Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0214720 | XP_003596358.2 | 88.745 | 542 | 27 | 7 | 1 | 516 | 1 | 534 | 0.0 | 880 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0214720 | A0A396J9V5 | 88.745 | 542 | 27 | 7 | 1 | 516 | 1 | 534 | 0.0 | 880 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0214720 | Msa0255090 | 0.838956 | 2.112654e-57 | -8.615850e-47 |
| Msa0214720 | Msa0259380 | 0.835125 | 2.012462e-56 | -8.615850e-47 |
| Msa0214720 | Msa0294160 | 0.830476 | 2.875155e-55 | -8.615850e-47 |
| Msa0214720 | Msa0349710 | 0.806850 | 6.733680e-50 | -8.615850e-47 |
| Msa0214720 | Msa1282260 | 0.803419 | 3.517823e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0214720 | MtrunA17_Chr2g0315751 | 88.745 | 542 | 27 | 7 | 1 | 516 | 1 | 534 | 0.0 | 880 |
| Msa0214720 | MtrunA17_Chr6g0472321 | 54.023 | 87 | 39 | 1 | 392 | 477 | 186 | 272 | 7.34e-22 | 97.1 |
| Msa0214720 | MtrunA17_Chr6g0472321 | 47.115 | 104 | 51 | 2 | 170 | 272 | 186 | 286 | 1.85e-20 | 93.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0214720 | AT1G78810.2 | 32.331 | 399 | 206 | 8 | 90 | 486 | 108 | 444 | 6.01e-57 | 197 |
| Msa0214720 | AT1G78810.2 | 38.037 | 163 | 98 | 2 | 308 | 469 | 105 | 265 | 1.10e-30 | 125 |
| Msa0214720 | AT1G78810.3 | 32.331 | 399 | 206 | 8 | 90 | 486 | 108 | 444 | 6.01e-57 | 197 |
| Msa0214720 | AT1G78810.3 | 38.037 | 163 | 98 | 2 | 308 | 469 | 105 | 265 | 1.10e-30 | 125 |
| Msa0214720 | AT1G78810.1 | 32.331 | 399 | 206 | 8 | 90 | 486 | 108 | 444 | 7.10e-57 | 197 |
| Msa0214720 | AT1G78810.1 | 38.037 | 163 | 98 | 2 | 308 | 469 | 105 | 265 | 1.12e-30 | 125 |
Find 137 sgRNAs with CRISPR-Local
Find 304 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCATTATCATTGGGTTTA+AGG | 0.083244 | 2_1:+59311460 | None:intergenic |
| GAAAATGTGGAAGAGGTTTA+AGG | 0.178260 | 2_1:-59307737 | Msa0214720:CDS |
| GAAAATGTGGAAGAGGTTTA+AGG | 0.178260 | 2_1:-59309172 | Msa0214720:CDS |
| CATATTTAATCCATTCATTT+TGG | 0.178509 | 2_1:+59307261 | None:intergenic |
| CTGCGGTTTCTGATGCTAAA+TGG | 0.188130 | 2_1:-59309569 | Msa0214720:CDS |
| CATGCTGTTCTTCACAATAT+TGG | 0.227270 | 2_1:-59307223 | Msa0214720:three_prime_UTR |
| ATGCTGTTCTTCACAATATT+GGG | 0.247733 | 2_1:-59307222 | Msa0214720:three_prime_UTR |
| CAAAATGAATGGATTAAATA+TGG | 0.256022 | 2_1:-59307260 | Msa0214720:three_prime_UTR |
| CTTCGGGAGCTAAGAACTTT+TGG | 0.271254 | 2_1:+59307971 | None:intergenic |
| TCGTTCCCCACAAGAGAATA+AGG | 0.274444 | 2_1:+59308045 | None:intergenic |
| TTCAGTTCCAGTTGAGCTTC+AGG | 0.287848 | 2_1:-59311439 | Msa0214720:CDS |
| AACAGCTTCGAGGGAGCTTT+TGG | 0.297071 | 2_1:-59308998 | Msa0214720:intron |
| AGGAGCTTGTTTGCAGTCTT+AGG | 0.301072 | 2_1:-59307198 | Msa0214720:three_prime_UTR |
| ATCATTATCATTGGGTTTAA+GGG | 0.307730 | 2_1:+59311461 | None:intergenic |
| GACACAAAATAATAGTAAAA+AGG | 0.315354 | 2_1:+59307056 | None:intergenic |
| TAATCCTGTTGATGACAATT+AGG | 0.323413 | 2_1:-59307305 | Msa0214720:exon |
| CATCGGGAGCTAAGAACTTT+TGG | 0.328140 | 2_1:+59309412 | None:intergenic |
| AGCAGCTTCAAGGAAGCTTT+TGG | 0.330083 | 2_1:-59307566 | Msa0214720:intron |
| GGATTATCTTCAACAACTTC+AGG | 0.332801 | 2_1:-59308102 | Msa0214720:CDS |
| GCATGATCCTGAAGCTCAAC+TGG | 0.357402 | 2_1:+59311432 | None:intergenic |
| TGGAACTGAATCATTATCAT+TGG | 0.363030 | 2_1:+59311452 | None:intergenic |
| GAGAGAGTGAGAGTTTGAAT+TGG | 0.365860 | 2_1:+59311663 | None:intergenic |
| ATGGATTAAATATGGTTTGT+AGG | 0.372698 | 2_1:-59307252 | Msa0214720:three_prime_UTR |
| ATTCGCAGCCGCAGGTTTCT+CGG | 0.373500 | 2_1:+59307447 | None:intergenic |
| TTGGGTCTGAGTTCAGAAAA+TGG | 0.375681 | 2_1:-59310747 | Msa0214720:CDS |
| GTTACCAGCTATTGTGTTGA+AGG | 0.381631 | 2_1:-59309037 | Msa0214720:CDS |
| TCTTACCCTTATTCTCTTGT+GGG | 0.382075 | 2_1:-59309492 | Msa0214720:CDS |
| CCAGATGGTGAATTATCTTC+AGG | 0.382414 | 2_1:-59309534 | Msa0214720:CDS |
| GCTTCAACAAACTGTTACTA+AGG | 0.384254 | 2_1:-59311403 | Msa0214720:intron |
| TTCTTACCCTTATTCTCTTG+TGG | 0.385665 | 2_1:-59308052 | Msa0214720:CDS |
| TGTGGTTTCTGATGCTGAAT+GGG | 0.387056 | 2_1:-59308145 | Msa0214720:CDS |
| TCTTACCCTTATTCTCTTGT+GGG | 0.389075 | 2_1:-59308051 | Msa0214720:CDS |
| CTGTGGTTTCTGATGCTGAA+TGG | 0.389876 | 2_1:-59308146 | Msa0214720:CDS |
| TTCTTACCCTTATTCTCTTG+TGG | 0.394000 | 2_1:-59309493 | Msa0214720:CDS |
| TGAAGATGAAGAGGAGGATG+AGG | 0.395179 | 2_1:-59309355 | Msa0214720:CDS |
| ATCAGAAACCGCAGATTCAT+TGG | 0.399717 | 2_1:+59309578 | None:intergenic |
| CACGGTGAGATTACTGACTA+TGG | 0.401443 | 2_1:-59306982 | Msa0214720:three_prime_UTR |
| GAATTGGTGAGGAAGGTGTT+AGG | 0.404853 | 2_1:+59311679 | None:intergenic |
| TGCGGTTTCTGATGCTAAAT+GGG | 0.405883 | 2_1:-59309568 | Msa0214720:CDS |
| GTTACCAACTATTGTGTTGA+AGG | 0.406576 | 2_1:-59307602 | Msa0214720:CDS |
| TTGATTCCTCAGCAGCTTCA+AGG | 0.423042 | 2_1:-59307576 | Msa0214720:CDS |
| ACATCCTAATTGTCATCAAC+AGG | 0.429381 | 2_1:+59307301 | None:intergenic |
| ACTATGAAAGTGATACTTAC+CGG | 0.429530 | 2_1:-59307016 | Msa0214720:three_prime_UTR |
| GGAACTGAATCATTATCATT+GGG | 0.438391 | 2_1:+59311453 | None:intergenic |
| GATGAAGGTGAAGATGAGTT+TGG | 0.438508 | 2_1:-59307898 | Msa0214720:CDS |
| TGGATTAAATATGGTTTGTA+GGG | 0.448341 | 2_1:-59307251 | Msa0214720:three_prime_UTR |
| TGCTGAAGATGTTGGCTTGA+GGG | 0.452073 | 2_1:-59307824 | Msa0214720:CDS |
| TTATAGAACAATGCTGATGC+TGG | 0.458175 | 2_1:-59311495 | Msa0214720:intron |
| TCACTGTCAGAACCAACTTC+GGG | 0.460153 | 2_1:+59307955 | None:intergenic |
| GAGAAATGAGAAAGTGAAGC+TGG | 0.462206 | 2_1:+59311729 | None:intergenic |
| CGTCTGTAAAATTGTTGGTT+GGG | 0.464214 | 2_1:-59307635 | Msa0214720:CDS |
| AAATCCTTCAACACAATAGT+TGG | 0.467348 | 2_1:+59307598 | None:intergenic |
| TTCGCAGCCGCAGGTTTCTC+GGG | 0.467970 | 2_1:+59307448 | None:intergenic |
| AGAACATGGTTTGGTGTTGA+AGG | 0.472039 | 2_1:+59308071 | None:intergenic |
| ATCACTGTCAGAACCAACTT+CGG | 0.474727 | 2_1:+59307954 | None:intergenic |
| CGTCTGTAAAGTTGTTGGTT+GGG | 0.475945 | 2_1:-59309070 | Msa0214720:CDS |
| CATGGTTTGGTGTTGAAGGC+CGG | 0.483188 | 2_1:+59308075 | None:intergenic |
| AAATCCTTCAACACAATAGC+TGG | 0.483908 | 2_1:+59309033 | None:intergenic |
| AGTGAGAGTTTGAATTGGTG+AGG | 0.486237 | 2_1:+59311668 | None:intergenic |
| TCAACATCATTCGCAGCCGC+AGG | 0.497856 | 2_1:+59307439 | None:intergenic |
| CCTGAAGATAATTCACCATC+TGG | 0.499284 | 2_1:+59309534 | None:intergenic |
| CTGCTGTACTAAGGACGAAA+AGG | 0.499574 | 2_1:-59307687 | Msa0214720:CDS |
| AAGGATGGTGAGATTCAAGA+TGG | 0.504558 | 2_1:-59310777 | Msa0214720:CDS |
| ATCTCTTAGTAGTTAGTGCA+AGG | 0.506103 | 2_1:+59307167 | None:intergenic |
| GTTGAAGATAATCCACCATC+AGG | 0.508474 | 2_1:+59308111 | None:intergenic |
| TCGTCTGTAAAGTTGTTGGT+TGG | 0.509226 | 2_1:-59309071 | Msa0214720:CDS |
| CAAATCGTCTGTAAAGTTGT+TGG | 0.511474 | 2_1:-59309075 | Msa0214720:CDS |
| GAAAGTGAAGCCAAAATGAA+TGG | 0.512230 | 2_1:-59307271 | Msa0214720:three_prime_UTR |
| TTAAGAAGAAAATGTGGAAG+AGG | 0.512472 | 2_1:-59307744 | Msa0214720:CDS |
| TTAAGAAGAAAATGTGGAAG+AGG | 0.512472 | 2_1:-59309179 | Msa0214720:CDS |
| TTCAACAACTTCAGGATGGC+CGG | 0.512479 | 2_1:-59308094 | Msa0214720:CDS |
| CAAGTCGTCTGTAAAATTGT+TGG | 0.514580 | 2_1:-59307640 | Msa0214720:CDS |
| CGAAAAGGATGCGAGCTCAC+AGG | 0.516813 | 2_1:-59309107 | Msa0214720:CDS |
| CTACTGTACTAAGGACGAAA+AGG | 0.517368 | 2_1:-59309122 | Msa0214720:CDS |
| ATTCCTCCTCAACAGCTTCG+AGG | 0.517918 | 2_1:-59309008 | Msa0214720:CDS |
| GAGATTACTGACTATGGTTA+CGG | 0.518739 | 2_1:-59306976 | Msa0214720:three_prime_UTR |
| ATAAGGGTAAGAACATGGTT+TGG | 0.519095 | 2_1:+59308062 | None:intergenic |
| TCGTCTGTAAAATTGTTGGT+TGG | 0.521628 | 2_1:-59307636 | Msa0214720:CDS |
| CGTTCCCCACAAGAGAATAA+GGG | 0.522813 | 2_1:+59308046 | None:intergenic |
| AGCATTCAACTGCTGTACTA+AGG | 0.523950 | 2_1:-59307696 | Msa0214720:CDS |
| TTCCTCCTCAACAGCTTCGA+GGG | 0.527626 | 2_1:-59309007 | Msa0214720:CDS |
| TTTCGTCCTTAGTACAGTAG+TGG | 0.528949 | 2_1:+59309125 | None:intergenic |
| CGAAAAGGAAGCGAGCTCAC+AGG | 0.538714 | 2_1:-59307672 | Msa0214720:CDS |
| AAGTTCTTAGCTCCCGAAGT+TGG | 0.540001 | 2_1:-59307967 | Msa0214720:CDS |
| AGCATTCCACTACTGTACTA+AGG | 0.540686 | 2_1:-59309131 | Msa0214720:CDS |
| GAAGATGAGGATGAGGATGA+AGG | 0.542015 | 2_1:-59307913 | Msa0214720:CDS |
| GGATGAAAGTGAAGATGAGT+TGG | 0.543518 | 2_1:-59309334 | Msa0214720:CDS |
| AGAGTTTGAATTGGTGAGGA+AGG | 0.544908 | 2_1:+59311672 | None:intergenic |
| CTTACCCTTATTCTCTTGTG+GGG | 0.545295 | 2_1:-59309491 | Msa0214720:CDS |
| AAGCTCCCTCGAAGCTGTTG+AGG | 0.545942 | 2_1:+59309002 | None:intergenic |
| CAGATGGTGAATTATCTTCA+GGG | 0.548915 | 2_1:-59309533 | Msa0214720:CDS |
| GAAAAGGATGCGAGCTCACA+GGG | 0.552039 | 2_1:-59309106 | Msa0214720:CDS |
| TTACCCTTATTCTCTTGTGG+GGG | 0.552408 | 2_1:-59309490 | Msa0214720:CDS |
| TCGCTGTCAGAACCAACATC+GGG | 0.556636 | 2_1:+59309396 | None:intergenic |
| CTTACCCTTATTCTCTTGTG+GGG | 0.563903 | 2_1:-59308050 | Msa0214720:CDS |
| TCAACATCACTCGCAGCAGC+AGG | 0.565239 | 2_1:+59308871 | None:intergenic |
| GAAAAGGAAGCGAGCTCACA+GGG | 0.567524 | 2_1:-59307671 | Msa0214720:CDS |
| TGAAGATGAAGATGAAGAGG+AGG | 0.567889 | 2_1:-59309361 | Msa0214720:CDS |
| AAGCTTCCTTGAAGCTGCTG+AGG | 0.568779 | 2_1:+59307570 | None:intergenic |
| TGAAGATGAAGATGAGGATG+AGG | 0.569285 | 2_1:-59307920 | Msa0214720:CDS |
| TATTGAAGATGAAGATGAAG+AGG | 0.569364 | 2_1:-59309364 | Msa0214720:CDS |
| ATCGCTGTCAGAACCAACAT+CGG | 0.576903 | 2_1:+59309395 | None:intergenic |
| ACGATGCTTAAAATTGCAAG+TGG | 0.588629 | 2_1:-59307100 | Msa0214720:three_prime_UTR |
| CTCCCTCGAAGCTGTTGAGG+AGG | 0.593342 | 2_1:+59309005 | None:intergenic |
| AAGTTCTTAGCTCCCGATGT+TGG | 0.594788 | 2_1:-59309408 | Msa0214720:CDS |
| AAAGTGTTCGCTGAAGATGC+TGG | 0.595637 | 2_1:-59309267 | Msa0214720:CDS |
| TCACCGTGTCGCATTCCCAC+CGG | 0.597259 | 2_1:+59306997 | None:intergenic |
| TCTCTTAGTAGTTAGTGCAA+GGG | 0.598520 | 2_1:+59307168 | None:intergenic |
| TTGCTGAAGATGTTGGCTTG+AGG | 0.599340 | 2_1:-59307825 | Msa0214720:CDS |
| TGGGTTTGCAAAAGTCCAGA+TGG | 0.610274 | 2_1:-59309549 | Msa0214720:CDS |
| TGCTGTTCTTCACAATATTG+GGG | 0.611985 | 2_1:-59307221 | Msa0214720:three_prime_UTR |
| TCGCTGAAGATGCTGGCTTG+AGG | 0.620018 | 2_1:-59309260 | Msa0214720:CDS |
| GTAGGTAACTCATGAATCTG+TGG | 0.623545 | 2_1:-59308163 | Msa0214720:intron |
| TTATTCTCTTGTGGGGAACG+AGG | 0.629352 | 2_1:-59308043 | Msa0214720:CDS |
| GTGGTGTTAAGAAGAAAATG+TGG | 0.629707 | 2_1:-59307750 | Msa0214720:CDS |
| GTGGTGTTAAGAAGAAAATG+TGG | 0.629707 | 2_1:-59309185 | Msa0214720:CDS |
| AATATTGTGAAGAACAGCAT+GGG | 0.639718 | 2_1:+59307225 | None:intergenic |
| AAATGGAGGAGAATTAGTTG+AGG | 0.641746 | 2_1:-59310730 | Msa0214720:intron |
| CAATATTGTGAAGAACAGCA+TGG | 0.642297 | 2_1:+59307224 | None:intergenic |
| TACGAGAACAATAGTAAACA+AGG | 0.643032 | 2_1:-59309231 | Msa0214720:CDS |
| AAAGTGTTTGCTGAAGATGT+TGG | 0.647008 | 2_1:-59307832 | Msa0214720:CDS |
| GATTACTGAATCATCATCTG+AGG | 0.648513 | 2_1:-59311622 | Msa0214720:intron |
| TATCTTCAACAACTTCAGGA+TGG | 0.648539 | 2_1:-59308098 | Msa0214720:CDS |
| TGGGTTTGCAAAAGTCCTGA+TGG | 0.652543 | 2_1:-59308126 | Msa0214720:CDS |
| TTACCGGTGGGAATGCGACA+CGG | 0.653909 | 2_1:-59307000 | Msa0214720:three_prime_UTR |
| TGTTATTGAAGATGAAGATG+AGG | 0.654393 | 2_1:-59307926 | Msa0214720:CDS |
| ATGAAAGTGATACTTACCGG+TGG | 0.655296 | 2_1:-59307013 | Msa0214720:three_prime_UTR |
| AGAGAATAAGGGTAAGAACA+TGG | 0.658460 | 2_1:+59308057 | None:intergenic |
| AGAGAATAAGGGTAAGAACA+TGG | 0.658460 | 2_1:+59309498 | None:intergenic |
| TGTTCTTCACAATATTGGGG+AGG | 0.661417 | 2_1:-59307218 | Msa0214720:three_prime_UTR |
| GTAGGTAACCAATGAATCTG+CGG | 0.663446 | 2_1:-59309586 | Msa0214720:intron |
| TGAAAGTGATACTTACCGGT+GGG | 0.664186 | 2_1:-59307012 | Msa0214720:three_prime_UTR |
| GGCTGAACCCGAGAAACCTG+CGG | 0.683846 | 2_1:-59307455 | Msa0214720:CDS |
| GTTTGCAAAAGTCCTGATGG+TGG | 0.690415 | 2_1:-59308123 | Msa0214720:CDS |
| AGTTGGTTCTGACAGTGATG+AGG | 0.694565 | 2_1:-59307950 | Msa0214720:CDS |
| ATGGTGAATTATCTTCAGGG+TGG | 0.723822 | 2_1:-59309530 | Msa0214720:CDS |
| GGTCTGAGTTCAGAAAATGG+AGG | 0.770712 | 2_1:-59310744 | Msa0214720:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTATTTTTTTTTTTTTAATC+CGG | + | chr2_1:59307772-59307791 | None:intergenic | 10.0% |
| !! | TTTACAAAATAGTAATTATT+TGG | - | chr2_1:59308590-59308609 | Msa0214720:intron | 10.0% |
| !! | TTACAAAATAGTAATTATTT+GGG | - | chr2_1:59308591-59308610 | Msa0214720:intron | 10.0% |
| !! | AATAAAAATTTAAATTGACA+AGG | + | chr2_1:59309906-59309925 | None:intergenic | 10.0% |
| !!! | TCATTTTCGTAAATTATTAT+AGG | - | chr2_1:59307580-59307599 | Msa0214720:CDS | 15.0% |
| !! | TAGATTATAATAGTGAAAAT+CGG | - | chr2_1:59307648-59307667 | Msa0214720:CDS | 15.0% |
| !!! | AATTTGAAAAATGGATTAAT+TGG | - | chr2_1:59308146-59308165 | Msa0214720:CDS | 15.0% |
| !! | TTTAAATAAATAGAGAAGTT+AGG | - | chr2_1:59308564-59308583 | Msa0214720:intron | 15.0% |
| !!! | ACTATTTTCACATATTTTTT+TGG | - | chr2_1:59308899-59308918 | Msa0214720:intron | 15.0% |
| !!! | TTTTAATGGAATTTTAATGT+AGG | - | chr2_1:59309070-59309089 | Msa0214720:CDS | 15.0% |
| !! | AAGTGAATAAAGTTTGATTA+AGG | + | chr2_1:59307108-59307127 | None:intergenic | 20.0% |
| !! | AGTTAAAATCATATGAAACA+AGG | + | chr2_1:59307159-59307178 | None:intergenic | 20.0% |
| !! | TTATGAGATAAATAATTGAG+AGG | - | chr2_1:59307425-59307444 | Msa0214720:intron | 20.0% |
| !!! | TCCATTTTTCAAATTTTTAC+CGG | + | chr2_1:59308141-59308160 | None:intergenic | 20.0% |
| !!! | AAATAGTAATTATTTGGGAT+CGG | - | chr2_1:59308596-59308615 | Msa0214720:intron | 20.0% |
| !! | TAAATGTTAGTATTGTTAGT+AGG | - | chr2_1:59308936-59308955 | Msa0214720:intron | 20.0% |
| !! | AAATGTTAGTATTGTTAGTA+GGG | - | chr2_1:59308937-59308956 | Msa0214720:intron | 20.0% |
| !!! | TTCTGAATTCTGTTTTTTAA+TGG | - | chr2_1:59309056-59309075 | Msa0214720:CDS | 20.0% |
| !! | AGTATATGATACTTACATTT+CGG | + | chr2_1:59309832-59309851 | None:intergenic | 20.0% |
| !!! | TAATCTCTTATTATTTTCTC+TGG | - | chr2_1:59309877-59309896 | Msa0214720:intron | 20.0% |
| !! | ATTCCAATTTGCAAAAAAAT+TGG | + | chr2_1:59310226-59310245 | None:intergenic | 20.0% |
| !! | TACTAATGAAATATCAATGT+AGG | - | chr2_1:59310493-59310512 | Msa0214720:intron | 20.0% |
| !!! | AAAAGGAGATTTTTATTGTT+TGG | - | chr2_1:59310895-59310914 | Msa0214720:intron | 20.0% |
| !! | CAACATAATTAGCAATAATA+AGG | + | chr2_1:59311185-59311204 | None:intergenic | 20.0% |
| !!! | CATATTTAATCCATTCATTT+TGG | + | chr2_1:59311416-59311435 | None:intergenic | 20.0% |
| !!! | CAAAATGAATGGATTAAATA+TGG | - | chr2_1:59311414-59311433 | Msa0214720:CDS | 20.0% |
| !! | ATAATAGTAAAAAGGAACAT+GGG | + | chr2_1:59311613-59311632 | None:intergenic | 20.0% |
| !! | AATAATAGTAAAAAGGAACA+TGG | + | chr2_1:59311614-59311633 | None:intergenic | 20.0% |
| !! | GACACAAAATAATAGTAAAA+AGG | + | chr2_1:59311621-59311640 | None:intergenic | 20.0% |
| !!! | TTTTACTATTATTTTGTGTC+TGG | - | chr2_1:59311621-59311640 | Msa0214720:intron | 20.0% |
| ! | ATCATTATCATTGGGTTTAA+GGG | + | chr2_1:59307216-59307235 | None:intergenic | 25.0% |
| ! | AATCATTATCATTGGGTTTA+AGG | + | chr2_1:59307217-59307236 | None:intergenic | 25.0% |
| !!! | ATAATTGAGAGGTTTTTTCT+TGG | - | chr2_1:59307436-59307455 | Msa0214720:CDS | 25.0% |
| !!! | GAAATAAACTGATTTGAGTT+TGG | - | chr2_1:59307477-59307496 | Msa0214720:intron | 25.0% |
| ! | ATTCAAGATGGAAAAACATT+GGG | - | chr2_1:59307909-59307928 | Msa0214720:CDS | 25.0% |
| ! | TTAGTTGAGGTAAAACAATT+TGG | - | chr2_1:59307957-59307976 | Msa0214720:CDS | 25.0% |
| ! | ACCGGTAAAAATTTGAAAAA+TGG | - | chr2_1:59308137-59308156 | Msa0214720:CDS | 25.0% |
| !! | ATGTAAGACATTTCATTTTC+TGG | - | chr2_1:59308345-59308364 | Msa0214720:intron | 25.0% |
| !! | TCTATGATTTGGAAAATCAA+GGG | + | chr2_1:59308798-59308817 | None:intergenic | 25.0% |
| !! | ATCTATGATTTGGAAAATCA+AGG | + | chr2_1:59308799-59308818 | None:intergenic | 25.0% |
| !!! | TTTTTTTGGAACGAGTAAAA+AGG | - | chr2_1:59308913-59308932 | Msa0214720:intron | 25.0% |
| !! | ACAAGGAGATTTTTATTGTT+TGG | - | chr2_1:59309460-59309479 | Msa0214720:CDS | 25.0% |
| !!! | GATTTTTATTGTTTGGTTTG+TGG | - | chr2_1:59309467-59309486 | Msa0214720:CDS | 25.0% |
| ! | CAATCTAATAAGCAAAAATG+AGG | + | chr2_1:59309753-59309772 | None:intergenic | 25.0% |
| !!! | TAGATTGTATTGATTTTTGC+AGG | - | chr2_1:59309766-59309785 | Msa0214720:intron | 25.0% |
| ! | TATTATATGTGCATGTTTCT+TGG | - | chr2_1:59309922-59309941 | Msa0214720:intron | 25.0% |
| ! | ACTGAATTATCTGTATTGTA+TGG | - | chr2_1:59310018-59310037 | Msa0214720:intron | 25.0% |
| ! | TAGAATTAACCAGAAAATGA+AGG | + | chr2_1:59310066-59310085 | None:intergenic | 25.0% |
| !!! | ACTCCAATTTTTTTGCAAAT+TGG | - | chr2_1:59310220-59310239 | Msa0214720:intron | 25.0% |
| ! | AAAACATCAAAGAGAATCAT+GGG | + | chr2_1:59310464-59310483 | None:intergenic | 25.0% |
| ! | TAAAACATCAAAGAGAATCA+TGG | + | chr2_1:59310465-59310484 | None:intergenic | 25.0% |
| ! | TACGAGAACAATAGTAAAAA+AGG | - | chr2_1:59310878-59310897 | Msa0214720:intron | 25.0% |
| !!! | GATTTTTATTGTTTGGTTTG+TGG | - | chr2_1:59309467-59309486 | Msa0214720:CDS | 25.0% |
| ! | ATTGTATGTCAGATGTAATT+TGG | - | chr2_1:59311289-59311308 | Msa0214720:intron | 25.0% |
| !! | ATGGATTAAATATGGTTTGT+AGG | - | chr2_1:59311422-59311441 | Msa0214720:CDS | 25.0% |
| !! | TGGATTAAATATGGTTTGTA+GGG | - | chr2_1:59311423-59311442 | Msa0214720:CDS | 25.0% |
| ! | TAATAGTAAAAAGGAACATG+GGG | + | chr2_1:59311612-59311631 | None:intergenic | 25.0% |
| GGAACTGAATCATTATCATT+GGG | + | chr2_1:59307224-59307243 | None:intergenic | 30.0% | |
| TGGAACTGAATCATTATCAT+TGG | + | chr2_1:59307225-59307244 | None:intergenic | 30.0% | |
| ! | AGTTTCACTTTACCCTTTTA+TGG | - | chr2_1:59307333-59307352 | Msa0214720:intron | 30.0% |
| ! | GTTTCACTTTACCCTTTTAT+GGG | - | chr2_1:59307334-59307353 | Msa0214720:intron | 30.0% |
| ! | TACCCTTTTATGGGTTTAAA+TGG | - | chr2_1:59307343-59307362 | Msa0214720:intron | 30.0% |
| ! | ACCCTTTTATGGGTTTAAAT+GGG | - | chr2_1:59307344-59307363 | Msa0214720:intron | 30.0% |
| ACCCATTTAAACCCATAAAA+GGG | + | chr2_1:59307348-59307367 | None:intergenic | 30.0% | |
| AACCCATTTAAACCCATAAA+AGG | + | chr2_1:59307349-59307368 | None:intergenic | 30.0% | |
| TTACAAAAGCTCAAAGAAAC+CGG | - | chr2_1:59307750-59307769 | Msa0214720:CDS | 30.0% | |
| GATTCAAGATGGAAAAACAT+TGG | - | chr2_1:59307908-59307927 | Msa0214720:CDS | 30.0% | |
| !!! | GTAATCACATGTTTTGATGT+CGG | - | chr2_1:59308171-59308190 | Msa0214720:intron | 30.0% |
| ! | GTGTGTCTAATTGATAATCT+AGG | - | chr2_1:59308318-59308337 | Msa0214720:intron | 30.0% |
| ! | TGTATCCCTTTTATTCTGTT+AGG | - | chr2_1:59308466-59308485 | Msa0214720:intron | 30.0% |
| AGAGACCTAACAGAATAAAA+GGG | + | chr2_1:59308474-59308493 | None:intergenic | 30.0% | |
| AAGAGACCTAACAGAATAAA+AGG | + | chr2_1:59308475-59308494 | None:intergenic | 30.0% | |
| GAAAACGATTCACAAAACAA+AGG | + | chr2_1:59308746-59308765 | None:intergenic | 30.0% | |
| GTCACATTCATGACTATTAT+TGG | - | chr2_1:59308829-59308848 | Msa0214720:intron | 30.0% | |
| TGAATCATCTCTGATAATCA+GGG | + | chr2_1:59309035-59309054 | None:intergenic | 30.0% | |
| TATTGAAGATGAAGATGAAG+AGG | - | chr2_1:59309310-59309329 | Msa0214720:CDS | 30.0% | |
| TACGAGAACAATAGTAAACA+AGG | - | chr2_1:59309443-59309462 | Msa0214720:CDS | 30.0% | |
| !!! | TTTTATTGTTTGGTTTGTGG+TGG | - | chr2_1:59309470-59309489 | Msa0214720:CDS | 30.0% |
| TTAAGAAGAAAATGTGGAAG+AGG | - | chr2_1:59309495-59309514 | Msa0214720:CDS | 30.0% | |
| ! | ATGTAAGATCCTTCATTTTC+TGG | - | chr2_1:59310054-59310073 | Msa0214720:intron | 30.0% |
| AAGTGTTATCTCTTCATTCA+TGG | - | chr2_1:59310166-59310185 | Msa0214720:intron | 30.0% | |
| AGTGTTATCTCTTCATTCAT+GGG | - | chr2_1:59310167-59310186 | Msa0214720:intron | 30.0% | |
| TCTTCATTCATGGGTATTAT+TGG | - | chr2_1:59310176-59310195 | Msa0214720:intron | 30.0% | |
| CAATACATACTACTATTCCT+CGG | + | chr2_1:59310251-59310270 | None:intergenic | 30.0% | |
| GGAATAGTAGTATGTATTGT+TGG | - | chr2_1:59310252-59310271 | Msa0214720:intron | 30.0% | |
| TAGTAACTTAGTGTTATGTC+AGG | - | chr2_1:59310353-59310372 | Msa0214720:intron | 30.0% | |
| AGTTAAAGAGTGAAGTGATA+AGG | + | chr2_1:59310410-59310429 | None:intergenic | 30.0% | |
| AAGAGAATCATGGGATATAA+GGG | + | chr2_1:59310455-59310474 | None:intergenic | 30.0% | |
| AAAGAGAATCATGGGATATA+AGG | + | chr2_1:59310456-59310475 | None:intergenic | 30.0% | |
| TGTTATTGAAGATGAAGATG+AGG | - | chr2_1:59309307-59309326 | Msa0214720:CDS | 30.0% | |
| !!! | TTTTATTGTTTGGTTTGTGG+TGG | - | chr2_1:59309470-59309489 | Msa0214720:CDS | 30.0% |
| TTAAGAAGAAAATGTGGAAG+AGG | - | chr2_1:59309495-59309514 | Msa0214720:CDS | 30.0% | |
| AAATCCTTCAACACAATAGT+TGG | + | chr2_1:59311079-59311098 | None:intergenic | 30.0% | |
| !! | TAATCCTGTTGATGACAATT+AGG | - | chr2_1:59311369-59311388 | Msa0214720:intron | 30.0% |
| AATATTGTGAAGAACAGCAT+GGG | + | chr2_1:59311452-59311471 | None:intergenic | 30.0% | |
| ATGCTGTTCTTCACAATATT+GGG | - | chr2_1:59311452-59311471 | Msa0214720:CDS | 30.0% | |
| ACTATGAAAGTGATACTTAC+CGG | - | chr2_1:59311658-59311677 | Msa0214720:five_prime_UTR | 30.0% | |
| GATTACTGAATCATCATCTG+AGG | - | chr2_1:59307052-59307071 | Msa0214720:three_prime_UTR | 35.0% | |
| TTATAGAACAATGCTGATGC+TGG | - | chr2_1:59307179-59307198 | Msa0214720:three_prime_UTR | 35.0% | |
| GCTTCAACAAACTGTTACTA+AGG | - | chr2_1:59307271-59307290 | Msa0214720:three_prime_UTR | 35.0% | |
| !! | TGGGTTCATGTATTTTTGCT+TGG | - | chr2_1:59307363-59307382 | Msa0214720:intron | 35.0% |
| !! | ATGCTTTTAACCAGAAGTGT+CGG | + | chr2_1:59307520-59307539 | None:intergenic | 35.0% |
| ! | TCTATTGATTGTTGTGTCTG+CGG | - | chr2_1:59307865-59307884 | Msa0214720:CDS | 35.0% |
| AAATGGAGGAGAATTAGTTG+AGG | - | chr2_1:59307944-59307963 | Msa0214720:CDS | 35.0% | |
| !! | GCTGAAAAGAAAAGCATCAA+GGG | + | chr2_1:59308268-59308287 | None:intergenic | 35.0% |
| !! | AGCTGAAAAGAAAAGCATCA+AGG | + | chr2_1:59308269-59308288 | None:intergenic | 35.0% |
| AGTTTCCAGATATACAGAAC+CGG | - | chr2_1:59308409-59308428 | Msa0214720:intron | 35.0% | |
| TCAATTAAATTGACGCTAGC+AGG | + | chr2_1:59308443-59308462 | None:intergenic | 35.0% | |
| ! | TTTGGGATCGGATATTGATT+TGG | - | chr2_1:59308608-59308627 | Msa0214720:intron | 35.0% |
| GATCAAGCTCTTGAAAATCT+TGG | - | chr2_1:59308634-59308653 | Msa0214720:intron | 35.0% | |
| AAGCTCTTGAAAATCTTGGT+GGG | - | chr2_1:59308638-59308657 | Msa0214720:intron | 35.0% | |
| ! | TTTTGTGAATCGTTTTCCAG+AGG | - | chr2_1:59308749-59308768 | Msa0214720:intron | 35.0% |
| CAGAATTTATTTCCAACCTC+TGG | + | chr2_1:59308768-59308787 | None:intergenic | 35.0% | |
| AGAAACTGGCATCTATGATT+TGG | + | chr2_1:59308809-59308828 | None:intergenic | 35.0% | |
| AGTTAAGAAGTGGAGTGATA+AGG | + | chr2_1:59308979-59308998 | None:intergenic | 35.0% | |
| GAATCATCTCTGATAATCAG+GGG | + | chr2_1:59309034-59309053 | None:intergenic | 35.0% | |
| GTGAATCATCTCTGATAATC+AGG | + | chr2_1:59309036-59309055 | None:intergenic | 35.0% | |
| CAGATGGTGAATTATCTTCA+GGG | - | chr2_1:59309141-59309160 | Msa0214720:CDS | 35.0% | |
| AGAGAATAAGGGTAAGAACA+TGG | + | chr2_1:59309179-59309198 | None:intergenic | 35.0% | |
| TTCTTACCCTTATTCTCTTG+TGG | - | chr2_1:59309181-59309200 | Msa0214720:CDS | 35.0% | |
| TCTTACCCTTATTCTCTTGT+GGG | - | chr2_1:59309182-59309201 | Msa0214720:CDS | 35.0% | |
| ! | GTGGTGTTAAGAAGAAAATG+TGG | - | chr2_1:59309489-59309508 | Msa0214720:CDS | 35.0% |
| GAAAATGTGGAAGAGGTTTA+AGG | - | chr2_1:59309502-59309521 | Msa0214720:CDS | 35.0% | |
| CAAATCGTCTGTAAAGTTGT+TGG | - | chr2_1:59309599-59309618 | Msa0214720:intron | 35.0% | |
| AAATCCTTCAACACAATAGC+TGG | + | chr2_1:59309644-59309663 | None:intergenic | 35.0% | |
| ATATGTGCATGTTTCTTGGT+TGG | - | chr2_1:59309926-59309945 | Msa0214720:intron | 35.0% | |
| TCTGTATTGTATGGTAGTCT+AGG | - | chr2_1:59310027-59310046 | Msa0214720:intron | 35.0% | |
| AGAAATAGTTACGAGATGCA+CGG | - | chr2_1:59310107-59310126 | Msa0214720:intron | 35.0% | |
| TCAATTCAATTGACACTAGC+AGG | + | chr2_1:59310147-59310166 | None:intergenic | 35.0% | |
| ACTTAGTGTTATGTCAGGAA+TGG | - | chr2_1:59310358-59310377 | Msa0214720:intron | 35.0% | |
| CTTAGTGTTATGTCAGGAAT+GGG | - | chr2_1:59310359-59310378 | Msa0214720:intron | 35.0% | |
| TTAGTGTTATGTCAGGAATG+GGG | - | chr2_1:59310360-59310379 | Msa0214720:intron | 35.0% | |
| TAAAGAGTGAAGTGATAAGG+TGG | + | chr2_1:59310407-59310426 | None:intergenic | 35.0% | |
| GGATTATCTTCAACAACTTC+AGG | - | chr2_1:59310572-59310591 | Msa0214720:intron | 35.0% | |
| TATCTTCAACAACTTCAGGA+TGG | - | chr2_1:59310576-59310595 | Msa0214720:intron | 35.0% | |
| ATAAGGGTAAGAACATGGTT+TGG | + | chr2_1:59309174-59309193 | None:intergenic | 35.0% | |
| AGAGAATAAGGGTAAGAACA+TGG | + | chr2_1:59309179-59309198 | None:intergenic | 35.0% | |
| TTCTTACCCTTATTCTCTTG+TGG | - | chr2_1:59309181-59309200 | Msa0214720:CDS | 35.0% | |
| TCTTACCCTTATTCTCTTGT+GGG | - | chr2_1:59309182-59309201 | Msa0214720:CDS | 35.0% | |
| ! | AAAGTGTTTGCTGAAGATGT+TGG | - | chr2_1:59310842-59310861 | Msa0214720:intron | 35.0% |
| ! | GTGGTGTTAAGAAGAAAATG+TGG | - | chr2_1:59309489-59309508 | Msa0214720:CDS | 35.0% |
| GAAAATGTGGAAGAGGTTTA+AGG | - | chr2_1:59309502-59309521 | Msa0214720:CDS | 35.0% | |
| CAAGTCGTCTGTAAAATTGT+TGG | - | chr2_1:59311034-59311053 | Msa0214720:intron | 35.0% | |
| TCGTCTGTAAAATTGTTGGT+TGG | - | chr2_1:59311038-59311057 | Msa0214720:intron | 35.0% | |
| ! | CGTCTGTAAAATTGTTGGTT+GGG | - | chr2_1:59311039-59311058 | Msa0214720:intron | 35.0% |
| GTTACCAACTATTGTGTTGA+AGG | - | chr2_1:59311072-59311091 | Msa0214720:intron | 35.0% | |
| !!! | TATGTTGCGTTGATTTTCAC+AGG | - | chr2_1:59311198-59311217 | Msa0214720:intron | 35.0% |
| !! | ATATACTGCTGTGTTTTTGC+AGG | - | chr2_1:59311336-59311355 | Msa0214720:intron | 35.0% |
| !! | TATACTGCTGTGTTTTTGCA+GGG | - | chr2_1:59311337-59311356 | Msa0214720:intron | 35.0% |
| ACATCCTAATTGTCATCAAC+AGG | + | chr2_1:59311376-59311395 | None:intergenic | 35.0% | |
| GAAAGTGAAGCCAAAATGAA+TGG | - | chr2_1:59311403-59311422 | Msa0214720:intron | 35.0% | |
| CAATATTGTGAAGAACAGCA+TGG | + | chr2_1:59311453-59311472 | None:intergenic | 35.0% | |
| CATGCTGTTCTTCACAATAT+TGG | - | chr2_1:59311451-59311470 | Msa0214720:CDS | 35.0% | |
| TGCTGTTCTTCACAATATTG+GGG | - | chr2_1:59311453-59311472 | Msa0214720:CDS | 35.0% | |
| TCTCTTAGTAGTTAGTGCAA+GGG | + | chr2_1:59311509-59311528 | None:intergenic | 35.0% | |
| ATCTCTTAGTAGTTAGTGCA+AGG | + | chr2_1:59311510-59311529 | None:intergenic | 35.0% | |
| !!! | GCATCGTATTTTGAGATTCA+TGG | + | chr2_1:59311561-59311580 | None:intergenic | 35.0% |
| ACGATGCTTAAAATTGCAAG+TGG | - | chr2_1:59311574-59311593 | Msa0214720:intron | 35.0% | |
| ! | GAGATTACTGACTATGGTTA+CGG | - | chr2_1:59311698-59311717 | Msa0214720:five_prime_UTR | 35.0% |
| !!! | GAAGCTGGTTTTGTGGATTT+GGG | + | chr2_1:59306933-59306952 | None:intergenic | 40.0% |
| !!! | TGAAGCTGGTTTTGTGGATT+TGG | + | chr2_1:59306934-59306953 | None:intergenic | 40.0% |
| !!! | AGAAAGTGAAGCTGGTTTTG+TGG | + | chr2_1:59306940-59306959 | None:intergenic | 40.0% |
| GAGAAATGAGAAAGTGAAGC+TGG | + | chr2_1:59306948-59306967 | None:intergenic | 40.0% | |
| AGAGTTTGAATTGGTGAGGA+AGG | + | chr2_1:59307005-59307024 | None:intergenic | 40.0% | |
| AGTGAGAGTTTGAATTGGTG+AGG | + | chr2_1:59307009-59307028 | None:intergenic | 40.0% | |
| GAGAGAGTGAGAGTTTGAAT+TGG | + | chr2_1:59307014-59307033 | None:intergenic | 40.0% | |
| GAGTTTGGTTATACTCTCTG+TGG | - | chr2_1:59307492-59307511 | Msa0214720:intron | 40.0% | |
| AAGGATGGTGAGATTCAAGA+TGG | - | chr2_1:59307897-59307916 | Msa0214720:CDS | 40.0% | |
| TTGGGTCTGAGTTCAGAAAA+TGG | - | chr2_1:59307927-59307946 | Msa0214720:CDS | 40.0% | |
| !!! | ACATGTTTTGATGTCGGTGT+TGG | - | chr2_1:59308177-59308196 | Msa0214720:intron | 40.0% |
| !! | CGTGTTTGGTGTATACATGT+TGG | + | chr2_1:59308206-59308225 | None:intergenic | 40.0% |
| !! | AAAGAAAAGCATCAAGGGAG+TGG | + | chr2_1:59308263-59308282 | None:intergenic | 40.0% |
| ACAATCCGGTTCTGTATATC+TGG | + | chr2_1:59308417-59308436 | None:intergenic | 40.0% | |
| ! | AAAGACCCAAAAGTGTGAGT+CGG | - | chr2_1:59308514-59308533 | Msa0214720:intron | 40.0% |
| CAAGCTCTTGAAAATCTTGG+TGG | - | chr2_1:59308637-59308656 | Msa0214720:intron | 40.0% | |
| GTCATGAATGTGACAGAAAC+TGG | + | chr2_1:59308823-59308842 | None:intergenic | 40.0% | |
| ATGACTATTATTGGTACGCG+AGG | - | chr2_1:59308838-59308857 | Msa0214720:intron | 40.0% | |
| CTGATAATCAGGGGACATAA+GGG | + | chr2_1:59309025-59309044 | None:intergenic | 40.0% | |
| TCTGATAATCAGGGGACATA+AGG | + | chr2_1:59309026-59309045 | None:intergenic | 40.0% | |
| GTAGGTAACCAATGAATCTG+CGG | - | chr2_1:59309088-59309107 | Msa0214720:CDS | 40.0% | |
| ATCAGAAACCGCAGATTCAT+TGG | + | chr2_1:59309099-59309118 | None:intergenic | 40.0% | |
| TGCGGTTTCTGATGCTAAAT+GGG | - | chr2_1:59309106-59309125 | Msa0214720:CDS | 40.0% | |
| CCTGAAGATAATTCACCATC+TGG | + | chr2_1:59309143-59309162 | None:intergenic | 40.0% | |
| CCAGATGGTGAATTATCTTC+AGG | - | chr2_1:59309140-59309159 | Msa0214720:CDS | 40.0% | |
| ATGGTGAATTATCTTCAGGG+TGG | - | chr2_1:59309144-59309163 | Msa0214720:CDS | 40.0% | |
| CTTACCCTTATTCTCTTGTG+GGG | - | chr2_1:59309183-59309202 | Msa0214720:CDS | 40.0% | |
| TTACCCTTATTCTCTTGTGG+GGG | - | chr2_1:59309184-59309203 | Msa0214720:CDS | 40.0% | |
| TGAAGATGAAGATGAAGAGG+AGG | - | chr2_1:59309313-59309332 | Msa0214720:CDS | 40.0% | |
| GGATGAAAGTGAAGATGAGT+TGG | - | chr2_1:59309340-59309359 | Msa0214720:CDS | 40.0% | |
| AGCATTCCACTACTGTACTA+AGG | - | chr2_1:59309543-59309562 | Msa0214720:CDS | 40.0% | |
| TTTCGTCCTTAGTACAGTAG+TGG | + | chr2_1:59309552-59309571 | None:intergenic | 40.0% | |
| CTACTGTACTAAGGACGAAA+AGG | - | chr2_1:59309552-59309571 | Msa0214720:CDS | 40.0% | |
| TCGTCTGTAAAGTTGTTGGT+TGG | - | chr2_1:59309603-59309622 | Msa0214720:intron | 40.0% | |
| ! | CGTCTGTAAAGTTGTTGGTT+GGG | - | chr2_1:59309604-59309623 | Msa0214720:intron | 40.0% |
| GTTACCAGCTATTGTGTTGA+AGG | - | chr2_1:59309637-59309656 | Msa0214720:intron | 40.0% | |
| !! | TGATTTTTGCAGGTTGAACC+CGG | - | chr2_1:59309776-59309795 | Msa0214720:intron | 40.0% |
| !! | TGACAAGAAAAGCATCAAGG+CGG | + | chr2_1:59309978-59309997 | None:intergenic | 40.0% |
| !! | AGCTGACAAGAAAAGCATCA+AGG | + | chr2_1:59309981-59310000 | None:intergenic | 40.0% |
| TTTGCAAATTGGAATTGCCG+AGG | - | chr2_1:59310231-59310250 | Msa0214720:intron | 40.0% | |
| ! | GTATGCTAGCTTAGAAGTCT+CGG | - | chr2_1:59310280-59310299 | Msa0214720:intron | 40.0% |
| ATAAGGGTGACATTGTGGTT+AGG | + | chr2_1:59310439-59310458 | None:intergenic | 40.0% | |
| GTAGGTAACTCATGAATCTG+TGG | - | chr2_1:59310511-59310530 | Msa0214720:intron | 40.0% | |
| TGTGGTTTCTGATGCTGAAT+GGG | - | chr2_1:59310529-59310548 | Msa0214720:intron | 40.0% | |
| GTTGAAGATAATCCACCATC+AGG | + | chr2_1:59310566-59310585 | None:intergenic | 40.0% | |
| !! | AGAACATGGTTTGGTGTTGA+AGG | + | chr2_1:59310606-59310625 | None:intergenic | 40.0% |
| CTTACCCTTATTCTCTTGTG+GGG | - | chr2_1:59309183-59309202 | Msa0214720:CDS | 40.0% | |
| ATCACTGTCAGAACCAACTT+CGG | + | chr2_1:59310723-59310742 | None:intergenic | 40.0% | |
| TGAAGATGAAGATGAGGATG+AGG | - | chr2_1:59310754-59310773 | Msa0214720:CDS | 40.0% | |
| GATGAAGGTGAAGATGAGTT+TGG | - | chr2_1:59310776-59310795 | Msa0214720:CDS | 40.0% | |
| AGCATTCAACTGCTGTACTA+AGG | - | chr2_1:59310978-59310997 | Msa0214720:intron | 40.0% | |
| TGTTCTTCACAATATTGGGG+AGG | - | chr2_1:59311456-59311475 | Msa0214720:CDS | 40.0% | |
| ATGAAAGTGATACTTACCGG+TGG | - | chr2_1:59311661-59311680 | Msa0214720:five_prime_UTR | 40.0% | |
| TGAAAGTGATACTTACCGGT+GGG | - | chr2_1:59311662-59311681 | Msa0214720:five_prime_UTR | 40.0% | |
| !! | GAATTGGTGAGGAAGGTGTT+AGG | + | chr2_1:59306998-59307017 | None:intergenic | 45.0% |
| TTCAGTTCCAGTTGAGCTTC+AGG | - | chr2_1:59307235-59307254 | Msa0214720:three_prime_UTR | 45.0% | |
| GTGTCTGCGGAATTGTTTGA+AGG | - | chr2_1:59307878-59307897 | Msa0214720:CDS | 45.0% | |
| CTGCGGAATTGTTTGAAGGA+TGG | - | chr2_1:59307882-59307901 | Msa0214720:CDS | 45.0% | |
| GGTCTGAGTTCAGAAAATGG+AGG | - | chr2_1:59307930-59307949 | Msa0214720:CDS | 45.0% | |
| !! | CTACCTATGAAGCACTGACA+CGG | - | chr2_1:59308086-59308105 | Msa0214720:CDS | 45.0% |
| CACAGTGTCTGTGTCATGTA+TGG | + | chr2_1:59308115-59308134 | None:intergenic | 45.0% | |
| !! | CTTTTGATGGTAGGCGTGTT+TGG | + | chr2_1:59308220-59308239 | None:intergenic | 45.0% |
| ! | ACGCCTACCATCAAAAGTGT+CGG | - | chr2_1:59308223-59308242 | Msa0214720:intron | 45.0% |
| !!! | TGTAGCACCGACACTTTTGA+TGG | + | chr2_1:59308233-59308252 | None:intergenic | 45.0% |
| ACGCTAGCAGGATAACAATC+CGG | + | chr2_1:59308431-59308450 | None:intergenic | 45.0% | |
| !!! | CGATACCGACTCACACTTTT+GGG | + | chr2_1:59308522-59308541 | None:intergenic | 45.0% |
| ! | CCAAAAGTGTGAGTCGGTAT+CGG | - | chr2_1:59308520-59308539 | Msa0214720:intron | 45.0% |
| ! | GTGAATCGTTTTCCAGAGGT+TGG | - | chr2_1:59308753-59308772 | Msa0214720:intron | 45.0% |
| ATAATCAGGGGACATAAGGG+TGG | + | chr2_1:59309022-59309041 | None:intergenic | 45.0% | |
| CTGCGGTTTCTGATGCTAAA+TGG | - | chr2_1:59309105-59309124 | Msa0214720:CDS | 45.0% | |
| TGGGTTTGCAAAAGTCCAGA+TGG | - | chr2_1:59309125-59309144 | Msa0214720:CDS | 45.0% | |
| CATCCCCCACAAGAGAATAA+GGG | + | chr2_1:59309190-59309209 | None:intergenic | 45.0% | |
| TCATCCCCCACAAGAGAATA+AGG | + | chr2_1:59309191-59309210 | None:intergenic | 45.0% | |
| TTATTCTCTTGTGGGGGATG+AGG | - | chr2_1:59309190-59309209 | Msa0214720:CDS | 45.0% | |
| ! | CATCGGGAGCTAAGAACTTT+TGG | + | chr2_1:59309265-59309284 | None:intergenic | 45.0% |
| AAGTTCTTAGCTCCCGATGT+TGG | - | chr2_1:59309266-59309285 | Msa0214720:CDS | 45.0% | |
| ATCGCTGTCAGAACCAACAT+CGG | + | chr2_1:59309282-59309301 | None:intergenic | 45.0% | |
| TGAAGATGAAGAGGAGGATG+AGG | - | chr2_1:59309319-59309338 | Msa0214720:CDS | 45.0% | |
| ! | AAAGTGTTCGCTGAAGATGC+TGG | - | chr2_1:59309407-59309426 | Msa0214720:CDS | 45.0% |
| TTATGTCAGGAATGGGGAAC+TGG | - | chr2_1:59310366-59310385 | Msa0214720:intron | 45.0% | |
| TATGTCAGGAATGGGGAACT+GGG | - | chr2_1:59310367-59310386 | Msa0214720:intron | 45.0% | |
| TGAAGTGATAAGGTGGTCGA+GGG | + | chr2_1:59310400-59310419 | None:intergenic | 45.0% | |
| GGGATATAAGGGTGACATTG+TGG | + | chr2_1:59310444-59310463 | None:intergenic | 45.0% | |
| CTGTGGTTTCTGATGCTGAA+TGG | - | chr2_1:59310528-59310547 | Msa0214720:intron | 45.0% | |
| TGGGTTTGCAAAAGTCCTGA+TGG | - | chr2_1:59310548-59310567 | Msa0214720:intron | 45.0% | |
| GTTTGCAAAAGTCCTGATGG+TGG | - | chr2_1:59310551-59310570 | Msa0214720:intron | 45.0% | |
| TTCAACAACTTCAGGATGGC+CGG | - | chr2_1:59310580-59310599 | Msa0214720:intron | 45.0% | |
| CGTTCCCCACAAGAGAATAA+GGG | + | chr2_1:59310631-59310650 | None:intergenic | 45.0% | |
| TCGTTCCCCACAAGAGAATA+AGG | + | chr2_1:59310632-59310651 | None:intergenic | 45.0% | |
| TTATTCTCTTGTGGGGAACG+AGG | - | chr2_1:59310631-59310650 | Msa0214720:intron | 45.0% | |
| ! | CTTCGGGAGCTAAGAACTTT+TGG | + | chr2_1:59310706-59310725 | None:intergenic | 45.0% |
| AAGTTCTTAGCTCCCGAAGT+TGG | - | chr2_1:59310707-59310726 | Msa0214720:intron | 45.0% | |
| TCACTGTCAGAACCAACTTC+GGG | + | chr2_1:59310722-59310741 | None:intergenic | 45.0% | |
| !! | AGTTGGTTCTGACAGTGATG+AGG | - | chr2_1:59310724-59310743 | Msa0214720:intron | 45.0% |
| GAAGATGAGGATGAGGATGA+AGG | - | chr2_1:59310761-59310780 | Msa0214720:CDS | 45.0% | |
| !! | TTGCTGAAGATGTTGGCTTG+AGG | - | chr2_1:59310849-59310868 | Msa0214720:intron | 45.0% |
| !! | TGCTGAAGATGTTGGCTTGA+GGG | - | chr2_1:59310850-59310869 | Msa0214720:intron | 45.0% |
| CTGCTGTACTAAGGACGAAA+AGG | - | chr2_1:59310987-59311006 | Msa0214720:intron | 45.0% | |
| TTGATTCCTCAGCAGCTTCA+AGG | - | chr2_1:59311098-59311117 | Msa0214720:intron | 45.0% | |
| ! | AGCAGCTTCAAGGAAGCTTT+TGG | - | chr2_1:59311108-59311127 | Msa0214720:intron | 45.0% |
| ! | AGGAGCTTGTTTGCAGTCTT+AGG | - | chr2_1:59311476-59311495 | Msa0214720:CDS | 45.0% |
| ! | CACGGTGAGATTACTGACTA+TGG | - | chr2_1:59311692-59311711 | Msa0214720:five_prime_UTR | 45.0% |
| GCATGATCCTGAAGCTCAAC+TGG | + | chr2_1:59307245-59307264 | None:intergenic | 50.0% | |
| TCACGTGTCAGTGTTGTGTC+TGG | - | chr2_1:59307606-59307625 | Msa0214720:CDS | 50.0% | |
| GTCAGTGTTGTGTCTGGTGT+TGG | - | chr2_1:59307612-59307631 | Msa0214720:CDS | 50.0% | |
| TCTCCGTGTCAGTGCTTCAT+AGG | + | chr2_1:59308092-59308111 | None:intergenic | 50.0% | |
| TGACACAGACACTGTGACAC+CGG | - | chr2_1:59308119-59308138 | Msa0214720:CDS | 50.0% | |
| !! | GCACCGACACTTTTGATGGT+AGG | + | chr2_1:59308229-59308248 | None:intergenic | 50.0% |
| !!! | CCGATACCGACTCACACTTT+TGG | + | chr2_1:59308523-59308542 | None:intergenic | 50.0% |
| ATAAGGGTGGCTTCGTGGTT+GGG | + | chr2_1:59309009-59309028 | None:intergenic | 50.0% | |
| GGGGGATGAGGAAGCAATTA+TGG | - | chr2_1:59309202-59309221 | Msa0214720:CDS | 50.0% | |
| TCGCTGTCAGAACCAACATC+GGG | + | chr2_1:59309281-59309300 | None:intergenic | 50.0% | |
| GAAAAGGATGCGAGCTCACA+GGG | - | chr2_1:59309568-59309587 | Msa0214720:CDS | 50.0% | |
| ATTCCTCCTCAACAGCTTCG+AGG | - | chr2_1:59309666-59309685 | Msa0214720:intron | 50.0% | |
| TTCCTCCTCAACAGCTTCGA+GGG | - | chr2_1:59309667-59309686 | Msa0214720:intron | 50.0% | |
| ! | AACAGCTTCGAGGGAGCTTT+TGG | - | chr2_1:59309676-59309695 | Msa0214720:intron | 50.0% |
| ATGTCAGGAATGGGGAACTG+GGG | - | chr2_1:59310368-59310387 | Msa0214720:intron | 50.0% | |
| GTGAAGTGATAAGGTGGTCG+AGG | + | chr2_1:59310401-59310420 | None:intergenic | 50.0% | |
| GGGTGACATTGTGGTTAGGA+CGG | + | chr2_1:59310435-59310454 | None:intergenic | 50.0% | |
| !! | CATGGTTTGGTGTTGAAGGC+CGG | + | chr2_1:59310602-59310621 | None:intergenic | 50.0% |
| GAAAAGGAAGCGAGCTCACA+GGG | - | chr2_1:59311003-59311022 | Msa0214720:intron | 50.0% | |
| AAGCTTCCTTGAAGCTGCTG+AGG | + | chr2_1:59311107-59311126 | None:intergenic | 50.0% | |
| TAAGGGTGGCTTCGTGGTTG+GGG | + | chr2_1:59309008-59309027 | None:intergenic | 55.0% | |
| CATAAGGGTGGCTTCGTGGT+TGG | + | chr2_1:59309010-59309029 | None:intergenic | 55.0% | |
| !! | TCGCTGAAGATGCTGGCTTG+AGG | - | chr2_1:59309414-59309433 | Msa0214720:CDS | 55.0% |
| CGAAAAGGATGCGAGCTCAC+AGG | - | chr2_1:59309567-59309586 | Msa0214720:CDS | 55.0% | |
| AAGCTCCCTCGAAGCTGTTG+AGG | + | chr2_1:59309675-59309694 | None:intergenic | 55.0% | |
| ! | ACTCGCAGCAGCAGGTTTTC+CGG | + | chr2_1:59309798-59309817 | None:intergenic | 55.0% |
| TCAACATCACTCGCAGCAGC+AGG | + | chr2_1:59309806-59309825 | None:intergenic | 55.0% | |
| CGAAAAGGAAGCGAGCTCAC+AGG | - | chr2_1:59311002-59311021 | Msa0214720:intron | 55.0% | |
| ATTCGCAGCCGCAGGTTTCT+CGG | + | chr2_1:59311230-59311249 | None:intergenic | 55.0% | |
| TCAACATCATTCGCAGCCGC+AGG | + | chr2_1:59311238-59311257 | None:intergenic | 55.0% | |
| TTACCGGTGGGAATGCGACA+CGG | - | chr2_1:59311674-59311693 | Msa0214720:five_prime_UTR | 55.0% | |
| !! | CTCTGTGGCACCGACACTTC+TGG | - | chr2_1:59307507-59307526 | Msa0214720:intron | 60.0% |
| GGGACATAAGGGTGGCTTCG+TGG | + | chr2_1:59309014-59309033 | None:intergenic | 60.0% | |
| CTCCCTCGAAGCTGTTGAGG+AGG | + | chr2_1:59309672-59309691 | None:intergenic | 60.0% | |
| ! | CTCGCAGCAGCAGGTTTTCC+GGG | + | chr2_1:59309797-59309816 | None:intergenic | 60.0% |
| GGCTGAACCCGAGAAACCTG+CGG | - | chr2_1:59311219-59311238 | Msa0214720:intron | 60.0% | |
| TTCGCAGCCGCAGGTTTCTC+GGG | + | chr2_1:59311229-59311248 | None:intergenic | 60.0% | |
| TCACCGTGTCGCATTCCCAC+CGG | + | chr2_1:59311680-59311699 | None:intergenic | 60.0% | |
| GGGGCGGGGGAGTTAAGAAG+TGG | + | chr2_1:59308989-59309008 | None:intergenic | 65.0% | |
| TGGCTTCGTGGTTGGGGCGG+GGG | + | chr2_1:59309002-59309021 | None:intergenic | 70.0% | |
| GTGGCTTCGTGGTTGGGGCG+GGG | + | chr2_1:59309003-59309022 | None:intergenic | 70.0% | |
| GGTGGCTTCGTGGTTGGGGC+GGG | + | chr2_1:59309004-59309023 | None:intergenic | 70.0% | |
| GGGTGGCTTCGTGGTTGGGG+CGG | + | chr2_1:59309005-59309024 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_1 | gene | 59306929 | 59311767 | 59306929 | ID=Msa0214720;Name=Msa0214720 |
| chr2_1 | mRNA | 59306929 | 59311767 | 59306929 | ID=Msa0214720-mRNA-1;Parent=Msa0214720;Name=Msa0214720-mRNA-1;_AED=0.11;_eAED=0.11;_QI=118|1|0.87|1|1|1|8|377|516 |
| chr2_1 | exon | 59306929 | 59307338 | 59306929 | ID=Msa0214720-mRNA-1:exon:16345;Parent=Msa0214720-mRNA-1 |
| chr2_1 | exon | 59307429 | 59307476 | 59307429 | ID=Msa0214720-mRNA-1:exon:16344;Parent=Msa0214720-mRNA-1 |
| chr2_1 | exon | 59307567 | 59308181 | 59307567 | ID=Msa0214720-mRNA-1:exon:16343;Parent=Msa0214720-mRNA-1 |
| chr2_1 | exon | 59308861 | 59308908 | 59308861 | ID=Msa0214720-mRNA-1:exon:16342;Parent=Msa0214720-mRNA-1 |
| chr2_1 | exon | 59308999 | 59309604 | 59308999 | ID=Msa0214720-mRNA-1:exon:16341;Parent=Msa0214720-mRNA-1 |
| chr2_1 | exon | 59310731 | 59310796 | 59310731 | ID=Msa0214720-mRNA-1:exon:16340;Parent=Msa0214720-mRNA-1 |
| chr2_1 | exon | 59311404 | 59311511 | 59311404 | ID=Msa0214720-mRNA-1:exon:16339;Parent=Msa0214720-mRNA-1 |
| chr2_1 | exon | 59311623 | 59311767 | 59311623 | ID=Msa0214720-mRNA-1:exon:16338;Parent=Msa0214720-mRNA-1 |
| chr2_1 | five_prime_UTR | 59311650 | 59311767 | 59311650 | ID=Msa0214720-mRNA-1:five_prime_utr;Parent=Msa0214720-mRNA-1 |
| chr2_1 | CDS | 59311623 | 59311649 | 59311623 | ID=Msa0214720-mRNA-1:cds;Parent=Msa0214720-mRNA-1 |
| chr2_1 | CDS | 59311404 | 59311511 | 59311404 | ID=Msa0214720-mRNA-1:cds;Parent=Msa0214720-mRNA-1 |
| chr2_1 | CDS | 59310731 | 59310796 | 59310731 | ID=Msa0214720-mRNA-1:cds;Parent=Msa0214720-mRNA-1 |
| chr2_1 | CDS | 59308999 | 59309604 | 59308999 | ID=Msa0214720-mRNA-1:cds;Parent=Msa0214720-mRNA-1 |
| chr2_1 | CDS | 59308861 | 59308908 | 59308861 | ID=Msa0214720-mRNA-1:cds;Parent=Msa0214720-mRNA-1 |
| chr2_1 | CDS | 59307567 | 59308181 | 59307567 | ID=Msa0214720-mRNA-1:cds;Parent=Msa0214720-mRNA-1 |
| chr2_1 | CDS | 59307429 | 59307476 | 59307429 | ID=Msa0214720-mRNA-1:cds;Parent=Msa0214720-mRNA-1 |
| chr2_1 | CDS | 59307306 | 59307338 | 59307306 | ID=Msa0214720-mRNA-1:cds;Parent=Msa0214720-mRNA-1 |
| chr2_1 | three_prime_UTR | 59306929 | 59307305 | 59306929 | ID=Msa0214720-mRNA-1:three_prime_utr;Parent=Msa0214720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
