr7g0239111 32.670 352 212 11 21 361 19 356 3.80e-49 169
Msa0329700 MtrunA17_Chr4g0045411 32.459 305 179 7 55 341 30 325 4.71e-49 168
Msa0329700 MtrunA17_Chr2g0311691 31.563 339 202 8 21 342 26 351 6.22e-49 169
Msa0329700 MtrunA17_Chr5g0423191 31.805 349 220 7 22 363 13 350 7.83e-49 168
Msa0329700 MtrunA17_Chr7g0239101 34.012 344 200 12 32 363 30 358 2.21e-48 167
Msa0329700 MtrunA17_Chr1g0187831 30.878 353 215 11 21 356 29 369 2.43e-48 167
Msa0329700 MtrunA17_Chr5g0424201 30.976 297 185 6 54 342 43 327 4.09e-48 166
Msa0329700 MtrunA17_Chr4g0006371 30.836 347 203 8 22 341 14 350 5.25e-48 166
Msa0329700 MtrunA17_Chr1g0167961 34.030 335 189 10 21 340 34 351 5.65e-48 166
Msa0329700 MtrunA17_Chr5g0437181 33.033 333 200 8 22 341 14 336 7.99e-48 165
Msa0329700 MtrunA17_Chr1g0162321 29.834 362 204 11 30 362 44 384 1.76e-47 165
Msa0329700 MtrunA17_Chr3g0113641 32.059 340 204 9 15 341 12 337 3.93e-47 164
Msa0329700 MtrunA17_Chr7g0239121 32.479 351 213 12 22 361 16 353 4.67e-47 163
Msa0329700 MtrunA17_Chr2g0311711 29.024 379 231 13 2 364 12 368 6.33e-47 163
Msa0329700 MtrunA17_Chr8g0375571 30.423 355 225 8 21 364 10 353 6.53e-47 163
Msa0329700 MtrunA17_Chr4g0055591 29.630 351 224 9 21 361 24 361 9.88e-47 162
Msa0329700 MtrunA17_Chr5g0421091 32.676 355 210 9 22 363 11 349 1.17e-46 162
Msa0329700 MtrunA17_Chr1g0167931 32.194 351 177 9 21 361 19 318 1.60e-46 161
Msa0329700 MtrunA17_Chr1g0187811 29.692 357 220 11 21 357 144 489 1.64e-46 165
Msa0329700 MtrunA17_Chr8g0364471 30.471 361 202 12 21 356 32 368 2.47e-46 162
Msa0329700 MtrunA17_Chr3g0125201 33.003 303 170 10 55 342 3 287 8.06e-46 159
Msa0329700 MtrunA17_Chr1g0184121 32.335 334 193 8 28 346 9 324 8.38e-46 159
Msa0329700 MtrunA17_Chr1g0184161 31.402 328 203 7 28 346 10 324 8.60e-46 159
Msa0329700 MtrunA17_Chr1g0187821 27.688 372 243 8 3 357 4 366 8.85e-46 160
Msa0329700 MtrunA17_Chr4g0045451 33.121 314 172 9 55 342 26 327 1.02e-45 159
Msa0329700 MtrunA17_Chr1g0184111 32.036 334 194 8 28 346 9 324 1.71e-45 159
Msa0329700 MtrunA17_Chr5g0420901 31.624 351 218 8 22 363 12 349 2.70e-45 159
Msa0329700 MtrunA17_Chr5g0426891 31.437 334 204 11 21 342 3 323 3.96e-45 158
Msa0329700 MtrunA17_Chr2g0314381 30.058 346 218 10 27 361 48 380 4.29e-45 159
Msa0329700 MtrunA17_Chr4g0045471 30.564 337 197 9 32 342 3 328 6.04e-45 157
Msa0329700 MtrunA17_Chr5g0423251 31.412 347 200 9 32 361 23 348 6.33e-45 157
Msa0329700 MtrunA17_Chr8g0371931 34.307 274 167 6 54 321 38 304 9.21e-45 157
Msa0329700 MtrunA17_Chr7g0250511 30.931 333 210 9 20 343 12 333 1.07e-44 157
Msa0329700 MtrunA17_Chr4g0050031 32.390 318 191 6 55 361 62 366 1.25e-44 157
Msa0329700 MtrunA17_Chr7g0239821 32.386 352 211 12 22 361 29 365 1.30e-44 157
Msa0329700 MtrunA17_Chr5g0412651 31.105 344 209 10 27 356 9 338 1.36e-44 156
Msa0329700 MtrunA17_Chr1g0162361 34.114 299 166 8 54 334 26 311 2.03e-44 156
Msa0329700 MtrunA17_Chr5g0412681 33.871 310 180 10 55 356 33 325 2.09e-44 156
Msa0329700 MtrunA17_Chr5g0423221 31.831 355 211 13 21 361 36 373 2.40e-44 157
Msa0329700 MtrunA17_Chr5g0420941 32.184 348 220 8 21 362 10 347 3.42e-44 155
Msa0329700 MtrunA17_Chr2g0314391 29.143 350 228 9 21 361 35 373 3.61e-44 156
Msa0329700 MtrunA17_Chr3g0102041 32.482 274 172 5 54 321 38 304 4.06e-44 155
Msa0329700 MtrunA17_Chr7g0239071 34.507 284 168 7 85 361 29 301 8.14e-44 154
Msa0329700 MtrunA17_Chr5g0398291 31.928 332 196 10 22 333 8 329 2.00e-43 154
Msa0329700 MtrunA17_Chr5g0420981 30.435 345 214 9 21 353 17 347 3.02e-43 153
Msa0329700 MtrunA17_Chr1g0184101 31.818 330 200 10 28 346 9 324 5.35e-43 152
Msa0329700 MtrunA17_Chr5g0423201 30.508 354 217 11 21 361 12 349 5.82e-43 152
Msa0329700 MtrunA17_Chr8g0375701 29.973 367 217 13 15 361 9 355 8.31e-43 152
Msa0329700 MtrunA17_Chr5g0420951 28.736 348 232 5 21 361 17 355 9.47e-43 152
Msa0329700 MtrunA17_Chr8g0375601 28.771 358 225 9 22 363 11 354 1.14e-42 152
Msa0329700 MtrunA17_Chr5g0421101 29.661 354 223 10 21 363 12 350 2.62e-42 150
Msa0329700 MtrunA17_Chr8g0375671 29.462 353 227 8 22 363 18 359 4.47e-42 150
Msa0329700 MtrunA17_Chr5g0421011 27.507 349 233 10 21 361 12 348 5.74e-42 150
Msa0329700 MtrunA17_Chr5g0412671 30.725 345 209 11 27 356 9 338 6.33e-42 149
Msa0329700 MtrunA17_Chr2g0311741 31.596 307 177 6 55 347 27 314 6.42e-42 149
Msa0329700 MtrunA17_Chr1g0184151 31.098 328 204 8 28 346 10 324 8.60e-42 149
Msa0329700 MtrunA17_Chr2g0314401 27.429 350 234 9 21 361 16 354 1.27e-41 149
Msa0329700 MtrunA17_Chr8g0371921 33.577 274 169 6 54 321 38 304 1.61e-41 149
Msa0329700 MtrunA17_Chr8g0365241 29.118 340 224 6 21 353 22 351 1.63e-41 149
Msa0329700 MtrunA17_Chr5g0424211 31.338 284 173 7 55 328 42 313 1.75e-41 148
Msa0329700 MtrunA17_Chr1g0191201 31.464 321 185 10 34 338 40 341 1.16e-40 147
Msa0329700 MtrunA17_Chr4g0045431 28.846 312 192 7 55 344 26 329 2.54e-40 145
Msa0329700 MtrunA17_Chr5g0405411 33.818 275 167 7 54 321 38 304 3.63e-40 145
Msa0329700 MtrunA17_Chr7g0239091 30.882 340 206 10 31 362 134 452 7.82e-40 146
Msa0329700 MtrunA17_Chr5g0421041 28.814 354 224 9 21 363 12 348 1.25e-39 144
Msa0329700 MtrunA17_Chr4g0064781 31.210 314 194 9 55 361 50 348 3.36e-39 142
Msa0329700 MtrunA17_Chr3g0130391 30.952 336 198 8 24 338 32 354 6.22e-39 142
Msa0329700 MtrunA17_Chr6g0474391 31.045 335 181 9 31 338 41 352 1.25e-38 142
Msa0329700 MtrunA17_Chr7g0232161 35.495 293 160 11 22 303 25 299 3.48e-38 139
Msa0329700 MtrunA17_Chr1g0204181 30.725 345 196 8 15 338 25 347 3.75e-38 140
Msa0329700 MtrunA17_Chr2g0289341 29.450 309 195 8 54 354 3 296 3.95e-38 139
Msa0329700 MtrunA17_Chr2g0332191 29.431 299 184 6 55 342 52 334 4.51e-38 140
Msa0329700 MtrunA17_Chr7g0247991 30.882 340 208 9 21 346 32 358 9.67e-38 139
Msa0329700 MtrunA17_Chr3g0114861 30.091 329 208 8 22 341 6 321 9.85e-38 138
Msa0329700 MtrunA17_Chr2g0311611 80.282 71 14 0 212 282 1 71 1.25e-37 129
Msa0329700 MtrunA17_Chr8g0375681 30.877 285 173 8 87 361 15 285 1.78e-37 136
Msa0329700 MtrunA17_Chr7g0236011 28.158 380 228 9 3 356 8 368 4.28e-37 137
Msa0329700 MtrunA17_Chr8g0335411 29.815 379 223 12 3 356 8 368 7.16e-37 137
Msa0329700 MtrunA17_Chr5g0423211 29.444 360 220 13 21 364 12 353 9.87e-37 136
Msa0329700 MtrunA17_Chr8g0370711 29.968 317 198 10 55 361 52 354 1.43e-36 135
Msa0329700 MtrunA17_Chr8g0358941 26.829 328 206 7 54 364 26 336 3.85e-36 134
Msa0329700 MtrunA17_Chr3g0121141 30.599 317 179 13 54 354 3 294 4.12e-36 133
Msa0329700 MtrunA17_Chr7g0220001 28.615 325 202 7 33 345 18 324 6.46e-36 133
Msa0329700 MtrunA17_Chr4g0011311 27.820 266 179 5 21 282 32 288 8.75e-36 132
Msa0329700 MtrunA17_Chr7g0220011 29.268 328 196 10 33 345 16 322 1.11e-35 132
Msa0329700 MtrunA17_Chr3g0126761 37.989 179 101 3 166 342 43 213 1.57e-35 129
Msa0329700 MtrunA17_Chr5g0439011 29.073 313 193 10 54 354 4 299 1.81e-35 132
Msa0329700 MtrunA17_Chr8g0370721 28.707 317 202 10 55 361 52 354 1.54e-34 130
Msa0329700 MtrunA17_Chr4g0045461 27.327 333 209 8 32 341 3 325 2.94e-34 129
Msa0329700 MtrunA17_Chr3g0145171 28.981 314 205 8 55 361 52 354 7.35e-34 128
Msa0329700 MtrunA17_Chr2g0313111 27.628 333 196 11 50 364 23 328 1.18e-33 127
Msa0329700 MtrunA17_Chr7g0235981 27.066 351 205 10 21 361 18 327 3.10e-33 126
Msa0329700 MtrunA17_Chr8g0336801 41.447 152 79 3 213 361 12 156 3.35e-33 121
Msa0329700 MtrunA17_Chr5g0420721 31.140 228 143 5 142 363 33 252 3.72e-33 124
Msa0329700 MtrunA17_Chr2g0285931 29.073 313 179 9 55 346 28 318 6.45e-33 125
Msa0329700 MtrunA17_Chr4g0066991 27.855 359 204 12 21 361 32 353 6.88e-33 125
Msa0329700 MtrunA17_Chr3g0125421 28.443 334 197 12 34 346 23 335 6.95e-33 125
Msa0329700 MtrunA17_Chr1g0162191 28.696 345 211 12 30 357 20 346 1.46e-32 125
Msa0329700 MtrunA17_Chr8g0351101 28.788 330 200 7 33 343 33 346 2.20e-32 124
Msa0329700 MtrunA17_Chr3g0145181 28.826 281 180 9 69 341 66 334 5.42e-32 123
Msa0329700 MtrunA17_Chr1g0148771 28.231 294 186 7 55 342 63 337 6.33e-31 120
Msa0329700 MtrunA17_Chr3g0145201 28.826 281 180 9 69 341 701 969 1.03e-30 123
Msa0329700 MtrunA17_Chr3g0087031 28.528 326 209 12 32 346 34 346 1.04e-30 120
Msa0329700 MtrunA17_Chr8g0362741 26.515 264 170 6 21 282 32 273 1.35e-30 117
Msa0329700 MtrunA17_Chr4g0068891 28.431 306 190 8 55 348 20 308 3.09e-30 117
Msa0329700 MtrunA17_Chr5g0420881 37.748 151 86 2 212 361 1 144 9.94e-30 111
Msa0329700 MtrunA17_Chr3g0092531 30.921 304 175 10 55 343 6 289 1.18e-29 116
Msa0329700 MtrunA17_Chr2g0319491 29.450 309 201 8 38 340 15 312 1.43e-29 116
Msa0329700 MtrunA17_Chr3g0114871 30.932 236 145 6 54 282 41 265 1.02e-28 112
Msa0329700 MtrunA17_Chr4g0052251 28.205 312 182 9 55 346 29 318 1.13e-28 114
Msa0329700 MtrunA17_Chr8g0336831 33.632 223 136 7 20 235 26 243 7.17e-28 109
Msa0329700 MtrunA17_Chr8g0384461 27.299 348 219 12 16 343 5 338 2.00e-27 110
Msa0329700 MtrunA17_Chr1g0194321 25.301 332 199 8 45 348 10 320 2.10e-27 110
Msa0329700 MtrunA17_Chr2g0314371 26.899 316 183 13 27 309 23 323 2.35e-27 110
Msa0329700 MtrunA17_Chr8g0384481 28.793 323 201 10 33 340 38 346 2.66e-27 110
Msa0329700 MtrunA17_Chr4g0053251 29.932 294 168 12 55 321 8 290 2.57e-26 107
Msa0329700 MtrunA17_Chr6g0488511 28.615 325 183 13 55 361 3 296 3.95e-26 106
Msa0329700 MtrunA17_Chr8g0336871 37.297 185 92 6 184 361 7 174 5.90e-26 102
Msa0329700 MtrunA17_Chr1g0170631 35.323 201 111 7 166 363 10 194 8.91e-26 102
Msa0329700 MtrunA17_Chr7g0247741 29.293 297 189 10 54 342 10 293 1.70e-24 102
Msa0329700 MtrunA17_Chr4g0075471 34.706 170 97 5 182 348 3 161 1.04e-23 95.9
Msa0329700 MtrunA17_Chr6g0486831 27.500 320 191 11 58 350 24 329 2.15e-23 99.4
Msa0329700 MtrunA17_Chr4g0064771 34.574 188 108 5 172 353 27 205 1.81e-22 94.0
Msa0329700 MtrunA17_Chr3g0092581 36.765 136 76 3 209 343 35 161 6.24e-22 92.0
Msa0329700 MtrunA17_Chr8g0348951 27.517 298 194 11 54 342 9 293 2.28e-21 93.6
Msa0329700 MtrunA17_Chr5g0394071 32.164 171 107 2 172 340 7 170 4.49e-20 86.7
Msa0329700 MtrunA17_Chr1g0161101 42.975 121 50 5 204 322 399 502 5.91e-19 88.2
Msa0329700 MtrunA17_Chr8g0336791 35.583 163 93 7 20 175 26 183 6.05e-19 84.0
Msa0329700 MtrunA17_Chr8g0389941 23.270 318 205 9 58 350 37 340 7.32e-19 86.7
Msa0329700 MtrunA17_Chr7g0233661 33.775 151 91 2 192 340 1 144 8.29e-19 82.8
Msa0329700 MtrunA17_Chr8g0364171 31.579 133 84 1 150 282 1 126 1.26e-18 81.6
Msa0329700 MtrunA17_Chr4g0004061 26.230 305 197 9 55 346 9 298 1.86e-18 85.1
Msa0329700 MtrunA17_Chr4g0055911 25.786 318 218 10 50 356 4 314 2.04e-18 85.1
Msa0329700 MtrunA17_Chr4g0004071 26.871 294 172 9 55 328 9 279 6.77e-18 83.6
Msa0329700 MtrunA17_Chr4g0037611 31.111 135 83 3 209 340 33 160 7.26e-18 80.5
Msa0329700 MtrunA17_Chr2g0293931 29.050 179 111 5 173 341 13 185 1.40e-17 80.5
Msa0329700 MtrunA17_Chr3g0105281 26.449 276 168 9 49 312 30 282 1.59e-17 82.4
Msa0329700 MtrunA17_Chr3g0138351 27.381 336 192 14 54 361 6 317 1.69e-16 79.3
Msa0329700 MtrunA17_Chr4g0009561 24.169 331 210 9 54 361 6 318 3.14e-16 78.6
Msa0329700 MtrunA17_Chr4g0055871 22.769 325 220 10 50 359 4 312 4.20e-15 75.1
Msa0329700 MtrunA17_Chr7g0228631 37.037 108 51 2 4 107 1 95 1.10e-14 70.1
Msa0329700 MtrunA17_Chr1g0158011 30.208 192 110 6 167 342 59 242 4.35e-14 71.6
Msa0329700 MtrunA17_Chr1g0148781 26.959 319 180 13 55 343 8 303 1.72e-13 70.5
Msa0329700 MtrunA17_Chr1g0167921 33.898 118 63 3 168 281 50 156 2.16e-13 67.8
Msa0329700 MtrunA17_Chr8g0375581 37.333 75 39 2 205 278 18 85 7.34e-13 63.9
Msa0329700 MtrunA17_Chr7g0256741 28.065 310 183 15 55 345 10 298 5.73e-12 65.9
Msa0329700 MtrunA17_Chr1g0170641 29.861 144 97 4 27 168 18 159 1.01e-11 62.8
Msa0329700 MtrunA17_Chr2g0319521 30.097 103 65 2 180 282 29 124 1.27e-11 62.0
Msa0329700 MtrunA17_Chr8g0375661 33.577 137 81 4 21 151 17 149 4.75e-11 60.8
Msa0329700 MtrunA17_Chr1g0168001 30.882 136 81 5 21 146 19 151 8.13e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0329700 AT3G12900.1 57.386 352 143 2 10 360 10 355 6.22e-153 435
Msa0329700 AT3G13610.1 46.556 363 182 6 2 361 8 361 6.72e-114 336
Msa0329700 AT1G55290.1 45.125 359 185 4 7 361 11 361 1.65e-111 330
Msa0329700 AT5G12270.1 40.896 357 194 9 13 361 12 359 1.86e-79 248
Msa0329700 AT5G59530.1 34.181 354 208 9 21 361 23 364 9.07e-60 197
Msa0329700 AT5G43440.1 35.196 358 200 12 21 361 23 365 2.23e-59 196
Msa0329700 AT4G10500.1 34.154 325 196 7 31 347 18 332 7.81e-59 194
Msa0329700 AT5G43450.1 34.078 358 214 8 9 356 12 357 2.91e-58 193
Msa0329700 AT4G10490.1 32.102 352 216 9 22 364 11 348 3.65e-58 192
Msa0329700 AT5G59540.1 32.773 357 212 8 20 361 23 366 5.62e-58 192
Msa0329700 AT1G03410.2 34.524 336 203 6 20 345 18 346 2.83e-57 191
Msa0329700 AT2G36690.2 34.181 354 212 8 21 362 20 364 4.39e-57 190
Msa0329700 AT2G36690.1 34.181 354 212 8 21 362 20 364 4.39e-57 190
Msa0329700 AT1G03410.1 34.524 336 203 6 20 345 55 383 6.82e-57 191
Msa0329700 AT1G06640.1 35.795 352 200 11 20 356 24 364 6.91e-56 187
Msa0329700 AT1G04350.1 32.479 351 218 9 20 361 20 360 6.98e-55 184
Msa0329700 AT1G06650.2 34.349 361 203 11 20 361 24 369 8.68e-54 182
Msa0329700 AT3G55970.1 33.333 339 196 10 22 341 14 341 9.95e-54 181
Msa0329700 AT1G06620.1 32.479 351 218 7 20 361 25 365 4.92e-53 179
Msa0329700 AT2G30830.1 33.239 355 207 9 21 361 20 358 5.45e-53 179
Msa0329700 AT3G61400.1 33.425 362 204 11 2 341 5 351 7.78e-52 176
Msa0329700 AT1G03400.1 31.180 356 204 11 21 362 19 347 2.56e-50 172
Msa0329700 AT1G77330.1 33.882 304 167 7 55 343 3 287 3.91e-50 170
Msa0329700 AT3G19010.1 35.294 323 178 11 37 338 8 320 1.02e-49 170
Msa0329700 AT3G19010.4 35.294 323 178 11 37 338 8 320 1.02e-49 170
Msa0329700 AT1G06645.1 33.604 369 192 14 20 361 37 379 1.28e-49 171
Msa0329700 AT1G04380.1 31.737 334 214 6 32 361 22 345 1.28e-48 167
Msa0329700 AT2G30840.1 31.161 353 221 10 21 361 20 362 1.78e-48 167
Msa0329700 AT5G43440.2 36.364 286 154 11 9 281 12 282 1.90e-46 160
Msa0329700 AT3G21420.1 32.303 356 219 10 20 361 15 362 2.09e-46 162
Msa0329700 AT2G25450.1 32.219 329 197 10 21 336 20 335 3.77e-46 161
Msa0329700 AT5G43450.2 36.071 280 160 7 9 281 12 279 4.02e-46 159
Msa0329700 AT5G05600.1 32.635 334 200 8 22 341 27 349 6.51e-46 161
Msa0329700 AT3G11180.2 33.750 320 183 10 22 325 56 362 7.06e-46 162
Msa0329700 AT3G11180.1 32.738 336 197 10 22 341 56 378 7.75e-46 161
Msa0329700 AT3G19010.3 34.641 306 173 9 37 338 8 290 5.43e-45 157
Msa0329700 AT5G59540.2 34.182 275 156 7 20 282 23 284 5.68e-45 156
Msa0329700 AT2G38240.1 32.934 334 196 12 22 341 12 331 1.29e-44 157
Msa0329700 AT2G30840.3 30.878 353 216 11 21 361 20 356 1.70e-44 157
Msa0329700 AT2G44800.1 31.915 329 203 10 25 343 19 336 1.72e-44 157
Msa0329700 AT4G16330.2 30.573 314 191 9 53 357 65 360 2.10e-44 157
Msa0329700 AT1G03400.2 28.906 384 204 12 21 362 19 375 2.25e-44 157
Msa0329700 AT3G19000.1 32.164 342 186 11 32 342 3 329 2.36e-44 156
Msa0329700 AT4G22880.1 32.229 332 196 11 22 333 7 329 3.81e-44 156
Msa0329700 AT4G22880.2 32.229 332 196 11 22 333 7 329 3.81e-44 156
Msa0329700 AT4G22880.3 32.229 332 196 11 22 333 7 329 3.81e-44 156
Msa0329700 AT3G60290.1 32.523 329 201 10 25 343 19 336 6.12e-44 155
Msa0329700 AT1G15550.1 31.879 298 179 6 54 342 56 338 6.74e-44 155
Msa0329700 AT5G08640.2 32.993 294 180 7 56 341 41 325 1.07e-43 154
Msa0329700 AT5G08640.1 32.993 294 180 7 56 341 41 325 1.07e-43 154
Msa0329700 AT1G06640.2 35.714 280 158 8 20 288 24 292 3.03e-43 152
Msa0329700 AT4G25300.1 31.661 319 192 9 55 361 52 356 6.46e-43 152
Msa0329700 AT1G06640.3 36.296 270 150 8 20 278 24 282 2.67e-42 149
Msa0329700 AT1G17010.1 29.841 315 205 7 54 361 53 358 2.87e-42 151
Msa0329700 AT3G51240.1 33.818 275 167 7 54 321 37 303 1.12e-41 149
Msa0329700 AT1G06620.2 34.328 268 160 6 20 281 25 282 1.46e-41 147
Msa0329700 AT1G78550.1 29.970 337 219 9 33 361 29 356 3.22e-41 148
Msa0329700 AT1G17020.1 28.863 343 217 11 33 361 29 358 4.06e-41 148
Msa0329700 AT4G25420.1 31.515 330 191 8 33 343 40 353 1.07e-40 147
Msa0329700 AT1G62380.1 30.938 320 191 9 55 364 7 306 1.35e-40 145
Msa0329700 AT5G24530.1 29.794 339 205 11 25 347 5 326 1.43e-40 146
Msa0329700 AT1G06650.1 34.672 274 157 8 20 282 24 286 3.07e-40 144
Msa0329700 AT3G61400.2 33.445 299 166 8 2 282 5 288 9.64e-40 142
Msa0329700 AT3G55970.2 31.429 280 162 10 22 282 14 282 1.16e-39 142
Msa0329700 AT2G30840.2 32.593 270 163 7 21 281 20 279 1.90e-38 139
Msa0329700 AT1G04380.2 34.252 254 156 5 32 284 22 265 7.78e-38 137
Msa0329700 AT1G05010.1 31.210 314 185 9 55 354 4 300 1.39e-37 138
Msa0329700 AT5G07480.1 28.615 325 205 9 33 343 24 335 1.79e-37 138
Msa0329700 AT4G25310.1 31.894 301 177 11 72 361 70 353 2.20e-37 138
Msa0329700 AT1G12010.1 29.739 306 193 8 55 354 7 296 2.26e-37 137
Msa0329700 AT5G63590.1 31.544 298 183 10 53 341 12 297 2.73e-37 137
Msa0329700 AT1G60980.1 28.916 332 200 7 32 343 35 350 5.41e-37 137
Msa0329700 AT4G16330.1 30.888 259 158 7 107 357 9 254 6.20e-37 134
Msa0329700 AT1G80330.1 29.316 307 189 9 55 348 49 340 6.88e-37 137
Msa0329700 AT1G78550.2 31.095 283 181 7 84 361 5 278 8.41e-37 134
Msa0329700 AT5G20400.1 28.743 334 210 11 38 361 33 348 1.03e-36 136
Msa0329700 AT5G51810.1 29.012 324 205 6 32 343 41 351 1.06e-36 137
Msa0329700 AT5G07200.1 29.118 340 206 9 25 343 29 354 2.47e-36 135
Msa0329700 AT1G80340.1 29.392 296 187 6 55 342 50 331 1.30e-34 130
Msa0329700 AT3G19000.2 31.271 291 154 11 32 291 3 278 1.76e-34 128
Msa0329700 AT5G63600.1 27.425 299 193 7 53 344 31 312 7.28e-34 128
Msa0329700 AT3G51240.2 33.790 219 134 5 107 321 8 219 1.21e-33 126
Msa0329700 AT1G49390.1 28.399 331 213 10 39 361 34 348 2.58e-33 127
Msa0329700 AT3G19010.2 34.328 268 145 11 37 283 8 265 2.70e-33 125
Msa0329700 AT1G78440.1 28.115 313 181 8 55 346 18 307 5.53e-33 125
Msa0329700 AT5G63600.2 27.333 300 193 8 53 344 31 313 7.62e-33 125
Msa0329700 AT4G25300.2 34.872 195 112 4 174 361 76 262 1.07e-32 123
Msa0329700 AT1G44090.1 32.013 303 175 11 54 338 62 351 1.11e-32 126
Msa0329700 AT4G21200.1 31.579 266 163 6 54 314 41 292 1.12e-32 125
Msa0329700 AT4G21690.1 28.571 308 191 9 49 342 41 333 2.92e-32 124
Msa0329700 AT1G30040.1 29.299 314 173 9 55 346 31 317 6.07e-32 123
Msa0329700 AT5G05600.2 30.182 275 167 8 22 282 27 290 8.54e-32 121
Msa0329700 AT5G54000.2 27.795 331 215 10 39 361 35 349 8.91e-31 120
Msa0329700 AT5G43935.1 27.063 303 182 9 50 342 10 283 1.58e-30 118
Msa0329700 AT5G20550.1 28.743 334 203 15 33 346 19 337 3.18e-30 119
Msa0329700 AT2G34555.1 27.778 324 196 11 36 346 14 312 4.38e-30 118
Msa0329700 AT5G63595.1 27.526 287 173 7 40 322 11 266 3.89e-29 114
Msa0329700 AT1G47990.1 27.217 327 184 9 54 354 14 312 4.28e-29 115
Msa0329700 AT4G25420.2 31.227 269 150 8 33 282 40 292 6.17e-29 114
Msa0329700 AT2G19590.1 31.290 310 179 14 54 354 10 294 1.45e-28 113
Msa0329700 AT1G49390.2 28.369 282 181 9 88 361 1 269 7.62e-28 110
Msa0329700 AT5G54000.1 28.369 282 181 9 88 361 1 269 1.04e-27 110
Msa0329700 AT5G51810.2 29.323 266 163 6 32 285 41 293 9.40e-27 108
Msa0329700 AT3G49620.1 27.986 293 176 10 55 321 34 317 4.03e-25 105
Msa0329700 AT1G50960.1 28.758 306 190 12 42 335 27 316 1.68e-24 102
Msa0329700 AT1G02400.1 27.070 314 190 10 54 348 23 316 3.10e-24 102
Msa0329700 AT3G50210.4 27.483 302 171 9 55 321 8 296 1.07e-23 100
Msa0329700 AT3G50210.1 27.483 302 171 9 55 321 8 296 1.07e-23 100
Msa0329700 AT3G50210.3 27.483 302 171 9 55 321 8 296 1.07e-23 100
Msa0329700 AT3G46490.1 26.045 311 206 8 58 350 20 324 6.80e-23 98.2
Msa0329700 AT3G49630.3 27.875 287 176 8 70 337 30 304 1.46e-22 97.4
Msa0329700 AT3G49630.1 27.875 287 176 8 70 337 34 308 1.59e-22 97.4
Msa0329700 AT4G25310.2 27.852 298 165 11 72 361 70 325 4.25e-22 95.9
Msa0329700 AT5G63580.2 30.901 233 141 8 55 280 19 238 4.79e-22 94.0
Msa0329700 AT5G63580.1 30.901 233 141 8 55 280 19 238 6.06e-22 94.0
Msa0329700 AT2G19590.2 31.835 267 149 13 85 342 26 268 6.74e-22 94.7
Msa0329700 AT5G07480.2 27.354 223 150 5 128 343 9 226 1.08e-20 90.5
Msa0329700 AT4G23340.1 28.571 287 180 12 78 353 30 302 1.39e-20 91.7
Msa0329700 AT1G52820.1 24.839 310 206 8 52 349 9 303 6.12e-20 89.7
Msa0329700 AT1G35190.1 25.325 308 187 9 72 350 26 319 1.58e-19 88.6
Msa0329700 AT3G46490.2 26.786 280 179 9 58 317 20 293 4.16e-19 87.4
Msa0329700 AT3G46500.5 26.059 307 196 11 58 346 20 313 4.99e-19 87.0
Msa0329700 AT1G35190.2 26.441 295 177 10 72 350 26 296 8.24e-19 86.3
Msa0329700 AT3G46500.7 27.536 276 169 11 55 312 17 279 6.83e-18 83.6
Msa0329700 AT1G14130.1 27.389 314 188 12 55 360 9 290 3.01e-17 82.0
Msa0329700 AT4G23340.2 30.978 184 113 7 175 353 10 184 3.39e-17 79.7
Msa0329700 AT1G14120.2 26.168 321 199 12 55 362 8 303 8.06e-17 80.5
Msa0329700 AT1G14120.1 26.168 321 199 12 55 362 8 303 8.06e-17 80.5
Msa0329700 AT1G14120.3 26.168 321 199 12 55 362 8 303 8.06e-17 80.5
Msa0329700 AT5G51310.1 26.568 271 173 6 54 309 4 263 8.98e-17 80.9
Msa0329700 AT4G03070.1 25.081 307 198 9 55 345 14 304 2.13e-16 79.7
Msa0329700 AT3G50210.2 31.579 171 93 5 163 321 56 214 2.93e-16 78.2
Msa0329700 AT3G49630.2 30.387 181 109 4 163 337 66 235 6.11e-16 77.4
Msa0329700 AT3G46500.4 29.213 178 120 4 172 346 3 177 3.22e-15 73.9
Msa0329700 AT3G46500.10 28.497 193 127 5 162 346 50 239 7.78e-15 73.9
Msa0329700 AT3G46500.1 28.497 193 127 5 162 346 50 239 7.78e-15 73.9
Msa0329700 AT3G46480.1 32.800 125 81 2 226 350 156 277 3.69e-14 72.4
Msa0329700 AT1G30040.2 27.200 250 133 9 55 282 31 253 4.82e-14 72.0
Msa0329700 AT3G46500.3 32.075 159 97 5 162 312 50 205 8.95e-14 70.5
Msa0329700 AT3G46500.6 33.333 144 90 4 172 312 34 174 1.75e-13 68.9
Msa0329700 AT3G46500.8 33.333 144 90 4 172 312 34 174 1.75e-13 68.9
Msa0329700 AT4G16765.5 30.709 127 85 3 224 350 75 198 3.47e-12 65.5
Msa0329700 AT4G16765.6 27.500 200 129 9 162 350 50 244 6.65e-12 65.5
Msa0329700 AT4G16765.1 27.500 200 129 9 162 350 50 244 6.65e-12 65.5
Msa0329700 AT4G16765.2 27.500 200 129 9 162 350 50 244 6.65e-12 65.5
Msa0329700 AT4G16765.3 31.481 162 95 9 162 312 50 206 1.04e-11 64.7
Msa0329700 AT1G15540.1 23.729 295 195 10 54 333 8 287 4.99e-11 63.5
Msa0329700 AT1G15540.4 23.729 295 195 10 54 333 8 287 4.99e-11 63.5
Msa0329700 AT1G15540.3 23.729 295 195 10 54 333 15 294 5.81e-11 63.5
Msa0329700 AT1G15540.2 23.729 295 195 10 54 333 11 290 6.16e-11 63.5

Find 116 sgRNAs with CRISPR-Local

Find 210 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCCAATCTTCTCTGTAAATT+TGG 0.072760 2_4:-43569128 None:intergenic
TAATTTGGCATGCTACTATT+TGG 0.142264 2_4:+43569495 Msa0329700:three_prime_UTR
CAAGATAGTTAAAGACATTT+TGG 0.145772 2_4:+43567428 Msa0329700:CDS
ATGCTACTATTTGGGTTATT+TGG 0.158232 2_4:+43569504 Msa0329700:three_prime_UTR
AGGCTTGCTTTCAATAAATT+TGG 0.167096 2_4:+43570024 Msa0329700:three_prime_UTR
CCATCTTTCTTCACTAATTC+TGG 0.175602 2_4:-43569157 None:intergenic
TTGTGTTCCTTTGGAGTTAT+TGG 0.184201 2_4:+43566752 Msa0329700:CDS
TTTGTTGATTCTTTCATTTA+TGG 0.199358 2_4:-43566601 None:intergenic
AGAAGCTATTACGATTAATT+TGG 0.215935 2_4:+43569480 Msa0329700:three_prime_UTR
CAAAATGTCTTTAACTATCT+TGG 0.221772 2_4:-43567427 None:intergenic
GATTACATGGACAACTTCTA+TGG 0.241742 2_4:+43569211 Msa0329700:CDS
TTGTTGATTCTTTCATTTAT+GGG 0.253546 2_4:-43566600 None:intergenic
ATTATGTAACACTAAATATA+AGG 0.269596 2_4:+43569361 Msa0329700:three_prime_UTR
TAGATACGGAGGTTTAATTA+TGG 0.304926 2_4:+43569447 Msa0329700:three_prime_UTR
TTGCAGTCTTAACGAGTAAA+AGG 0.309798 2_4:+43569680 Msa0329700:three_prime_UTR
GAGTCTAATTGGTTTGAAAA+TGG 0.310823 2_4:+43567500 Msa0329700:CDS
CAATGTTGGTGATGCTTTAG+AGG 0.314053 2_4:+43567716 Msa0329700:CDS
ATCAAAGGCTTAGTAGATTC+AGG 0.318766 2_4:+43566546 Msa0329700:CDS
CCAATCTTCTCTGTAAATTT+GGG 0.344634 2_4:-43569127 None:intergenic
TTCTTCACTAATTCTGGTAA+TGG 0.344994 2_4:-43569151 None:intergenic
TCTTCACTAATTCTGGTAAT+GGG 0.351904 2_4:-43569150 None:intergenic
ATGGAAAGATTATATCAATA+TGG 0.355350 2_4:+43566911 Msa0329700:CDS
ATGAAGATGCTCTTCAATAT+TGG 0.357545 2_4:+43566946 Msa0329700:CDS
AATATAGAAGTTGAACTATT+AGG 0.359664 2_4:+43570116 Msa0329700:three_prime_UTR
TAATATGGTGGATCAAATTA+AGG 0.362380 2_4:+43569574 Msa0329700:three_prime_UTR
AATTTGGCATGCTACTATTT+GGG 0.362679 2_4:+43569496 Msa0329700:three_prime_UTR
AGTGAATCATTGTGTTCCTT+TGG 0.366769 2_4:+43566743 Msa0329700:CDS
GGTTTGGGAGATAGATAATA+TGG 0.375258 2_4:+43569559 Msa0329700:three_prime_UTR
AGGTCTGGATTTGGGCATGC+TGG 0.377896 2_4:-43567540 None:intergenic
GTCATGATATGGTCGTCTTT+TGG 0.384922 2_4:+43569887 Msa0329700:three_prime_UTR
AGTAGATTCAGGTTTATTAG+AGG 0.385396 2_4:+43566557 Msa0329700:CDS
CCAACCGTAAGGTCTGGATT+TGG 0.389550 2_4:-43567549 None:intergenic
CAACCGTAAGGTCTGGATTT+GGG 0.390182 2_4:-43567548 None:intergenic
TTGAGCTTTGATAAGTCAAT+TGG 0.399141 2_4:-43566651 None:intergenic
CCCAAATTTACAGAGAAGAT+TGG 0.415732 2_4:+43569127 Msa0329700:CDS
GTGCTTCTTCAAGATGGAAT+TGG 0.417564 2_4:+43567606 Msa0329700:CDS
TGGTGGTGGAGCTGTTTAGC+TGG 0.418731 2_4:+43569780 Msa0329700:three_prime_UTR
AAGGTTTGGCCACATATATA+CGG 0.420636 2_4:+43569952 Msa0329700:three_prime_UTR
CAGCCGTGTGCGTCTTGCAT+AGG 0.420669 2_4:+43570004 Msa0329700:three_prime_UTR
CAGCTGTCTCCGTGCTGTCA+AGG 0.432126 2_4:+43569822 Msa0329700:three_prime_UTR
TGGACTTACTTGCACTCATT+AGG 0.433113 2_4:-43566969 None:intergenic
AGCTGTCTCCGTGCTGTCAA+GGG 0.438125 2_4:+43569823 Msa0329700:three_prime_UTR
GGCCACCAATGGTCATGATA+TGG 0.456605 2_4:+43569876 Msa0329700:three_prime_UTR
ATGACTAAAGCTCCAGGTAT+TGG 0.458680 2_4:-43567693 None:intergenic
GTTAGAGCAGCAGAAACTCT+TGG 0.459549 2_4:+43566708 Msa0329700:CDS
GCTCCACCACCAACACAGAT+AGG 0.464175 2_4:-43569769 None:intergenic
TTGTTAACTAGAGTTGATCT+TGG 0.466200 2_4:-43569269 None:intergenic
CTTCTTCAAGATGGAATTGG+TGG 0.467099 2_4:+43567609 Msa0329700:CDS
AAAACAGGCTCATGAATTGT+AGG 0.470110 2_4:+43570065 Msa0329700:three_prime_UTR
GGTCTGGATTTGGGCATGCT+GGG 0.474545 2_4:-43567539 None:intergenic
TTTCCTATCTGTGTTGGTGG+TGG 0.479680 2_4:+43569766 Msa0329700:three_prime_UTR
TACAACTTTATTGTAAGAGA+TGG 0.482653 2_4:+43566516 Msa0329700:CDS
CATGACCATTGGTGGCCGTA+TGG 0.483355 2_4:-43569870 None:intergenic
TTATGTAACACTAAATATAA+GGG 0.485476 2_4:+43569362 Msa0329700:three_prime_UTR
AGTCTTGTGGCAGGATTACA+TGG 0.485845 2_4:+43569198 Msa0329700:CDS
GTACAATGAATTTGAAGTGT+TGG 0.486640 2_4:-43566496 None:intergenic
GAACAATGGAACTGATACTC+TGG 0.486728 2_4:-43569098 None:intergenic
TGCTGTTGTCTGCTCCCATA+CGG 0.492015 2_4:+43569855 Msa0329700:three_prime_UTR
TGCCTCTTGAGACACTCCCT+CGG 0.493086 2_4:-43569656 None:intergenic
GCCTCTTGAGACACTCCCTC+GGG 0.493475 2_4:-43569655 None:intergenic
CCAGAATTAGTGAAGAAAGA+TGG 0.497791 2_4:+43569157 Msa0329700:CDS
AGCTTTGATAAGTCAATTGG+TGG 0.502375 2_4:-43566648 None:intergenic
GAAATACTAATTGGTAAGCT+AGG 0.507332 2_4:+43567450 Msa0329700:CDS
GTAGGGCGTCACTCAGATGC+AGG 0.508188 2_4:+43567573 Msa0329700:CDS
ATCACAGTGCTTCTTCAAGA+TGG 0.509919 2_4:+43567600 Msa0329700:CDS
CTTGTAAAACGAAATGAGAA+AGG 0.511429 2_4:-43569323 None:intergenic
ATGACCATTGGTGGCCGTAT+GGG 0.513217 2_4:-43569869 None:intergenic
AAAATCCTGGTAACTAGATA+CGG 0.523082 2_4:+43569433 Msa0329700:three_prime_UTR
ATGCCCAAATCCAGACCTTA+CGG 0.525674 2_4:+43567545 Msa0329700:CDS
CTTGAAATTTCACCAATACC+TGG 0.526103 2_4:+43567681 Msa0329700:CDS
CAGACCTTACGGTTGGTGTA+GGG 0.528479 2_4:+43567556 Msa0329700:CDS
ATTACATGGACAACTTCTAT+GGG 0.529768 2_4:+43569212 Msa0329700:CDS
AACCTCCGTATCTAGTTACC+AGG 0.530712 2_4:-43569438 None:intergenic
CCAGACCTTACGGTTGGTGT+AGG 0.536978 2_4:+43567555 Msa0329700:CDS
ATTGACTTATCAAAGCTCAA+TGG 0.537491 2_4:+43566654 Msa0329700:CDS
TTCTATGGGGTTGCTCATGA+AGG 0.537861 2_4:+43569226 Msa0329700:CDS
TGCACAGTTAAACAAAATCC+TGG 0.537905 2_4:+43569420 Msa0329700:three_prime_UTR
ATGGAACTGATACTCTGGAT+TGG 0.538238 2_4:-43569093 None:intergenic
GTGAAGAAAGATGGATCGGC+TGG 0.540868 2_4:+43569166 Msa0329700:CDS
ATCAAATTAAGGCGATGTCT+TGG 0.542680 2_4:+43569585 Msa0329700:three_prime_UTR
TTATAGAGAAGTCTTGTGGC+AGG 0.543013 2_4:+43569189 Msa0329700:CDS
TGCTCCCATACGGCCACCAA+TGG 0.544026 2_4:+43569865 Msa0329700:three_prime_UTR
TTTGGAAAACAAGAAATGAG+TGG 0.546073 2_4:+43569522 Msa0329700:three_prime_UTR
TTAGTGTTACATAATCATGA+AGG 0.554890 2_4:-43569353 None:intergenic
AGAGATGGCAATGGAATCAA+AGG 0.558480 2_4:+43566531 Msa0329700:CDS
GACCATATCATGACCATTGG+TGG 0.564884 2_4:-43569878 None:intergenic
AGATAGAAAATGTGTTGGAA+TGG 0.566822 2_4:+43566892 Msa0329700:CDS
GGCTTGAAGTTGTCATGACT+CGG 0.570475 2_4:-43569072 None:intergenic
CCTACACCAACCGTAAGGTC+TGG 0.575913 2_4:-43567555 None:intergenic
GACGACCATATCATGACCAT+TGG 0.578383 2_4:-43569881 None:intergenic
GCTGTCTCCGTGCTGTCAAG+GGG 0.578697 2_4:+43569824 Msa0329700:three_prime_UTR
ACAAAGGTTCCGTATATATG+TGG 0.582984 2_4:-43569961 None:intergenic
GGAGCTTTAGTCATCAATGT+TGG 0.591446 2_4:+43567702 Msa0329700:CDS
ACTGATTCCAATAACTCCAA+AGG 0.592220 2_4:-43566759 None:intergenic
GCTGAGGATGAGAATGATGT+TGG 0.599638 2_4:+43567645 Msa0329700:CDS
ATTAGTGAAGAAAGATGGAT+CGG 0.602558 2_4:+43569162 Msa0329700:CDS
TCAATTGGTGGTATATCACA+TGG 0.603575 2_4:-43566636 None:intergenic
TTCATGACTACAGTGAATCA+CGG 0.605187 2_4:-43569386 None:intergenic
TTTATTGTAAGAGATGGCAA+TGG 0.606425 2_4:+43566522 Msa0329700:CDS
ACATTGATGACTAAAGCTCC+AGG 0.610639 2_4:-43567699 None:intergenic
ACTAATTGGTAAGCTAGGAG+TGG 0.611414 2_4:+43567455 Msa0329700:CDS
GACGCCCTACACCAACCGTA+AGG 0.611683 2_4:-43567560 None:intergenic
AAGCCTATGCAAGACGCACA+CGG 0.619832 2_4:-43570007 None:intergenic
ATATACTCCCCTTGACAGCA+CGG 0.630835 2_4:-43569831 None:intergenic
CCAAATCCAGACCTTACGGT+TGG 0.633845 2_4:+43567549 Msa0329700:CDS
TCCTGAGATAGAAAATGTGT+TGG 0.641760 2_4:+43566887 Msa0329700:CDS
ATGATGTTGGCAAAGTAGAG+TGG 0.642163 2_4:+43567658 Msa0329700:CDS
TTGGGAGATAGATAATATGG+TGG 0.650531 2_4:+43569562 Msa0329700:three_prime_UTR
GAGACAAAGAAAACATACAA+AGG 0.652856 2_4:-43569977 None:intergenic
TAGGGCGTCACTCAGATGCA+GGG 0.656324 2_4:+43567574 Msa0329700:CDS
ACCCGAGGGAGTGTCTCAAG+AGG 0.664962 2_4:+43569654 Msa0329700:three_prime_UTR
AATTTGGGTAGAGTGAACAA+TGG 0.679589 2_4:-43569112 None:intergenic
CTGGTTATAGAGAAGTCTTG+TGG 0.705240 2_4:+43569185 Msa0329700:CDS
TTACATGGACAACTTCTATG+GGG 0.705703 2_4:+43569213 Msa0329700:CDS
ATCCTGGTAACTAGATACGG+AGG 0.707984 2_4:+43569436 Msa0329700:three_prime_UTR
TGGCTTATATGTCAAAGCTG+AGG 0.757930 2_4:+43567629 Msa0329700:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAATTTTTAACTAAAGTAAT+TGG - chr2_4:43567018-43567037 None:intergenic 10.0%
!!! AAACAAATTTTAATTTATCA+AGG + chr2_4:43567198-43567217 Msa0329700:intron 10.0%
!! TGTTATTATTATAAAAAGAT+GGG - chr2_4:43567328-43567347 None:intergenic 10.0%
!!! TTGTTATTATTATAAAAAGA+TGG - chr2_4:43567329-43567348 None:intergenic 10.0%
!!! TTAATTATTTCTATATTATC+AGG + chr2_4:43567373-43567392 Msa0329700:intron 10.0%
!!! TAATTATTTCTATATTATCA+GGG + chr2_4:43567374-43567393 Msa0329700:intron 10.0%
!! TGTATTAAAAAAAAATTGAA+TGG - chr2_4:43567841-43567860 None:intergenic 10.0%
!!! TATTTGAATTTTTTTTTTGA+AGG + chr2_4:43567994-43568013 Msa0329700:intron 10.0%
!!! TGAAAATTTAAAACAAAATT+GGG - chr2_4:43568047-43568066 None:intergenic 10.0%
!!! TGTATTTAATTTTTTTTTGA+GGG - chr2_4:43568112-43568131 None:intergenic 10.0%
!!! ATGTATTTAATTTTTTTTTG+AGG - chr2_4:43568113-43568132 None:intergenic 10.0%
!!! TGAAAATTTAAAACAAAATT+GGG - chr2_4:43568047-43568066 None:intergenic 10.0%
!!! TACATTTAAAACTAATTTTA+TGG + chr2_4:43568927-43568946 Msa0329700:intron 10.0%
!!! ACATTTAAAACTAATTTTAT+GGG + chr2_4:43568928-43568947 Msa0329700:intron 10.0%
!!! TATAATAATAACAAGACTTT+TGG + chr2_4:43567335-43567354 Msa0329700:intron 15.0%
!! ATATTTGAATATTTGTACAT+TGG + chr2_4:43568019-43568038 Msa0329700:intron 15.0%
!!! GAAAATTTAAAACAAAATTG+GGG - chr2_4:43568046-43568065 None:intergenic 15.0%
!!! GTGAAAATTTAAAACAAAAT+TGG - chr2_4:43568048-43568067 None:intergenic 15.0%
!!! TTTGTTTTAAATTTTCACAT+TGG + chr2_4:43568050-43568069 Msa0329700:intron 15.0%
!!! GAAAATTTAAAACAAAATTG+GGG - chr2_4:43568046-43568065 None:intergenic 15.0%
!!! CTGAAAATTTAAAACAAAAT+TGG - chr2_4:43568255-43568274 None:intergenic 15.0%
!!! TTTGTTTTAAATTTTCAGAT+TGG + chr2_4:43568257-43568276 Msa0329700:intron 15.0%
!!! TATAAGTTTCAAAAGTATTT+AGG - chr2_4:43568437-43568456 None:intergenic 15.0%
!!! GGAAAAACAATTTTTATATT+GGG + chr2_4:43568643-43568662 Msa0329700:intron 15.0%
!! TTAAAATATCATGTTAGAAA+TGG - chr2_4:43568749-43568768 None:intergenic 15.0%
!!! CAAAATGATATTTATGTTTT+TGG - chr2_4:43568905-43568924 None:intergenic 15.0%
!! AAGTGGTATATTTATATTAT+AGG - chr2_4:43568975-43568994 None:intergenic 15.0%
!! TAAAATAATAGAACAGAAAA+AGG - chr2_4:43569015-43569034 None:intergenic 15.0%
!! ATTATGTAACACTAAATATA+AGG + chr2_4:43569361-43569380 Msa0329700:three_prime_UTR 15.0%
!! TTATGTAACACTAAATATAA+GGG + chr2_4:43569362-43569381 Msa0329700:three_prime_UTR 15.0%
!!! AAAAGATTGCACATTTTTAA+TGG + chr2_4:43566464-43566483 Msa0329700:exon 20.0%
!!! TTGTTGATTCTTTCATTTAT+GGG - chr2_4:43566603-43566622 None:intergenic 20.0%
!!! TTTGTTGATTCTTTCATTTA+TGG - chr2_4:43566604-43566623 None:intergenic 20.0%
!! ATGGAAAGATTATATCAATA+TGG + chr2_4:43566911-43566930 Msa0329700:CDS 20.0%
!!! ACAGAACTATCATTTTTTTA+AGG - chr2_4:43567095-43567114 None:intergenic 20.0%
!!! AGTTTTAAATGCAATATTCT+AGG + chr2_4:43567930-43567949 Msa0329700:intron 20.0%
!!! ATGATAGATAGTTTTTTGTT+TGG - chr2_4:43568495-43568514 None:intergenic 20.0%
!! AAATTCACAGATTATTTAGA+TGG - chr2_4:43568576-43568595 None:intergenic 20.0%
!! ATAATCTGTGAATTTATCTT+TGG + chr2_4:43568581-43568600 Msa0329700:intron 20.0%
!! TAATCTGTGAATTTATCTTT+GGG + chr2_4:43568582-43568601 Msa0329700:intron 20.0%
!! ATGCTAAAAAAATGTCTTTA+GGG - chr2_4:43568621-43568640 None:intergenic 20.0%
!! AATGCTAAAAAAATGTCTTT+AGG - chr2_4:43568622-43568641 None:intergenic 20.0%
!!! AAAGACATTTTTTTAGCATT+CGG + chr2_4:43568622-43568641 Msa0329700:intron 20.0%
!!! CGGAAAAACAATTTTTATAT+TGG + chr2_4:43568642-43568661 Msa0329700:intron 20.0%
!! AGAAAAAGTAAATTTACTAC+CGG - chr2_4:43568828-43568847 None:intergenic 20.0%
!! TATTTATATTATAGGAGCTA+AGG - chr2_4:43568967-43568986 None:intergenic 20.0%
!! TTTAGCATTAACAAAAAAAG+TGG - chr2_4:43568992-43569011 None:intergenic 20.0%
!!! TATTTTAAGATACTAAGCAA+TGG + chr2_4:43569028-43569047 Msa0329700:intron 20.0%
!!! ATTTTAAGATACTAAGCAAT+GGG + chr2_4:43569029-43569048 Msa0329700:intron 20.0%
! TACAACTTTATTGTAAGAGA+TGG + chr2_4:43566516-43566535 Msa0329700:CDS 25.0%
!! AATTTTGTTGAGAAAGTAGA+TGG - chr2_4:43566992-43567011 None:intergenic 25.0%
!! ATAGTTCTGTAAAACTAATG+TGG + chr2_4:43567105-43567124 Msa0329700:intron 25.0%
!!! AGATGGGTTAAATAAGTTTT+TGG - chr2_4:43567312-43567331 None:intergenic 25.0%
! CAAAATGTCTTTAACTATCT+TGG - chr2_4:43567430-43567449 None:intergenic 25.0%
!! CAAGATAGTTAAAGACATTT+TGG + chr2_4:43567428-43567447 Msa0329700:CDS 25.0%
!!! GACATTTTGGAAATACTAAT+TGG + chr2_4:43567441-43567460 Msa0329700:CDS 25.0%
! TCAAAAATTGAGAGTCTAAT+TGG + chr2_4:43567489-43567508 Msa0329700:CDS 25.0%
!!! GTTTTGATAAAAAGAACTTC+AGG + chr2_4:43567797-43567816 Msa0329700:intron 25.0%
!!! CTCAAATTTTGAAAAGTTGA+GGG - chr2_4:43568165-43568184 None:intergenic 25.0%
!!! TGGAAATTTTGAAAAGTTGA+GGG - chr2_4:43568350-43568369 None:intergenic 25.0%
!!! TTGGAAATTTTGAAAAGTTG+AGG - chr2_4:43568351-43568370 None:intergenic 25.0%
! TTCAAAACTTGTGCTAAATT+TGG - chr2_4:43568370-43568389 None:intergenic 25.0%
!! TTTTTATATTGGGAACAACA+AGG + chr2_4:43568653-43568672 Msa0329700:intron 25.0%
!! TAACATTTTCCTTTATCTTC+CGG + chr2_4:43568806-43568825 Msa0329700:intron 25.0%
!! AATAATGCAGTTTGTTTAGA+TGG - chr2_4:43568868-43568887 None:intergenic 25.0%
! TTAGTGTTACATAATCATGA+AGG - chr2_4:43569356-43569375 None:intergenic 25.0%
! AGAAGCTATTACGATTAATT+TGG + chr2_4:43569480-43569499 Msa0329700:three_prime_UTR 25.0%
!! GATTTTCAATAACAAGGTTT+GGG + chr2_4:43569544-43569563 Msa0329700:three_prime_UTR 25.0%
!!! TAATATGGTGGATCAAATTA+AGG + chr2_4:43569574-43569593 Msa0329700:three_prime_UTR 25.0%
!!! TTTAATTGGGAGTGTTTTTT+TGG + chr2_4:43569925-43569944 Msa0329700:three_prime_UTR 25.0%
!!! GTTTTTTTGGTATTAAGGTT+TGG + chr2_4:43569938-43569957 Msa0329700:three_prime_UTR 25.0%
! GTACAATGAATTTGAAGTGT+TGG - chr2_4:43566499-43566518 None:intergenic 30.0%
TTTATTGTAAGAGATGGCAA+TGG + chr2_4:43566522-43566541 Msa0329700:CDS 30.0%
! AGTAGATTCAGGTTTATTAG+AGG + chr2_4:43566557-43566576 Msa0329700:CDS 30.0%
!! ATGGGTTGTATGTACATTTT+TGG - chr2_4:43566585-43566604 None:intergenic 30.0%
! TTGAGCTTTGATAAGTCAAT+TGG - chr2_4:43566654-43566673 None:intergenic 30.0%
! ATTGACTTATCAAAGCTCAA+TGG + chr2_4:43566654-43566673 Msa0329700:CDS 30.0%
TGGAAAAGAACATGAAAAAG+TGG + chr2_4:43566674-43566693 Msa0329700:CDS 30.0%
!!! TAAACAACTTTTTTCTCTGG+TGG - chr2_4:43566816-43566835 None:intergenic 30.0%
! AACTTGTACTCACATTTTGT+CGG - chr2_4:43566839-43566858 None:intergenic 30.0%
AGATAGAAAATGTGTTGGAA+TGG + chr2_4:43566892-43566911 Msa0329700:CDS 30.0%
ATGAAGATGCTCTTCAATAT+TGG + chr2_4:43566946-43566965 Msa0329700:CDS 30.0%
TTTAGTCCCTGTAAATATAG+CGG + chr2_4:43567055-43567074 Msa0329700:intron 30.0%
GAAATACTAATTGGTAAGCT+AGG + chr2_4:43567450-43567469 Msa0329700:CDS 30.0%
!! GAGTCTAATTGGTTTGAAAA+TGG + chr2_4:43567500-43567519 Msa0329700:CDS 30.0%
!! GCTCAAATTTTGAAAAGTTG+AGG - chr2_4:43568166-43568185 None:intergenic 30.0%
TATAGAGACATCTTGTAATG+AGG - chr2_4:43568207-43568226 None:intergenic 30.0%
TAAAGAATGTCTTAGAGCAT+TGG - chr2_4:43568788-43568807 None:intergenic 30.0%
AATTTACTACCGGAAGATAA+AGG - chr2_4:43568818-43568837 None:intergenic 30.0%
TTAGATGGAGTTACATTTGT+AGG - chr2_4:43568853-43568872 None:intergenic 30.0%
CCAATCTTCTCTGTAAATTT+GGG - chr2_4:43569130-43569149 None:intergenic 30.0%
TCTTCACTAATTCTGGTAAT+GGG - chr2_4:43569153-43569172 None:intergenic 30.0%
TTCTTCACTAATTCTGGTAA+TGG - chr2_4:43569154-43569173 None:intergenic 30.0%
ATTAGTGAAGAAAGATGGAT+CGG + chr2_4:43569162-43569181 Msa0329700:CDS 30.0%
ATTACATGGACAACTTCTAT+GGG + chr2_4:43569212-43569231 Msa0329700:CDS 30.0%
! TTGTTAACTAGAGTTGATCT+TGG - chr2_4:43569272-43569291 None:intergenic 30.0%
CTTGTAAAACGAAATGAGAA+AGG - chr2_4:43569326-43569345 None:intergenic 30.0%
AAAATCCTGGTAACTAGATA+CGG + chr2_4:43569433-43569452 Msa0329700:three_prime_UTR 30.0%
TAGATACGGAGGTTTAATTA+TGG + chr2_4:43569447-43569466 Msa0329700:three_prime_UTR 30.0%
TAATTTGGCATGCTACTATT+TGG + chr2_4:43569495-43569514 Msa0329700:three_prime_UTR 30.0%
AATTTGGCATGCTACTATTT+GGG + chr2_4:43569496-43569515 Msa0329700:three_prime_UTR 30.0%
! ATGCTACTATTTGGGTTATT+TGG + chr2_4:43569504-43569523 Msa0329700:three_prime_UTR 30.0%
TTTGGAAAACAAGAAATGAG+TGG + chr2_4:43569522-43569541 Msa0329700:three_prime_UTR 30.0%
!! TGAGTGGATTTTCAATAACA+AGG + chr2_4:43569538-43569557 Msa0329700:three_prime_UTR 30.0%
! GGATTTTCAATAACAAGGTT+TGG + chr2_4:43569543-43569562 Msa0329700:three_prime_UTR 30.0%
!!! TTGTTTTGTTTATGCTGTCA+TGG + chr2_4:43569739-43569758 Msa0329700:three_prime_UTR 30.0%
!!! AGTTGTAGGTGTGTTTTAAT+TGG + chr2_4:43569911-43569930 Msa0329700:three_prime_UTR 30.0%
!!! GTTGTAGGTGTGTTTTAATT+GGG + chr2_4:43569912-43569931 Msa0329700:three_prime_UTR 30.0%
!!! GGAGTGTTTTTTTGGTATTA+AGG + chr2_4:43569933-43569952 Msa0329700:three_prime_UTR 30.0%
GAGACAAAGAAAACATACAA+AGG - chr2_4:43569980-43569999 None:intergenic 30.0%
! TGTATGTTTTCTTTGTCTCT+TGG + chr2_4:43569981-43570000 Msa0329700:three_prime_UTR 30.0%
! AGGCTTGCTTTCAATAAATT+TGG + chr2_4:43570024-43570043 Msa0329700:three_prime_UTR 30.0%
ATCAAAGGCTTAGTAGATTC+AGG + chr2_4:43566546-43566565 Msa0329700:CDS 35.0%
! TCAATTGGTGGTATATCACA+TGG - chr2_4:43566639-43566658 None:intergenic 35.0%
! AGCTTTGATAAGTCAATTGG+TGG - chr2_4:43566651-43566670 None:intergenic 35.0%
AGTGAATCATTGTGTTCCTT+TGG + chr2_4:43566743-43566762 Msa0329700:CDS 35.0%
!! TTGTGTTCCTTTGGAGTTAT+TGG + chr2_4:43566752-43566771 Msa0329700:CDS 35.0%
! ACTGATTCCAATAACTCCAA+AGG - chr2_4:43566762-43566781 None:intergenic 35.0%
!!! CGGTAAACAACTTTTTTCTC+TGG - chr2_4:43566819-43566838 None:intergenic 35.0%
TCCTGAGATAGAAAATGTGT+TGG + chr2_4:43566887-43566906 Msa0329700:CDS 35.0%
! TCCAACACATTTTCTATCTC+AGG - chr2_4:43566891-43566910 None:intergenic 35.0%
CGAAATCCGCTATATTTACA+GGG - chr2_4:43567064-43567083 None:intergenic 35.0%
ACGAAATCCGCTATATTTAC+AGG - chr2_4:43567065-43567084 None:intergenic 35.0%
GTTCTGTAAAACTAATGTGG+AGG + chr2_4:43567108-43567127 Msa0329700:intron 35.0%
CTTGAAATTTCACCAATACC+TGG + chr2_4:43567681-43567700 Msa0329700:CDS 35.0%
CAATAGAAAAGTCGTTCAAG+AGG - chr2_4:43568399-43568418 None:intergenic 35.0%
! CTAATTTTATGGGTGCATTC+AGG + chr2_4:43568938-43568957 Msa0329700:intron 35.0%
AATTTGGGTAGAGTGAACAA+TGG - chr2_4:43569115-43569134 None:intergenic 35.0%
CCCAAATTTACAGAGAAGAT+TGG + chr2_4:43569127-43569146 Msa0329700:CDS 35.0%
GCCAATCTTCTCTGTAAATT+TGG - chr2_4:43569131-43569150 None:intergenic 35.0%
CCATCTTTCTTCACTAATTC+TGG - chr2_4:43569160-43569179 None:intergenic 35.0%
CCAGAATTAGTGAAGAAAGA+TGG + chr2_4:43569157-43569176 Msa0329700:CDS 35.0%
GATTACATGGACAACTTCTA+TGG + chr2_4:43569211-43569230 Msa0329700:CDS 35.0%
TTACATGGACAACTTCTATG+GGG + chr2_4:43569213-43569232 Msa0329700:CDS 35.0%
TTCATGACTACAGTGAATCA+CGG - chr2_4:43569389-43569408 None:intergenic 35.0%
TGCACAGTTAAACAAAATCC+TGG + chr2_4:43569420-43569439 Msa0329700:three_prime_UTR 35.0%
GGTTTGGGAGATAGATAATA+TGG + chr2_4:43569559-43569578 Msa0329700:three_prime_UTR 35.0%
TTGGGAGATAGATAATATGG+TGG + chr2_4:43569562-43569581 Msa0329700:three_prime_UTR 35.0%
ATCAAATTAAGGCGATGTCT+TGG + chr2_4:43569585-43569604 Msa0329700:three_prime_UTR 35.0%
! AAATTGCTTCGTGCACTTTT+TGG + chr2_4:43569630-43569649 Msa0329700:three_prime_UTR 35.0%
TTGCAGTCTTAACGAGTAAA+AGG + chr2_4:43569680-43569699 Msa0329700:three_prime_UTR 35.0%
!! TTTTGTTTATGCTGTCATGG+TGG + chr2_4:43569742-43569761 Msa0329700:three_prime_UTR 35.0%
AAGGTTTGGCCACATATATA+CGG + chr2_4:43569952-43569971 Msa0329700:three_prime_UTR 35.0%
ACAAAGGTTCCGTATATATG+TGG - chr2_4:43569964-43569983 None:intergenic 35.0%
AAAACAGGCTCATGAATTGT+AGG + chr2_4:43570065-43570084 Msa0329700:three_prime_UTR 35.0%
AGAGATGGCAATGGAATCAA+AGG + chr2_4:43566531-43566550 Msa0329700:CDS 40.0%
TGGACTTACTTGCACTCATT+AGG - chr2_4:43566972-43566991 None:intergenic 40.0%
ACTAATTGGTAAGCTAGGAG+TGG + chr2_4:43567455-43567474 Msa0329700:CDS 40.0%
ATCACAGTGCTTCTTCAAGA+TGG + chr2_4:43567600-43567619 Msa0329700:CDS 40.0%
GTGCTTCTTCAAGATGGAAT+TGG + chr2_4:43567606-43567625 Msa0329700:CDS 40.0%
CTTCTTCAAGATGGAATTGG+TGG + chr2_4:43567609-43567628 Msa0329700:CDS 40.0%
TGGCTTATATGTCAAAGCTG+AGG + chr2_4:43567629-43567648 Msa0329700:CDS 40.0%
ATGATGTTGGCAAAGTAGAG+TGG + chr2_4:43567658-43567677 Msa0329700:CDS 40.0%
ATGACTAAAGCTCCAGGTAT+TGG - chr2_4:43567696-43567715 None:intergenic 40.0%
! ACATTGATGACTAAAGCTCC+AGG - chr2_4:43567702-43567721 None:intergenic 40.0%
! GGAGCTTTAGTCATCAATGT+TGG + chr2_4:43567702-43567721 Msa0329700:CDS 40.0%
!! CAATGTTGGTGATGCTTTAG+AGG + chr2_4:43567716-43567735 Msa0329700:CDS 40.0%
ATGGAACTGATACTCTGGAT+TGG - chr2_4:43569096-43569115 None:intergenic 40.0%
GAACAATGGAACTGATACTC+TGG - chr2_4:43569101-43569120 None:intergenic 40.0%
CTGGTTATAGAGAAGTCTTG+TGG + chr2_4:43569185-43569204 Msa0329700:CDS 40.0%
! TTATAGAGAAGTCTTGTGGC+AGG + chr2_4:43569189-43569208 Msa0329700:CDS 40.0%
! ACAGTAGCTGTTGCACTTTT+TGG + chr2_4:43569703-43569722 Msa0329700:three_prime_UTR 40.0%
! GTCATGATATGGTCGTCTTT+TGG + chr2_4:43569887-43569906 Msa0329700:three_prime_UTR 40.0%
GTTAGAGCAGCAGAAACTCT+TGG + chr2_4:43566708-43566727 Msa0329700:CDS 45.0%
ATGCCCAAATCCAGACCTTA+CGG + chr2_4:43567545-43567564 Msa0329700:CDS 45.0%
CAACCGTAAGGTCTGGATTT+GGG - chr2_4:43567551-43567570 None:intergenic 45.0%
GCTGAGGATGAGAATGATGT+TGG + chr2_4:43567645-43567664 Msa0329700:CDS 45.0%
GGCTTGAAGTTGTCATGACT+CGG - chr2_4:43569075-43569094 None:intergenic 45.0%
! AGTCTTGTGGCAGGATTACA+TGG + chr2_4:43569198-43569217 Msa0329700:CDS 45.0%
TTCTATGGGGTTGCTCATGA+AGG + chr2_4:43569226-43569245 Msa0329700:CDS 45.0%
ATCCTGGTAACTAGATACGG+AGG + chr2_4:43569436-43569455 Msa0329700:three_prime_UTR 45.0%
AACCTCCGTATCTAGTTACC+AGG - chr2_4:43569441-43569460 None:intergenic 45.0%
! GGTGGTTTTCCTATCTGTGT+TGG + chr2_4:43569760-43569779 Msa0329700:three_prime_UTR 45.0%
! GGTTTTCCTATCTGTGTTGG+TGG + chr2_4:43569763-43569782 Msa0329700:three_prime_UTR 45.0%
! TTTCCTATCTGTGTTGGTGG+TGG + chr2_4:43569766-43569785 Msa0329700:three_prime_UTR 45.0%
ATATACTCCCCTTGACAGCA+CGG - chr2_4:43569834-43569853 None:intergenic 45.0%
GACCATATCATGACCATTGG+TGG - chr2_4:43569881-43569900 None:intergenic 45.0%
GACGACCATATCATGACCAT+TGG - chr2_4:43569884-43569903 None:intergenic 45.0%
!! GGTCGTCTTTTGGTAGTTGT+AGG + chr2_4:43569897-43569916 Msa0329700:three_prime_UTR 45.0%
!!! AATTTTTTTTTAATACAAAT+TGG + chr2_4:43567844-43567863 Msa0329700:intron 5.0%
!!! AAAAGTTTTTTTTTTTTTTT+AGG - chr2_4:43568700-43568719 None:intergenic 5.0%
!! TTAAAAAAAAAAAAAAAAAC+AGG + chr2_4:43570050-43570069 Msa0329700:three_prime_UTR 5.0%
CCAACCGTAAGGTCTGGATT+TGG - chr2_4:43567552-43567571 None:intergenic 50.0%
CCAAATCCAGACCTTACGGT+TGG + chr2_4:43567549-43567568 Msa0329700:CDS 50.0%
! CAGACCTTACGGTTGGTGTA+GGG + chr2_4:43567556-43567575 Msa0329700:CDS 50.0%
GTGAAGAAAGATGGATCGGC+TGG + chr2_4:43569166-43569185 Msa0329700:CDS 50.0%
!!! GTGCACTTTTTGGAACCCGA+GGG + chr2_4:43569640-43569659 Msa0329700:three_prime_UTR 50.0%
TGCTGTTGTCTGCTCCCATA+CGG + chr2_4:43569855-43569874 Msa0329700:three_prime_UTR 50.0%
! ATGACCATTGGTGGCCGTAT+GGG - chr2_4:43569872-43569891 None:intergenic 50.0%
GGCCACCAATGGTCATGATA+TGG + chr2_4:43569876-43569895 Msa0329700:three_prime_UTR 50.0%
AAGCCTATGCAAGACGCACA+CGG - chr2_4:43570010-43570029 None:intergenic 50.0%
GGTCTGGATTTGGGCATGCT+GGG - chr2_4:43567542-43567561 None:intergenic 55.0%
AGGTCTGGATTTGGGCATGC+TGG - chr2_4:43567543-43567562 None:intergenic 55.0%
CCTACACCAACCGTAAGGTC+TGG - chr2_4:43567558-43567577 None:intergenic 55.0%
! CCAGACCTTACGGTTGGTGT+AGG + chr2_4:43567555-43567574 Msa0329700:CDS 55.0%
! TAGGGCGTCACTCAGATGCA+GGG + chr2_4:43567574-43567593 Msa0329700:CDS 55.0%
!!! CGTGCACTTTTTGGAACCCG+AGG + chr2_4:43569639-43569658 Msa0329700:three_prime_UTR 55.0%
TGCCTCTTGAGACACTCCCT+CGG - chr2_4:43569659-43569678 None:intergenic 55.0%
GCTCCACCACCAACACAGAT+AGG - chr2_4:43569772-43569791 None:intergenic 55.0%
!! TGGTGGTGGAGCTGTTTAGC+TGG + chr2_4:43569780-43569799 Msa0329700:three_prime_UTR 55.0%
AGCTGTCTCCGTGCTGTCAA+GGG + chr2_4:43569823-43569842 Msa0329700:three_prime_UTR 55.0%
! CATGACCATTGGTGGCCGTA+TGG - chr2_4:43569873-43569892 None:intergenic 55.0%
GACGCCCTACACCAACCGTA+AGG - chr2_4:43567563-43567582 None:intergenic 60.0%
! GTAGGGCGTCACTCAGATGC+AGG + chr2_4:43567573-43567592 Msa0329700:CDS 60.0%
!! ACCCGAGGGAGTGTCTCAAG+AGG + chr2_4:43569654-43569673 Msa0329700:three_prime_UTR 60.0%
GCCTCTTGAGACACTCCCTC+GGG - chr2_4:43569658-43569677 None:intergenic 60.0%
CAGCTGTCTCCGTGCTGTCA+AGG + chr2_4:43569822-43569841 Msa0329700:three_prime_UTR 60.0%
GCTGTCTCCGTGCTGTCAAG+GGG + chr2_4:43569824-43569843 Msa0329700:three_prime_UTR 60.0%
TGCTCCCATACGGCCACCAA+TGG + chr2_4:43569865-43569884 Msa0329700:three_prime_UTR 60.0%
CAGCCGTGTGCGTCTTGCAT+AGG + chr2_4:43570004-43570023 Msa0329700:three_prime_UTR 60.0%
Chromosome Type Strat End Strand Name
chr2_4 gene 43566450 43570136 43566450 ID=Msa0329700;Name=Msa0329700
chr2_4 mRNA 43566450 43570136 43566450 ID=Msa0329700-mRNA-1;Parent=Msa0329700;Name=Msa0329700-mRNA-1;_AED=0.27;_eAED=0.27;_QI=33|1|1|1|1|1|3|848|364
chr2_4 exon 43566450 43566982 43566450 ID=Msa0329700-mRNA-1:exon:13246;Parent=Msa0329700-mRNA-1
chr2_4 exon 43567395 43567737 43567395 ID=Msa0329700-mRNA-1:exon:13247;Parent=Msa0329700-mRNA-1
chr2_4 exon 43569037 43570136 43569037 ID=Msa0329700-mRNA-1:exon:13248;Parent=Msa0329700-mRNA-1
chr2_4 five_prime_UTR 43566450 43566482 43566450 ID=Msa0329700-mRNA-1:five_prime_utr;Parent=Msa0329700-mRNA-1
chr2_4 CDS 43566483 43566982 43566483 ID=Msa0329700-mRNA-1:cds;Parent=Msa0329700-mRNA-1
chr2_4 CDS 43567395 43567737 43567395 ID=Msa0329700-mRNA-1:cds;Parent=Msa0329700-mRNA-1
chr2_4 CDS 43569037 43569288 43569037 ID=Msa0329700-mRNA-1:cds;Parent=Msa0329700-mRNA-1
chr2_4 three_prime_UTR 43569289 43570136 43569289 ID=Msa0329700-mRNA-1:three_prime_utr;Parent=Msa0329700-mRNA-1
Gene Sequence

>Msa0329700

ATGGCTCAAATTTCCAACACTTCAAATTCATTGTACAACTTTATTGTAAGAGATGGCAATGGAATCAAAGGCTTAGTAGATTCAGGTTTATTAGAGGTTCCAAAAATGTACATACAACCCATAAATGAAAGAATCAACAAACTAGACACAAAACCATGTGATATACCACCAATTGACTTATCAAAGCTCAATGGAAAAGAACATGAAAAAGTGGTGAATGAGATTGTTAGAGCAGCAGAAACTCTTGGATTCTTTCAAGTAGTGAATCATTGTGTTCCTTTGGAGTTATTGGAATCAGTTAAAGATTCAACACATGCATTTTTCAATATGCCACCAGAGAAAAAAGTTGTTTACCGACAAAATGTGAGTACAAGTTTAAAGATGAGATATCAAACTAGTTTTGCTCCTGAGATAGAAAATGTGTTGGAATGGAAAGATTATATCAATATGGTATATAGTAGTGATGAAGATGCTCTTCAATATTGGCCTAATGAGTGCAAGGATGTTGCACTTGAATATTTGAAGTTATCATCCAAGATAGTTAAAGACATTTTGGAAATACTAATTGGTAAGCTAGGAGTGGAATTAGATGACTCAAAAATTGAGAGTCTAATTGGTTTGAAAATGGTTAACATGAACTACTACCCAGCATGCCCAAATCCAGACCTTACGGTTGGTGTAGGGCGTCACTCAGATGCAGGGACTATCACAGTGCTTCTTCAAGATGGAATTGGTGGCTTATATGTCAAAGCTGAGGATGAGAATGATGTTGGCAAAGTAGAGTGGCTTGAAATTTCACCAATACCTGGAGCTTTAGTCATCAATGTTGGTGATGCTTTAGAGATACTAAGCAATGGGAAGTACAAGAGTTCTGAACACCGAGTCATGACAACTTCAAGCCAATCCAGAGTATCAGTTCCATTGTTCACTCTACCCAAATTTACAGAGAAGATTGGCCCATTACCAGAATTAGTGAAGAAAGATGGATCGGCTGGTTATAGAGAAGTCTTGTGGCAGGATTACATGGACAACTTCTATGGGGTTGCTCATGAAGGAAAGAAGACTCTTAATTTTGCCAAGATCAACTCTAGTTAA
Protein sequence

>Msa0329700

MAQISNTSNSLYNFIVRDGNGIKGLVDSGLLEVPKMYIQPINERINKLDTKPCDIPPIDLSKLNGKEHEKVVNEIVRAAETLGFFQVVNHCVPLELLESVKDSTHAFFNMPPEKKVVYRQNVSTSLKMRYQTSFAPEIENVLEWKDYINMVYSSDEDALQYWPNECKDVALEYLKLSSKIVKDILEILIGKLGVELDDSKIESLIGLKMVNMNYYPACPNPDLTVGVGRHSDAGTITVLLQDGIGGLYVKAEDENDVGKVEWLEISPIPGALVINVGDALEILSNGKYKSSEHRVMTTSSQSRVSVPLFTLPKFTEKIGPLPELVKKDGSAGYREVLWQDYMDNFYGVAHEGKKTLNFAKINSS*